renalware-core 2.0.148 → 2.0.155

data/app/components/renalware/events/biopsies_component.rb

@@ -1,20 +0,0 @@
-# frozen_string_literal: true
-
-module Renalware
-  module Events
-    class BiopsiesComponent < ApplicationComponent
-      validates :patient, presence: true
-
-      def initialize(patient:, limit: 6)
-        @patient = patient
-        relation = Biopsy.for_patient(patient).includes(:created_by)
-        @biopsies = relation.limit(limit).ordered
-        @total_biopsies = relation.count
-      end
-
-      private
-
-      attr_reader :patient, :biopsies, :total_biopsies
-    end
-  end
-end

data/app/views/renalware/pd/infection_organisms/_edit.html.slim.obsolete

@@ -1,16 +0,0 @@
-.large-12.columns
-  dl.accordion(data-accordion)
-    dd.accordion-navigation.organism-form
-      a.fa-plus.fa-minus.form-toggle.organism-accordian href="#edit-organism-#{io.object.id}"
-        = "#{io.object.organism_code.name} - #{io.object.sensitivity}"
-
-        .right.edit Edit
-
-      .columns.large-12.organism-form.content id="edit-organism-#{io.object.id}" data-index=0
-        fieldset
-          legend Edit organism and sensitivity
-          = render "renalware/infection_organisms/fields", io: io
-
-          .organism-form.content id="edit-organism-#{io.object.id}"
-            = io.check_box :_destroy
-            = io.label :_destroy, "Terminate?", class: "delete"

data/app/views/renalware/transplants/donor_operations/_sections_nav.html.slim

@@ -1,11 +0,0 @@
-ruby:
-  sections = [
-    ["Operation", "operation"],
-    ["Diagnosis", "diagnosis"],
-    ["Outcome", "outcome"]
-  ]
-
-dl.sub-nav data-magellan-expedition="fixed"
-  - sections.each do |title, target|
-    dd data-magellan-arrival="#{target}"
-      = link_to title, "#" + target

data/app/views/renalware/transplants/donor_workups/_sections_nav.html.slim

@@ -1,15 +0,0 @@
-ruby:
-  sections = [
-    ["Comorbidities", "comorbidities"],
-    ["Infections", "infections"],
-    ["Imaging", "imaging_and_scans"],
-    ["Creat Clearance", "creatinine_clearance"],
-    ["GFR", "glomerular_filtration_rate"],
-    ["Urine Dipsticks", "urine_dipsticks"],
-    ["Other Investigations", "other_investigations"]
-  ]
-
-dl.sub-nav data-magellan-expedition="fixed"
-  - sections.each do |title, target|
-    dd data-magellan-arrival="#{target}"
-      = link_to title, "#" + target

data/app/views/renalware/transplants/recipient_operations/_sections_nav.html.slim

@@ -1,14 +0,0 @@
-ruby:
-  sections = [
-    ["Operation", "operation"],
-    ["Recipient", "recipient"],
-    ["Donor", "donor"],
-    ["Cadaveric Donor", "cadaveric_donor"],
-    ["Donor Specific Antibodies", "donor_specific_antibodies"],
-    ["BK Virus", "bk_virus"]
-  ]
-
-dl.sub-nav data-magellan-expedition="fixed"
-  - sections.each do |title, target|
-    dd data-magellan-arrival="#{target}"
-      = link_to title, "#" + target

data/app/views/renalware/transplants/recipient_workups/_sections_nav.html.slim

@@ -1,15 +0,0 @@
-ruby:
-  sections = [
-    ["Historical", "historical"],
-    ["Scores", "scores"],
-    ["Obstetrics/Gynaecology History", "obstetrics_gynaecology"],
-    ["Examination", "examination"],
-    ["Education", "education"],
-    ["Consent", "consent"],
-    ["HLA Data", "hla"]
-  ]
-
-dl.sub-nav data-magellan-expedition="fixed"
-  - sections.each do |title, target|
-    dd data-magellan-arrival="#{target}"
-      = link_to title, "#" + target

data/lib/core_extensions/active_record/sort.rb

@@ -1,52 +0,0 @@
-# frozen_string_literal: true
-
-module CoreExtensions
-  module ActiveRecord
-    # Assumes that the model has the #position attribute and adds 2 features to a model that
-    # includes it:
-    # 1. Set the :position to the next highest value when a new row is added. If the model has a
-    #    position_sorting_scope scope or class method, this is used to narrow the range of records
-    #    searched when finding the current max position
-    # 2. Add ability to sort rows based on an array of ids.
-    #
-    # TODO: move to a model concern and include selectively rather than globally.
-    module Sort
-      def self.included(base)
-        base.extend ClassMethods
-
-        base.before_create :set_position
-      end
-
-      module ClassMethods
-        # A controller #sort action might for instance invoke this class method on an object.
-        # The array of ids are the model to sort, and sorting is done by updating each model's
-        # position to reflect their place in the array.
-        def sort(ids)
-          Array(ids).each_with_index do |id, index|
-            where(id: id).update_all(["position=?", index + 1])
-          end
-        end
-      end
-
-      # Invoked by the callback when a record is created to set the initial value of #position.
-      # If no position_sorting_scope is defined on the model class, we set position to the max
-      # position in the whole table. If position_sorting_scope is provided we use it to refine the
-      # grouping and hence the max(position) found - for example to get the max position where
-      # patient_id = 123
-      #
-      # Example scope in a model:
-      #   scope :position_sorting_scope, ->(problem) { where(patient_id: problem.patient.id) }
-      #
-      def set_position
-        return unless respond_to?(:position)
-
-        scope = if self.class.respond_to?(:position_sorting_scope)
-                  self.class.position_sorting_scope(self)
-                else
-                  self.class
-                end
-        self.position = (scope.maximum(:position) || 0) + 1
-      end
-    end
-  end
-end

data/lib/renalware/version.rb

@@ -1,5 +0,0 @@
-# frozen_string_literal: true
-
-module Renalware
-  VERSION = "2.0.148"
-end

data/spec/support/pages/accesses/procedure_page.rb

@@ -1,53 +0,0 @@
-# frozen_string_literal: true
-
-require_relative "../page_object"
-
-module Pages
-  module Accesses
-    class ProcedurePage < PageObject
-      include CapybaraHelper
-      pattr_initialize :patient
-
-      def visit_add
-        visit patient_accesses_dashboard_path(patient)
-        within(".page-actions") do
-          click_on "Add"
-          click_on "Access Procedure"
-        end
-      end
-
-      def visit_edit
-        visit patient_accesses_dashboard_path(patient)
-        within_article "Procedure History" do
-          click_on "Edit"
-        end
-      end
-
-      def performed_on=(value)
-        fill_in "Performed On", with: value
-      end
-
-      def performed_by=(value)
-        fill_in "Performed By", with: value
-      end
-
-      def procedure_type=(value)
-        select(value, from: "Access Procedure")
-      end
-
-      def side=(value)
-        select value, from: "Access Side"
-      end
-
-      def catetheter_insertion_technique=(value)
-        select value, from: "PD Catheter Insertion Technique"
-      end
-
-      def save
-        within ".top" do
-          find('input[name="commit"]').click
-        end
-      end
-    end
-  end
-end

data/spec/support/pages/accesses/profile_page.rb

@@ -1,45 +0,0 @@
-# frozen_string_literal: true
-
-require_relative "../page_object"
-
-module Pages
-  module Accesses
-    class ProfilePage < PageObject
-      include CapybaraHelper
-      pattr_initialize :patient
-
-      def visit_add
-        visit patient_accesses_dashboard_path(patient)
-        within(".page-actions") do
-          click_on "Add"
-          click_on "Access Profile"
-        end
-      end
-
-      def visit_edit
-        visit patient_accesses_dashboard_path(patient)
-        within_article "Access Profile History" do
-          click_on "Edit"
-        end
-      end
-
-      def formed_on=(value)
-        fill_in "Formed On", with: value
-      end
-
-      def access_type=(value)
-        select(value, from: "Access Type")
-      end
-
-      def side=(value)
-        select value, from: "Access Side"
-      end
-
-      def save
-        within ".top" do
-          find('input[name="commit"]').click
-        end
-      end
-    end
-  end
-end

data/spec/support/pages/admissions/consults_page.rb

@@ -1,26 +0,0 @@
-# frozen_string_literal: true
-
-require_relative "../page_object"
-
-module Pages
-  module Admissions
-    class Consults < PageObject
-      def go
-        visit admissions_consults_path
-        self
-      end
-
-      def sort_by_modality
-        within ".admissions-consults-table thead" do
-          click_on "Modality"
-        end
-      end
-
-      def has_patient?(patient)
-        within ".admissions-consults-table" do
-          has_content?(patient.to_s)
-        end
-      end
-    end
-  end
-end

data/spec/support/pages/clinical/allergy_page.rb

@@ -1,74 +0,0 @@
-# frozen_string_literal: true
-
-require_relative "../page_object"
-
-module Pages
-  module Clinical
-    class AllergyPage < PageObject
-      pattr_initialize :patient
-
-      def go
-        visit patient_clinical_profile_path(patient)
-        self
-      end
-
-      def add_allergy(description)
-        within ".clinical-allergies" do
-          click_on t_allergies(".add")
-        end
-        within "#add-allergy-modal.open" do
-          fill_in "clinical_allergy_description", with: description
-          click_on modal_t(".save")
-        end
-      end
-
-      def remove_allergy(allergy)
-        within ".clinical-allergies table" do
-          row_css = row_css_for(allergy)
-          row = page.find(row_css)
-          within row do
-            click_on t_allergies(".delete")
-            page.driver.browser.switch_to.alert.accept
-          end
-        end
-      end
-
-      def exists?(allergy)
-        within ".clinical-allergies table" do
-          row_css = row_css_for(allergy)
-          page.has_selector?(row_css)
-        end
-      end
-
-      def status_form_disabled?
-        page.has_no_css?(".clinical-allergies .allergy-status-form .disabled")
-      end
-
-      def mark_patient_as_having_no_known_allergies
-        within ".clinical-allergies" do
-          check(t_allergy_status(".no_known_allergies"))
-          click_on t_allergy_status(".save")
-        end
-      end
-
-      private
-
-      def row_css_for(allergy)
-        "tbody tr[data-allergy-id='#{allergy.id}']"
-      end
-
-      def t_allergies(key, scope: "renalware.clinical.allergies.list", required: false)
-        translation = I18n.t(key, scope: scope)
-        required ? "* #{translation}" : translation
-      end
-
-      def modal_t(key, required: false)
-        t_allergies(key, scope: "renalware.clinical.allergies.new", required: required)
-      end
-
-      def t_allergy_status(key, required: false)
-        t_allergies(key, scope: "renalware.clinical.allergy_statuses.form", required: required)
-      end
-    end
-  end
-end

data/spec/support/pages/clinical/profile_page.rb

@@ -1,28 +0,0 @@
-# frozen_string_literal: true
-
-require_relative "../page_object"
-
-module Pages
-  module Clinical
-    class ProfilePage < Pages::PageObject
-      pattr_initialize :patient
-
-      def edit
-        visit patient_clinical_profile_path(patient)
-        within ".page-actions" do
-          click_on "Edit"
-        end
-      end
-
-      def save
-        within ".form-actions" do
-          find('input[name="commit"]').click
-        end
-      end
-
-      def named_consultant=(user)
-        select user.to_s, from: "Named consultant"
-      end
-    end
-  end
-end

data/spec/support/pages/hd/prescription_administration_dialog.rb

@@ -1,132 +0,0 @@
-# frozen_string_literal: true
-
-require "rails_helper"
-require_relative "../page_object"
-require "capybara-select-2"
-
-module Pages
-  module HD
-    class PrescriptionAdministrationDialog < PageObject
-      include CapybaraSelect2
-      pattr_initialize [:prescription!]
-      MODAL_CONTAINER_ID = "#hd-prescription-administration-modal"
-
-      def container_css
-        MODAL_CONTAINER_ID
-      end
-
-      # Assumes we are the HD Summary
-      def open_by_clicking_on_drug_name
-        visit patient_hd_dashboard_path(prescription.patient)
-        within(".page-heading") do
-          click_on "Record HD Drugs" # will dropdown the menu so we can select...
-          click_on prescription.drug.name
-        end
-      end
-
-      def visible?
-        page.has_css?("#{MODAL_CONTAINER_ID} .modal")
-      end
-
-      def displaying_prescription?
-        within(MODAL_CONTAINER_ID) do
-          page.has_content?(prescription.drug.name)
-        end
-      end
-
-      def not_administered_reason=(reason)
-        select reason, from: "hd_prescription_administration_reason_id"
-      end
-
-      def notes=(value)
-        within(MODAL_CONTAINER_ID) do
-          fill_in "Notes", with: value
-        end
-      end
-
-      def recorded_on=(value)
-        fill_in "Recorded on", with: value
-      end
-
-      def administered=(value)
-        return if value.nil?
-
-        selection = value ? "Yes" : "No"
-        within(".hd_prescription_administration_administered") do
-          choose selection
-        end
-      end
-
-      def administered_by=(user)
-        within ".user-and-password--administrator" do
-          select2 user.given_name, from: "Nurse"
-        end
-      end
-
-      def administered_by_password=(password)
-        fill_password(:administrator, password)
-      end
-
-      def administered_by_id
-        within ".user-and-password--administrator" do
-          find("select option[selected='selected']")&.value&.to_i
-        end
-      end
-
-      def witnessed_by=(user)
-        return if user.blank?
-
-        within ".user-and-password--witness" do
-          select2 user.given_name, from: "Witness"
-        end
-      end
-
-      def witnessed_by_password=(password)
-        fill_password(:witness, password)
-      end
-
-      # Returns an array of captions for visible submit buttons on the form
-      def save_button_captions
-        within(MODAL_CONTAINER_ID) do
-          all("input[type='submit']").map(&:value)
-        end
-      end
-
-      def save
-        within(MODAL_CONTAINER_ID) do
-          click_on "Save"
-        end
-      end
-
-      def save_and_witness_later
-        within(MODAL_CONTAINER_ID) do
-          click_on "Save and Witness Later"
-        end
-      end
-
-      # Cancel the dialog
-      def cancel
-        within(MODAL_CONTAINER_ID) do
-          click_on "Cancel"
-        end
-      end
-
-      # def submit
-      #   within ".top" do
-      #     click_on "Create"
-      #   end
-      # end
-
-      private
-
-      # Fill in the password field and then simulate a tab which will cause a
-      # blur and the handler will authenticate the password
-      def fill_password(user_type, password)
-        within ".user-and-password--#{user_type}" do
-          find("input[type='password']").set(password)
-          # find(".user-password").send_keys :tab
-        end
-      end
-    end
-  end
-end