renalware-core 2.0.148 → 2.0.155
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- checksums.yaml +4 -4
- data/README.md +23 -2
- data/app/assets/config/renalware/core/manifest.js +1 -0
- data/app/assets/images/renalware/icons/align-justify.svg +3 -0
- data/app/assets/images/renalware/icons/bar-chart.svg +1 -0
- data/app/assets/images/renalware/icons/chart-bar.svg +1 -0
- data/app/assets/images/renalware/icons/chart.svg +3 -0
- data/app/assets/images/renalware/icons/list-bullet.svg +1 -0
- data/app/assets/images/renalware/icons/list.svg +8 -0
- data/app/assets/javascripts/renalware/README.md +25 -1
- data/app/assets/javascripts/renalware/components/dialogs.js.erb +3 -1
- data/app/assets/javascripts/renalware/components/hd.js +2 -2
- data/app/assets/javascripts/renalware/components/letters.js +1 -1
- data/app/assets/javascripts/renalware/components/masonry.run.js +2 -2
- data/app/assets/javascripts/renalware/components/navigation.js +0 -7
- data/app/assets/javascripts/renalware/components/patient_menu.js +1 -1
- data/app/assets/javascripts/renalware/components/session_timeout_redirect.js.erb +26 -21
- data/app/assets/javascripts/renalware/components/sortable.js +3 -0
- data/app/assets/javascripts/renalware/components/toggler.js +1 -1
- data/app/assets/javascripts/renalware/core.js.erb +2 -2
- data/app/assets/javascripts/renalware/rollup_compiled.css +106315 -0
- data/app/assets/javascripts/renalware/rollup_compiled.js +3326 -16
- data/app/assets/stylesheets/renalware/base/_variables.scss +1 -0
- data/app/assets/stylesheets/renalware/core.scss +1 -0
- data/app/assets/stylesheets/renalware/lib/_foundation_and_overrides.scss +1 -620
- data/app/assets/stylesheets/renalware/lib/_select2-foundation5-overrides.scss +1 -1
- data/app/assets/stylesheets/renalware/modules/_hd.scss +8 -4
- data/app/assets/stylesheets/renalware/modules/_medications.scss +9 -9
- data/app/assets/stylesheets/renalware/modules/_pathology.scss +8 -1
- data/app/assets/stylesheets/renalware/modules/_patients.scss +4 -0
- data/app/assets/stylesheets/renalware/modules/_pd.scss +35 -0
- data/app/assets/stylesheets/renalware/modules/_users.scss +2 -1
- data/app/assets/stylesheets/renalware/partials/_charting.scss +17 -0
- data/app/assets/stylesheets/renalware/partials/_forms.scss +16 -1
- data/app/assets/stylesheets/renalware/partials/_navigation.scss +15 -12
- data/app/assets/stylesheets/renalware/partials/_simple_form.scss +11 -3
- data/app/assets/stylesheets/renalware/partials/_tables.scss +15 -8
- data/app/assets/stylesheets/renalware/partials/_toggle.scss +0 -66
- data/app/assets/stylesheets/renalware/partials/_toggling.scss +18 -0
- data/app/assets/stylesheets/renalware/partials/_trix.scss +12 -0
- data/app/assets/stylesheets/renalware/partials/_utilities.scss +12 -0
- data/app/assets/stylesheets/tailwind/tailwind.css +3 -0
- data/app/components/renalware/admissions/active_consult_alert_component.html.slim +4 -0
- data/app/components/renalware/admissions/active_consult_alert_component.rb +25 -0
- data/app/components/renalware/application_component.rb +2 -1
- data/app/components/renalware/article_component.html.slim +5 -0
- data/app/components/renalware/article_component.rb +12 -0
- data/app/components/renalware/events/{biopsies_component.html.slim → event_list_component.html.slim} +5 -4
- data/app/components/renalware/events/event_list_component.rb +82 -0
- data/app/components/renalware/hd/administer_prescription_dropdown_component.html.slim +1 -1
- data/app/components/renalware/hd/administer_prescription_dropdown_component.rb +1 -5
- data/app/components/renalware/hd/prescription_last_administration_component.html.slim +0 -1
- data/app/components/renalware/hd/prescription_last_administration_component.rb +8 -7
- data/app/components/renalware/letters/unread_electronic_ccs_component.rb +1 -0
- data/app/components/renalware/medications/tabbed_prescriptions_list_component.html.slim +41 -0
- data/app/components/renalware/medications/tabbed_prescriptions_list_component.rb +47 -0
- data/app/components/renalware/pathology/chart_component.html.slim +5 -0
- data/app/components/renalware/pathology/chart_component.rb +40 -0
- data/app/components/renalware/pathology/sparkline_component.html.slim +15 -0
- data/app/components/renalware/pathology/sparkline_component.rb +135 -0
- data/app/components/renalware/patients/messages_component.html.slim +45 -0
- data/app/components/renalware/patients/messages_component.rb +52 -0
- data/app/components/renalware/patients/side_menu_component.rb +2 -11
- data/app/components/renalware/pd/adequacy_results_component.html.slim +7 -0
- data/app/components/renalware/pd/adequacy_results_component.rb +39 -0
- data/app/components/renalware/pd/pet_results_component.html.slim +37 -0
- data/app/components/renalware/pd/pet_results_component.rb +84 -0
- data/app/{views/renalware/surveys/_eq5d_summary_part.html.slim → components/renalware/surveys/eq5d_component.html.slim} +5 -5
- data/app/{models/renalware/surveys/eq5d_summary_part.rb → components/renalware/surveys/eq5d_component.rb} +7 -5
- data/app/{views/renalware/surveys/_pos_s_summary_part.html.slim → components/renalware/surveys/pos_s_component.html.slim} +6 -9
- data/app/{models/renalware/surveys/pos_s_summary_part.rb → components/renalware/surveys/pos_s_component.rb} +9 -5
- data/app/components/renalware/system/admin_menu_component.html.slim +3 -1
- data/app/components/renalware/system/admin_menu_component.rb +2 -2
- data/app/components/renalware/system/article_component.html.slim +3 -0
- data/app/components/renalware/system/article_component.rb +9 -0
- data/app/components/renalware/users/last_signin_component.html.slim +3 -0
- data/app/components/renalware/users/last_signin_component.rb +23 -0
- data/app/controllers/renalware/admin/playgrounds_controller.rb +1 -1
- data/app/controllers/renalware/admin/users_controller.rb +1 -0
- data/app/controllers/renalware/admissions/consults_controller.rb +1 -1
- data/app/controllers/renalware/base_controller.rb +3 -3
- data/app/controllers/renalware/concerns/pdf_renderable.rb +1 -1
- data/app/controllers/renalware/drugs/drugs_controller.rb +4 -0
- data/app/controllers/renalware/hd/historical_profiles_controller.rb +1 -1
- data/app/controllers/renalware/hd/scheduling/diaries_controller.rb +1 -1
- data/app/controllers/renalware/medications/prescriptions_controller.rb +6 -3
- data/app/controllers/renalware/messaging/internal/messages_controller.rb +14 -5
- data/app/controllers/renalware/pathology/charts_controller.rb +21 -0
- data/app/controllers/renalware/pathology/current_observation_results_controller.rb +1 -1
- data/app/controllers/renalware/pathology/historical_observation_results_controller.rb +1 -1
- data/app/controllers/renalware/pathology/nearest_observation_results_controller.rb +52 -0
- data/app/controllers/renalware/pathology/observation_descriptions_controller.rb +58 -0
- data/app/controllers/renalware/pathology/observation_requests_controller.rb +1 -1
- data/app/controllers/renalware/pathology/observations_controller.rb +26 -2
- data/app/controllers/renalware/pathology/requests/requests_controller.rb +7 -5
- data/app/controllers/renalware/patients/mdms_controller.rb +104 -0
- data/app/controllers/renalware/pd/adequacy_completions_controller.rb +18 -0
- data/app/controllers/renalware/pd/adequacy_results_controller.rb +98 -0
- data/app/controllers/renalware/pd/pet_completions_controller.rb +18 -0
- data/app/controllers/renalware/pd/pet_results_controller.rb +122 -0
- data/app/controllers/renalware/pd/unified_pet_adequacies_controller.rb +102 -0
- data/app/controllers/renalware/renal/aki_alerts_controller.rb +1 -1
- data/app/controllers/renalware/renal/registry_preflight_checks_controller.rb +55 -19
- data/app/controllers/renalware/session_timeout_controller.rb +20 -17
- data/app/controllers/renalware/system/view_metadata_controller.rb +61 -0
- data/app/controllers/renalware/users_controller.rb +25 -0
- data/app/documents/renalware/age.rb +3 -1
- data/app/helpers/renalware/application_helper.rb +9 -8
- data/app/helpers/renalware/article_helper.rb +3 -3
- data/app/helpers/renalware/boolean_helper.rb +15 -0
- data/app/helpers/renalware/clipboard_helper.rb +2 -3
- data/app/helpers/renalware/dashboards_helper.rb +2 -2
- data/app/helpers/renalware/definition_list_helper.rb +3 -3
- data/app/helpers/renalware/devise_helper.rb +1 -1
- data/app/helpers/renalware/drugs_helper.rb +6 -0
- data/app/helpers/renalware/form_helper.rb +2 -2
- data/app/helpers/renalware/layout_helper.rb +1 -1
- data/app/helpers/renalware/letters_helper.rb +1 -1
- data/app/helpers/renalware/link_helper.rb +1 -1
- data/app/helpers/renalware/mdm_helper.rb +1 -0
- data/app/helpers/renalware/navigation_helper.rb +1 -1
- data/app/helpers/renalware/patient_helper.rb +2 -2
- data/app/helpers/renalware/snippets_helper.rb +9 -10
- data/app/helpers/renalware/toggle_helper.rb +6 -6
- data/app/helpers/renalware/tooltip_helper.rb +14 -16
- data/app/inputs/clock_picker_input.rb +3 -3
- data/app/inputs/date_picker_input.rb +3 -3
- data/app/inputs/simple_time_input.rb +3 -3
- data/app/inputs/trix_editor_input.rb +2 -0
- data/app/javascript/renalware/controllers/blas_controller.js +37 -0
- data/app/javascript/renalware/controllers/modal_controller.js +137 -0
- data/app/javascript/renalware/controllers/pathology/sparklines_controller.js +206 -0
- data/app/javascript/renalware/controllers/pd/pet_charts_controller.js +169 -0
- data/app/javascript/renalware/controllers/session_controller.js +223 -0
- data/app/javascript/renalware/controllers/simple_toggle_controller.js +17 -0
- data/app/javascript/renalware/controllers/tabs_controller.js +43 -0
- data/app/javascript/renalware/controllers/toggle_controller.js +2 -2
- data/app/javascript/renalware/index.js +12 -0
- data/app/models/concerns/renalware/patients_ransack_helper.rb +2 -0
- data/app/models/concerns/renalware/sortable.rb +49 -0
- data/app/models/renalware/accesses/assessment.rb +5 -1
- data/app/models/renalware/accesses/patient.rb +2 -2
- data/app/models/renalware/accesses/plan.rb +1 -1
- data/app/models/renalware/accesses/procedure.rb +4 -1
- data/app/models/renalware/accesses/profile.rb +4 -1
- data/app/models/renalware/admissions/request.rb +1 -0
- data/app/models/renalware/clinical/body_composition.rb +5 -2
- data/app/models/renalware/clinical/dry_weight.rb +5 -2
- data/app/models/renalware/clinics/body_surface_area.rb +40 -0
- data/app/models/renalware/clinics/clinic_visit.rb +30 -5
- data/app/models/renalware/clinics/total_body_water.rb +63 -0
- data/app/models/renalware/events/advanced_care_plan.rb +24 -0
- data/app/models/renalware/events/clinical_frailty_score.rb +24 -0
- data/app/models/renalware/feeds/files/create_feed_file.rb +1 -1
- data/app/models/renalware/feeds/hl7_message.rb +1 -0
- data/app/models/renalware/hd/patient.rb +1 -1
- data/app/models/renalware/hd/preference_set.rb +5 -2
- data/app/models/renalware/hd/prescription_last_administration_query.rb +4 -0
- data/app/models/renalware/hd/profile.rb +9 -6
- data/app/models/renalware/hd/schedule_definition.rb +1 -1
- data/app/models/renalware/hd/session.rb +6 -3
- data/app/models/renalware/hd/session_forms/batch_compile_pdfs.rb +1 -1
- data/app/models/renalware/hd/session_forms/pdf_renderer.rb +1 -1
- data/app/models/renalware/hd/sessions/auditable_session_collection.rb +4 -1
- data/app/models/renalware/hd/station.rb +2 -1
- data/app/models/renalware/letters/description.rb +2 -0
- data/app/models/renalware/letters/html_renderer.rb +1 -1
- data/app/models/renalware/letters/letter.rb +1 -1
- data/app/models/renalware/letters/part/prescriptions.rb +12 -3
- data/app/models/renalware/letters/pdf_letter_cache.rb +1 -1
- data/app/models/renalware/letters/printing/batch_compile_pdfs.rb +1 -1
- data/app/models/renalware/letters/printing/duplex_interleaved_pdf_renderer.rb +1 -1
- data/app/models/renalware/letters/recipient_address_pdf_renderer.rb +1 -1
- data/app/models/renalware/letters/recipient_params_processor.rb +1 -1
- data/app/models/renalware/low_clearance/profile.rb +5 -2
- data/app/models/renalware/medications/prescription.rb +4 -6
- data/app/models/renalware/messaging/internal/message_form.rb +1 -0
- data/app/models/renalware/messaging/internal/message_form_builder.rb +2 -1
- data/app/models/renalware/pathology/code_group.rb +3 -1
- data/app/models/renalware/pathology/code_group_membership.rb +4 -1
- data/app/models/renalware/pathology/current_observations_for_descriptions_query.rb +3 -3
- data/app/models/renalware/pathology/measurement_unit.rb +13 -0
- data/app/models/renalware/pathology/nearest_observations_query.rb +44 -0
- data/app/models/renalware/pathology/observation_description.rb +23 -5
- data/app/models/renalware/pathology/observation_descriptions_by_code_query.rb +1 -1
- data/app/models/renalware/pathology/observation_requests_attributes_builder.rb +45 -5
- data/app/models/renalware/pathology/observations_jsonb_serializer.rb +1 -1
- data/app/models/renalware/pathology/observations_within_date_range_query.rb +1 -1
- data/app/models/renalware/patient.rb +22 -4
- data/app/models/renalware/patients/alert.rb +1 -0
- data/app/models/renalware/patients/bookmark.rb +2 -2
- data/app/models/renalware/patients/ingestion/update_master_patient_index.rb +1 -0
- data/app/models/renalware/patients/mdm_menu.rb +41 -0
- data/app/models/renalware/patients/mdm_patients_query.rb +1 -1
- data/app/models/renalware/patients/patient_hospital_identifiers.rb +1 -0
- data/app/models/renalware/patients/search_query.rb +1 -1
- data/app/models/renalware/patients/worry.rb +5 -2
- data/app/models/renalware/pd.rb +2 -0
- data/app/models/renalware/pd/adequacy_calculated_attributes.rb +159 -0
- data/app/models/renalware/pd/adequacy_result.rb +76 -0
- data/app/models/renalware/pd/apd/glucose_calculator.rb +1 -0
- data/app/models/renalware/pd/mdm_patients_query.rb +1 -1
- data/app/models/renalware/pd/patient.rb +4 -0
- data/app/models/renalware/pd/pet_dextrose_concentration.rb +17 -0
- data/app/models/renalware/pd/pet_result.rb +92 -0
- data/app/models/renalware/pd/unified_pet_adequacy_form.rb +46 -0
- data/app/models/renalware/problems/problem.rb +7 -2
- data/app/models/renalware/renal/aki_alert.rb +4 -1
- data/app/models/renalware/renal/profile.rb +4 -1
- data/app/models/renalware/renal/registry/preflight_checks/missing_esrf_query.rb +50 -0
- data/app/models/renalware/snippets/duplicate_snippet_title_generator.rb +1 -0
- data/app/models/renalware/snippets/snippet_query.rb +1 -1
- data/app/models/renalware/surveys/question.rb +1 -2
- data/app/models/renalware/system/column_definition.rb +43 -0
- data/app/models/renalware/system/filter_definition.rb +29 -0
- data/app/models/renalware/system/update_user.rb +5 -0
- data/app/models/renalware/system/version.rb +11 -0
- data/app/models/renalware/system/view_metadata.rb +25 -0
- data/app/models/renalware/transplants/donation.rb +5 -3
- data/app/models/renalware/transplants/donor_followup.rb +4 -3
- data/app/models/renalware/transplants/donor_operation.rb +4 -2
- data/app/models/renalware/transplants/donor_workup.rb +4 -2
- data/app/models/renalware/transplants/failure_cause_description.rb +1 -1
- data/app/models/renalware/transplants/mdm_patients_query.rb +2 -2
- data/app/models/renalware/transplants/patient.rb +1 -1
- data/app/models/renalware/transplants/recipient_followup.rb +6 -5
- data/app/models/renalware/transplants/recipient_operation.rb +5 -2
- data/app/models/renalware/transplants/recipient_workup.rb +5 -2
- data/app/models/renalware/transplants/recipient_workup_builder.rb +1 -0
- data/app/models/renalware/transplants/registration.rb +6 -5
- data/app/models/renalware/transplants/registration_status.rb +1 -1
- data/app/models/renalware/transplants/registrations/wait_list_query.rb +4 -4
- data/app/models/renalware/transplants/rejection_episode.rb +1 -1
- data/app/models/renalware/ukrdc/{batch_number.rb → batch.rb} +1 -1
- data/app/models/renalware/ukrdc/create_encrypted_patient_xml_files.rb +7 -10
- data/app/models/renalware/ukrdc/create_patient_xml_file.rb +3 -4
- data/app/models/renalware/ukrdc/housekeeping/remove_old_export_archive_folders.rb +3 -3
- data/app/models/renalware/ukrdc/housekeeping/remove_stale_files.rb +2 -2
- data/app/models/renalware/ukrdc/incoming/import_surveys.rb +1 -2
- data/app/models/renalware/ukrdc/measurement_unit.rb +21 -0
- data/app/models/renalware/ukrdc/outgoing/rendering/lab_order.rb +30 -2
- data/app/models/renalware/ukrdc/outgoing/rendering/patient_number.rb +1 -1
- data/app/models/renalware/ukrdc/paths.rb +1 -1
- data/app/models/renalware/ukrdc/transmission_log.rb +3 -2
- data/app/models/renalware/ukrdc/treatment_timeline/prepare_tables.rb +1 -1
- data/app/models/renalware/ukrdc/treatment_timeline/remap_model_table_names_to_their_prepared_equivalents.rb +1 -1
- data/app/models/renalware/user.rb +10 -0
- data/app/pdfs/renalware/events/event_pdf.rb +1 -0
- data/app/policies/application_policy.rb +1 -1
- data/app/policies/renalware/events/advanced_care_plan_policy.rb +10 -0
- data/app/policies/renalware/events/clinical_frailty_score_policy.rb +10 -0
- data/app/policies/renalware/medications/prescription_policy.rb +35 -0
- data/app/policies/renalware/pd/adequacy_result_policy.rb +15 -0
- data/app/policies/renalware/pd/pet_result_policy.rb +15 -0
- data/app/policies/renalware/renal/registry_preflight_check_policy.rb +4 -0
- data/app/policies/renalware/system/view_metadata_policy.rb +17 -0
- data/app/presenters/concerns/renalware/accountable_presentation.rb +33 -0
- data/app/presenters/renalware/clinical/profile_presenter.rb +1 -0
- data/app/presenters/renalware/clinics/visit_presenter.rb +11 -0
- data/app/presenters/renalware/events/event_presenter.rb +11 -0
- data/app/presenters/renalware/hd/dashboard_presenter.rb +1 -0
- data/app/presenters/renalware/hd/profile_presenter.rb +1 -0
- data/app/presenters/renalware/hd/scheduling/diary_presenter.rb +1 -0
- data/app/presenters/renalware/hd/session_presenter.rb +1 -0
- data/app/presenters/renalware/hd/unmet_preferences_presenter.rb +1 -1
- data/app/presenters/renalware/mdm_patients_presenter.rb +1 -0
- data/app/presenters/renalware/mdm_presenter.rb +11 -0
- data/app/presenters/renalware/pathology/results_presenter.rb +1 -2
- data/app/presenters/renalware/pd/dashboard_presenter.rb +10 -2
- data/app/presenters/renalware/renal/clinical_summary_presenter.rb +9 -6
- data/app/presenters/renalware/ukrdc/patient_presenter.rb +1 -0
- data/app/presenters/renalware/user_session_presenter.rb +44 -0
- data/app/validators/renalware/patients/nhs_number_validator.rb +88 -0
- data/app/values/renalware/address.rb +1 -0
- data/app/views/renalware/accesses/assessments/show.html.slim +1 -1
- data/app/views/renalware/accesses/procedures/show.html.slim +1 -1
- data/app/views/renalware/accesses/profiles/show.html.slim +1 -1
- data/app/views/renalware/admin/cache/show.html.slim +36 -0
- data/app/views/renalware/admin/playgrounds/show.html.slim +5 -6
- data/app/views/renalware/admin/users/edit.html.slim +9 -0
- data/app/views/renalware/admin/users/index.html.slim +6 -0
- data/app/views/renalware/admissions/admissions/_filters.html.slim +8 -16
- data/app/views/renalware/admissions/consults/_form.html.slim +19 -18
- data/app/views/renalware/clinical/allergies/_list.html.slim +3 -1
- data/app/views/renalware/clinical/profiles/show.html.slim +11 -1
- data/app/views/renalware/clinics/clinic_visits/_table.html.slim +2 -0
- data/app/views/renalware/clinics/clinic_visits/_table_row.html.slim +2 -0
- data/app/views/renalware/dashboard/dashboards/show.html.slim +1 -0
- data/app/views/renalware/dashboard/letters/_letter.html.slim +1 -1
- data/app/views/renalware/directory/people/show.html.slim +1 -1
- data/app/views/renalware/events/advanced_care_plans/_cell.html.slim +2 -0
- data/app/views/renalware/events/advanced_care_plans/_inputs.html.slim +4 -0
- data/app/views/renalware/events/advanced_care_plans/_toggled_cell.html.slim +8 -0
- data/app/views/renalware/events/clinical_frailty_score/_cell.html.slim +2 -0
- data/app/views/renalware/events/clinical_frailty_score/_inputs.html.slim +4 -0
- data/app/views/renalware/events/clinical_frailty_score/_toggled_cell.html.slim +8 -0
- data/app/views/renalware/events/events/_table.html.slim +1 -1
- data/app/views/renalware/hd/current_profile/_show.html.slim +1 -1
- data/app/views/renalware/hd/current_profile/show.html.slim +1 -1
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- data/spec/factories/patients/patients.rb +22 -1
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- data/spec/support/capybara_helper.rb +2 -4
- data/spec/support/letters_spec_helper.rb +1 -1
- data/spec/support/matchers/validate_timeliness_of.rb +1 -1
- data/spec/support/pathology_spec_helper.rb +1 -2
- data/spec/support/policy_spec_helper.rb +12 -0
- data/spec/support/shared_examples/supersedable_examples.rb +2 -2
- data/vendor/assets/javascripts/foundation/foundation.alert.js +43 -0
- data/vendor/assets/javascripts/foundation/foundation.dropdown.js +468 -0
- data/vendor/assets/javascripts/foundation/foundation.js +727 -0
- data/vendor/assets/javascripts/foundation/foundation.reveal.js +522 -0
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- data/vendor/assets/javascripts/foundation/foundation.tooltip.js +348 -0
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- data/vendor/assets/stylesheets/foundation/components/_dropdown.scss +269 -0
- data/vendor/assets/stylesheets/foundation/components/_forms.scss +601 -0
- data/vendor/assets/stylesheets/foundation/components/_global.scss +566 -0
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- metadata +293 -90
- data/app/components/renalware/events/biopsies_component.rb +0 -20
- data/app/views/renalware/pd/infection_organisms/_edit.html.slim.obsolete +0 -16
- data/app/views/renalware/transplants/donor_operations/_sections_nav.html.slim +0 -11
- data/app/views/renalware/transplants/donor_workups/_sections_nav.html.slim +0 -15
- data/app/views/renalware/transplants/recipient_operations/_sections_nav.html.slim +0 -14
- data/app/views/renalware/transplants/recipient_workups/_sections_nav.html.slim +0 -15
- data/lib/core_extensions/active_record/sort.rb +0 -52
- data/lib/renalware/version.rb +0 -5
- data/spec/support/pages/accesses/procedure_page.rb +0 -53
- data/spec/support/pages/accesses/profile_page.rb +0 -45
- data/spec/support/pages/admissions/consults_page.rb +0 -26
- data/spec/support/pages/clinical/allergy_page.rb +0 -74
- data/spec/support/pages/clinical/profile_page.rb +0 -28
- data/spec/support/pages/hd/prescription_administration_dialog.rb +0 -132
- data/spec/support/pages/letters/form.rb +0 -63
- data/spec/support/pages/letters/mailshots/form.rb +0 -58
- data/spec/support/pages/letters/patient_letters.rb +0 -20
- data/spec/support/pages/low_clearance/profile_page.rb +0 -70
- data/spec/support/pages/medications/home_delivery_dialog.rb +0 -77
- data/spec/support/pages/medications/prescription_fom.rb +0 -62
- data/spec/support/pages/page_object.rb +0 -10
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application.register("simple-toggle", SimpleToggleController)
|
41
|
+
application.register("tabs", TabsController)
|
42
|
+
application.register("pd-pet-chart", PDPetChartsController)
|
43
|
+
application.register("pathology-sparklines", PathologySparklinesController)
|
32
44
|
|
33
45
|
window.Chartkick.use(window.Highcharts)
|
@@ -6,7 +6,9 @@ module Renalware
|
|
6
6
|
module PatientsRansackHelper
|
7
7
|
extend ActiveSupport::Concern
|
8
8
|
|
9
|
+
# rubocop:disable Layout/LineLength
|
9
10
|
UUID_REGEXP = /[a-fA-F0-9]{8}-[a-fA-F0-9]{4}-[a-fA-F0-9]{4}-[a-fA-F0-9]{4}-[a-fA-F0-9]{12}/.freeze
|
11
|
+
# rubocop:enable Layout/LineLength
|
10
12
|
|
11
13
|
included do
|
12
14
|
class_eval do
|
@@ -0,0 +1,49 @@
|
|
1
|
+
# frozen_string_literal: true
|
2
|
+
|
3
|
+
module Renalware
|
4
|
+
module Sortable
|
5
|
+
extend ActiveSupport::Concern
|
6
|
+
|
7
|
+
# Assumes that the model has the #position attribute and adds 2 features to a model that
|
8
|
+
# includes it:
|
9
|
+
# 1. Set the :position to the next highest value when a new row is added. If the model has a
|
10
|
+
# position_sorting_scope scope or class method, this is used to narrow the range of records
|
11
|
+
# searched when finding the current max position
|
12
|
+
# 2. Add ability to sort rows based on an array of ids.
|
13
|
+
|
14
|
+
included do
|
15
|
+
before_create :set_position
|
16
|
+
end
|
17
|
+
|
18
|
+
class_methods do
|
19
|
+
# A controller #sort action might for instance invoke this class method on an object.
|
20
|
+
# The array of ids are the model to sort, and sorting is done by updating each model's
|
21
|
+
# position to reflect their place in the array.
|
22
|
+
def sort(ids)
|
23
|
+
Array(ids).each_with_index do |id, index|
|
24
|
+
where(id: id).update_all(["position=?", index + 1])
|
25
|
+
end
|
26
|
+
end
|
27
|
+
end
|
28
|
+
|
29
|
+
# Invoked by the callback when a record is created to set the initial value of #position.
|
30
|
+
# If no position_sorting_scope is defined on the model class, we set position to the max
|
31
|
+
# position in the whole table. If position_sorting_scope is provided we use it to refine the
|
32
|
+
# grouping and hence the max(position) found - for example to get the max position where
|
33
|
+
# patient_id = 123
|
34
|
+
#
|
35
|
+
# Example scope in a model:
|
36
|
+
# scope :position_sorting_scope, ->(problem) { where(patient_id: problem.patient.id) }
|
37
|
+
#
|
38
|
+
def set_position
|
39
|
+
return unless respond_to?(:position)
|
40
|
+
|
41
|
+
scope = if self.class.respond_to?(:position_sorting_scope)
|
42
|
+
self.class.position_sorting_scope(self)
|
43
|
+
else
|
44
|
+
self.class
|
45
|
+
end
|
46
|
+
self.position = (scope.maximum(:position) || 0) + 1
|
47
|
+
end
|
48
|
+
end
|
49
|
+
end
|
@@ -14,7 +14,11 @@ module Renalware
|
|
14
14
|
belongs_to :type, class_name: "Type"
|
15
15
|
|
16
16
|
has_document class_name: "Renalware::Accesses::AssessmentDocument"
|
17
|
-
|
17
|
+
|
18
|
+
has_paper_trail(
|
19
|
+
versions: { class_name: "Renalware::Accesses::Version" },
|
20
|
+
on: [:create, :update, :destroy]
|
21
|
+
)
|
18
22
|
|
19
23
|
scope :ordered, -> { order(performed_on: :desc) }
|
20
24
|
|
@@ -19,7 +19,7 @@ module Renalware
|
|
19
19
|
end
|
20
20
|
|
21
21
|
scope :with_current_plan, lambda {
|
22
|
-
joins(<<-SQL)
|
22
|
+
joins(<<-SQL.squish)
|
23
23
|
left outer join access_plans on access_plans.patient_id = patients.id
|
24
24
|
and access_plans.terminated_at is null
|
25
25
|
left outer join access_plan_types
|
@@ -31,7 +31,7 @@ module Renalware
|
|
31
31
|
# needs to choose just one, otherwise queries that merge in this scope
|
32
32
|
# can have duplicates, or worse, broken pagination.
|
33
33
|
scope :with_profile, lambda {
|
34
|
-
joins(<<-SQL)
|
34
|
+
joins(<<-SQL.squish)
|
35
35
|
left outer join (
|
36
36
|
select distinct on (patient_id) * from access_profiles
|
37
37
|
where
|
@@ -9,7 +9,7 @@ module Renalware
|
|
9
9
|
|
10
10
|
belongs_to :patient, touch: true
|
11
11
|
belongs_to :plan_type
|
12
|
-
belongs_to :decided_by, class_name: "User"
|
12
|
+
belongs_to :decided_by, class_name: "User"
|
13
13
|
|
14
14
|
validates :plan_type, presence: true
|
15
15
|
validates :decided_by, presence: true
|
@@ -12,7 +12,10 @@ module Renalware
|
|
12
12
|
belongs_to :type, class_name: "Type"
|
13
13
|
belongs_to :pd_catheter_insertion_technique, class_name: "CatheterInsertionTechnique"
|
14
14
|
|
15
|
-
has_paper_trail
|
15
|
+
has_paper_trail(
|
16
|
+
versions: { class_name: "Renalware::Accesses::Version" },
|
17
|
+
on: [:create, :update, :destroy]
|
18
|
+
)
|
16
19
|
|
17
20
|
scope :ordered, -> { order(performed_on: :desc) }
|
18
21
|
|
@@ -11,7 +11,10 @@ module Renalware
|
|
11
11
|
belongs_to :patient, touch: true
|
12
12
|
belongs_to :type, class_name: "Type"
|
13
13
|
|
14
|
-
has_paper_trail
|
14
|
+
has_paper_trail(
|
15
|
+
versions: { class_name: "Renalware::Accesses::Version" },
|
16
|
+
on: [:create, :update, :destroy]
|
17
|
+
)
|
15
18
|
|
16
19
|
scope :ordered, -> { order(formed_on: :desc) }
|
17
20
|
scope :current, lambda {
|
@@ -16,10 +16,13 @@ module Renalware
|
|
16
16
|
}
|
17
17
|
|
18
18
|
belongs_to :patient, class_name: "Renalware::Clinical::Patient", touch: true
|
19
|
-
belongs_to :assessor, class_name: "User"
|
19
|
+
belongs_to :assessor, class_name: "User"
|
20
20
|
belongs_to :modality_description, class_name: "Modalities::Description"
|
21
21
|
|
22
|
-
has_paper_trail
|
22
|
+
has_paper_trail(
|
23
|
+
versions: { class_name: "Renalware::Clinical::Version" },
|
24
|
+
on: [:create, :update, :destroy]
|
25
|
+
)
|
23
26
|
|
24
27
|
scope :ordered, -> { order(assessed_on: :desc, created_at: :desc) }
|
25
28
|
|
@@ -10,9 +10,12 @@ module Renalware
|
|
10
10
|
include Accountable
|
11
11
|
|
12
12
|
belongs_to :patient, class_name: "Renalware::Clinical::Patient", touch: true
|
13
|
-
belongs_to :assessor, class_name: "User"
|
13
|
+
belongs_to :assessor, class_name: "User"
|
14
14
|
|
15
|
-
has_paper_trail
|
15
|
+
has_paper_trail(
|
16
|
+
versions: { class_name: "Renalware::Clinical::Version" },
|
17
|
+
on: [:create, :update, :destroy]
|
18
|
+
)
|
16
19
|
|
17
20
|
scope :ordered, -> { order(assessed_on: :desc, created_at: :desc) }
|
18
21
|
|
@@ -0,0 +1,40 @@
|
|
1
|
+
# frozen_string_literal: true
|
2
|
+
|
3
|
+
require_dependency "renalware/clinics"
|
4
|
+
|
5
|
+
# The body surface area (BSA) of a patient calculated using DuBois/DuBois
|
6
|
+
# BSA = 0.007184 * Height^0.725 * Weight^0.425
|
7
|
+
# Resources:
|
8
|
+
# - Calculators
|
9
|
+
# - https://www.msdmanuals.com/en-gb/medical-calculators/BodySurfaceArea.htm
|
10
|
+
# - http://www.medcalc.com/body.html
|
11
|
+
module Renalware
|
12
|
+
module Clinics
|
13
|
+
class BodySurfaceArea
|
14
|
+
pattr_initialize [:weight!, :height!]
|
15
|
+
|
16
|
+
def self.calculate(weight:, height:, dp: 2)
|
17
|
+
new(weight: weight, height: height).calculate(dp: dp)
|
18
|
+
end
|
19
|
+
|
20
|
+
def calculate(dp: 2)
|
21
|
+
return if height_cm.zero?
|
22
|
+
return if weight_kg.zero?
|
23
|
+
|
24
|
+
# NB ** is ruby syntax for power of (^)
|
25
|
+
result = 0.007184 * (weight_kg**0.425) * (height_cm**0.725)
|
26
|
+
result.round(dp)
|
27
|
+
end
|
28
|
+
|
29
|
+
private
|
30
|
+
|
31
|
+
def height_cm
|
32
|
+
height.to_f * 100
|
33
|
+
end
|
34
|
+
|
35
|
+
def weight_kg
|
36
|
+
weight.to_f
|
37
|
+
end
|
38
|
+
end
|
39
|
+
end
|
40
|
+
end
|
@@ -7,7 +7,11 @@ module Renalware
|
|
7
7
|
module Clinics
|
8
8
|
class ClinicVisit < ApplicationRecord
|
9
9
|
self.table_name = :clinic_visits
|
10
|
-
|
10
|
+
|
11
|
+
has_paper_trail(
|
12
|
+
versions: { class_name: "Renalware::Clinics::Version" },
|
13
|
+
on: [:create, :update, :destroy]
|
14
|
+
)
|
11
15
|
|
12
16
|
include Accountable
|
13
17
|
include PatientScope
|
@@ -15,7 +19,7 @@ module Renalware
|
|
15
19
|
|
16
20
|
belongs_to :patient, touch: true
|
17
21
|
belongs_to :clinic
|
18
|
-
has_many :clinic_letters
|
22
|
+
has_many :clinic_letters # TODO: remove as possibly redundant
|
19
23
|
|
20
24
|
validates :date, presence: true
|
21
25
|
validates :clinic, presence: true
|
@@ -31,10 +35,11 @@ module Renalware
|
|
31
35
|
|
32
36
|
scope :ordered, -> { order(date: :desc, created_at: :desc) }
|
33
37
|
scope :most_recent_for_patient, ->(patient) { for_patient(patient).ordered.limit(1) }
|
38
|
+
scope :where_weight_was_measured, -> { where("weight > 0") }
|
34
39
|
|
35
|
-
|
36
|
-
|
37
|
-
|
40
|
+
before_save :calculate_body_surface_area
|
41
|
+
before_save :calculate_total_body_water
|
42
|
+
before_save :calculate_bmi
|
38
43
|
|
39
44
|
def bp
|
40
45
|
return unless systolic_bp.present? && diastolic_bp.present?
|
@@ -68,6 +73,26 @@ module Renalware
|
|
68
73
|
def datetime_from_date_and_time
|
69
74
|
DateTime.new(date.year, date.month, date.day, time.hour, time.min, 0, time.zone)
|
70
75
|
end
|
76
|
+
|
77
|
+
def calculate_body_surface_area
|
78
|
+
self.body_surface_area = BodySurfaceArea.calculate(
|
79
|
+
height: height,
|
80
|
+
weight: weight
|
81
|
+
)
|
82
|
+
end
|
83
|
+
|
84
|
+
def calculate_total_body_water
|
85
|
+
self.total_body_water = TotalBodyWater.calculate(
|
86
|
+
height: height,
|
87
|
+
weight: weight,
|
88
|
+
age: patient.age,
|
89
|
+
sex: patient.sex
|
90
|
+
)
|
91
|
+
end
|
92
|
+
|
93
|
+
def calculate_bmi
|
94
|
+
self.bmi = BMI.new(weight: weight, height: height).to_f
|
95
|
+
end
|
71
96
|
end
|
72
97
|
end
|
73
98
|
end
|
@@ -0,0 +1,63 @@
|
|
1
|
+
# frozen_string_literal: true
|
2
|
+
|
3
|
+
require_dependency "renalware/clinics"
|
4
|
+
|
5
|
+
# Total Body Water (TBW) calcuated using WATSON
|
6
|
+
# References:
|
7
|
+
# - https://qxmd.com/calculate/calculator_344/total-body-water-watson-formula
|
8
|
+
#
|
9
|
+
# Total Body Water
|
10
|
+
# TBW = 2.447 - 0.09156 X age + 0.1074 X height + 0.3362 X weight
|
11
|
+
# (females) TBW = -2.097 + 0.1069 X height + 0.2466 X weight
|
12
|
+
#
|
13
|
+
# Water in Litres
|
14
|
+
# Age in years
|
15
|
+
# Height in cm
|
16
|
+
# Weight in kg
|
17
|
+
module Renalware
|
18
|
+
module Clinics
|
19
|
+
class TotalBodyWater
|
20
|
+
pattr_initialize [:height!, :weight!, :age, :sex]
|
21
|
+
|
22
|
+
NOTHING = nil
|
23
|
+
SEX_PROC_MAP = {
|
24
|
+
M: ->(age:, height:, weight:) { 2.447 - 0.09156 * age + 0.1074 * height + 0.3362 * weight },
|
25
|
+
F: ->(height:, weight:, **) { -2.097 + 0.1069 * height + 0.2466 * weight }
|
26
|
+
}.freeze
|
27
|
+
NOOP = ->(**) { NullObject.instance }
|
28
|
+
|
29
|
+
def self.calculate(dp: 2, **args)
|
30
|
+
new(**args).calculate(dp: dp)
|
31
|
+
end
|
32
|
+
|
33
|
+
def calculate(dp: 2)
|
34
|
+
return NOTHING if height_cm.zero?
|
35
|
+
return NOTHING if weight_kg.zero?
|
36
|
+
return NOTHING if age.to_i.zero?
|
37
|
+
|
38
|
+
proc_for_sex = SEX_PROC_MAP.fetch(sex_sym, NOOP)
|
39
|
+
|
40
|
+
proc_for_sex.call(
|
41
|
+
age: age,
|
42
|
+
height: height_cm,
|
43
|
+
weight: weight_kg
|
44
|
+
).round(dp)
|
45
|
+
end
|
46
|
+
|
47
|
+
private
|
48
|
+
|
49
|
+
# Note sex can be nil but here that would evaluate to :""
|
50
|
+
def sex_sym
|
51
|
+
sex.to_s&.to_sym
|
52
|
+
end
|
53
|
+
|
54
|
+
def height_cm
|
55
|
+
height.to_f * 100
|
56
|
+
end
|
57
|
+
|
58
|
+
def weight_kg
|
59
|
+
weight.to_f
|
60
|
+
end
|
61
|
+
end
|
62
|
+
end
|
63
|
+
end
|
@@ -0,0 +1,24 @@
|
|
1
|
+
# frozen_string_literal: true
|
2
|
+
|
3
|
+
require_dependency "renalware/events"
|
4
|
+
require "document/base"
|
5
|
+
require "document/embedded"
|
6
|
+
require "document/enum"
|
7
|
+
|
8
|
+
module Renalware
|
9
|
+
module Events
|
10
|
+
class AdvancedCarePlan < Events::Event
|
11
|
+
include Document::Base
|
12
|
+
|
13
|
+
class Document < Document::Embedded
|
14
|
+
attribute :state, ::Document::Enum # See i18n for options
|
15
|
+
validates :state, presence: true
|
16
|
+
end
|
17
|
+
has_document
|
18
|
+
|
19
|
+
def partial_for(partial_type)
|
20
|
+
File.join("renalware/events/advanced_care_plans", partial_type)
|
21
|
+
end
|
22
|
+
end
|
23
|
+
end
|
24
|
+
end
|
@@ -0,0 +1,24 @@
|
|
1
|
+
# frozen_string_literal: true
|
2
|
+
|
3
|
+
require_dependency "renalware/events"
|
4
|
+
require "document/base"
|
5
|
+
require "document/embedded"
|
6
|
+
require "document/enum"
|
7
|
+
|
8
|
+
module Renalware
|
9
|
+
module Events
|
10
|
+
class ClinicalFrailtyScore < Events::Event
|
11
|
+
include Document::Base
|
12
|
+
|
13
|
+
class Document < Document::Embedded
|
14
|
+
attribute :score, ::Document::Enum # See i18n for options
|
15
|
+
validates :score, presence: true, numericality: true
|
16
|
+
end
|
17
|
+
has_document
|
18
|
+
|
19
|
+
def partial_for(partial_type)
|
20
|
+
File.join("renalware/events/clinical_frailty_score", partial_type)
|
21
|
+
end
|
22
|
+
end
|
23
|
+
end
|
24
|
+
end
|
@@ -34,7 +34,7 @@ module Renalware
|
|
34
34
|
end
|
35
35
|
|
36
36
|
def uploads_dir
|
37
|
-
Rails.root.join("tmp
|
37
|
+
Rails.root.join("tmp/uploads").tap do |uploads_path|
|
38
38
|
warn "using upload path #{uploads_path}"
|
39
39
|
Dir.mkdir(uploads_path) unless Dir.exist?(uploads_path)
|
40
40
|
end
|