ruby-spark 1.1.0.1-java
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- checksums.yaml +7 -0
- data/.gitignore +37 -0
- data/Gemfile +47 -0
- data/Guardfile +5 -0
- data/LICENSE.txt +22 -0
- data/README.md +252 -0
- data/Rakefile +35 -0
- data/TODO.md +6 -0
- data/benchmark/aggregate.rb +33 -0
- data/benchmark/bisect.rb +88 -0
- data/benchmark/comparison/prepare.sh +18 -0
- data/benchmark/comparison/python.py +156 -0
- data/benchmark/comparison/r.r +69 -0
- data/benchmark/comparison/ruby.rb +167 -0
- data/benchmark/comparison/run-all.sh +160 -0
- data/benchmark/comparison/scala.scala +181 -0
- data/benchmark/custom_marshal.rb +94 -0
- data/benchmark/digest.rb +150 -0
- data/benchmark/enumerator.rb +88 -0
- data/benchmark/serializer.rb +82 -0
- data/benchmark/sort.rb +43 -0
- data/benchmark/sort2.rb +164 -0
- data/benchmark/take.rb +28 -0
- data/bin/ruby-spark +8 -0
- data/example/pi.rb +28 -0
- data/example/website_search.rb +83 -0
- data/ext/ruby_c/extconf.rb +3 -0
- data/ext/ruby_c/murmur.c +158 -0
- data/ext/ruby_c/murmur.h +9 -0
- data/ext/ruby_c/ruby-spark.c +18 -0
- data/ext/ruby_java/Digest.java +36 -0
- data/ext/ruby_java/Murmur2.java +98 -0
- data/ext/ruby_java/RubySparkExtService.java +28 -0
- data/ext/ruby_java/extconf.rb +3 -0
- data/ext/spark/build.sbt +73 -0
- data/ext/spark/project/plugins.sbt +9 -0
- data/ext/spark/sbt/sbt +34 -0
- data/ext/spark/src/main/scala/Exec.scala +91 -0
- data/ext/spark/src/main/scala/MLLibAPI.scala +4 -0
- data/ext/spark/src/main/scala/Marshal.scala +52 -0
- data/ext/spark/src/main/scala/MarshalDump.scala +113 -0
- data/ext/spark/src/main/scala/MarshalLoad.scala +220 -0
- data/ext/spark/src/main/scala/RubyAccumulatorParam.scala +69 -0
- data/ext/spark/src/main/scala/RubyBroadcast.scala +13 -0
- data/ext/spark/src/main/scala/RubyConstant.scala +13 -0
- data/ext/spark/src/main/scala/RubyMLLibAPI.scala +55 -0
- data/ext/spark/src/main/scala/RubyMLLibUtilAPI.scala +21 -0
- data/ext/spark/src/main/scala/RubyPage.scala +34 -0
- data/ext/spark/src/main/scala/RubyRDD.scala +392 -0
- data/ext/spark/src/main/scala/RubySerializer.scala +14 -0
- data/ext/spark/src/main/scala/RubyTab.scala +11 -0
- data/ext/spark/src/main/scala/RubyUtils.scala +15 -0
- data/ext/spark/src/main/scala/RubyWorker.scala +257 -0
- data/ext/spark/src/test/scala/MarshalSpec.scala +84 -0
- data/lib/ruby-spark.rb +1 -0
- data/lib/spark.rb +198 -0
- data/lib/spark/accumulator.rb +260 -0
- data/lib/spark/broadcast.rb +98 -0
- data/lib/spark/build.rb +43 -0
- data/lib/spark/cli.rb +169 -0
- data/lib/spark/command.rb +86 -0
- data/lib/spark/command/base.rb +158 -0
- data/lib/spark/command/basic.rb +345 -0
- data/lib/spark/command/pair.rb +124 -0
- data/lib/spark/command/sort.rb +51 -0
- data/lib/spark/command/statistic.rb +144 -0
- data/lib/spark/command_builder.rb +141 -0
- data/lib/spark/command_validator.rb +34 -0
- data/lib/spark/config.rb +238 -0
- data/lib/spark/constant.rb +14 -0
- data/lib/spark/context.rb +322 -0
- data/lib/spark/error.rb +50 -0
- data/lib/spark/ext/hash.rb +41 -0
- data/lib/spark/ext/integer.rb +25 -0
- data/lib/spark/ext/io.rb +67 -0
- data/lib/spark/ext/ip_socket.rb +29 -0
- data/lib/spark/ext/module.rb +58 -0
- data/lib/spark/ext/object.rb +24 -0
- data/lib/spark/ext/string.rb +24 -0
- data/lib/spark/helper.rb +10 -0
- data/lib/spark/helper/logger.rb +40 -0
- data/lib/spark/helper/parser.rb +85 -0
- data/lib/spark/helper/serialize.rb +71 -0
- data/lib/spark/helper/statistic.rb +93 -0
- data/lib/spark/helper/system.rb +42 -0
- data/lib/spark/java_bridge.rb +19 -0
- data/lib/spark/java_bridge/base.rb +203 -0
- data/lib/spark/java_bridge/jruby.rb +23 -0
- data/lib/spark/java_bridge/rjb.rb +41 -0
- data/lib/spark/logger.rb +76 -0
- data/lib/spark/mllib.rb +100 -0
- data/lib/spark/mllib/classification/common.rb +31 -0
- data/lib/spark/mllib/classification/logistic_regression.rb +223 -0
- data/lib/spark/mllib/classification/naive_bayes.rb +97 -0
- data/lib/spark/mllib/classification/svm.rb +135 -0
- data/lib/spark/mllib/clustering/gaussian_mixture.rb +82 -0
- data/lib/spark/mllib/clustering/kmeans.rb +118 -0
- data/lib/spark/mllib/matrix.rb +120 -0
- data/lib/spark/mllib/regression/common.rb +73 -0
- data/lib/spark/mllib/regression/labeled_point.rb +41 -0
- data/lib/spark/mllib/regression/lasso.rb +100 -0
- data/lib/spark/mllib/regression/linear.rb +124 -0
- data/lib/spark/mllib/regression/ridge.rb +97 -0
- data/lib/spark/mllib/ruby_matrix/matrix_adapter.rb +53 -0
- data/lib/spark/mllib/ruby_matrix/vector_adapter.rb +57 -0
- data/lib/spark/mllib/stat/distribution.rb +12 -0
- data/lib/spark/mllib/vector.rb +185 -0
- data/lib/spark/rdd.rb +1377 -0
- data/lib/spark/sampler.rb +92 -0
- data/lib/spark/serializer.rb +79 -0
- data/lib/spark/serializer/auto_batched.rb +59 -0
- data/lib/spark/serializer/base.rb +63 -0
- data/lib/spark/serializer/batched.rb +84 -0
- data/lib/spark/serializer/cartesian.rb +13 -0
- data/lib/spark/serializer/compressed.rb +27 -0
- data/lib/spark/serializer/marshal.rb +17 -0
- data/lib/spark/serializer/message_pack.rb +23 -0
- data/lib/spark/serializer/oj.rb +23 -0
- data/lib/spark/serializer/pair.rb +41 -0
- data/lib/spark/serializer/text.rb +25 -0
- data/lib/spark/sort.rb +189 -0
- data/lib/spark/stat_counter.rb +125 -0
- data/lib/spark/storage_level.rb +39 -0
- data/lib/spark/version.rb +3 -0
- data/lib/spark/worker/master.rb +144 -0
- data/lib/spark/worker/spark_files.rb +15 -0
- data/lib/spark/worker/worker.rb +200 -0
- data/ruby-spark.gemspec +47 -0
- data/spec/generator.rb +37 -0
- data/spec/inputs/lorem_300.txt +316 -0
- data/spec/inputs/numbers/1.txt +50 -0
- data/spec/inputs/numbers/10.txt +50 -0
- data/spec/inputs/numbers/11.txt +50 -0
- data/spec/inputs/numbers/12.txt +50 -0
- data/spec/inputs/numbers/13.txt +50 -0
- data/spec/inputs/numbers/14.txt +50 -0
- data/spec/inputs/numbers/15.txt +50 -0
- data/spec/inputs/numbers/16.txt +50 -0
- data/spec/inputs/numbers/17.txt +50 -0
- data/spec/inputs/numbers/18.txt +50 -0
- data/spec/inputs/numbers/19.txt +50 -0
- data/spec/inputs/numbers/2.txt +50 -0
- data/spec/inputs/numbers/20.txt +50 -0
- data/spec/inputs/numbers/3.txt +50 -0
- data/spec/inputs/numbers/4.txt +50 -0
- data/spec/inputs/numbers/5.txt +50 -0
- data/spec/inputs/numbers/6.txt +50 -0
- data/spec/inputs/numbers/7.txt +50 -0
- data/spec/inputs/numbers/8.txt +50 -0
- data/spec/inputs/numbers/9.txt +50 -0
- data/spec/inputs/numbers_0_100.txt +101 -0
- data/spec/inputs/numbers_1_100.txt +100 -0
- data/spec/lib/collect_spec.rb +42 -0
- data/spec/lib/command_spec.rb +68 -0
- data/spec/lib/config_spec.rb +64 -0
- data/spec/lib/context_spec.rb +165 -0
- data/spec/lib/ext_spec.rb +72 -0
- data/spec/lib/external_apps_spec.rb +45 -0
- data/spec/lib/filter_spec.rb +80 -0
- data/spec/lib/flat_map_spec.rb +100 -0
- data/spec/lib/group_spec.rb +109 -0
- data/spec/lib/helper_spec.rb +19 -0
- data/spec/lib/key_spec.rb +41 -0
- data/spec/lib/manipulation_spec.rb +122 -0
- data/spec/lib/map_partitions_spec.rb +87 -0
- data/spec/lib/map_spec.rb +91 -0
- data/spec/lib/mllib/classification_spec.rb +54 -0
- data/spec/lib/mllib/clustering_spec.rb +35 -0
- data/spec/lib/mllib/matrix_spec.rb +32 -0
- data/spec/lib/mllib/regression_spec.rb +116 -0
- data/spec/lib/mllib/vector_spec.rb +77 -0
- data/spec/lib/reduce_by_key_spec.rb +118 -0
- data/spec/lib/reduce_spec.rb +131 -0
- data/spec/lib/sample_spec.rb +46 -0
- data/spec/lib/serializer_spec.rb +88 -0
- data/spec/lib/sort_spec.rb +58 -0
- data/spec/lib/statistic_spec.rb +170 -0
- data/spec/lib/whole_text_files_spec.rb +33 -0
- data/spec/spec_helper.rb +38 -0
- metadata +389 -0
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require "spec_helper"
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RSpec::describe Spark::RDD do
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let(:mapping) { lambda{|x| [x, 1]} }
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let(:numbers) { Generator.numbers }
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it ".collect_as_hash" do
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rdd = $sc.parallelize(numbers)
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rdd = rdd.map(mapping)
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expect(rdd.collect_as_hash).to eql(Hash[numbers.map(&mapping)])
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end
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context ".take" do
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let(:size) { 1000 }
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let(:numbers) { Generator.numbers(size) }
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let(:rdd) { $sc.parallelize(numbers) }
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it "nothing" do
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expect(rdd.take(0)).to eql([])
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end
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it "first" do
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expect(rdd.first).to eql(numbers.first)
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end
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it "less than limit" do
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_size = size / 2
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expect(rdd.take(_size)).to eql(numbers.take(_size))
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end
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it "all" do
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expect(rdd.take(size)).to eql(numbers)
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end
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it "more than limit" do
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expect(rdd.take(size*2)).to eql(numbers)
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end
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end
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end
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require 'spec_helper'
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def to_s_method(x)
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x.to_s
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end
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RSpec::describe Spark::CommandBuilder do
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let(:numbers) { Generator.numbers }
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let(:rdd) { $sc.parallelize(numbers, 1) }
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context '.serialize_function' do
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let(:result) { numbers.map(&:to_s) }
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it 'string' do
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expect(rdd.map('lambda{|x| x.to_s}').collect).to eql(result)
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end
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it 'symbol' do
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expect(rdd.map(:to_s).collect).to eql(result)
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end
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it 'lambda' do
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expect(rdd.map(lambda{|x| x.to_s}).collect).to eql(result)
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end
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it 'method' do
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expect(rdd.map(method(:to_s_method)).collect).to eql(result)
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end
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end
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context '.bind' do
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it 'number' do
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number = rand(0..10000000)
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rdd2 = rdd.map(lambda{|x| x * number}).bind(number: number)
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expect(rdd2.collect).to eq(numbers.map{|x| x * number})
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end
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it 'open struct' do
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require 'ostruct'
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struct = OpenStruct.new
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struct.number = 3
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struct.string = '3'
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struct.array = [1, 2, 3]
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func = lambda{|item|
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item * struct.number + struct.string.to_i + struct.array[0]
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}
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rdd2 = rdd.add_library('ostruct')
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rdd2 = rdd2.map(func)
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rdd2 = rdd2.bind(struct: struct)
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expect(rdd2.collect).to eq(numbers.map(&func))
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end
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it 'different naming' do
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array = [1, 2, 3]
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rdd2 = rdd.map(lambda{|_| my_array.size})
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rdd2 = rdd2.bind(my_array: array)
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expect(rdd2.sum).to eq(numbers.size * array.size)
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end
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end
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end
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require "spec_helper"
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RSpec::describe Spark::Config do
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before(:context) do
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Spark.stop
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end
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after(:context) do
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spark_start
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end
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it "should be stopped" do
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expect(Spark.started?).to be_falsy
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end
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context "new config" do
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let(:configuration) do
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{
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"test.test1" => "test1",
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"test.test2" => "test2",
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"test.test3" => "test3"
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}
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end
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before(:each) do
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Spark.clear_config
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end
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it "throught methods" do
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configuration.each do |key, value|
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Spark.config.set(key, value)
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end
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configuration.each do |key, value|
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expect(Spark.config.get(key)).to eql(value)
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end
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end
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it "throught hash style" do
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configuration.each do |key, value|
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Spark.config[key] = value
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end
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configuration.each do |key, value|
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expect(Spark.config[key]).to eql(value)
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end
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end
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it "throught dsl" do
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configuration.each do |key, value|
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Spark.config {
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set key, value
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}
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56
|
+
end
|
57
|
+
|
58
|
+
configuration.each do |key, value|
|
59
|
+
expect(Spark.config[key]).to eql(value)
|
60
|
+
end
|
61
|
+
end
|
62
|
+
end
|
63
|
+
|
64
|
+
end
|
@@ -0,0 +1,165 @@
|
|
1
|
+
require 'spec_helper'
|
2
|
+
|
3
|
+
RSpec.describe Spark::Context do
|
4
|
+
|
5
|
+
it '.run_job' do
|
6
|
+
workers = 5
|
7
|
+
numbers = (0...100).to_a
|
8
|
+
func = lambda{|part| part.size}
|
9
|
+
|
10
|
+
ser = Spark::Serializer.build { __batched__(__marshal__, 1) }
|
11
|
+
|
12
|
+
rdd = $sc.parallelize(numbers, workers, ser)
|
13
|
+
|
14
|
+
rdd_result = $sc.run_job(rdd, func)
|
15
|
+
result = numbers.each_slice(numbers.size/workers).map(&func)
|
16
|
+
expect(rdd_result).to eql(result)
|
17
|
+
|
18
|
+
parts = [0, 2]
|
19
|
+
func = lambda{|part| part.to_s}
|
20
|
+
|
21
|
+
rdd_result = $sc.run_job(rdd, func, parts)
|
22
|
+
result = []
|
23
|
+
sliced_numbers = numbers.each_slice(numbers.size/workers).to_a
|
24
|
+
parts.each do |part|
|
25
|
+
result << func.call(sliced_numbers[part])
|
26
|
+
end
|
27
|
+
|
28
|
+
expect(rdd_result).to eql(result)
|
29
|
+
end
|
30
|
+
|
31
|
+
it '.broadcast' do
|
32
|
+
workers = rand(1..5)
|
33
|
+
|
34
|
+
values1 = [1,2,3]
|
35
|
+
values2 = [4,5,6]
|
36
|
+
|
37
|
+
broadcast1 = $sc.broadcast(values1)
|
38
|
+
broadcast2 = $sc.broadcast(values2)
|
39
|
+
|
40
|
+
rdd = $sc.parallelize(0..5, workers)
|
41
|
+
rdd = rdd.bind(broadcast1: broadcast1, broadcast2: broadcast2)
|
42
|
+
rdd = rdd.map_partitions(lambda{|_| broadcast1.value + broadcast2.value })
|
43
|
+
|
44
|
+
expect(rdd.sum).to eql(
|
45
|
+
(values1 + values2).reduce(:+) * workers
|
46
|
+
)
|
47
|
+
end
|
48
|
+
|
49
|
+
context '.accumulator' do
|
50
|
+
it 'test' do
|
51
|
+
accum1 = $sc.accumulator(0,)
|
52
|
+
accum2 = $sc.accumulator(1, :*, 1)
|
53
|
+
accum3 = $sc.accumulator(0, lambda{|max, val| val > max ? val : max})
|
54
|
+
|
55
|
+
accum1 += 1
|
56
|
+
|
57
|
+
accum2.add(2)
|
58
|
+
accum2.add(2)
|
59
|
+
accum2.add(2)
|
60
|
+
|
61
|
+
accum3.add(9)
|
62
|
+
accum3.add(6)
|
63
|
+
accum3.add(7)
|
64
|
+
|
65
|
+
expect(accum1.value).to eql(1)
|
66
|
+
expect(accum2.value).to eql(8)
|
67
|
+
expect(accum3.value).to eql(9)
|
68
|
+
|
69
|
+
func = Proc.new do |_, index|
|
70
|
+
accum1.add(1)
|
71
|
+
accum2.add(2)
|
72
|
+
accum3.add(index * 10)
|
73
|
+
end
|
74
|
+
|
75
|
+
rdd = $sc.parallelize(0..4, 4)
|
76
|
+
rdd = rdd.bind(accum1: accum1, accum2: accum2, accum3: accum3)
|
77
|
+
rdd = rdd.map_partitions_with_index(func)
|
78
|
+
rdd.collect
|
79
|
+
|
80
|
+
# http://stackoverflow.com/questions/28560133/ruby-server-java-scala-client-deadlock
|
81
|
+
sleep(1)
|
82
|
+
|
83
|
+
expect(accum1.value).to eql(5)
|
84
|
+
expect(accum2.value).to eql(128)
|
85
|
+
expect(accum3.value).to eql(30)
|
86
|
+
end
|
87
|
+
|
88
|
+
context 'accum param' do
|
89
|
+
it 'symbol' do
|
90
|
+
accum1 = $sc.accumulator(1, :+, 0)
|
91
|
+
accum2 = $sc.accumulator(5, :-, 3)
|
92
|
+
accum3 = $sc.accumulator(1, :*, 1)
|
93
|
+
accum4 = $sc.accumulator(1.0, :/, 1.0)
|
94
|
+
accum5 = $sc.accumulator(2, :**, 2)
|
95
|
+
|
96
|
+
func = Proc.new do |_|
|
97
|
+
accum1.add(1)
|
98
|
+
accum2.add(1)
|
99
|
+
accum3.add(2)
|
100
|
+
accum4.add(2)
|
101
|
+
accum5.add(2)
|
102
|
+
end
|
103
|
+
|
104
|
+
rdd = $sc.parallelize(0..4, 2)
|
105
|
+
rdd = rdd.bind(accum1: accum1, accum2: accum2, accum3: accum3, accum4: accum4, accum5: accum5)
|
106
|
+
rdd = rdd.map_partitions(func)
|
107
|
+
rdd.collect
|
108
|
+
|
109
|
+
# http://stackoverflow.com/questions/28560133/ruby-server-java-scala-client-deadlock
|
110
|
+
sleep(1)
|
111
|
+
|
112
|
+
expect(accum1.value).to eq(3)
|
113
|
+
expect(accum2.value).to eq(1)
|
114
|
+
expect(accum3.value).to eq(4)
|
115
|
+
expect(accum4.value).to eq(4)
|
116
|
+
expect(accum5.value).to eq(65536)
|
117
|
+
end
|
118
|
+
|
119
|
+
it 'proc' do
|
120
|
+
accum1 = $sc.accumulator(1, lambda{|mem, val| mem + val}, 0)
|
121
|
+
accum2 = $sc.accumulator('a', lambda{|mem, val| mem + val}, '')
|
122
|
+
accum3 = $sc.accumulator([], lambda{|mem, val| mem << val}, [])
|
123
|
+
|
124
|
+
func = Proc.new do |_|
|
125
|
+
accum1.add(1)
|
126
|
+
accum2.add('a')
|
127
|
+
accum3.add(1)
|
128
|
+
end
|
129
|
+
|
130
|
+
rdd = $sc.parallelize(0..4, 2)
|
131
|
+
rdd = rdd.bind(accum1: accum1, accum2: accum2, accum3: accum3)
|
132
|
+
rdd = rdd.map_partitions(func)
|
133
|
+
rdd.collect
|
134
|
+
|
135
|
+
# http://stackoverflow.com/questions/28560133/ruby-server-java-scala-client-deadlock
|
136
|
+
sleep(1)
|
137
|
+
|
138
|
+
expect(accum1.value).to eq(3)
|
139
|
+
expect(accum2.value).to eq('aaa')
|
140
|
+
expect(accum3.value).to eq([[1], [1]])
|
141
|
+
end
|
142
|
+
|
143
|
+
it 'string' do
|
144
|
+
expect { $sc.accumulator(1, '0') }.to raise_error(Spark::SerializeError)
|
145
|
+
|
146
|
+
accum = $sc.accumulator(1, 'lambda{|mem, val| mem + val}', 0)
|
147
|
+
|
148
|
+
func = Proc.new do |_|
|
149
|
+
accum.add(1)
|
150
|
+
end
|
151
|
+
|
152
|
+
rdd = $sc.parallelize(0..4, 2)
|
153
|
+
rdd = rdd.bind(accum: accum)
|
154
|
+
rdd = rdd.map_partitions(func)
|
155
|
+
rdd.collect
|
156
|
+
|
157
|
+
# http://stackoverflow.com/questions/28560133/ruby-server-java-scala-client-deadlock
|
158
|
+
sleep(1)
|
159
|
+
|
160
|
+
expect(accum.value).to eq(3)
|
161
|
+
end
|
162
|
+
end
|
163
|
+
end
|
164
|
+
|
165
|
+
end
|
@@ -0,0 +1,72 @@
|
|
1
|
+
require "spec_helper"
|
2
|
+
|
3
|
+
RSpec.describe Array do
|
4
|
+
|
5
|
+
it ".deep_copy" do
|
6
|
+
data = ["a", "b", "c"]
|
7
|
+
new_data = data.dup
|
8
|
+
|
9
|
+
data[0] << "a"
|
10
|
+
|
11
|
+
expect(data).to eql(new_data)
|
12
|
+
|
13
|
+
new_data = data.deep_copy
|
14
|
+
|
15
|
+
data[1] << "b"
|
16
|
+
|
17
|
+
expect(data).to_not eql(new_data)
|
18
|
+
end
|
19
|
+
|
20
|
+
end
|
21
|
+
|
22
|
+
RSpec.describe Hash do
|
23
|
+
|
24
|
+
it ".stringify_keys!" do
|
25
|
+
data = {
|
26
|
+
a: "a",
|
27
|
+
b: "b",
|
28
|
+
c: "c"
|
29
|
+
}
|
30
|
+
|
31
|
+
data.stringify_keys!
|
32
|
+
|
33
|
+
expect(data).to eql({
|
34
|
+
"a" => "a",
|
35
|
+
"b" => "b",
|
36
|
+
"c" => "c"
|
37
|
+
})
|
38
|
+
end
|
39
|
+
|
40
|
+
end
|
41
|
+
|
42
|
+
RSpec.describe String do
|
43
|
+
|
44
|
+
it ".camelize" do
|
45
|
+
data = "aaa_bbb_ccc".camelize
|
46
|
+
expect(data).to eql("AaaBbbCcc")
|
47
|
+
end
|
48
|
+
|
49
|
+
end
|
50
|
+
|
51
|
+
RSpec.describe IO do
|
52
|
+
|
53
|
+
it 'serialize' do
|
54
|
+
file = Tempfile.new('serialize')
|
55
|
+
file.binmode
|
56
|
+
|
57
|
+
file.write_int(1)
|
58
|
+
file.write_long(2)
|
59
|
+
file.write_string("3")
|
60
|
+
file.write_data([4])
|
61
|
+
|
62
|
+
file.rewind
|
63
|
+
|
64
|
+
expect(file.read_int).to eq(1)
|
65
|
+
expect(file.read_long).to eq(2)
|
66
|
+
expect(file.read_string).to eq("3")
|
67
|
+
expect(file.read_data).to eq([4])
|
68
|
+
|
69
|
+
file.unlink
|
70
|
+
end
|
71
|
+
|
72
|
+
end
|