@cornerstonejs/tools 2.0.0-beta.1 → 2.0.0-beta.3

package/dist/esm/tools/index.d.ts

@@ -1,4 +1,4 @@
-import { BaseTool, AnnotationTool } from './base';
+import { BaseTool, AnnotationTool, AnnotationDisplayTool } from './base';
 import PanTool from './PanTool';
 import TrackballRotateTool from './TrackballRotateTool';
 import WindowLevelTool from './WindowLevelTool';
@@ -10,7 +10,9 @@ import VolumeRotateMouseWheelTool from './VolumeRotateMouseWheelTool';
 import MIPJumpToClickTool from './MIPJumpToClickTool';
 import CrosshairsTool from './CrosshairsTool';
 import MagnifyTool from './MagnifyTool';
+import AdvancedMagnifyTool from './AdvancedMagnifyTool';
 import ReferenceLinesTool from './ReferenceLinesTool';
+import OverlayGridTool from './OverlayGridTool';
 import BidirectionalTool from './annotation/BidirectionalTool';
 import LengthTool from './annotation/LengthTool';
 import ProbeTool from './annotation/ProbeTool';
@@ -33,4 +35,5 @@ import RectangleROIThresholdTool from './segmentation/RectangleROIThresholdTool'
 import RectangleROIStartEndThresholdTool from './segmentation/RectangleROIStartEndThresholdTool';
 import BrushTool from './segmentation/BrushTool';
 import PaintFillTool from './segmentation/PaintFillTool';
-export { BaseTool, AnnotationTool, PanTool, TrackballRotateTool, DragProbeTool, WindowLevelTool, StackScrollTool, PlanarRotateTool, StackScrollMouseWheelTool, ZoomTool, VolumeRotateMouseWheelTool, MIPJumpToClickTool, CrosshairsTool, ReferenceLinesTool, BidirectionalTool, LengthTool, ProbeTool, RectangleROITool, EllipticalROITool, CircleROITool, PlanarFreehandROITool, ArrowAnnotateTool, AngleTool, CobbAngleTool, ReferenceCursors, SegmentationDisplayTool, RectangleScissorsTool, CircleScissorsTool, SphereScissorsTool, RectangleROIThresholdTool, RectangleROIStartEndThresholdTool, BrushTool, MagnifyTool, ReferenceLines, PaintFillTool, ScaleOverlayTool, };
+import OrientationMarkerTool from './OrientationMarkerTool';
+export { BaseTool, AnnotationTool, AnnotationDisplayTool, PanTool, TrackballRotateTool, DragProbeTool, WindowLevelTool, StackScrollTool, PlanarRotateTool, StackScrollMouseWheelTool, ZoomTool, VolumeRotateMouseWheelTool, MIPJumpToClickTool, CrosshairsTool, ReferenceLinesTool, OverlayGridTool, BidirectionalTool, LengthTool, ProbeTool, RectangleROITool, EllipticalROITool, CircleROITool, PlanarFreehandROITool, ArrowAnnotateTool, AngleTool, CobbAngleTool, ReferenceCursors, SegmentationDisplayTool, RectangleScissorsTool, CircleScissorsTool, SphereScissorsTool, RectangleROIThresholdTool, RectangleROIStartEndThresholdTool, BrushTool, MagnifyTool, AdvancedMagnifyTool, ReferenceLines, PaintFillTool, ScaleOverlayTool, OrientationMarkerTool, };

package/dist/esm/tools/index.js

@@ -1,4 +1,4 @@
-import { BaseTool, AnnotationTool } from './base';
+import { BaseTool, AnnotationTool, AnnotationDisplayTool } from './base';
 import PanTool from './PanTool';
 import TrackballRotateTool from './TrackballRotateTool';
 import WindowLevelTool from './WindowLevelTool';
@@ -10,7 +10,9 @@ import VolumeRotateMouseWheelTool from './VolumeRotateMouseWheelTool';
 import MIPJumpToClickTool from './MIPJumpToClickTool';
 import CrosshairsTool from './CrosshairsTool';
 import MagnifyTool from './MagnifyTool';
+import AdvancedMagnifyTool from './AdvancedMagnifyTool';
 import ReferenceLinesTool from './ReferenceLinesTool';
+import OverlayGridTool from './OverlayGridTool';
 import BidirectionalTool from './annotation/BidirectionalTool';
 import LengthTool from './annotation/LengthTool';
 import ProbeTool from './annotation/ProbeTool';
@@ -33,5 +35,6 @@ import RectangleROIThresholdTool from './segmentation/RectangleROIThresholdTool'
 import RectangleROIStartEndThresholdTool from './segmentation/RectangleROIStartEndThresholdTool';
 import BrushTool from './segmentation/BrushTool';
 import PaintFillTool from './segmentation/PaintFillTool';
-export { BaseTool, AnnotationTool, PanTool, TrackballRotateTool, DragProbeTool, WindowLevelTool, StackScrollTool, PlanarRotateTool, StackScrollMouseWheelTool, ZoomTool, VolumeRotateMouseWheelTool, MIPJumpToClickTool, CrosshairsTool, ReferenceLinesTool, BidirectionalTool, LengthTool, ProbeTool, RectangleROITool, EllipticalROITool, CircleROITool, PlanarFreehandROITool, ArrowAnnotateTool, AngleTool, CobbAngleTool, ReferenceCursors, SegmentationDisplayTool, RectangleScissorsTool, CircleScissorsTool, SphereScissorsTool, RectangleROIThresholdTool, RectangleROIStartEndThresholdTool, BrushTool, MagnifyTool, ReferenceLines, PaintFillTool, ScaleOverlayTool, };
+import OrientationMarkerTool from './OrientationMarkerTool';
+export { BaseTool, AnnotationTool, AnnotationDisplayTool, PanTool, TrackballRotateTool, DragProbeTool, WindowLevelTool, StackScrollTool, PlanarRotateTool, StackScrollMouseWheelTool, ZoomTool, VolumeRotateMouseWheelTool, MIPJumpToClickTool, CrosshairsTool, ReferenceLinesTool, OverlayGridTool, BidirectionalTool, LengthTool, ProbeTool, RectangleROITool, EllipticalROITool, CircleROITool, PlanarFreehandROITool, ArrowAnnotateTool, AngleTool, CobbAngleTool, ReferenceCursors, SegmentationDisplayTool, RectangleScissorsTool, CircleScissorsTool, SphereScissorsTool, RectangleROIThresholdTool, RectangleROIStartEndThresholdTool, BrushTool, MagnifyTool, AdvancedMagnifyTool, ReferenceLines, PaintFillTool, ScaleOverlayTool, OrientationMarkerTool, };
 //# sourceMappingURL=index.js.map

package/dist/esm/tools/index.js.map

@@ -1 +1 @@
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package/dist/esm/tools/segmentation/BrushTool.js

@@ -1,6 +1,7 @@
 import { cache, getEnabledElement, StackViewport } from '@cornerstonejs/core';
+import { vec3 } from 'gl-matrix';
 import { BaseTool } from '../base';
-import { fillInsideSphere } from './strategies/fillSphere';
+import { fillInsideSphere, thresholdInsideSphere, } from './strategies/fillSphere';
 import { eraseInsideSphere } from './strategies/eraseSphere';
 import { thresholdInsideCircle, fillInsideCircle, } from './strategies/fillCircle';
 import { eraseInsideCircle } from './strategies/eraseCircle';
@@ -15,10 +16,11 @@ class BrushTool extends BaseTool {
         configuration: {
             strategies: {
                 FILL_INSIDE_CIRCLE: fillInsideCircle,
-                THRESHOLD_INSIDE_CIRCLE: thresholdInsideCircle,
                 ERASE_INSIDE_CIRCLE: eraseInsideCircle,
                 FILL_INSIDE_SPHERE: fillInsideSphere,
                 ERASE_INSIDE_SPHERE: eraseInsideSphere,
+                THRESHOLD_INSIDE_CIRCLE: thresholdInsideCircle,
+                THRESHOLD_INSIDE_SPHERE: thresholdInsideSphere,
             },
             strategySpecificConfiguration: {
                 THRESHOLD_INSIDE_CIRCLE: {
@@ -195,31 +197,36 @@ class BrushTool extends BaseTool {
         const enabledElement = getEnabledElement(element);
         const { viewport } = enabledElement;
         const { canvasToWorld } = viewport;
+        const camera = viewport.getCamera();
         const { brushSize } = this.configuration;
-        const radius = brushSize;
-        const bottomCanvas = [
+        const viewUp = vec3.fromValues(camera.viewUp[0], camera.viewUp[1], camera.viewUp[2]);
+        const viewPlaneNormal = vec3.fromValues(camera.viewPlaneNormal[0], camera.viewPlaneNormal[1], camera.viewPlaneNormal[2]);
+        const viewRight = vec3.create();
+        vec3.cross(viewRight, viewUp, viewPlaneNormal);
+        const centerCursorInWorld = canvasToWorld([
             centerCanvas[0],
-            centerCanvas[1] + radius,
-        ];
-        const topCanvas = [centerCanvas[0], centerCanvas[1] - radius];
-        const leftCanvas = [
-            centerCanvas[0] - radius,
             centerCanvas[1],
-        ];
-        const rightCanvas = [
-            centerCanvas[0] + radius,
-            centerCanvas[1],
-        ];
+        ]);
+        const bottomCursorInWorld = vec3.create();
+        const topCursorInWorld = vec3.create();
+        const leftCursorInWorld = vec3.create();
+        const rightCursorInWorld = vec3.create();
+        for (let i = 0; i <= 2; i++) {
+            bottomCursorInWorld[i] = centerCursorInWorld[i] - viewUp[i] * brushSize;
+            topCursorInWorld[i] = centerCursorInWorld[i] + viewUp[i] * brushSize;
+            leftCursorInWorld[i] = centerCursorInWorld[i] - viewRight[i] * brushSize;
+            rightCursorInWorld[i] = centerCursorInWorld[i] + viewRight[i] * brushSize;
+        }
         const { brushCursor } = this._hoverData;
         const { data } = brushCursor;
         if (data.handles === undefined) {
             data.handles = {};
         }
         data.handles.points = [
-            canvasToWorld(bottomCanvas),
-            canvasToWorld(topCanvas),
-            canvasToWorld(leftCanvas),
-            canvasToWorld(rightCanvas),
+            bottomCursorInWorld,
+            topCursorInWorld,
+            leftCursorInWorld,
+            rightCursorInWorld,
         ];
         data.invalidated = false;
     }

package/dist/esm/tools/segmentation/BrushTool.js.map

@@ -1 +1 @@
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package/dist/esm/tools/segmentation/PaintFillTool.js

@@ -69,10 +69,12 @@ class PaintFillTool extends BaseTool {
             let maxJ = -Infinity;
             for (let b = 0; b < boundaries.length; b++) {
                 const j = boundaries[b][1];
-                if (j < minJ)
+                if (j < minJ) {
                     minJ = j;
-                if (j > maxJ)
+                }
+                if (j > maxJ) {
                     maxJ = j;
+                }
             }
             const framesModified = [];
             for (let frame = minJ; frame <= maxJ; frame++) {

package/dist/esm/tools/segmentation/PaintFillTool.js.map

@@ -1 +1 @@
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package/dist/esm/tools/segmentation/strategies/eraseSphere.d.ts

@@ -1,6 +1,7 @@
 import type { Types } from '@cornerstonejs/core';
 declare type OperationData = {
     points: [Types.Point3, Types.Point3, Types.Point3, Types.Point3];
+    imageVolume: Types.IImageVolume;
     volume: Types.IImageVolume;
     segmentIndex: number;
     segmentationId: string;
@@ -8,6 +9,7 @@ declare type OperationData = {
     viewPlaneNormal: Types.Point3;
     viewUp: Types.Point3;
     constraintFn: () => boolean;
+    strategySpecificConfiguration: any;
 };
 export declare function eraseInsideSphere(enabledElement: Types.IEnabledElement, operationData: OperationData): void;
 export {};

package/dist/esm/tools/segmentation/strategies/eraseSphere.js.map

@@ -1 +1 @@
-{"version":3,"file":"eraseSphere.js","sourceRoot":"","sources":["../../../../../src/tools/segmentation/strategies/eraseSphere.ts"],"names":[],"mappings":"AAEA,OAAO,EAAE,gBAAgB,EAAE,MAAM,cAAc,CAAC;AAahD,MAAM,UAAU,iBAAiB,CAC/B,cAAqC,EACrC,aAA4B;IAI5B,MAAM,kBAAkB,GAAG,MAAM,CAAC,MAAM,CAAC,EAAE,EAAE,aAAa,EAAE;QAC1D,YAAY,EAAE,CAAC;KAChB,CAAC,CAAC;IAEH,gBAAgB,CAAC,cAAc,EAAE,kBAAkB,CAAC,CAAC;AACvD,CAAC"}
+{"version":3,"file":"eraseSphere.js","sourceRoot":"","sources":["../../../../../src/tools/segmentation/strategies/eraseSphere.ts"],"names":[],"mappings":"AAEA,OAAO,EAAE,gBAAgB,EAAE,MAAM,cAAc,CAAC;AAehD,MAAM,UAAU,iBAAiB,CAC/B,cAAqC,EACrC,aAA4B;IAI5B,MAAM,kBAAkB,GAAG,MAAM,CAAC,MAAM,CAAC,EAAE,EAAE,aAAa,EAAE;QAC1D,YAAY,EAAE,CAAC;KAChB,CAAC,CAAC;IAEH,gBAAgB,CAAC,cAAc,EAAE,kBAAkB,CAAC,CAAC;AACvD,CAAC"}

package/dist/esm/tools/segmentation/strategies/fillCircle.js

@@ -4,6 +4,7 @@ import { getCanvasEllipseCorners, pointInEllipse, } from '../../../utilities/mat
 import { getBoundingBoxAroundShape } from '../../../utilities/boundingBox';
 import { triggerSegmentationDataModified } from '../../../stateManagement/segmentation/triggerSegmentationEvents';
 import { pointInShapeCallback } from '../../../utilities';
+import isWithinThreshold from './utils/isWithinThreshold';
 const { transformWorldToIndex } = csUtils;
 function fillCircle(enabledElement, operationData, threshold = false) {
     const { volume: segmentationVolume, imageVolume, points, segmentsLocked, segmentIndex, segmentationId, strategySpecificConfiguration, } = operationData;
@@ -56,12 +57,6 @@ function fillCircle(enabledElement, operationData, threshold = false) {
     const arrayOfSlices = Array.from(modifiedSlicesToUse);
     triggerSegmentationDataModified(segmentationId, arrayOfSlices);
 }
-function isWithinThreshold(index, imageVolume, strategySpecificConfiguration) {
-    const { THRESHOLD_INSIDE_CIRCLE } = strategySpecificConfiguration;
-    const voxelValue = imageVolume.getScalarData()[index];
-    const { threshold } = THRESHOLD_INSIDE_CIRCLE;
-    return threshold[0] <= voxelValue && voxelValue <= threshold[1];
-}
 export function fillInsideCircle(enabledElement, operationData) {
     fillCircle(enabledElement, operationData, false);
 }

package/dist/esm/tools/segmentation/strategies/fillCircle.js.map

@@ -1 +1 @@
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+{"version":3,"file":"fillCircle.js","sourceRoot":"","sources":["../../../../../src/tools/segmentation/strategies/fillCircle.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,IAAI,EAAE,MAAM,WAAW,CAAC;AAEjC,OAAO,EAAE,SAAS,IAAI,OAAO,EAAE,MAAM,qBAAqB,CAAC;AAE3D,OAAO,EACL,uBAAuB,EACvB,cAAc,GACf,MAAM,iCAAiC,CAAC;AACzC,OAAO,EAAE,yBAAyB,EAAE,MAAM,gCAAgC,CAAC;AAC3E,OAAO,EAAE,+BAA+B,EAAE,MAAM,iEAAiE,CAAC;AAClH,OAAO,EAAE,oBAAoB,EAAE,MAAM,oBAAoB,CAAC;AAC1D,OAAO,iBAAiB,MAAM,2BAA2B,CAAC;AAE1D,MAAM,EAAE,qBAAqB,EAAE,GAAG,OAAO,CAAC;AAe1C,SAAS,UAAU,CACjB,cAAqC,EACrC,aAA4B,EAC5B,SAAS,GAAG,KAAK;IAEjB,MAAM,EACJ,MAAM,EAAE,kBAAkB,EAC1B,WAAW,EACX,MAAM,EACN,cAAc,EACd,YAAY,EACZ,cAAc,EACd,6BAA6B,GAC9B,GAAG,aAAa,CAAC;IAClB,MAAM,EAAE,SAAS,EAAE,UAAU,EAAE,GAAG,kBAAkB,CAAC;IACrD,MAAM,UAAU,GAAG,kBAAkB,CAAC,aAAa,EAAE,CAAC;IACtD,MAAM,EAAE,QAAQ,EAAE,GAAG,cAAc,CAAC;IAGpC,MAAM,MAAM,GAAG,IAAI,CAAC,UAAU,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC,CAAC;IACxC,MAAM,CAAC,OAAO,CAAC,CAAC,KAAK,EAAE,EAAE;QACvB,IAAI,CAAC,GAAG,CAAC,MAAM,EAAE,MAAM,EAAE,KAAK,CAAC,CAAC;IAClC,CAAC,CAAC,CAAC;IACH,IAAI,CAAC,KAAK,CAAC,MAAM,EAAE,MAAM,EAAE,CAAC,GAAG,MAAM,CAAC,MAAM,CAAC,CAAC;IAE9C,MAAM,iBAAiB,GAAG,MAAM,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,QAAQ,CAAC,aAAa,CAAC,CAAC,CAAC,CAAC,CAAC;IAIvE,MAAM,CAAC,aAAa,EAAE,iBAAiB,CAAC,GACtC,uBAAuB,CAAC,iBAAiB,CAAC,CAAC;IAG7C,MAAM,YAAY,GAAG,QAAQ,CAAC,aAAa,CAAC,aAAa,CAAC,CAAC;IAC3D,MAAM,gBAAgB,GAAG,QAAQ,CAAC,aAAa,CAAC,iBAAiB,CAAC,CAAC;IAEnE,MAAM,mBAAmB,GAAG;QACZ,qBAAqB,CAAC,SAAS,EAAE,YAAY,CAAC;QAC9C,qBAAqB,CAAC,SAAS,EAAE,gBAAgB,CAAC;KACjE,CAAC;IAEF,MAAM,SAAS,GAAG,yBAAyB,CAAC,mBAAmB,EAAE,UAAU,CAAC,CAAC;IAG7E,MAAM,UAAU,GAAG;QACjB,MAAM,EAAE,MAAsB;QAC9B,OAAO,EAAE,IAAI,CAAC,GAAG,CAAC,YAAY,CAAC,CAAC,CAAC,GAAG,gBAAgB,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC;QAC5D,OAAO,EAAE,IAAI,CAAC,GAAG,CAAC,YAAY,CAAC,CAAC,CAAC,GAAG,gBAAgB,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC;QAC5D,OAAO,EAAE,IAAI,CAAC,GAAG,CAAC,YAAY,CAAC,CAAC,CAAC,GAAG,gBAAgB,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC;KAC7D,CAAC;IAEF,MAAM,mBAAmB,GAAG,IAAI,GAAG,EAAiB,CAAC;IAErD,IAAI,QAAQ,CAAC;IAEb,IAAI,SAAS,EAAE;QACb,QAAQ,GAAG,CAAC,EAAE,KAAK,EAAE,KAAK,EAAE,QAAQ,EAAE,EAAE,EAAE;YACxC,IAAI,cAAc,CAAC,QAAQ,CAAC,KAAK,CAAC,EAAE;gBAClC,OAAO;aACR;YAED,IACE,iBAAiB,CAAC,KAAK,EAAE,WAAW,EAAE,6BAA6B,CAAC,EACpE;gBACA,UAAU,CAAC,KAAK,CAAC,GAAG,YAAY,CAAC;gBAEjC,mBAAmB,CAAC,GAAG,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC,CAAC;aACtC;QACH,CAAC,CAAC;KACH;SAAM;QACL,QAAQ,GAAG,CAAC,EAAE,KAAK,EAAE,KAAK,EAAE,QAAQ,EAAE,EAAE,EAAE;YACxC,IAAI,cAAc,CAAC,QAAQ,CAAC,KAAK,CAAC,EAAE;gBAClC,OAAO;aACR;YACD,UAAU,CAAC,KAAK,CAAC,GAAG,YAAY,CAAC;YAEjC,mBAAmB,CAAC,GAAG,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC,CAAC;QACvC,CAAC,CAAC;KACH;IAED,oBAAoB,CAClB,SAAS,EACT,CAAC,QAAQ,EAAE,QAAQ,EAAE,EAAE,CAAC,cAAc,CAAC,UAAU,EAAE,QAAQ,CAAC,EAC5D,QAAQ,EACR,SAAS,CACV,CAAC;IAEF,MAAM,aAAa,GAAa,KAAK,CAAC,IAAI,CAAC,mBAAmB,CAAC,CAAC;IAEhE,+BAA+B,CAAC,cAAc,EAAE,aAAa,CAAC,CAAC;AACjE,CAAC;AAQD,MAAM,UAAU,gBAAgB,CAC9B,cAAqC,EACrC,aAA4B;IAE5B,UAAU,CAAC,cAAc,EAAE,aAAa,EAAE,KAAK,CAAC,CAAC;AACnD,CAAC;AAQD,MAAM,UAAU,qBAAqB,CACnC,cAAqC,EACrC,aAA4B;IAE5B,MAAM,EAAE,MAAM,EAAE,WAAW,EAAE,GAAG,aAAa,CAAC;IAE9C,IACE,CAAC,OAAO,CAAC,OAAO,CAAC,MAAM,CAAC,UAAU,EAAE,WAAW,CAAC,UAAU,CAAC;QAC3D,CAAC,OAAO,CAAC,OAAO,CAAC,MAAM,CAAC,SAAS,EAAE,WAAW,CAAC,SAAS,CAAC,EACzD;QACA,MAAM,IAAI,KAAK,CACb,gGAAgG,CACjG,CAAC;KACH;IAED,UAAU,CAAC,cAAc,EAAE,aAAa,EAAE,IAAI,CAAC,CAAC;AAClD,CAAC;AAQD,MAAM,UAAU,iBAAiB,CAC/B,cAAqC,EACrC,aAA4B;IAE5B,MAAM,IAAI,KAAK,CAAC,qBAAqB,CAAC,CAAC;AACzC,CAAC"}

package/dist/esm/tools/segmentation/strategies/fillSphere.d.ts

@@ -2,13 +2,16 @@ import type { Types } from '@cornerstonejs/core';
 declare type OperationData = {
     points: [Types.Point3, Types.Point3, Types.Point3, Types.Point3];
     volume: Types.IImageVolume;
+    imageVolume: Types.IImageVolume;
     segmentIndex: number;
     segmentationId: string;
     segmentsLocked: number[];
     viewPlaneNormal: Types.Point3;
     viewUp: Types.Point3;
+    strategySpecificConfiguration: any;
     constraintFn: () => boolean;
 };
 export declare function fillInsideSphere(enabledElement: Types.IEnabledElement, operationData: OperationData): void;
+export declare function thresholdInsideSphere(enabledElement: Types.IEnabledElement, operationData: OperationData): void;
 export declare function fillOutsideSphere(enabledElement: Types.IEnabledElement, operationData: OperationData): void;
 export {};

package/dist/esm/tools/segmentation/strategies/fillSphere.js

@@ -1,18 +1,34 @@
+import { utilities as csUtils } from '@cornerstonejs/core';
 import { triggerSegmentationDataModified } from '../../../stateManagement/segmentation/triggerSegmentationEvents';
 import { pointInSurroundingSphereCallback } from '../../../utilities';
-function fillSphere(enabledElement, operationData, _inside = true) {
+import isWithinThreshold from './utils/isWithinThreshold';
+function fillSphere(enabledElement, operationData, _inside = true, threshold = false) {
     const { viewport } = enabledElement;
-    const { volume: segmentation, segmentsLocked, segmentIndex, segmentationId, points, } = operationData;
+    const { volume: segmentation, segmentsLocked, segmentIndex, imageVolume, strategySpecificConfiguration, segmentationId, points, } = operationData;
     const { imageData, dimensions } = segmentation;
     const scalarData = segmentation.getScalarData();
     const scalarIndex = [];
-    const callback = ({ index, value }) => {
-        if (segmentsLocked.includes(value)) {
-            return;
-        }
-        scalarData[index] = segmentIndex;
-        scalarIndex.push(index);
-    };
+    let callback;
+    if (threshold) {
+        callback = ({ value, index, pointIJK }) => {
+            if (segmentsLocked.includes(value)) {
+                return;
+            }
+            if (isWithinThreshold(index, imageVolume, strategySpecificConfiguration)) {
+                scalarData[index] = segmentIndex;
+                scalarIndex.push(index);
+            }
+        };
+    }
+    else {
+        callback = ({ index, value }) => {
+            if (segmentsLocked.includes(value)) {
+                return;
+            }
+            scalarData[index] = segmentIndex;
+            scalarIndex.push(index);
+        };
+    }
     pointInSurroundingSphereCallback(imageData, [points[0], points[1]], callback, viewport);
     const zMultiple = dimensions[0] * dimensions[1];
     const minSlice = Math.floor(scalarIndex[0] / zMultiple);
@@ -23,6 +39,14 @@ function fillSphere(enabledElement, operationData, _inside = true) {
 export function fillInsideSphere(enabledElement, operationData) {
     fillSphere(enabledElement, operationData, true);
 }
+export function thresholdInsideSphere(enabledElement, operationData) {
+    const { volume, imageVolume } = operationData;
+    if (!csUtils.isEqual(volume.dimensions, imageVolume.dimensions) ||
+        !csUtils.isEqual(volume.direction, imageVolume.direction)) {
+        throw new Error('Only source data the same dimensions/size/orientation as the segmentation currently supported.');
+    }
+    fillSphere(enabledElement, operationData, true, true);
+}
 export function fillOutsideSphere(enabledElement, operationData) {
     fillSphere(enabledElement, operationData, false);
 }

package/dist/esm/tools/segmentation/strategies/fillSphere.js.map

@@ -1 +1 @@
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+{"version":3,"file":"fillSphere.js","sourceRoot":"","sources":["../../../../../src/tools/segmentation/strategies/fillSphere.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,SAAS,IAAI,OAAO,EAAE,MAAM,qBAAqB,CAAC;AAE3D,OAAO,EAAE,+BAA+B,EAAE,MAAM,iEAAiE,CAAC;AAClH,OAAO,EAAE,gCAAgC,EAAE,MAAM,oBAAoB,CAAC;AACtE,OAAO,iBAAiB,MAAM,2BAA2B,CAAC;AAe1D,SAAS,UAAU,CACjB,cAAqC,EACrC,aAA4B,EAC5B,OAAO,GAAG,IAAI,EACd,SAAS,GAAG,KAAK;IAEjB,MAAM,EAAE,QAAQ,EAAE,GAAG,cAAc,CAAC;IACpC,MAAM,EACJ,MAAM,EAAE,YAAY,EACpB,cAAc,EACd,YAAY,EACZ,WAAW,EACX,6BAA6B,EAC7B,cAAc,EACd,MAAM,GACP,GAAG,aAAa,CAAC;IAElB,MAAM,EAAE,SAAS,EAAE,UAAU,EAAE,GAAG,YAAY,CAAC;IAC/C,MAAM,UAAU,GAAG,YAAY,CAAC,aAAa,EAAE,CAAC;IAChD,MAAM,WAAW,GAAG,EAAE,CAAC;IAEvB,IAAI,QAAQ,CAAC;IAEb,IAAI,SAAS,EAAE;QACb,QAAQ,GAAG,CAAC,EAAE,KAAK,EAAE,KAAK,EAAE,QAAQ,EAAE,EAAE,EAAE;YACxC,IAAI,cAAc,CAAC,QAAQ,CAAC,KAAK,CAAC,EAAE;gBAClC,OAAO;aACR;YAED,IACE,iBAAiB,CAAC,KAAK,EAAE,WAAW,EAAE,6BAA6B,CAAC,EACpE;gBACA,UAAU,CAAC,KAAK,CAAC,GAAG,YAAY,CAAC;gBACjC,WAAW,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC;aACzB;QACH,CAAC,CAAC;KACH;SAAM;QACL,QAAQ,GAAG,CAAC,EAAE,KAAK,EAAE,KAAK,EAAE,EAAE,EAAE;YAC9B,IAAI,cAAc,CAAC,QAAQ,CAAC,KAAK,CAAC,EAAE;gBAClC,OAAO;aACR;YACD,UAAU,CAAC,KAAK,CAAC,GAAG,YAAY,CAAC;YACjC,WAAW,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC;QAC1B,CAAC,CAAC;KACH;IAED,gCAAgC,CAC9B,SAAS,EACT,CAAC,MAAM,CAAC,CAAC,CAAC,EAAE,MAAM,CAAC,CAAC,CAAC,CAAC,EACtB,QAAQ,EACR,QAAiC,CAClC,CAAC;IAKF,MAAM,SAAS,GAAG,UAAU,CAAC,CAAC,CAAC,GAAG,UAAU,CAAC,CAAC,CAAC,CAAC;IAChD,MAAM,QAAQ,GAAG,IAAI,CAAC,KAAK,CAAC,WAAW,CAAC,CAAC,CAAC,GAAG,SAAS,CAAC,CAAC;IACxD,MAAM,QAAQ,GAAG,IAAI,CAAC,KAAK,CAAC,WAAW,CAAC,WAAW,CAAC,MAAM,GAAG,CAAC,CAAC,GAAG,SAAS,CAAC,CAAC;IAC7E,MAAM,UAAU,GAAG,KAAK,CAAC,IAAI,CAC3B,EAAE,MAAM,EAAE,QAAQ,GAAG,QAAQ,GAAG,CAAC,EAAE,EACnC,CAAC,CAAC,EAAE,CAAC,EAAE,EAAE,CAAC,CAAC,GAAG,QAAQ,CACvB,CAAC;IAEF,+BAA+B,CAAC,cAAc,EAAE,UAAU,CAAC,CAAC;AAC9D,CAAC;AAQD,MAAM,UAAU,gBAAgB,CAC9B,cAAqC,EACrC,aAA4B;IAE5B,UAAU,CAAC,cAAc,EAAE,aAAa,EAAE,IAAI,CAAC,CAAC;AAClD,CAAC;AAQD,MAAM,UAAU,qBAAqB,CACnC,cAAqC,EACrC,aAA4B;IAE5B,MAAM,EAAE,MAAM,EAAE,WAAW,EAAE,GAAG,aAAa,CAAC;IAE9C,IACE,CAAC,OAAO,CAAC,OAAO,CAAC,MAAM,CAAC,UAAU,EAAE,WAAW,CAAC,UAAU,CAAC;QAC3D,CAAC,OAAO,CAAC,OAAO,CAAC,MAAM,CAAC,SAAS,EAAE,WAAW,CAAC,SAAS,CAAC,EACzD;QACA,MAAM,IAAI,KAAK,CACb,gGAAgG,CACjG,CAAC;KACH;IAED,UAAU,CAAC,cAAc,EAAE,aAAa,EAAE,IAAI,EAAE,IAAI,CAAC,CAAC;AACxD,CAAC;AAQD,MAAM,UAAU,iBAAiB,CAC/B,cAAqC,EACrC,aAA4B;IAE5B,UAAU,CAAC,cAAc,EAAE,aAAa,EAAE,KAAK,CAAC,CAAC;AACnD,CAAC"}

package/dist/esm/tools/segmentation/strategies/utils/isWithinThreshold.d.ts

@@ -0,0 +1,3 @@
+import { Types } from '@cornerstonejs/core';
+declare function isWithinThreshold(index: number, imageVolume: Types.IImageVolume, strategySpecificConfiguration: any): boolean;
+export default isWithinThreshold;

package/dist/esm/tools/segmentation/strategies/utils/isWithinThreshold.js

@@ -0,0 +1,8 @@
+function isWithinThreshold(index, imageVolume, strategySpecificConfiguration) {
+    const { THRESHOLD_INSIDE_CIRCLE } = strategySpecificConfiguration;
+    const voxelValue = imageVolume.getScalarData()[index];
+    const { threshold } = THRESHOLD_INSIDE_CIRCLE;
+    return threshold[0] <= voxelValue && voxelValue <= threshold[1];
+}
+export default isWithinThreshold;
+//# sourceMappingURL=isWithinThreshold.js.map

package/dist/esm/tools/segmentation/strategies/utils/isWithinThreshold.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"isWithinThreshold.js","sourceRoot":"","sources":["../../../../../../src/tools/segmentation/strategies/utils/isWithinThreshold.ts"],"names":[],"mappings":"AAEA,SAAS,iBAAiB,CACxB,KAAa,EACb,WAA+B,EAC/B,6BAAkC;IAElC,MAAM,EAAE,uBAAuB,EAAE,GAAG,6BAA6B,CAAC;IAElE,MAAM,UAAU,GAAG,WAAW,CAAC,aAAa,EAAE,CAAC,KAAK,CAAC,CAAC;IACtD,MAAM,EAAE,SAAS,EAAE,GAAG,uBAAuB,CAAC;IAE9C,OAAO,SAAS,CAAC,CAAC,CAAC,IAAI,UAAU,IAAI,UAAU,IAAI,SAAS,CAAC,CAAC,CAAC,CAAC;AAClE,CAAC;AAED,eAAe,iBAAiB,CAAC"}

package/dist/esm/types/CINETypes.d.ts

@@ -5,6 +5,7 @@ declare type PlayClipOptions = {
     loop?: boolean;
     dynamicCineEnabled?: boolean;
     frameTimeVectorSpeedMultiplier?: number;
+    waitForRendered?: number;
 };
 interface ToolData {
     intervalId: number | undefined;
@@ -22,6 +23,7 @@ declare type CinePlayContext = {
     get numScrollSteps(): number;
     get currentStepIndex(): number;
     get frameTimeVectorEnabled(): boolean;
+    waitForRenderedCount?: number;
     scroll(delta: number): void;
 };
 export type { PlayClipOptions, ToolData, CinePlayContext };

package/dist/esm/types/CalculatorTypes.d.ts

@@ -0,0 +1,6 @@
+declare type Statistics = {
+    name: string;
+    value: number;
+    unit: null | string;
+};
+export type { Statistics };

package/dist/esm/types/CalculatorTypes.js

@@ -0,0 +1,2 @@
+export {};
+//# sourceMappingURL=CalculatorTypes.js.map

package/dist/esm/types/CalculatorTypes.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"CalculatorTypes.js","sourceRoot":"","sources":["../../../src/types/CalculatorTypes.ts"],"names":[],"mappings":""}

package/dist/esm/types/EventTypes.d.ts

@@ -3,7 +3,9 @@ import { Annotation } from './AnnotationTypes';
 import IPoints from './IPoints';
 import ITouchPoints from './ITouchPoints';
 import IDistance from './IDistance';
+import { SetToolBindingsType } from './ISetToolModeOptions';
 import { Swipe } from '../enums/Touch';
+import { ToolModes } from '../enums';
 declare type NormalizedInteractionEventDetail = {
     eventName: string;
     renderingEngineId: string;
@@ -36,6 +38,17 @@ declare type TouchPointsDetail = {
 declare type InteractionEventDetail = NormalizedInteractionEventDetail & (MouseCustomEventDetail | TouchCustomEventDetail) & (MousePointsDetail | TouchPointsDetail);
 declare type InteractionStartEventDetail = InteractionEventDetail;
 declare type InteractionEndEventDetail = InteractionEventDetail;
+declare type ToolModeChangedEventDetail = {
+    toolGroupId: string;
+    toolName: string;
+    mode: ToolModes;
+    toolBindingsOptions?: SetToolBindingsType;
+};
+declare type ToolActivatedEventDetail = {
+    toolGroupId: string;
+    toolName: string;
+    toolBindingsOptions: SetToolBindingsType;
+};
 declare type AnnotationAddedEventDetail = {
     viewportId: string;
     renderingEngineId: string;
@@ -162,6 +175,8 @@ declare type VolumeScrollOutOfBoundsEventDetail = {
 };
 declare type NormalizedMouseEventType = Types.CustomEventType<MouseCustomEventDetail>;
 declare type NormalizedTouchEventType = Types.CustomEventType<TouchCustomEventDetail>;
+declare type ToolModeChangedEventType = Types.CustomEventType<ToolModeChangedEventDetail>;
+declare type ToolActivatedEventType = Types.CustomEventType<ToolActivatedEventDetail>;
 declare type AnnotationAddedEventType = Types.CustomEventType<AnnotationAddedEventDetail>;
 declare type AnnotationCompletedEventType = Types.CustomEventType<AnnotationCompletedEventDetail>;
 declare type AnnotationModifiedEventType = Types.CustomEventType<AnnotationModifiedEventDetail>;
@@ -197,4 +212,4 @@ declare type MouseMoveEventType = Types.CustomEventType<MouseMoveEventDetail>;
 declare type MouseDoubleClickEventType = Types.CustomEventType<MouseDoubleClickEventDetail>;
 declare type MouseWheelEventType = Types.CustomEventType<MouseWheelEventDetail>;
 declare type VolumeScrollOutOfBoundsEventType = Types.CustomEventType<VolumeScrollOutOfBoundsEventDetail>;
-export { InteractionStartType, InteractionEndType, InteractionEventType, NormalizedInteractionEventDetail, NormalizedMouseEventType, NormalizedTouchEventType, AnnotationAddedEventDetail, AnnotationAddedEventType, AnnotationCompletedEventDetail, AnnotationCompletedEventType, AnnotationModifiedEventDetail, AnnotationModifiedEventType, AnnotationRemovedEventDetail, AnnotationRemovedEventType, AnnotationSelectionChangeEventDetail, AnnotationSelectionChangeEventType, AnnotationRenderedEventDetail, AnnotationRenderedEventType, AnnotationLockChangeEventDetail, AnnotationVisibilityChangeEventDetail, AnnotationLockChangeEventType, AnnotationVisibilityChangeEventType, SegmentationDataModifiedEventType, SegmentationRepresentationModifiedEventDetail, SegmentationRepresentationModifiedEventType, SegmentationRepresentationRemovedEventDetail, SegmentationRepresentationRemovedEventType, SegmentationRemovedEventType, SegmentationRemovedEventDetail, SegmentationDataModifiedEventDetail, SegmentationRenderedEventType, SegmentationRenderedEventDetail, SegmentationModifiedEventType, SegmentationModifiedEventDetail, KeyDownEventDetail, KeyDownEventType, KeyUpEventDetail, KeyUpEventType, MouseDownEventDetail, TouchStartEventDetail, MouseDownEventType, TouchStartEventType, MouseDownActivateEventDetail, TouchStartActivateEventDetail, MouseDownActivateEventType, TouchStartActivateEventType, MouseDragEventDetail, TouchDragEventDetail, MouseDragEventType, TouchDragEventType, MouseUpEventDetail, TouchEndEventDetail, MouseUpEventType, TouchEndEventType, MouseClickEventDetail, MouseClickEventType, TouchTapEventDetail, TouchTapEventType, TouchSwipeEventDetail, TouchSwipeEventType, TouchPressEventDetail, TouchPressEventType, MouseMoveEventDetail, MouseMoveEventType, MouseDoubleClickEventDetail, MouseDoubleClickEventType, MouseWheelEventDetail, MouseWheelEventType, VolumeScrollOutOfBoundsEventDetail, VolumeScrollOutOfBoundsEventType, };
+export { InteractionStartType, InteractionEndType, InteractionEventType, NormalizedInteractionEventDetail, NormalizedMouseEventType, NormalizedTouchEventType, ToolModeChangedEventDetail, ToolModeChangedEventType, ToolActivatedEventDetail, ToolActivatedEventType, AnnotationAddedEventDetail, AnnotationAddedEventType, AnnotationCompletedEventDetail, AnnotationCompletedEventType, AnnotationModifiedEventDetail, AnnotationModifiedEventType, AnnotationRemovedEventDetail, AnnotationRemovedEventType, AnnotationSelectionChangeEventDetail, AnnotationSelectionChangeEventType, AnnotationRenderedEventDetail, AnnotationRenderedEventType, AnnotationLockChangeEventDetail, AnnotationVisibilityChangeEventDetail, AnnotationLockChangeEventType, AnnotationVisibilityChangeEventType, SegmentationDataModifiedEventType, SegmentationRepresentationModifiedEventDetail, SegmentationRepresentationModifiedEventType, SegmentationRepresentationRemovedEventDetail, SegmentationRepresentationRemovedEventType, SegmentationRemovedEventType, SegmentationRemovedEventDetail, SegmentationDataModifiedEventDetail, SegmentationRenderedEventType, SegmentationRenderedEventDetail, SegmentationModifiedEventType, SegmentationModifiedEventDetail, KeyDownEventDetail, KeyDownEventType, KeyUpEventDetail, KeyUpEventType, MouseDownEventDetail, TouchStartEventDetail, MouseDownEventType, TouchStartEventType, MouseDownActivateEventDetail, TouchStartActivateEventDetail, MouseDownActivateEventType, TouchStartActivateEventType, MouseDragEventDetail, TouchDragEventDetail, MouseDragEventType, TouchDragEventType, MouseUpEventDetail, TouchEndEventDetail, MouseUpEventType, TouchEndEventType, MouseClickEventDetail, MouseClickEventType, TouchTapEventDetail, TouchTapEventType, TouchSwipeEventDetail, TouchSwipeEventType, TouchPressEventDetail, TouchPressEventType, MouseMoveEventDetail, MouseMoveEventType, MouseDoubleClickEventDetail, MouseDoubleClickEventType, MouseWheelEventDetail, MouseWheelEventType, VolumeScrollOutOfBoundsEventDetail, VolumeScrollOutOfBoundsEventType, };

package/dist/esm/types/ISetToolModeOptions.d.ts

@@ -1,6 +1,6 @@
 import { ToolModes, MouseBindings, KeyboardBindings } from '../enums';
-declare type ToolBindingMouseType = typeof MouseBindings[keyof typeof MouseBindings];
-declare type ToolBindingKeyboardType = typeof KeyboardBindings[keyof typeof KeyboardBindings];
+declare type ToolBindingMouseType = (typeof MouseBindings)[keyof typeof MouseBindings];
+declare type ToolBindingKeyboardType = (typeof KeyboardBindings)[keyof typeof KeyboardBindings];
 declare type IToolBinding = {
     mouseButton?: ToolBindingMouseType;
     modifierKey?: ToolBindingKeyboardType;

package/dist/esm/types/IToolGroup.d.ts

@@ -1,6 +1,7 @@
 import type { Types } from '@cornerstonejs/core';
 import { SetToolBindingsType, ToolOptionsType } from './ISetToolModeOptions';
 import { MouseBindings } from '../enums';
+import { ToolConfiguration } from '../types';
 export default interface IToolGroup {
     _toolInstances: Record<string, any>;
     id: string;
@@ -12,7 +13,7 @@ export default interface IToolGroup {
         (toolName: string): any;
     };
     addTool: {
-        (toolName: string, toolConfiguration?: any): void;
+        (toolName: string, toolConfiguration?: ToolConfiguration): void;
     };
     addToolInstance: {
         (ttoolName: string, parentClassName: string, configuration?: any): void;
@@ -45,7 +46,7 @@ export default interface IToolGroup {
         (toolName: string, strategyName?: string): void;
     };
     setToolConfiguration: {
-        (toolName: string, configuration: Record<any, any>, overwrite?: boolean): void;
+        (toolName: string, configuration: ToolConfiguration, overwrite?: boolean): void;
     };
     getToolConfiguration: {
         (toolName: string, configurationPath: string): any;
@@ -53,4 +54,7 @@ export default interface IToolGroup {
     getDefaultMousePrimary: {
         (): MouseBindings;
     };
+    clone: {
+        (newToolGroupId: string, fnToolFilter: (toolName: string) => boolean): IToolGroup;
+    };
 }

package/dist/esm/types/ToolAction.d.ts

@@ -0,0 +1,8 @@
+import type { Annotation } from './AnnotationTypes';
+import type { InteractionEventType } from './EventTypes';
+import type { SetToolBindingsType } from './ISetToolModeOptions';
+declare type ToolAction = {
+    method: string | ((evt: InteractionEventType, annotation: Annotation) => void);
+    bindings: SetToolBindingsType[];
+};
+export default ToolAction;

package/dist/esm/types/ToolAction.js

@@ -0,0 +1,2 @@
+export {};
+//# sourceMappingURL=ToolAction.js.map

package/dist/esm/types/ToolAction.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"ToolAction.js","sourceRoot":"","sources":["../../../src/types/ToolAction.ts"],"names":[],"mappings":""}

package/dist/esm/types/ToolProps.d.ts

@@ -1,6 +1,10 @@
+import { Calculator } from '../utilities/math/basic';
 declare type SharedToolProp = {
     supportedInteractionTypes?: Array<string>;
-    configuration?: Record<string, any>;
+    configuration?: ToolConfiguration;
+};
+export declare type ToolConfiguration = Record<string, any> & {
+    statsCalculator?: Calculator;
 };
 export declare type ToolProps = SharedToolProp;
 export declare type PublicToolProps = SharedToolProp & {