renalware-core 2.0.148 → 2.0.155
Sign up to get free protection for your applications and to get access to all the features.
- checksums.yaml +4 -4
- data/README.md +23 -2
- data/app/assets/config/renalware/core/manifest.js +1 -0
- data/app/assets/images/renalware/icons/align-justify.svg +3 -0
- data/app/assets/images/renalware/icons/bar-chart.svg +1 -0
- data/app/assets/images/renalware/icons/chart-bar.svg +1 -0
- data/app/assets/images/renalware/icons/chart.svg +3 -0
- data/app/assets/images/renalware/icons/list-bullet.svg +1 -0
- data/app/assets/images/renalware/icons/list.svg +8 -0
- data/app/assets/javascripts/renalware/README.md +25 -1
- data/app/assets/javascripts/renalware/components/dialogs.js.erb +3 -1
- data/app/assets/javascripts/renalware/components/hd.js +2 -2
- data/app/assets/javascripts/renalware/components/letters.js +1 -1
- data/app/assets/javascripts/renalware/components/masonry.run.js +2 -2
- data/app/assets/javascripts/renalware/components/navigation.js +0 -7
- data/app/assets/javascripts/renalware/components/patient_menu.js +1 -1
- data/app/assets/javascripts/renalware/components/session_timeout_redirect.js.erb +26 -21
- data/app/assets/javascripts/renalware/components/sortable.js +3 -0
- data/app/assets/javascripts/renalware/components/toggler.js +1 -1
- data/app/assets/javascripts/renalware/core.js.erb +2 -2
- data/app/assets/javascripts/renalware/rollup_compiled.css +106315 -0
- data/app/assets/javascripts/renalware/rollup_compiled.js +3326 -16
- data/app/assets/stylesheets/renalware/base/_variables.scss +1 -0
- data/app/assets/stylesheets/renalware/core.scss +1 -0
- data/app/assets/stylesheets/renalware/lib/_foundation_and_overrides.scss +1 -620
- data/app/assets/stylesheets/renalware/lib/_select2-foundation5-overrides.scss +1 -1
- data/app/assets/stylesheets/renalware/modules/_hd.scss +8 -4
- data/app/assets/stylesheets/renalware/modules/_medications.scss +9 -9
- data/app/assets/stylesheets/renalware/modules/_pathology.scss +8 -1
- data/app/assets/stylesheets/renalware/modules/_patients.scss +4 -0
- data/app/assets/stylesheets/renalware/modules/_pd.scss +35 -0
- data/app/assets/stylesheets/renalware/modules/_users.scss +2 -1
- data/app/assets/stylesheets/renalware/partials/_charting.scss +17 -0
- data/app/assets/stylesheets/renalware/partials/_forms.scss +16 -1
- data/app/assets/stylesheets/renalware/partials/_navigation.scss +15 -12
- data/app/assets/stylesheets/renalware/partials/_simple_form.scss +11 -3
- data/app/assets/stylesheets/renalware/partials/_tables.scss +15 -8
- data/app/assets/stylesheets/renalware/partials/_toggle.scss +0 -66
- data/app/assets/stylesheets/renalware/partials/_toggling.scss +18 -0
- data/app/assets/stylesheets/renalware/partials/_trix.scss +12 -0
- data/app/assets/stylesheets/renalware/partials/_utilities.scss +12 -0
- data/app/assets/stylesheets/tailwind/tailwind.css +3 -0
- data/app/components/renalware/admissions/active_consult_alert_component.html.slim +4 -0
- data/app/components/renalware/admissions/active_consult_alert_component.rb +25 -0
- data/app/components/renalware/application_component.rb +2 -1
- data/app/components/renalware/article_component.html.slim +5 -0
- data/app/components/renalware/article_component.rb +12 -0
- data/app/components/renalware/events/{biopsies_component.html.slim → event_list_component.html.slim} +5 -4
- data/app/components/renalware/events/event_list_component.rb +82 -0
- data/app/components/renalware/hd/administer_prescription_dropdown_component.html.slim +1 -1
- data/app/components/renalware/hd/administer_prescription_dropdown_component.rb +1 -5
- data/app/components/renalware/hd/prescription_last_administration_component.html.slim +0 -1
- data/app/components/renalware/hd/prescription_last_administration_component.rb +8 -7
- data/app/components/renalware/letters/unread_electronic_ccs_component.rb +1 -0
- data/app/components/renalware/medications/tabbed_prescriptions_list_component.html.slim +41 -0
- data/app/components/renalware/medications/tabbed_prescriptions_list_component.rb +47 -0
- data/app/components/renalware/pathology/chart_component.html.slim +5 -0
- data/app/components/renalware/pathology/chart_component.rb +40 -0
- data/app/components/renalware/pathology/sparkline_component.html.slim +15 -0
- data/app/components/renalware/pathology/sparkline_component.rb +135 -0
- data/app/components/renalware/patients/messages_component.html.slim +45 -0
- data/app/components/renalware/patients/messages_component.rb +52 -0
- data/app/components/renalware/patients/side_menu_component.rb +2 -11
- data/app/components/renalware/pd/adequacy_results_component.html.slim +7 -0
- data/app/components/renalware/pd/adequacy_results_component.rb +39 -0
- data/app/components/renalware/pd/pet_results_component.html.slim +37 -0
- data/app/components/renalware/pd/pet_results_component.rb +84 -0
- data/app/{views/renalware/surveys/_eq5d_summary_part.html.slim → components/renalware/surveys/eq5d_component.html.slim} +5 -5
- data/app/{models/renalware/surveys/eq5d_summary_part.rb → components/renalware/surveys/eq5d_component.rb} +7 -5
- data/app/{views/renalware/surveys/_pos_s_summary_part.html.slim → components/renalware/surveys/pos_s_component.html.slim} +6 -9
- data/app/{models/renalware/surveys/pos_s_summary_part.rb → components/renalware/surveys/pos_s_component.rb} +9 -5
- data/app/components/renalware/system/admin_menu_component.html.slim +3 -1
- data/app/components/renalware/system/admin_menu_component.rb +2 -2
- data/app/components/renalware/system/article_component.html.slim +3 -0
- data/app/components/renalware/system/article_component.rb +9 -0
- data/app/components/renalware/users/last_signin_component.html.slim +3 -0
- data/app/components/renalware/users/last_signin_component.rb +23 -0
- data/app/controllers/renalware/admin/playgrounds_controller.rb +1 -1
- data/app/controllers/renalware/admin/users_controller.rb +1 -0
- data/app/controllers/renalware/admissions/consults_controller.rb +1 -1
- data/app/controllers/renalware/base_controller.rb +3 -3
- data/app/controllers/renalware/concerns/pdf_renderable.rb +1 -1
- data/app/controllers/renalware/drugs/drugs_controller.rb +4 -0
- data/app/controllers/renalware/hd/historical_profiles_controller.rb +1 -1
- data/app/controllers/renalware/hd/scheduling/diaries_controller.rb +1 -1
- data/app/controllers/renalware/medications/prescriptions_controller.rb +6 -3
- data/app/controllers/renalware/messaging/internal/messages_controller.rb +14 -5
- data/app/controllers/renalware/pathology/charts_controller.rb +21 -0
- data/app/controllers/renalware/pathology/current_observation_results_controller.rb +1 -1
- data/app/controllers/renalware/pathology/historical_observation_results_controller.rb +1 -1
- data/app/controllers/renalware/pathology/nearest_observation_results_controller.rb +52 -0
- data/app/controllers/renalware/pathology/observation_descriptions_controller.rb +58 -0
- data/app/controllers/renalware/pathology/observation_requests_controller.rb +1 -1
- data/app/controllers/renalware/pathology/observations_controller.rb +26 -2
- data/app/controllers/renalware/pathology/requests/requests_controller.rb +7 -5
- data/app/controllers/renalware/patients/mdms_controller.rb +104 -0
- data/app/controllers/renalware/pd/adequacy_completions_controller.rb +18 -0
- data/app/controllers/renalware/pd/adequacy_results_controller.rb +98 -0
- data/app/controllers/renalware/pd/pet_completions_controller.rb +18 -0
- data/app/controllers/renalware/pd/pet_results_controller.rb +122 -0
- data/app/controllers/renalware/pd/unified_pet_adequacies_controller.rb +102 -0
- data/app/controllers/renalware/renal/aki_alerts_controller.rb +1 -1
- data/app/controllers/renalware/renal/registry_preflight_checks_controller.rb +55 -19
- data/app/controllers/renalware/session_timeout_controller.rb +20 -17
- data/app/controllers/renalware/system/view_metadata_controller.rb +61 -0
- data/app/controllers/renalware/users_controller.rb +25 -0
- data/app/documents/renalware/age.rb +3 -1
- data/app/helpers/renalware/application_helper.rb +9 -8
- data/app/helpers/renalware/article_helper.rb +3 -3
- data/app/helpers/renalware/boolean_helper.rb +15 -0
- data/app/helpers/renalware/clipboard_helper.rb +2 -3
- data/app/helpers/renalware/dashboards_helper.rb +2 -2
- data/app/helpers/renalware/definition_list_helper.rb +3 -3
- data/app/helpers/renalware/devise_helper.rb +1 -1
- data/app/helpers/renalware/drugs_helper.rb +6 -0
- data/app/helpers/renalware/form_helper.rb +2 -2
- data/app/helpers/renalware/layout_helper.rb +1 -1
- data/app/helpers/renalware/letters_helper.rb +1 -1
- data/app/helpers/renalware/link_helper.rb +1 -1
- data/app/helpers/renalware/mdm_helper.rb +1 -0
- data/app/helpers/renalware/navigation_helper.rb +1 -1
- data/app/helpers/renalware/patient_helper.rb +2 -2
- data/app/helpers/renalware/snippets_helper.rb +9 -10
- data/app/helpers/renalware/toggle_helper.rb +6 -6
- data/app/helpers/renalware/tooltip_helper.rb +14 -16
- data/app/inputs/clock_picker_input.rb +3 -3
- data/app/inputs/date_picker_input.rb +3 -3
- data/app/inputs/simple_time_input.rb +3 -3
- data/app/inputs/trix_editor_input.rb +2 -0
- data/app/javascript/renalware/controllers/blas_controller.js +37 -0
- data/app/javascript/renalware/controllers/modal_controller.js +137 -0
- data/app/javascript/renalware/controllers/pathology/sparklines_controller.js +206 -0
- data/app/javascript/renalware/controllers/pd/pet_charts_controller.js +169 -0
- data/app/javascript/renalware/controllers/session_controller.js +223 -0
- data/app/javascript/renalware/controllers/simple_toggle_controller.js +17 -0
- data/app/javascript/renalware/controllers/tabs_controller.js +43 -0
- data/app/javascript/renalware/controllers/toggle_controller.js +2 -2
- data/app/javascript/renalware/index.js +12 -0
- data/app/models/concerns/renalware/patients_ransack_helper.rb +2 -0
- data/app/models/concerns/renalware/sortable.rb +49 -0
- data/app/models/renalware/accesses/assessment.rb +5 -1
- data/app/models/renalware/accesses/patient.rb +2 -2
- data/app/models/renalware/accesses/plan.rb +1 -1
- data/app/models/renalware/accesses/procedure.rb +4 -1
- data/app/models/renalware/accesses/profile.rb +4 -1
- data/app/models/renalware/admissions/request.rb +1 -0
- data/app/models/renalware/clinical/body_composition.rb +5 -2
- data/app/models/renalware/clinical/dry_weight.rb +5 -2
- data/app/models/renalware/clinics/body_surface_area.rb +40 -0
- data/app/models/renalware/clinics/clinic_visit.rb +30 -5
- data/app/models/renalware/clinics/total_body_water.rb +63 -0
- data/app/models/renalware/events/advanced_care_plan.rb +24 -0
- data/app/models/renalware/events/clinical_frailty_score.rb +24 -0
- data/app/models/renalware/feeds/files/create_feed_file.rb +1 -1
- data/app/models/renalware/feeds/hl7_message.rb +1 -0
- data/app/models/renalware/hd/patient.rb +1 -1
- data/app/models/renalware/hd/preference_set.rb +5 -2
- data/app/models/renalware/hd/prescription_last_administration_query.rb +4 -0
- data/app/models/renalware/hd/profile.rb +9 -6
- data/app/models/renalware/hd/schedule_definition.rb +1 -1
- data/app/models/renalware/hd/session.rb +6 -3
- data/app/models/renalware/hd/session_forms/batch_compile_pdfs.rb +1 -1
- data/app/models/renalware/hd/session_forms/pdf_renderer.rb +1 -1
- data/app/models/renalware/hd/sessions/auditable_session_collection.rb +4 -1
- data/app/models/renalware/hd/station.rb +2 -1
- data/app/models/renalware/letters/description.rb +2 -0
- data/app/models/renalware/letters/html_renderer.rb +1 -1
- data/app/models/renalware/letters/letter.rb +1 -1
- data/app/models/renalware/letters/part/prescriptions.rb +12 -3
- data/app/models/renalware/letters/pdf_letter_cache.rb +1 -1
- data/app/models/renalware/letters/printing/batch_compile_pdfs.rb +1 -1
- data/app/models/renalware/letters/printing/duplex_interleaved_pdf_renderer.rb +1 -1
- data/app/models/renalware/letters/recipient_address_pdf_renderer.rb +1 -1
- data/app/models/renalware/letters/recipient_params_processor.rb +1 -1
- data/app/models/renalware/low_clearance/profile.rb +5 -2
- data/app/models/renalware/medications/prescription.rb +4 -6
- data/app/models/renalware/messaging/internal/message_form.rb +1 -0
- data/app/models/renalware/messaging/internal/message_form_builder.rb +2 -1
- data/app/models/renalware/pathology/code_group.rb +3 -1
- data/app/models/renalware/pathology/code_group_membership.rb +4 -1
- data/app/models/renalware/pathology/current_observations_for_descriptions_query.rb +3 -3
- data/app/models/renalware/pathology/measurement_unit.rb +13 -0
- data/app/models/renalware/pathology/nearest_observations_query.rb +44 -0
- data/app/models/renalware/pathology/observation_description.rb +23 -5
- data/app/models/renalware/pathology/observation_descriptions_by_code_query.rb +1 -1
- data/app/models/renalware/pathology/observation_requests_attributes_builder.rb +45 -5
- data/app/models/renalware/pathology/observations_jsonb_serializer.rb +1 -1
- data/app/models/renalware/pathology/observations_within_date_range_query.rb +1 -1
- data/app/models/renalware/patient.rb +22 -4
- data/app/models/renalware/patients/alert.rb +1 -0
- data/app/models/renalware/patients/bookmark.rb +2 -2
- data/app/models/renalware/patients/ingestion/update_master_patient_index.rb +1 -0
- data/app/models/renalware/patients/mdm_menu.rb +41 -0
- data/app/models/renalware/patients/mdm_patients_query.rb +1 -1
- data/app/models/renalware/patients/patient_hospital_identifiers.rb +1 -0
- data/app/models/renalware/patients/search_query.rb +1 -1
- data/app/models/renalware/patients/worry.rb +5 -2
- data/app/models/renalware/pd.rb +2 -0
- data/app/models/renalware/pd/adequacy_calculated_attributes.rb +159 -0
- data/app/models/renalware/pd/adequacy_result.rb +76 -0
- data/app/models/renalware/pd/apd/glucose_calculator.rb +1 -0
- data/app/models/renalware/pd/mdm_patients_query.rb +1 -1
- data/app/models/renalware/pd/patient.rb +4 -0
- data/app/models/renalware/pd/pet_dextrose_concentration.rb +17 -0
- data/app/models/renalware/pd/pet_result.rb +92 -0
- data/app/models/renalware/pd/unified_pet_adequacy_form.rb +46 -0
- data/app/models/renalware/problems/problem.rb +7 -2
- data/app/models/renalware/renal/aki_alert.rb +4 -1
- data/app/models/renalware/renal/profile.rb +4 -1
- data/app/models/renalware/renal/registry/preflight_checks/missing_esrf_query.rb +50 -0
- data/app/models/renalware/snippets/duplicate_snippet_title_generator.rb +1 -0
- data/app/models/renalware/snippets/snippet_query.rb +1 -1
- data/app/models/renalware/surveys/question.rb +1 -2
- data/app/models/renalware/system/column_definition.rb +43 -0
- data/app/models/renalware/system/filter_definition.rb +29 -0
- data/app/models/renalware/system/update_user.rb +5 -0
- data/app/models/renalware/system/version.rb +11 -0
- data/app/models/renalware/system/view_metadata.rb +25 -0
- data/app/models/renalware/transplants/donation.rb +5 -3
- data/app/models/renalware/transplants/donor_followup.rb +4 -3
- data/app/models/renalware/transplants/donor_operation.rb +4 -2
- data/app/models/renalware/transplants/donor_workup.rb +4 -2
- data/app/models/renalware/transplants/failure_cause_description.rb +1 -1
- data/app/models/renalware/transplants/mdm_patients_query.rb +2 -2
- data/app/models/renalware/transplants/patient.rb +1 -1
- data/app/models/renalware/transplants/recipient_followup.rb +6 -5
- data/app/models/renalware/transplants/recipient_operation.rb +5 -2
- data/app/models/renalware/transplants/recipient_workup.rb +5 -2
- data/app/models/renalware/transplants/recipient_workup_builder.rb +1 -0
- data/app/models/renalware/transplants/registration.rb +6 -5
- data/app/models/renalware/transplants/registration_status.rb +1 -1
- data/app/models/renalware/transplants/registrations/wait_list_query.rb +4 -4
- data/app/models/renalware/transplants/rejection_episode.rb +1 -1
- data/app/models/renalware/ukrdc/{batch_number.rb → batch.rb} +1 -1
- data/app/models/renalware/ukrdc/create_encrypted_patient_xml_files.rb +7 -10
- data/app/models/renalware/ukrdc/create_patient_xml_file.rb +3 -4
- data/app/models/renalware/ukrdc/housekeeping/remove_old_export_archive_folders.rb +3 -3
- data/app/models/renalware/ukrdc/housekeeping/remove_stale_files.rb +2 -2
- data/app/models/renalware/ukrdc/incoming/import_surveys.rb +1 -2
- data/app/models/renalware/ukrdc/measurement_unit.rb +21 -0
- data/app/models/renalware/ukrdc/outgoing/rendering/lab_order.rb +30 -2
- data/app/models/renalware/ukrdc/outgoing/rendering/patient_number.rb +1 -1
- data/app/models/renalware/ukrdc/paths.rb +1 -1
- data/app/models/renalware/ukrdc/transmission_log.rb +3 -2
- data/app/models/renalware/ukrdc/treatment_timeline/prepare_tables.rb +1 -1
- data/app/models/renalware/ukrdc/treatment_timeline/remap_model_table_names_to_their_prepared_equivalents.rb +1 -1
- data/app/models/renalware/user.rb +10 -0
- data/app/pdfs/renalware/events/event_pdf.rb +1 -0
- data/app/policies/application_policy.rb +1 -1
- data/app/policies/renalware/events/advanced_care_plan_policy.rb +10 -0
- data/app/policies/renalware/events/clinical_frailty_score_policy.rb +10 -0
- data/app/policies/renalware/medications/prescription_policy.rb +35 -0
- data/app/policies/renalware/pd/adequacy_result_policy.rb +15 -0
- data/app/policies/renalware/pd/pet_result_policy.rb +15 -0
- data/app/policies/renalware/renal/registry_preflight_check_policy.rb +4 -0
- data/app/policies/renalware/system/view_metadata_policy.rb +17 -0
- data/app/presenters/concerns/renalware/accountable_presentation.rb +33 -0
- data/app/presenters/renalware/clinical/profile_presenter.rb +1 -0
- data/app/presenters/renalware/clinics/visit_presenter.rb +11 -0
- data/app/presenters/renalware/events/event_presenter.rb +11 -0
- data/app/presenters/renalware/hd/dashboard_presenter.rb +1 -0
- data/app/presenters/renalware/hd/profile_presenter.rb +1 -0
- data/app/presenters/renalware/hd/scheduling/diary_presenter.rb +1 -0
- data/app/presenters/renalware/hd/session_presenter.rb +1 -0
- data/app/presenters/renalware/hd/unmet_preferences_presenter.rb +1 -1
- data/app/presenters/renalware/mdm_patients_presenter.rb +1 -0
- data/app/presenters/renalware/mdm_presenter.rb +11 -0
- data/app/presenters/renalware/pathology/results_presenter.rb +1 -2
- data/app/presenters/renalware/pd/dashboard_presenter.rb +10 -2
- data/app/presenters/renalware/renal/clinical_summary_presenter.rb +9 -6
- data/app/presenters/renalware/ukrdc/patient_presenter.rb +1 -0
- data/app/presenters/renalware/user_session_presenter.rb +44 -0
- data/app/validators/renalware/patients/nhs_number_validator.rb +88 -0
- data/app/values/renalware/address.rb +1 -0
- data/app/views/renalware/accesses/assessments/show.html.slim +1 -1
- data/app/views/renalware/accesses/procedures/show.html.slim +1 -1
- data/app/views/renalware/accesses/profiles/show.html.slim +1 -1
- data/app/views/renalware/admin/cache/show.html.slim +36 -0
- data/app/views/renalware/admin/playgrounds/show.html.slim +5 -6
- data/app/views/renalware/admin/users/edit.html.slim +9 -0
- data/app/views/renalware/admin/users/index.html.slim +6 -0
- data/app/views/renalware/admissions/admissions/_filters.html.slim +8 -16
- data/app/views/renalware/admissions/consults/_form.html.slim +19 -18
- data/app/views/renalware/clinical/allergies/_list.html.slim +3 -1
- data/app/views/renalware/clinical/profiles/show.html.slim +11 -1
- data/app/views/renalware/clinics/clinic_visits/_table.html.slim +2 -0
- data/app/views/renalware/clinics/clinic_visits/_table_row.html.slim +2 -0
- data/app/views/renalware/dashboard/dashboards/show.html.slim +1 -0
- data/app/views/renalware/dashboard/letters/_letter.html.slim +1 -1
- data/app/views/renalware/directory/people/show.html.slim +1 -1
- data/app/views/renalware/events/advanced_care_plans/_cell.html.slim +2 -0
- data/app/views/renalware/events/advanced_care_plans/_inputs.html.slim +4 -0
- data/app/views/renalware/events/advanced_care_plans/_toggled_cell.html.slim +8 -0
- data/app/views/renalware/events/clinical_frailty_score/_cell.html.slim +2 -0
- data/app/views/renalware/events/clinical_frailty_score/_inputs.html.slim +4 -0
- data/app/views/renalware/events/clinical_frailty_score/_toggled_cell.html.slim +8 -0
- data/app/views/renalware/events/events/_table.html.slim +1 -1
- data/app/views/renalware/hd/current_profile/_show.html.slim +1 -1
- data/app/views/renalware/hd/current_profile/show.html.slim +1 -1
- data/app/views/renalware/hd/prescription_administrations/_form.html.slim +3 -1
- data/app/views/renalware/hd/prescription_administrations/_row.html.slim +1 -1
- data/app/views/renalware/hd/prescription_administrations/new.js.erb +1 -1
- data/app/views/renalware/hd/protocols/_protocol.pdf.slim +39 -38
- data/app/views/renalware/hd/protocols/_virology.html.slim +4 -5
- data/app/views/renalware/hd/scheduling/diary_slots/_slot.html.slim +2 -1
- data/app/views/renalware/hd/sessions/_show.html.slim +1 -1
- data/app/views/renalware/hd/witnesses/_form.html.slim +4 -2
- data/app/views/renalware/letters/contacts/_contact.html.slim +1 -1
- data/app/views/renalware/letters/electronic_receipts/_table.html.slim +1 -1
- data/app/views/renalware/letters/letters/_form.html.slim +1 -1
- data/app/views/renalware/letters/letters/index.html.slim +4 -0
- data/app/views/renalware/letters/parts/_prescriptions.html.slim +4 -0
- data/app/views/renalware/low_clearance/dashboards/show.html.slim +10 -0
- data/app/views/renalware/mdm/_pathology.html.slim +0 -1
- data/app/views/renalware/mdm/_prescriptions.html.slim +4 -13
- data/app/views/renalware/mdm/prescriptions/_table.html.slim +3 -1
- data/app/views/renalware/mdm/show.html.slim +1 -1
- data/app/views/renalware/medications/prescriptions/_current_hd.html.slim +13 -0
- data/app/views/renalware/medications/prescriptions/_filter_form.html.slim +26 -13
- data/app/views/renalware/medications/prescriptions/_form.html.slim +3 -2
- data/app/views/renalware/medications/prescriptions/_options.html.slim +3 -3
- data/app/views/renalware/medications/prescriptions/_table.html.slim +5 -4
- data/app/views/renalware/medications/prescriptions/_tables.html.slim +13 -16
- data/app/views/renalware/medications/prescriptions/index.html.slim +6 -5
- data/app/views/renalware/messaging/internal/messages/_form.html.slim +3 -0
- data/app/views/renalware/messaging/internal/messages/index.html.slim +36 -0
- data/app/views/renalware/navigation/_mdms.html.slim +5 -0
- data/app/views/renalware/navigation/_menu.html.slim +1 -0
- data/app/views/renalware/navigation/_pd.html.slim +5 -0
- data/app/views/renalware/navigation/_renal.html.slim +1 -0
- data/app/views/renalware/navigation/_sign_out.html.slim +5 -1
- data/app/views/renalware/navigation/{_super_admin.html.slim → _super_admin.html.slim.dead} +0 -0
- data/app/views/renalware/pathology/charts/show.html.slim +11 -0
- data/app/views/renalware/pathology/code_groups/edit.html.slim +5 -5
- data/app/views/renalware/pathology/code_groups/index.html.slim +4 -5
- data/app/views/renalware/pathology/code_groups/show.html.slim +25 -26
- data/app/views/renalware/pathology/current_observation_results/index.html.slim +6 -0
- data/app/views/renalware/pathology/historical_observation_results/_table.html.slim +4 -3
- data/app/views/renalware/pathology/historical_observation_results/index.html.slim +1 -1
- data/app/views/renalware/pathology/observation_descriptions/_filters.html.slim +14 -0
- data/app/views/renalware/pathology/observation_descriptions/edit.html.slim +21 -0
- data/app/views/renalware/pathology/observation_descriptions/index.html.slim +38 -0
- data/app/views/renalware/pathology/observations/_diff.html.slim +1 -1
- data/app/views/renalware/pathology/requests/requests/request_form/_crs_form.html.slim +1 -1
- data/app/views/renalware/patients/alerts/_list.html.slim +1 -0
- data/app/views/renalware/patients/mdms/_filters.html.slim +38 -0
- data/app/views/renalware/patients/mdms/_table.html.slim +72 -0
- data/app/views/renalware/patients/mdms/show.html.slim +18 -0
- data/app/views/renalware/patients/patients/show.html.slim +1 -1
- data/app/views/renalware/patients/patients/show/_primary_care_physician.html.slim +1 -1
- data/app/views/renalware/patients/side_menu/_general.html.slim +4 -0
- data/app/views/renalware/patients/worryboard/_filters.html.slim +18 -13
- data/app/views/renalware/pd/_exit_site_infections.html.slim +4 -0
- data/app/views/renalware/pd/_peritonitis_episodes.html.slim +14 -11
- data/app/views/renalware/pd/adequacy_completions/_filters.html.slim +19 -0
- data/app/views/renalware/pd/adequacy_completions/index.html.slim +4 -0
- data/app/views/renalware/pd/adequacy_results/_form_fields.html.slim +9 -0
- data/app/views/renalware/pd/adequacy_results/_table.html.slim +72 -0
- data/app/views/renalware/pd/adequacy_results/edit.html.slim +89 -0
- data/app/views/renalware/pd/adequacy_results/index.js.erb +1 -0
- data/app/views/renalware/pd/adequacy_results/new.html.slim +8 -0
- data/app/views/renalware/pd/dashboards/show.html.slim +3 -0
- data/app/views/renalware/pd/dashboards/show/_page_actions.html.slim +10 -3
- data/app/views/renalware/pd/dashboards/show/_pet_adequacies.html.slim +1 -1
- data/app/views/renalware/pd/peritonitis_episodes/show.html.slim +8 -6
- data/app/views/renalware/pd/pet_completions/_filters.html.slim +24 -0
- data/app/views/renalware/pd/pet_completions/index.html.slim +4 -0
- data/app/views/renalware/pd/pet_results/_form_fields.html.slim +12 -0
- data/app/views/renalware/pd/pet_results/_pathology_results.html.slim +36 -0
- data/app/views/renalware/pd/pet_results/_table.html.slim +62 -0
- data/app/views/renalware/pd/pet_results/edit.html.slim +35 -0
- data/app/views/renalware/pd/pet_results/index.js.erb +1 -0
- data/app/views/renalware/pd/pet_results/new.html.slim +8 -0
- data/app/views/renalware/pd/unified_pet_adequacies/_form.html.slim +22 -0
- data/app/views/renalware/pd/unified_pet_adequacies/new.html.slim +2 -0
- data/app/views/renalware/renal/profiles/show.html.slim +1 -1
- data/app/views/renalware/renal/registry_preflight_checks/_filters.html.slim +5 -3
- data/app/views/renalware/renal/registry_preflight_checks/_navigation.html.slim +1 -0
- data/app/views/renalware/renal/registry_preflight_checks/deaths.html.slim +2 -1
- data/app/views/renalware/renal/registry_preflight_checks/missing_esrf.html.slim +12 -0
- data/app/views/renalware/renal/registry_preflight_checks/patients.html.slim +1 -2
- data/app/views/renalware/shared/_fieldset.html.slim +1 -2
- data/app/views/renalware/shared/_magellan_block.html.slim +1 -2
- data/app/views/renalware/surveys/dashboards/show.html.slim +2 -2
- data/app/views/renalware/system/view_metadata/_columns_table.html.slim +44 -0
- data/app/views/renalware/system/view_metadata/_filters_form.html.slim +19 -0
- data/app/views/renalware/system/view_metadata/_versions.html.slim +23 -0
- data/app/views/renalware/system/view_metadata/edit.html.slim +66 -0
- data/app/views/renalware/transplants/donor_workups/show.html.slim +1 -1
- data/app/views/renalware/transplants/mdm/_bottom.html.slim +3 -1
- data/app/views/renalware/transplants/mdm/_prescriptions.html.slim +6 -22
- data/app/views/renalware/transplants/recipient_followups/show.html.slim +1 -1
- data/app/views/renalware/transplants/recipient_operations/show.html.slim +1 -1
- data/app/views/renalware/transplants/recipient_workups/show.html.slim +1 -1
- data/app/views/renalware/transplants/registrations/show.html.slim +1 -1
- data/app/views/renalware/transplants/wait_lists/show.html.slim +1 -1
- data/app/views/renalware/users/_filters.html.slim +11 -0
- data/app/views/renalware/users/index.html.slim +24 -0
- data/config/initializers/core_extensions.rb +2 -2
- data/config/initializers/delayed_job.rb +1 -1
- data/config/initializers/inflections.rb +9 -0
- data/config/initializers/pagy.rb +5 -0
- data/config/initializers/paper_trail.rb +1 -1
- data/config/initializers/simple_form_wrappers.rb +14 -9
- data/config/initializers/wicked_pdf.rb +12 -0
- data/config/locales/en-GB.yml +1 -1
- data/config/locales/renalware/clinical/allergies.en.yml +1 -0
- data/config/locales/renalware/events/advanced_care_plan.en.yml +12 -0
- data/config/locales/renalware/events/biopsy.en.yml +2 -0
- data/config/locales/renalware/events/clinical_frailty_score.en.yml +16 -0
- data/config/locales/renalware/events/clinical_frailty_score_component.en.yml +8 -0
- data/config/locales/renalware/medications/tabbed_prescriptions_list_component.yml +15 -0
- data/config/locales/renalware/navigation/renal.en.yml +1 -0
- data/config/locales/renalware/nhs_number.en.yml +6 -0
- data/config/locales/renalware/patients/side_menu.en.yml +1 -0
- data/config/locales/renalware/pd/adequacy_result.en.yml +9 -0
- data/config/locales/renalware/pd/dashboard.en.yml +3 -0
- data/config/locales/renalware/pd/pet_result.en.yml +23 -0
- data/config/locales/renalware/renal/registry.en.yml +1 -0
- data/config/permissions.yml +1 -0
- data/config/routes.rb +1 -0
- data/config/routes/messaging.rb +9 -1
- data/config/routes/pathology.rb +7 -0
- data/config/routes/patients.rb +1 -0
- data/config/routes/pd.rb +5 -0
- data/config/routes/renal.rb +1 -0
- data/config/routes/system.rb +5 -1
- data/config/routes/users.rb +3 -0
- data/db/functions/convert_to_float_with_explicit_return_v01.sql +18 -0
- data/db/functions/generate_secure_id_v01.sql +1 -1
- data/db/functions/update_current_observation_set_from_trigger_v05.sql +92 -0
- data/db/functions/update_pathology_observations_nresult_from_trigger_v01.sql +13 -0
- data/db/migrate/20200122182018_update_patient_current_modalities.rb +7 -0
- data/db/migrate/20200122182036_create_transplant_mdm_patients.rb +7 -0
- data/db/migrate/20200122190909_create_view_metadata.rb +44 -0
- data/db/migrate/20200131133223_create_hd_mdm_patients.rb +7 -0
- data/db/migrate/20200205185151_add_columns_to_system_view_metadata.rb +13 -0
- data/db/migrate/20200219113324_create_supportive_care_mdm_patients_view.rb +7 -0
- data/db/migrate/20200226145010_add_unique_indexes.rb +47 -0
- data/db/migrate/20200408131217_associate_batch_with_ukrdc_transmission_log.rb +15 -0
- data/db/migrate/20200421082715_add_body_surface_area_to_clinic_visits.rb +8 -0
- data/db/migrate/20200421132911_create_pd_pet_dextrose_concentrations.rb +13 -0
- data/db/migrate/20200421143546_create_pet_results.rb +66 -0
- data/db/migrate/20200427123229_create_adequacy_results.rb +54 -0
- data/db/migrate/20200616115709_add_height_weight_to_pd_adequacy_results.rb +8 -0
- data/db/migrate/20200618144228_add_feature_flags_to_users.rb +14 -0
- data/db/migrate/20200622120232_add_limits_to_path_obs_descriptions.rb +18 -0
- data/db/migrate/20200626081248_overload_convert_to_float_function.rb +13 -0
- data/db/migrate/20200626090256_add_nresult_to_pathology_observations.rb +29 -0
- data/db/migrate/20200628094228_add_prescriber_to_users.rb +14 -0
- data/db/migrate/20200812074223_add_public_flag_to_messages.rb +18 -0
- data/db/migrate/20200815150303_create_system_versions.rb +16 -0
- data/db/migrate/20200817085618_create_pd_mdm_patients.rb +7 -0
- data/db/migrate/20200817103930_create_low_clearance_mdm_patients.rb +7 -0
- data/db/migrate/20201001144512_update_fn_update_current_obs_set_triggerv05.rb +13 -0
- data/db/migrate/20201001145452_add_position_to_letter_descriptions.rb +5 -0
- data/db/migrate/20201009090959_make_drug_types_unique.rb +8 -0
- data/db/migrate/20201012160414_add_suggested_measurement_unit_to_pathology_observation_descriptions.rb +18 -0
- data/db/migrate/20201012171428_create_ukrdc_measurement_units.rb +18 -0
- data/db/migrate/20201015160542_add_position_to_drug_types.rb +31 -0
- data/db/migrate/20201020155510_add_bmi_to_clinic_visits.rb +28 -0
- data/db/migrate/20201020164524_update_pd_mdm_patients_view.rb +7 -0
- data/db/migrate/20201020170921_update_hd_mdm_patients_view.rb +7 -0
- data/db/migrate/20201020171139_update_low_clearance_mdm_patients_view.rb +7 -0
- data/db/migrate/20201021153832_update_supportive_care_mdm_patients_view.rb +7 -0
- data/db/migrate/20201021154809_update_transplant_mdm_patients_view.rb +7 -0
- data/db/migrate/20201023092859_remove_unused_indexes.rb +20 -0
- data/db/seeds/default/events/event_types.csv +2 -0
- data/db/seeds/default/system/seeds.rb +1 -0
- data/db/seeds/default/system/view_metadata.rb +91 -0
- data/db/seeds/default/ukrdc/measurement_units.csv +12 -0
- data/db/seeds/default/ukrdc/measurement_units.rb +15 -0
- data/db/seeds/default/ukrdc/seeds.rb +1 -0
- data/db/seeds/seeds_helper.rb +8 -2
- data/db/triggers/update_pathology_observations_nresult_trigger_v01.sql +11 -0
- data/db/views/hd_mdm_patients_v01.sql +69 -0
- data/db/views/hd_mdm_patients_v02.sql +70 -0
- data/db/views/low_clearance_mdm_patients_v01.sql +38 -0
- data/db/views/low_clearance_mdm_patients_v02.sql +39 -0
- data/db/views/patient_current_modalities_v02.sql +18 -0
- data/db/views/pd_mdm_patients_v01.sql +42 -0
- data/db/views/pd_mdm_patients_v02.sql +43 -0
- data/db/views/supportive_care_mdm_patients_v01.sql +28 -0
- data/db/views/supportive_care_mdm_patients_v02.sql +29 -0
- data/db/views/transplant_mdm_patients_v01.sql +46 -0
- data/db/views/transplant_mdm_patients_v02.sql +47 -0
- data/lib/renalware/configuration.rb +8 -0
- data/lib/renalware/engine.rb +8 -5
- data/lib/renalware/version_number.rb +10 -0
- data/lib/tasks/db.rake +9 -0
- data/lib/tasks/pd.rake +28 -0
- data/lib/tasks/renalware.rake +7 -1
- data/spec/factories/accesses/profiles.rb +1 -0
- data/spec/factories/drugs/drug_types.rb +5 -1
- data/spec/factories/events/events_types.rb +12 -0
- data/spec/factories/messaging/internal/messages.rb +1 -0
- data/spec/factories/patients/patients.rb +22 -1
- data/spec/factories/patients/practices.rb +1 -1
- data/spec/factories/patients/primary_care_physicians.rb +1 -1
- data/spec/factories/pd/adequacy_results.rb +16 -0
- data/spec/factories/pd/pet_results.rb +9 -0
- data/spec/factories/system/users.rb +1 -0
- data/spec/factories/system/view_metadata.rb +20 -0
- data/spec/support/capybara_helper.rb +2 -4
- data/spec/support/letters_spec_helper.rb +1 -1
- data/spec/support/matchers/validate_timeliness_of.rb +1 -1
- data/spec/support/pathology_spec_helper.rb +1 -2
- data/spec/support/policy_spec_helper.rb +12 -0
- data/spec/support/shared_examples/supersedable_examples.rb +2 -2
- data/vendor/assets/javascripts/foundation/foundation.alert.js +43 -0
- data/vendor/assets/javascripts/foundation/foundation.dropdown.js +468 -0
- data/vendor/assets/javascripts/foundation/foundation.js +727 -0
- data/vendor/assets/javascripts/foundation/foundation.reveal.js +522 -0
- data/vendor/assets/javascripts/foundation/foundation.tab.js +247 -0
- data/vendor/assets/javascripts/foundation/foundation.tooltip.js +348 -0
- data/vendor/assets/javascripts/foundation/foundation.topbar.js +458 -0
- data/vendor/assets/stylesheets/foundation/_functions.scss +156 -0
- data/vendor/assets/stylesheets/foundation/components/_alert-boxes.scss +128 -0
- data/vendor/assets/stylesheets/foundation/components/_buttons.scss +261 -0
- data/vendor/assets/stylesheets/foundation/components/_dropdown-buttons.scss +130 -0
- data/vendor/assets/stylesheets/foundation/components/_dropdown.scss +269 -0
- data/vendor/assets/stylesheets/foundation/components/_forms.scss +601 -0
- data/vendor/assets/stylesheets/foundation/components/_global.scss +566 -0
- data/vendor/assets/stylesheets/foundation/components/_grid.scss +292 -0
- data/vendor/assets/stylesheets/foundation/components/_labels.scss +106 -0
- data/vendor/assets/stylesheets/foundation/components/_pagination.scss +163 -0
- data/vendor/assets/stylesheets/foundation/components/_panels.scss +107 -0
- data/vendor/assets/stylesheets/foundation/components/_reveal.scss +212 -0
- data/vendor/assets/stylesheets/foundation/components/_side-nav.scss +120 -0
- data/vendor/assets/stylesheets/foundation/components/_split-buttons.scss +203 -0
- data/vendor/assets/stylesheets/foundation/components/_sub-nav.scss +125 -0
- data/vendor/assets/stylesheets/foundation/components/_tables.scss +135 -0
- data/vendor/assets/stylesheets/foundation/components/_tabs.scss +142 -0
- data/vendor/assets/stylesheets/foundation/components/_tooltips.scss +142 -0
- data/vendor/assets/stylesheets/foundation/components/_top-bar.scss +745 -0
- data/vendor/assets/stylesheets/foundation/components/_type.scss +525 -0
- data/vendor/assets/stylesheets/foundation/components/_visibility.scss +425 -0
- metadata +293 -90
- data/app/components/renalware/events/biopsies_component.rb +0 -20
- data/app/views/renalware/pd/infection_organisms/_edit.html.slim.obsolete +0 -16
- data/app/views/renalware/transplants/donor_operations/_sections_nav.html.slim +0 -11
- data/app/views/renalware/transplants/donor_workups/_sections_nav.html.slim +0 -15
- data/app/views/renalware/transplants/recipient_operations/_sections_nav.html.slim +0 -14
- data/app/views/renalware/transplants/recipient_workups/_sections_nav.html.slim +0 -15
- data/lib/core_extensions/active_record/sort.rb +0 -52
- data/lib/renalware/version.rb +0 -5
- data/spec/support/pages/accesses/procedure_page.rb +0 -53
- data/spec/support/pages/accesses/profile_page.rb +0 -45
- data/spec/support/pages/admissions/consults_page.rb +0 -26
- data/spec/support/pages/clinical/allergy_page.rb +0 -74
- data/spec/support/pages/clinical/profile_page.rb +0 -28
- data/spec/support/pages/hd/prescription_administration_dialog.rb +0 -132
- data/spec/support/pages/letters/form.rb +0 -63
- data/spec/support/pages/letters/mailshots/form.rb +0 -58
- data/spec/support/pages/letters/patient_letters.rb +0 -20
- data/spec/support/pages/low_clearance/profile_page.rb +0 -70
- data/spec/support/pages/medications/home_delivery_dialog.rb +0 -77
- data/spec/support/pages/medications/prescription_fom.rb +0 -62
- data/spec/support/pages/page_object.rb +0 -10
@@ -0,0 +1,104 @@
|
|
1
|
+
# frozen_string_literal: true
|
2
|
+
|
3
|
+
require_dependency "renalware/patients"
|
4
|
+
|
5
|
+
module Renalware
|
6
|
+
module Patients
|
7
|
+
class MDMsController < BaseController
|
8
|
+
include Renalware::Concerns::Pageable
|
9
|
+
include Pagy::Backend
|
10
|
+
|
11
|
+
class MDMListOptions
|
12
|
+
attr_reader_initialize [
|
13
|
+
:search!,
|
14
|
+
:patients!,
|
15
|
+
:current_view!,
|
16
|
+
:view_proc!,
|
17
|
+
:pagination!
|
18
|
+
]
|
19
|
+
end
|
20
|
+
|
21
|
+
# rubocop:disable Metrics/MethodLength
|
22
|
+
def show
|
23
|
+
authorize Patient, :index?
|
24
|
+
sql_view_klass = SqlView.new(view_name).klass
|
25
|
+
sql_view_klass.reset_column_information
|
26
|
+
search = sql_view_klass.ransack(params[:q])
|
27
|
+
view_proc = ->(patient) { patient_transplants_mdm_path(patient_id: patient.secure_id) }
|
28
|
+
pagy, patients = pagy(search.result)
|
29
|
+
options = MDMListOptions.new(
|
30
|
+
search: search,
|
31
|
+
patients: patients.load, # search.result.page(page).per(5).load,
|
32
|
+
current_view: current_view,
|
33
|
+
view_proc: view_proc,
|
34
|
+
pagination: pagy
|
35
|
+
)
|
36
|
+
render locals: { options: options }
|
37
|
+
end
|
38
|
+
# rubocop:enable Metrics/MethodLength
|
39
|
+
|
40
|
+
private
|
41
|
+
|
42
|
+
def view_name
|
43
|
+
"#{current_view.schema_name}.#{current_view.view_name}"
|
44
|
+
end
|
45
|
+
|
46
|
+
def current_view
|
47
|
+
@current_view ||=
|
48
|
+
views.detect { |vw| vw.slug == params.fetch(:filter, "all") } || views.first
|
49
|
+
end
|
50
|
+
|
51
|
+
def views
|
52
|
+
@views ||= begin
|
53
|
+
scope = params[:scope]
|
54
|
+
System::ViewMetadata.where(
|
55
|
+
category: "mdm",
|
56
|
+
scope: scope
|
57
|
+
).tap do |relation|
|
58
|
+
if relation.empty?
|
59
|
+
raise "No SQL views for found for category 'mdm' scope: '#{scope}'"
|
60
|
+
end
|
61
|
+
end
|
62
|
+
end
|
63
|
+
end
|
64
|
+
|
65
|
+
class SqlView
|
66
|
+
pattr_initialize :view_name
|
67
|
+
|
68
|
+
# Create a class under Renalware:: for this SQL name
|
69
|
+
# Note that Ransack search_form_for requires our otherwise anonymous class to have a name.
|
70
|
+
def klass
|
71
|
+
return Renalware.const_get(class_name) if class_exists?
|
72
|
+
|
73
|
+
underlying_view_name = view_name
|
74
|
+
Class.new(ApplicationRecord) do
|
75
|
+
self.table_name = underlying_view_name
|
76
|
+
define_method(:to_s, ->(_x) { patient_name })
|
77
|
+
define_method(:to_param, -> { secure_id })
|
78
|
+
end.tap do |klass|
|
79
|
+
Renalware.const_set(class_name, klass)
|
80
|
+
# klass.connection # not sure this is required.
|
81
|
+
end
|
82
|
+
end
|
83
|
+
|
84
|
+
private
|
85
|
+
|
86
|
+
def class_name
|
87
|
+
@class_name ||= begin
|
88
|
+
unless view_name.match?(/^[.a-z_0-9]*$/)
|
89
|
+
raise ArgumentError, "Invalid view name '#{view_name}'"
|
90
|
+
end
|
91
|
+
|
92
|
+
"AnonymousView#{view_name.split('.').last.camelcase}"
|
93
|
+
end
|
94
|
+
end
|
95
|
+
|
96
|
+
def class_exists?
|
97
|
+
Renalware.const_get(class_name)
|
98
|
+
rescue NameError
|
99
|
+
false
|
100
|
+
end
|
101
|
+
end
|
102
|
+
end
|
103
|
+
end
|
104
|
+
end
|
@@ -0,0 +1,18 @@
|
|
1
|
+
# frozen_string_literal: true
|
2
|
+
|
3
|
+
require_dependency "renalware/pd"
|
4
|
+
|
5
|
+
module Renalware
|
6
|
+
module PD
|
7
|
+
class AdequacyCompletionsController < BaseController
|
8
|
+
include Pagy::Backend
|
9
|
+
|
10
|
+
def index
|
11
|
+
query = AdequacyResult.joins(:patient).order(performed_on: :desc).ransack(params[:q])
|
12
|
+
pagy, results = pagy(query.result)
|
13
|
+
authorize results
|
14
|
+
render locals: { pagination: pagy, results: results, query: query }
|
15
|
+
end
|
16
|
+
end
|
17
|
+
end
|
18
|
+
end
|
@@ -0,0 +1,98 @@
|
|
1
|
+
# frozen_string_literal: true
|
2
|
+
|
3
|
+
require_dependency "renalware/pd"
|
4
|
+
|
5
|
+
module Renalware
|
6
|
+
module PD
|
7
|
+
class AdequacyResultsController < PD::BaseController
|
8
|
+
def new
|
9
|
+
adequacy = AdequacyResult.new(patient: patient, performed_on: Date.current)
|
10
|
+
authorize adequacy
|
11
|
+
render locals: { adequacy: adequacy }
|
12
|
+
end
|
13
|
+
|
14
|
+
def create
|
15
|
+
adequacy = AdequacyResult.new(result_params)
|
16
|
+
authorize adequacy
|
17
|
+
|
18
|
+
if adequacy.save_by(current_user)
|
19
|
+
redirect_to patient_pd_dashboard_path(patient), notice: success_msg_for("Adequacy result")
|
20
|
+
else
|
21
|
+
render :new, locals: { adequacy: adequacy }
|
22
|
+
end
|
23
|
+
end
|
24
|
+
|
25
|
+
def edit
|
26
|
+
adequacy = find_and_authorize_result
|
27
|
+
# adequacy.derive_calculated_attributes
|
28
|
+
render locals: { adequacy: adequacy }
|
29
|
+
end
|
30
|
+
|
31
|
+
def update
|
32
|
+
result = find_and_authorize_result
|
33
|
+
if result.update_by(current_user, result_params)
|
34
|
+
redirect_to patient_pd_dashboard_path(patient), notice: success_msg_for("Result")
|
35
|
+
else
|
36
|
+
render_edit(result)
|
37
|
+
end
|
38
|
+
end
|
39
|
+
|
40
|
+
def destroy
|
41
|
+
result = find_and_authorize_result
|
42
|
+
result.destroy!
|
43
|
+
redirect_to patient_pd_dashboard_path(patient), notice: success_msg_for("Result")
|
44
|
+
end
|
45
|
+
|
46
|
+
def index
|
47
|
+
respond_to do |format|
|
48
|
+
format.js do
|
49
|
+
results = patient.adequacy_results.ordered
|
50
|
+
authorize results
|
51
|
+
render locals: { results: results }
|
52
|
+
end
|
53
|
+
end
|
54
|
+
end
|
55
|
+
|
56
|
+
private
|
57
|
+
|
58
|
+
def find_and_authorize_result
|
59
|
+
PD::AdequacyResult.for_patient(patient).find(params[:id]).tap do |adequacy|
|
60
|
+
authorize adequacy
|
61
|
+
end
|
62
|
+
end
|
63
|
+
|
64
|
+
def render_edit(adequacy)
|
65
|
+
render :edit, locals: { adequacy: adequacy }
|
66
|
+
end
|
67
|
+
|
68
|
+
# rubocop:disable Metrics/MethodLength
|
69
|
+
def result_params
|
70
|
+
params
|
71
|
+
.require(:pd_adequacy_result)
|
72
|
+
.permit(
|
73
|
+
:patient_id,
|
74
|
+
:performed_on,
|
75
|
+
:height,
|
76
|
+
:weight,
|
77
|
+
:dial_24_vol_in,
|
78
|
+
:dial_24_vol_out,
|
79
|
+
:dial_24_missing,
|
80
|
+
:urine_24_vol,
|
81
|
+
:urine_24_missing,
|
82
|
+
:dialysate_urea,
|
83
|
+
:dialysate_creatinine,
|
84
|
+
:dialysate_glu,
|
85
|
+
:dialysate_na,
|
86
|
+
:dialysate_protein,
|
87
|
+
:urine_urea,
|
88
|
+
:urine_creatinine,
|
89
|
+
:urine_na,
|
90
|
+
:urine_k,
|
91
|
+
:serum_urea,
|
92
|
+
:serum_creatinine
|
93
|
+
)
|
94
|
+
end
|
95
|
+
# rubocop:enable Metrics/MethodLength
|
96
|
+
end
|
97
|
+
end
|
98
|
+
end
|
@@ -0,0 +1,18 @@
|
|
1
|
+
# frozen_string_literal: true
|
2
|
+
|
3
|
+
require_dependency "renalware/pd"
|
4
|
+
|
5
|
+
module Renalware
|
6
|
+
module PD
|
7
|
+
class PETCompletionsController < BaseController
|
8
|
+
include Pagy::Backend
|
9
|
+
|
10
|
+
def index
|
11
|
+
query = PETResult.joins(:patient).order(performed_on: :desc).ransack(params[:q])
|
12
|
+
pagy, results = pagy(query.result)
|
13
|
+
authorize results
|
14
|
+
render locals: { pagination: pagy, results: results, query: query }
|
15
|
+
end
|
16
|
+
end
|
17
|
+
end
|
18
|
+
end
|
@@ -0,0 +1,122 @@
|
|
1
|
+
# frozen_string_literal: true
|
2
|
+
|
3
|
+
require_dependency "renalware/pd"
|
4
|
+
|
5
|
+
module Renalware
|
6
|
+
module PD
|
7
|
+
class PETResultsController < BaseController
|
8
|
+
def new
|
9
|
+
pet = PETResult.new(
|
10
|
+
patient: patient,
|
11
|
+
performed_on: Date.current
|
12
|
+
)
|
13
|
+
authorize pet
|
14
|
+
render_new(pet)
|
15
|
+
end
|
16
|
+
|
17
|
+
def create
|
18
|
+
pet = PETResult.new(pet_result_params)
|
19
|
+
authorize pet
|
20
|
+
|
21
|
+
if pet.save_by(current_user)
|
22
|
+
redirect_to patient_pd_dashboard_path(patient), notice: success_msg_for("PET result")
|
23
|
+
else
|
24
|
+
render_new(pet)
|
25
|
+
end
|
26
|
+
end
|
27
|
+
|
28
|
+
def index
|
29
|
+
respond_to do |format|
|
30
|
+
format.json do # Graphing data
|
31
|
+
authorize PETResult, :index?
|
32
|
+
render json: pet_graph_data
|
33
|
+
end
|
34
|
+
format.js do
|
35
|
+
results = patient.pet_results.ordered
|
36
|
+
authorize results
|
37
|
+
render locals: { results: results }
|
38
|
+
end
|
39
|
+
end
|
40
|
+
end
|
41
|
+
|
42
|
+
def edit
|
43
|
+
render locals: { pet: find_authorize_pet_result }
|
44
|
+
end
|
45
|
+
|
46
|
+
def update
|
47
|
+
pet = find_authorize_pet_result
|
48
|
+
if pet.update_by(current_user, pet_result_params)
|
49
|
+
redirect_to patient_pd_dashboard_path(patient), notice: success_msg_for("PET result")
|
50
|
+
else
|
51
|
+
render_edit(pet)
|
52
|
+
end
|
53
|
+
end
|
54
|
+
|
55
|
+
def destroy
|
56
|
+
find_authorize_pet_result.destroy!
|
57
|
+
redirect_to patient_pd_dashboard_path(patient), notice: success_msg_for("Result")
|
58
|
+
end
|
59
|
+
|
60
|
+
private
|
61
|
+
|
62
|
+
def pet_graph_data
|
63
|
+
patient
|
64
|
+
.pet_results
|
65
|
+
.where("d_pcr is not null and net_uf is not null")
|
66
|
+
.order(performed_on: :asc)
|
67
|
+
.pluck(:d_pcr, :net_uf)
|
68
|
+
end
|
69
|
+
|
70
|
+
def find_authorize_pet_result
|
71
|
+
PD::PETResult.for_patient(patient).find(params[:id]).tap do |pet|
|
72
|
+
authorize pet
|
73
|
+
end
|
74
|
+
end
|
75
|
+
|
76
|
+
def render_edit(pet)
|
77
|
+
render :edit, locals: { pet: pet }
|
78
|
+
end
|
79
|
+
|
80
|
+
def render_new(pet)
|
81
|
+
render :new, locals: { pet: pet }
|
82
|
+
end
|
83
|
+
|
84
|
+
# rubocop:disable Metrics/MethodLength
|
85
|
+
def pet_result_params
|
86
|
+
dialysate_sample_params = [0, 2, 4, 6].each_with_object([]) do |hr, arr|
|
87
|
+
arr << :"sample_#{hr}hr_time"
|
88
|
+
arr << :"sample_#{hr}hr_urea"
|
89
|
+
arr << :"sample_#{hr}hr_creatinine"
|
90
|
+
arr << :"sample_#{hr}hr_glc"
|
91
|
+
arr << :"sample_#{hr}hr_sodium"
|
92
|
+
arr << :"sample_#{hr}hr_protein"
|
93
|
+
end
|
94
|
+
|
95
|
+
params
|
96
|
+
.require(:pd_pet_result)
|
97
|
+
.permit(
|
98
|
+
:patient_id,
|
99
|
+
:performed_on,
|
100
|
+
:test_type,
|
101
|
+
:volume_in,
|
102
|
+
:volume_out,
|
103
|
+
:dextrose_concentration_id,
|
104
|
+
:infusion_time,
|
105
|
+
:drain_time,
|
106
|
+
:overnight_volume_in,
|
107
|
+
:overnight_volume_out,
|
108
|
+
:overnight_dextrose_concentration_id,
|
109
|
+
:overnight_dwell_time,
|
110
|
+
:serum_time,
|
111
|
+
:serum_urea,
|
112
|
+
:serum_creatinine,
|
113
|
+
:plasma_glc,
|
114
|
+
:serum_ab,
|
115
|
+
:serum_na,
|
116
|
+
*dialysate_sample_params
|
117
|
+
)
|
118
|
+
end
|
119
|
+
# rubocop:enable Metrics/MethodLength
|
120
|
+
end
|
121
|
+
end
|
122
|
+
end
|
@@ -0,0 +1,102 @@
|
|
1
|
+
# frozen_string_literal: true
|
2
|
+
|
3
|
+
require_dependency "renalware/pd/base_controller"
|
4
|
+
|
5
|
+
module Renalware
|
6
|
+
module PD
|
7
|
+
# PET and Adequacy are two distinct, descrete PD tests.
|
8
|
+
# The function of this unified PET + Adequacy controller is to provide the functionality for
|
9
|
+
# a user to add the data for both at the same time.
|
10
|
+
# This is because
|
11
|
+
# a) users tend to regard the tests as 'lumped-together' (even though they aren't), and
|
12
|
+
# b) both tests are often done at the same time, so a unified form saves some time and effort.
|
13
|
+
#
|
14
|
+
# Note that we never edit a unified PET + Adequacy; as they create separate rows in the db
|
15
|
+
# and are separate models, once created they are treated distinctly. This is mainly because
|
16
|
+
# the processing of the tests is quicte different.
|
17
|
+
# See pet.rb and adequacy.rb for more detail.
|
18
|
+
class UnifiedPETAdequaciesController < BaseController
|
19
|
+
include PresenterHelper
|
20
|
+
|
21
|
+
# We use an activbe model form to present a unified model api for the view
|
22
|
+
# to display and submit in the #new template.
|
23
|
+
def new
|
24
|
+
form = UnifiedPETAdequacyForm.new(
|
25
|
+
patient: patient,
|
26
|
+
pet: PETResult.new(patient: patient, performed_on: Date.current),
|
27
|
+
adequacy: AdequacyResult.new(patient: patient, performed_on: Date.current)
|
28
|
+
)
|
29
|
+
authorize Patient, :index?
|
30
|
+
render locals: { form: form }
|
31
|
+
end
|
32
|
+
|
33
|
+
def create
|
34
|
+
authorize Patient, :new?
|
35
|
+
pet = PETResult.new(pet_params)
|
36
|
+
adequacy = AdequacyResult.new(adequacy_params)
|
37
|
+
form = build_form_object(pet, adequacy)
|
38
|
+
|
39
|
+
if form.valid?
|
40
|
+
form.save_by!(current_user)
|
41
|
+
redirect_to patient_pd_dashboard_path(patient)
|
42
|
+
else
|
43
|
+
render :new, locals: { form: form }
|
44
|
+
end
|
45
|
+
end
|
46
|
+
|
47
|
+
def build_form_object(pet, adequacy)
|
48
|
+
UnifiedPETAdequacyForm.new(
|
49
|
+
patient: patient,
|
50
|
+
pet: pet,
|
51
|
+
adequacy: adequacy,
|
52
|
+
**unified_params.to_h.symbolize_keys
|
53
|
+
)
|
54
|
+
end
|
55
|
+
|
56
|
+
# rubocop:disable Metrics/MethodLength
|
57
|
+
def pet_params
|
58
|
+
params
|
59
|
+
.require(:patient_pd_unified_pet_adequacy)
|
60
|
+
.require(:pet)
|
61
|
+
.permit(
|
62
|
+
:patient_id,
|
63
|
+
:performed_on,
|
64
|
+
:test_type,
|
65
|
+
:volume_in,
|
66
|
+
:volume_out,
|
67
|
+
:dextrose_concentration_id,
|
68
|
+
:infusion_time,
|
69
|
+
:drain_time,
|
70
|
+
:overnight_volume_in,
|
71
|
+
:overnight_volume_out,
|
72
|
+
:overnight_dextrose_concentration_id,
|
73
|
+
:overnight_dwell_time
|
74
|
+
)
|
75
|
+
end
|
76
|
+
# rubocop:enable Metrics/MethodLength
|
77
|
+
|
78
|
+
def adequacy_params
|
79
|
+
params
|
80
|
+
.require(:patient_pd_unified_pet_adequacy)
|
81
|
+
.require(:adequacy)
|
82
|
+
.permit(
|
83
|
+
:patient_id,
|
84
|
+
:performed_on,
|
85
|
+
:height,
|
86
|
+
:weight,
|
87
|
+
:dial_24_vol_in,
|
88
|
+
:dial_24_vol_out,
|
89
|
+
:dial_24_missing,
|
90
|
+
:urine_24_vol,
|
91
|
+
:urine_24_missing
|
92
|
+
)
|
93
|
+
end
|
94
|
+
|
95
|
+
def unified_params
|
96
|
+
params
|
97
|
+
.require(:patient_pd_unified_pet_adequacy)
|
98
|
+
.permit(:adequacy_missing, :pet_missing)
|
99
|
+
end
|
100
|
+
end
|
101
|
+
end
|
102
|
+
end
|