datasketches 0.1.0
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- checksums.yaml +7 -0
- data/CHANGELOG.md +3 -0
- data/LICENSE +310 -0
- data/NOTICE +11 -0
- data/README.md +126 -0
- data/ext/datasketches/cpc_wrapper.cpp +50 -0
- data/ext/datasketches/ext.cpp +12 -0
- data/ext/datasketches/extconf.rb +11 -0
- data/ext/datasketches/hll_wrapper.cpp +69 -0
- data/lib/datasketches.rb +9 -0
- data/lib/datasketches/version.rb +3 -0
- data/vendor/datasketches-cpp/CMakeLists.txt +126 -0
- data/vendor/datasketches-cpp/LICENSE +311 -0
- data/vendor/datasketches-cpp/MANIFEST.in +19 -0
- data/vendor/datasketches-cpp/NOTICE +11 -0
- data/vendor/datasketches-cpp/README.md +42 -0
- data/vendor/datasketches-cpp/common/CMakeLists.txt +45 -0
- data/vendor/datasketches-cpp/common/include/MurmurHash3.h +173 -0
- data/vendor/datasketches-cpp/common/include/binomial_bounds.hpp +458 -0
- data/vendor/datasketches-cpp/common/include/bounds_binomial_proportions.hpp +291 -0
- data/vendor/datasketches-cpp/common/include/ceiling_power_of_2.hpp +41 -0
- data/vendor/datasketches-cpp/common/include/common_defs.hpp +51 -0
- data/vendor/datasketches-cpp/common/include/conditional_back_inserter.hpp +68 -0
- data/vendor/datasketches-cpp/common/include/conditional_forward.hpp +70 -0
- data/vendor/datasketches-cpp/common/include/count_zeros.hpp +114 -0
- data/vendor/datasketches-cpp/common/include/inv_pow2_table.hpp +107 -0
- data/vendor/datasketches-cpp/common/include/memory_operations.hpp +57 -0
- data/vendor/datasketches-cpp/common/include/serde.hpp +196 -0
- data/vendor/datasketches-cpp/common/test/CMakeLists.txt +38 -0
- data/vendor/datasketches-cpp/common/test/catch.hpp +17618 -0
- data/vendor/datasketches-cpp/common/test/catch_runner.cpp +7 -0
- data/vendor/datasketches-cpp/common/test/test_allocator.cpp +31 -0
- data/vendor/datasketches-cpp/common/test/test_allocator.hpp +108 -0
- data/vendor/datasketches-cpp/common/test/test_runner.cpp +29 -0
- data/vendor/datasketches-cpp/common/test/test_type.hpp +137 -0
- data/vendor/datasketches-cpp/cpc/CMakeLists.txt +74 -0
- data/vendor/datasketches-cpp/cpc/include/compression_data.hpp +6022 -0
- data/vendor/datasketches-cpp/cpc/include/cpc_common.hpp +62 -0
- data/vendor/datasketches-cpp/cpc/include/cpc_compressor.hpp +147 -0
- data/vendor/datasketches-cpp/cpc/include/cpc_compressor_impl.hpp +742 -0
- data/vendor/datasketches-cpp/cpc/include/cpc_confidence.hpp +167 -0
- data/vendor/datasketches-cpp/cpc/include/cpc_sketch.hpp +311 -0
- data/vendor/datasketches-cpp/cpc/include/cpc_sketch_impl.hpp +810 -0
- data/vendor/datasketches-cpp/cpc/include/cpc_union.hpp +102 -0
- data/vendor/datasketches-cpp/cpc/include/cpc_union_impl.hpp +346 -0
- data/vendor/datasketches-cpp/cpc/include/cpc_util.hpp +137 -0
- data/vendor/datasketches-cpp/cpc/include/icon_estimator.hpp +274 -0
- data/vendor/datasketches-cpp/cpc/include/kxp_byte_lookup.hpp +81 -0
- data/vendor/datasketches-cpp/cpc/include/u32_table.hpp +84 -0
- data/vendor/datasketches-cpp/cpc/include/u32_table_impl.hpp +266 -0
- data/vendor/datasketches-cpp/cpc/test/CMakeLists.txt +44 -0
- data/vendor/datasketches-cpp/cpc/test/compression_test.cpp +67 -0
- data/vendor/datasketches-cpp/cpc/test/cpc_sketch_test.cpp +381 -0
- data/vendor/datasketches-cpp/cpc/test/cpc_union_test.cpp +149 -0
- data/vendor/datasketches-cpp/fi/CMakeLists.txt +54 -0
- data/vendor/datasketches-cpp/fi/include/frequent_items_sketch.hpp +319 -0
- data/vendor/datasketches-cpp/fi/include/frequent_items_sketch_impl.hpp +484 -0
- data/vendor/datasketches-cpp/fi/include/reverse_purge_hash_map.hpp +114 -0
- data/vendor/datasketches-cpp/fi/include/reverse_purge_hash_map_impl.hpp +345 -0
- data/vendor/datasketches-cpp/fi/test/CMakeLists.txt +44 -0
- data/vendor/datasketches-cpp/fi/test/frequent_items_sketch_custom_type_test.cpp +84 -0
- data/vendor/datasketches-cpp/fi/test/frequent_items_sketch_test.cpp +360 -0
- data/vendor/datasketches-cpp/fi/test/items_sketch_string_from_java.sk +0 -0
- data/vendor/datasketches-cpp/fi/test/items_sketch_string_utf8_from_java.sk +0 -0
- data/vendor/datasketches-cpp/fi/test/longs_sketch_from_java.sk +0 -0
- data/vendor/datasketches-cpp/fi/test/reverse_purge_hash_map_test.cpp +47 -0
- data/vendor/datasketches-cpp/hll/CMakeLists.txt +92 -0
- data/vendor/datasketches-cpp/hll/include/AuxHashMap-internal.hpp +303 -0
- data/vendor/datasketches-cpp/hll/include/AuxHashMap.hpp +83 -0
- data/vendor/datasketches-cpp/hll/include/CompositeInterpolationXTable-internal.hpp +811 -0
- data/vendor/datasketches-cpp/hll/include/CompositeInterpolationXTable.hpp +40 -0
- data/vendor/datasketches-cpp/hll/include/CouponHashSet-internal.hpp +291 -0
- data/vendor/datasketches-cpp/hll/include/CouponHashSet.hpp +59 -0
- data/vendor/datasketches-cpp/hll/include/CouponList-internal.hpp +417 -0
- data/vendor/datasketches-cpp/hll/include/CouponList.hpp +91 -0
- data/vendor/datasketches-cpp/hll/include/CubicInterpolation-internal.hpp +233 -0
- data/vendor/datasketches-cpp/hll/include/CubicInterpolation.hpp +43 -0
- data/vendor/datasketches-cpp/hll/include/HarmonicNumbers-internal.hpp +90 -0
- data/vendor/datasketches-cpp/hll/include/HarmonicNumbers.hpp +48 -0
- data/vendor/datasketches-cpp/hll/include/Hll4Array-internal.hpp +335 -0
- data/vendor/datasketches-cpp/hll/include/Hll4Array.hpp +69 -0
- data/vendor/datasketches-cpp/hll/include/Hll6Array-internal.hpp +124 -0
- data/vendor/datasketches-cpp/hll/include/Hll6Array.hpp +55 -0
- data/vendor/datasketches-cpp/hll/include/Hll8Array-internal.hpp +158 -0
- data/vendor/datasketches-cpp/hll/include/Hll8Array.hpp +56 -0
- data/vendor/datasketches-cpp/hll/include/HllArray-internal.hpp +706 -0
- data/vendor/datasketches-cpp/hll/include/HllArray.hpp +136 -0
- data/vendor/datasketches-cpp/hll/include/HllSketch-internal.hpp +462 -0
- data/vendor/datasketches-cpp/hll/include/HllSketchImpl-internal.hpp +149 -0
- data/vendor/datasketches-cpp/hll/include/HllSketchImpl.hpp +85 -0
- data/vendor/datasketches-cpp/hll/include/HllSketchImplFactory.hpp +170 -0
- data/vendor/datasketches-cpp/hll/include/HllUnion-internal.hpp +287 -0
- data/vendor/datasketches-cpp/hll/include/HllUtil.hpp +239 -0
- data/vendor/datasketches-cpp/hll/include/RelativeErrorTables-internal.hpp +112 -0
- data/vendor/datasketches-cpp/hll/include/RelativeErrorTables.hpp +46 -0
- data/vendor/datasketches-cpp/hll/include/coupon_iterator-internal.hpp +56 -0
- data/vendor/datasketches-cpp/hll/include/coupon_iterator.hpp +43 -0
- data/vendor/datasketches-cpp/hll/include/hll.hpp +669 -0
- data/vendor/datasketches-cpp/hll/include/hll.private.hpp +32 -0
- data/vendor/datasketches-cpp/hll/test/AuxHashMapTest.cpp +79 -0
- data/vendor/datasketches-cpp/hll/test/CMakeLists.txt +51 -0
- data/vendor/datasketches-cpp/hll/test/CouponHashSetTest.cpp +130 -0
- data/vendor/datasketches-cpp/hll/test/CouponListTest.cpp +181 -0
- data/vendor/datasketches-cpp/hll/test/CrossCountingTest.cpp +93 -0
- data/vendor/datasketches-cpp/hll/test/HllArrayTest.cpp +191 -0
- data/vendor/datasketches-cpp/hll/test/HllSketchTest.cpp +389 -0
- data/vendor/datasketches-cpp/hll/test/HllUnionTest.cpp +313 -0
- data/vendor/datasketches-cpp/hll/test/IsomorphicTest.cpp +141 -0
- data/vendor/datasketches-cpp/hll/test/TablesTest.cpp +44 -0
- data/vendor/datasketches-cpp/hll/test/ToFromByteArrayTest.cpp +168 -0
- data/vendor/datasketches-cpp/hll/test/array6_from_java.sk +0 -0
- data/vendor/datasketches-cpp/hll/test/compact_array4_from_java.sk +0 -0
- data/vendor/datasketches-cpp/hll/test/compact_set_from_java.sk +0 -0
- data/vendor/datasketches-cpp/hll/test/list_from_java.sk +0 -0
- data/vendor/datasketches-cpp/hll/test/updatable_array4_from_java.sk +0 -0
- data/vendor/datasketches-cpp/hll/test/updatable_set_from_java.sk +0 -0
- data/vendor/datasketches-cpp/kll/CMakeLists.txt +58 -0
- data/vendor/datasketches-cpp/kll/include/kll_helper.hpp +150 -0
- data/vendor/datasketches-cpp/kll/include/kll_helper_impl.hpp +319 -0
- data/vendor/datasketches-cpp/kll/include/kll_quantile_calculator.hpp +67 -0
- data/vendor/datasketches-cpp/kll/include/kll_quantile_calculator_impl.hpp +169 -0
- data/vendor/datasketches-cpp/kll/include/kll_sketch.hpp +559 -0
- data/vendor/datasketches-cpp/kll/include/kll_sketch_impl.hpp +1131 -0
- data/vendor/datasketches-cpp/kll/test/CMakeLists.txt +44 -0
- data/vendor/datasketches-cpp/kll/test/kll_sketch_custom_type_test.cpp +154 -0
- data/vendor/datasketches-cpp/kll/test/kll_sketch_float_one_item_v1.sk +0 -0
- data/vendor/datasketches-cpp/kll/test/kll_sketch_from_java.sk +0 -0
- data/vendor/datasketches-cpp/kll/test/kll_sketch_test.cpp +685 -0
- data/vendor/datasketches-cpp/kll/test/kll_sketch_validation.cpp +229 -0
- data/vendor/datasketches-cpp/pyproject.toml +17 -0
- data/vendor/datasketches-cpp/python/CMakeLists.txt +61 -0
- data/vendor/datasketches-cpp/python/README.md +78 -0
- data/vendor/datasketches-cpp/python/jupyter/CPCSketch.ipynb +345 -0
- data/vendor/datasketches-cpp/python/jupyter/FrequentItemsSketch.ipynb +354 -0
- data/vendor/datasketches-cpp/python/jupyter/HLLSketch.ipynb +346 -0
- data/vendor/datasketches-cpp/python/jupyter/KLLSketch.ipynb +463 -0
- data/vendor/datasketches-cpp/python/jupyter/ThetaSketchNotebook.ipynb +396 -0
- data/vendor/datasketches-cpp/python/src/__init__.py +2 -0
- data/vendor/datasketches-cpp/python/src/cpc_wrapper.cpp +90 -0
- data/vendor/datasketches-cpp/python/src/datasketches.cpp +40 -0
- data/vendor/datasketches-cpp/python/src/fi_wrapper.cpp +123 -0
- data/vendor/datasketches-cpp/python/src/hll_wrapper.cpp +136 -0
- data/vendor/datasketches-cpp/python/src/kll_wrapper.cpp +209 -0
- data/vendor/datasketches-cpp/python/src/theta_wrapper.cpp +162 -0
- data/vendor/datasketches-cpp/python/src/vector_of_kll.cpp +488 -0
- data/vendor/datasketches-cpp/python/src/vo_wrapper.cpp +140 -0
- data/vendor/datasketches-cpp/python/tests/__init__.py +0 -0
- data/vendor/datasketches-cpp/python/tests/cpc_test.py +64 -0
- data/vendor/datasketches-cpp/python/tests/fi_test.py +110 -0
- data/vendor/datasketches-cpp/python/tests/hll_test.py +131 -0
- data/vendor/datasketches-cpp/python/tests/kll_test.py +119 -0
- data/vendor/datasketches-cpp/python/tests/theta_test.py +121 -0
- data/vendor/datasketches-cpp/python/tests/vector_of_kll_test.py +148 -0
- data/vendor/datasketches-cpp/python/tests/vo_test.py +101 -0
- data/vendor/datasketches-cpp/sampling/CMakeLists.txt +48 -0
- data/vendor/datasketches-cpp/sampling/include/var_opt_sketch.hpp +392 -0
- data/vendor/datasketches-cpp/sampling/include/var_opt_sketch_impl.hpp +1752 -0
- data/vendor/datasketches-cpp/sampling/include/var_opt_union.hpp +239 -0
- data/vendor/datasketches-cpp/sampling/include/var_opt_union_impl.hpp +645 -0
- data/vendor/datasketches-cpp/sampling/test/CMakeLists.txt +43 -0
- data/vendor/datasketches-cpp/sampling/test/binaries_from_java.txt +67 -0
- data/vendor/datasketches-cpp/sampling/test/var_opt_sketch_test.cpp +509 -0
- data/vendor/datasketches-cpp/sampling/test/var_opt_union_test.cpp +358 -0
- data/vendor/datasketches-cpp/sampling/test/varopt_sketch_long_sampling.sk +0 -0
- data/vendor/datasketches-cpp/sampling/test/varopt_sketch_string_exact.sk +0 -0
- data/vendor/datasketches-cpp/sampling/test/varopt_union_double_sampling.sk +0 -0
- data/vendor/datasketches-cpp/setup.py +94 -0
- data/vendor/datasketches-cpp/theta/CMakeLists.txt +57 -0
- data/vendor/datasketches-cpp/theta/include/theta_a_not_b.hpp +73 -0
- data/vendor/datasketches-cpp/theta/include/theta_a_not_b_impl.hpp +83 -0
- data/vendor/datasketches-cpp/theta/include/theta_intersection.hpp +88 -0
- data/vendor/datasketches-cpp/theta/include/theta_intersection_impl.hpp +130 -0
- data/vendor/datasketches-cpp/theta/include/theta_sketch.hpp +533 -0
- data/vendor/datasketches-cpp/theta/include/theta_sketch_impl.hpp +939 -0
- data/vendor/datasketches-cpp/theta/include/theta_union.hpp +122 -0
- data/vendor/datasketches-cpp/theta/include/theta_union_impl.hpp +109 -0
- data/vendor/datasketches-cpp/theta/test/CMakeLists.txt +45 -0
- data/vendor/datasketches-cpp/theta/test/theta_a_not_b_test.cpp +244 -0
- data/vendor/datasketches-cpp/theta/test/theta_compact_empty_from_java.sk +0 -0
- data/vendor/datasketches-cpp/theta/test/theta_compact_estimation_from_java.sk +0 -0
- data/vendor/datasketches-cpp/theta/test/theta_compact_single_item_from_java.sk +0 -0
- data/vendor/datasketches-cpp/theta/test/theta_intersection_test.cpp +218 -0
- data/vendor/datasketches-cpp/theta/test/theta_sketch_test.cpp +438 -0
- data/vendor/datasketches-cpp/theta/test/theta_union_test.cpp +97 -0
- data/vendor/datasketches-cpp/theta/test/theta_update_empty_from_java.sk +0 -0
- data/vendor/datasketches-cpp/theta/test/theta_update_estimation_from_java.sk +0 -0
- data/vendor/datasketches-cpp/tuple/CMakeLists.txt +104 -0
- data/vendor/datasketches-cpp/tuple/include/array_of_doubles_a_not_b.hpp +52 -0
- data/vendor/datasketches-cpp/tuple/include/array_of_doubles_a_not_b_impl.hpp +32 -0
- data/vendor/datasketches-cpp/tuple/include/array_of_doubles_intersection.hpp +52 -0
- data/vendor/datasketches-cpp/tuple/include/array_of_doubles_intersection_impl.hpp +31 -0
- data/vendor/datasketches-cpp/tuple/include/array_of_doubles_sketch.hpp +179 -0
- data/vendor/datasketches-cpp/tuple/include/array_of_doubles_sketch_impl.hpp +238 -0
- data/vendor/datasketches-cpp/tuple/include/array_of_doubles_union.hpp +81 -0
- data/vendor/datasketches-cpp/tuple/include/array_of_doubles_union_impl.hpp +43 -0
- data/vendor/datasketches-cpp/tuple/include/bounds_on_ratios_in_sampled_sets.hpp +135 -0
- data/vendor/datasketches-cpp/tuple/include/bounds_on_ratios_in_theta_sketched_sets.hpp +135 -0
- data/vendor/datasketches-cpp/tuple/include/jaccard_similarity.hpp +172 -0
- data/vendor/datasketches-cpp/tuple/include/theta_a_not_b_experimental.hpp +53 -0
- data/vendor/datasketches-cpp/tuple/include/theta_a_not_b_experimental_impl.hpp +33 -0
- data/vendor/datasketches-cpp/tuple/include/theta_comparators.hpp +48 -0
- data/vendor/datasketches-cpp/tuple/include/theta_constants.hpp +34 -0
- data/vendor/datasketches-cpp/tuple/include/theta_helpers.hpp +54 -0
- data/vendor/datasketches-cpp/tuple/include/theta_intersection_base.hpp +59 -0
- data/vendor/datasketches-cpp/tuple/include/theta_intersection_base_impl.hpp +121 -0
- data/vendor/datasketches-cpp/tuple/include/theta_intersection_experimental.hpp +78 -0
- data/vendor/datasketches-cpp/tuple/include/theta_intersection_experimental_impl.hpp +43 -0
- data/vendor/datasketches-cpp/tuple/include/theta_set_difference_base.hpp +54 -0
- data/vendor/datasketches-cpp/tuple/include/theta_set_difference_base_impl.hpp +80 -0
- data/vendor/datasketches-cpp/tuple/include/theta_sketch_experimental.hpp +393 -0
- data/vendor/datasketches-cpp/tuple/include/theta_sketch_experimental_impl.hpp +481 -0
- data/vendor/datasketches-cpp/tuple/include/theta_union_base.hpp +60 -0
- data/vendor/datasketches-cpp/tuple/include/theta_union_base_impl.hpp +84 -0
- data/vendor/datasketches-cpp/tuple/include/theta_union_experimental.hpp +88 -0
- data/vendor/datasketches-cpp/tuple/include/theta_union_experimental_impl.hpp +47 -0
- data/vendor/datasketches-cpp/tuple/include/theta_update_sketch_base.hpp +259 -0
- data/vendor/datasketches-cpp/tuple/include/theta_update_sketch_base_impl.hpp +389 -0
- data/vendor/datasketches-cpp/tuple/include/tuple_a_not_b.hpp +57 -0
- data/vendor/datasketches-cpp/tuple/include/tuple_a_not_b_impl.hpp +33 -0
- data/vendor/datasketches-cpp/tuple/include/tuple_intersection.hpp +104 -0
- data/vendor/datasketches-cpp/tuple/include/tuple_intersection_impl.hpp +43 -0
- data/vendor/datasketches-cpp/tuple/include/tuple_sketch.hpp +496 -0
- data/vendor/datasketches-cpp/tuple/include/tuple_sketch_impl.hpp +587 -0
- data/vendor/datasketches-cpp/tuple/include/tuple_union.hpp +109 -0
- data/vendor/datasketches-cpp/tuple/include/tuple_union_impl.hpp +47 -0
- data/vendor/datasketches-cpp/tuple/test/CMakeLists.txt +53 -0
- data/vendor/datasketches-cpp/tuple/test/aod_1_compact_empty_from_java.sk +1 -0
- data/vendor/datasketches-cpp/tuple/test/aod_1_compact_estimation_from_java.sk +0 -0
- data/vendor/datasketches-cpp/tuple/test/aod_1_compact_non_empty_no_entries_from_java.sk +0 -0
- data/vendor/datasketches-cpp/tuple/test/aod_2_compact_exact_from_java.sk +0 -0
- data/vendor/datasketches-cpp/tuple/test/aod_3_compact_empty_from_java.sk +1 -0
- data/vendor/datasketches-cpp/tuple/test/array_of_doubles_sketch_test.cpp +298 -0
- data/vendor/datasketches-cpp/tuple/test/theta_a_not_b_experimental_test.cpp +250 -0
- data/vendor/datasketches-cpp/tuple/test/theta_compact_empty_from_java.sk +0 -0
- data/vendor/datasketches-cpp/tuple/test/theta_compact_estimation_from_java.sk +0 -0
- data/vendor/datasketches-cpp/tuple/test/theta_compact_single_item_from_java.sk +0 -0
- data/vendor/datasketches-cpp/tuple/test/theta_intersection_experimental_test.cpp +224 -0
- data/vendor/datasketches-cpp/tuple/test/theta_jaccard_similarity_test.cpp +144 -0
- data/vendor/datasketches-cpp/tuple/test/theta_sketch_experimental_test.cpp +247 -0
- data/vendor/datasketches-cpp/tuple/test/theta_union_experimental_test.cpp +44 -0
- data/vendor/datasketches-cpp/tuple/test/tuple_a_not_b_test.cpp +289 -0
- data/vendor/datasketches-cpp/tuple/test/tuple_intersection_test.cpp +235 -0
- data/vendor/datasketches-cpp/tuple/test/tuple_jaccard_similarity_test.cpp +98 -0
- data/vendor/datasketches-cpp/tuple/test/tuple_sketch_allocation_test.cpp +102 -0
- data/vendor/datasketches-cpp/tuple/test/tuple_sketch_test.cpp +249 -0
- data/vendor/datasketches-cpp/tuple/test/tuple_union_test.cpp +187 -0
- metadata +302 -0
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/*
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* Licensed to the Apache Software Foundation (ASF) under one
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* or more contributor license agreements. See the NOTICE file
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* distributed with this work for additional information
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* regarding copyright ownership. The ASF licenses this file
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* to you under the Apache License, Version 2.0 (the
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* "License"); you may not use this file except in compliance
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* with the License. You may obtain a copy of the License at
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*
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* http://www.apache.org/licenses/LICENSE-2.0
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*
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* Unless required by applicable law or agreed to in writing,
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* software distributed under the License is distributed on an
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* "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
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* KIND, either express or implied. See the License for the
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* specific language governing permissions and limitations
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* under the License.
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*/
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#ifndef THETA_SKETCH_EXPERIMENTAL_HPP_
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#define THETA_SKETCH_EXPERIMENTAL_HPP_
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#include "theta_update_sketch_base.hpp"
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namespace datasketches {
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// experimental theta sketch derived from the same base as tuple sketch
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template<typename Allocator = std::allocator<uint64_t>>
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class theta_sketch_experimental {
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public:
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using Entry = uint64_t;
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using ExtractKey = trivial_extract_key;
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using iterator = theta_iterator<Entry, ExtractKey>;
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using const_iterator = theta_const_iterator<Entry, ExtractKey>;
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virtual ~theta_sketch_experimental() = default;
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/**
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* @return allocator
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*/
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virtual Allocator get_allocator() const = 0;
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/**
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* @return true if this sketch represents an empty set (not the same as no retained entries!)
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*/
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virtual bool is_empty() const = 0;
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/**
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* @return estimate of the distinct count of the input stream
|
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+
*/
|
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+
double get_estimate() const;
|
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+
|
54
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+
/**
|
55
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* Returns the approximate lower error bound given a number of standard deviations.
|
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+
* This parameter is similar to the number of standard deviations of the normal distribution
|
57
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+
* and corresponds to approximately 67%, 95% and 99% confidence intervals.
|
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* @param num_std_devs number of Standard Deviations (1, 2 or 3)
|
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+
* @return the lower bound
|
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+
*/
|
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+
double get_lower_bound(uint8_t num_std_devs) const;
|
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+
|
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+
/**
|
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+
* Returns the approximate upper error bound given a number of standard deviations.
|
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+
* This parameter is similar to the number of standard deviations of the normal distribution
|
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+
* and corresponds to approximately 67%, 95% and 99% confidence intervals.
|
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+
* @param num_std_devs number of Standard Deviations (1, 2 or 3)
|
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+
* @return the upper bound
|
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+
*/
|
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+
double get_upper_bound(uint8_t num_std_devs) const;
|
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+
|
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|
+
/**
|
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+
* @return true if the sketch is in estimation mode (as opposed to exact mode)
|
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+
*/
|
75
|
+
bool is_estimation_mode() const;
|
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+
|
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+
/**
|
78
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+
* @return theta as a fraction from 0 to 1 (effective sampling rate)
|
79
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+
*/
|
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|
+
double get_theta() const;
|
81
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+
|
82
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+
/**
|
83
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+
* @return theta as a positive integer between 0 and LLONG_MAX
|
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+
*/
|
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+
virtual uint64_t get_theta64() const = 0;
|
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+
|
87
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+
/**
|
88
|
+
* @return the number of retained entries in the sketch
|
89
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+
*/
|
90
|
+
virtual uint32_t get_num_retained() const = 0;
|
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+
|
92
|
+
/**
|
93
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+
* @return hash of the seed that was used to hash the input
|
94
|
+
*/
|
95
|
+
virtual uint16_t get_seed_hash() const = 0;
|
96
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+
|
97
|
+
/**
|
98
|
+
* @return true if retained entries are ordered
|
99
|
+
*/
|
100
|
+
virtual bool is_ordered() const = 0;
|
101
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+
|
102
|
+
/**
|
103
|
+
* Provides a human-readable summary of this sketch as a string
|
104
|
+
* @param print_items if true include the list of items retained by the sketch
|
105
|
+
* @return sketch summary as a string
|
106
|
+
*/
|
107
|
+
virtual string<Allocator> to_string(bool print_items = false) const;
|
108
|
+
|
109
|
+
/**
|
110
|
+
* Iterator over hash values in this sketch.
|
111
|
+
* @return begin iterator
|
112
|
+
*/
|
113
|
+
virtual iterator begin() = 0;
|
114
|
+
|
115
|
+
/**
|
116
|
+
* Iterator pointing past the valid range.
|
117
|
+
* Not to be incremented or dereferenced.
|
118
|
+
* @return end iterator
|
119
|
+
*/
|
120
|
+
virtual iterator end() = 0;
|
121
|
+
|
122
|
+
/**
|
123
|
+
* Const iterator over hash values in this sketch.
|
124
|
+
* @return begin iterator
|
125
|
+
*/
|
126
|
+
virtual const_iterator begin() const = 0;
|
127
|
+
|
128
|
+
/**
|
129
|
+
* Const iterator pointing past the valid range.
|
130
|
+
* Not to be incremented or dereferenced.
|
131
|
+
* @return end iterator
|
132
|
+
*/
|
133
|
+
virtual const_iterator end() const = 0;
|
134
|
+
|
135
|
+
protected:
|
136
|
+
virtual void print_specifics(std::ostringstream& os) const = 0;
|
137
|
+
};
|
138
|
+
|
139
|
+
// forward declaration
|
140
|
+
template<typename A> class compact_theta_sketch_experimental;
|
141
|
+
|
142
|
+
template<typename Allocator = std::allocator<uint64_t>>
|
143
|
+
class update_theta_sketch_experimental: public theta_sketch_experimental<Allocator> {
|
144
|
+
public:
|
145
|
+
using Base = theta_sketch_experimental<Allocator>;
|
146
|
+
using Entry = typename Base::Entry;
|
147
|
+
using ExtractKey = typename Base::ExtractKey;
|
148
|
+
using iterator = typename Base::iterator;
|
149
|
+
using const_iterator = typename Base::const_iterator;
|
150
|
+
using theta_table = theta_update_sketch_base<Entry, ExtractKey, Allocator>;
|
151
|
+
using resize_factor = typename theta_table::resize_factor;
|
152
|
+
|
153
|
+
// No constructor here. Use builder instead.
|
154
|
+
class builder;
|
155
|
+
|
156
|
+
update_theta_sketch_experimental(const update_theta_sketch_experimental&) = default;
|
157
|
+
update_theta_sketch_experimental(update_theta_sketch_experimental&&) noexcept = default;
|
158
|
+
virtual ~update_theta_sketch_experimental() = default;
|
159
|
+
update_theta_sketch_experimental& operator=(const update_theta_sketch_experimental&) = default;
|
160
|
+
update_theta_sketch_experimental& operator=(update_theta_sketch_experimental&&) = default;
|
161
|
+
|
162
|
+
virtual Allocator get_allocator() const;
|
163
|
+
virtual bool is_empty() const;
|
164
|
+
virtual bool is_ordered() const;
|
165
|
+
virtual uint16_t get_seed_hash() const;
|
166
|
+
virtual uint64_t get_theta64() const;
|
167
|
+
virtual uint32_t get_num_retained() const;
|
168
|
+
|
169
|
+
/**
|
170
|
+
* @return configured nominal number of entries in the sketch
|
171
|
+
*/
|
172
|
+
uint8_t get_lg_k() const;
|
173
|
+
|
174
|
+
/**
|
175
|
+
* @return configured resize factor of the sketch
|
176
|
+
*/
|
177
|
+
resize_factor get_rf() const;
|
178
|
+
|
179
|
+
/**
|
180
|
+
* Update this sketch with a given string.
|
181
|
+
* @param value string to update the sketch with
|
182
|
+
*/
|
183
|
+
void update(const std::string& value);
|
184
|
+
|
185
|
+
/**
|
186
|
+
* Update this sketch with a given unsigned 64-bit integer.
|
187
|
+
* @param value uint64_t to update the sketch with
|
188
|
+
*/
|
189
|
+
void update(uint64_t value);
|
190
|
+
|
191
|
+
/**
|
192
|
+
* Update this sketch with a given signed 64-bit integer.
|
193
|
+
* @param value int64_t to update the sketch with
|
194
|
+
*/
|
195
|
+
void update(int64_t value);
|
196
|
+
|
197
|
+
/**
|
198
|
+
* Update this sketch with a given unsigned 32-bit integer.
|
199
|
+
* For compatibility with Java implementation.
|
200
|
+
* @param value uint32_t to update the sketch with
|
201
|
+
*/
|
202
|
+
void update(uint32_t value);
|
203
|
+
|
204
|
+
/**
|
205
|
+
* Update this sketch with a given signed 32-bit integer.
|
206
|
+
* For compatibility with Java implementation.
|
207
|
+
* @param value int32_t to update the sketch with
|
208
|
+
*/
|
209
|
+
void update(int32_t value);
|
210
|
+
|
211
|
+
/**
|
212
|
+
* Update this sketch with a given unsigned 16-bit integer.
|
213
|
+
* For compatibility with Java implementation.
|
214
|
+
* @param value uint16_t to update the sketch with
|
215
|
+
*/
|
216
|
+
void update(uint16_t value);
|
217
|
+
|
218
|
+
/**
|
219
|
+
* Update this sketch with a given signed 16-bit integer.
|
220
|
+
* For compatibility with Java implementation.
|
221
|
+
* @param value int16_t to update the sketch with
|
222
|
+
*/
|
223
|
+
void update(int16_t value);
|
224
|
+
|
225
|
+
/**
|
226
|
+
* Update this sketch with a given unsigned 8-bit integer.
|
227
|
+
* For compatibility with Java implementation.
|
228
|
+
* @param value uint8_t to update the sketch with
|
229
|
+
*/
|
230
|
+
void update(uint8_t value);
|
231
|
+
|
232
|
+
/**
|
233
|
+
* Update this sketch with a given signed 8-bit integer.
|
234
|
+
* For compatibility with Java implementation.
|
235
|
+
* @param value int8_t to update the sketch with
|
236
|
+
*/
|
237
|
+
void update(int8_t value);
|
238
|
+
|
239
|
+
/**
|
240
|
+
* Update this sketch with a given double-precision floating point value.
|
241
|
+
* For compatibility with Java implementation.
|
242
|
+
* @param value double to update the sketch with
|
243
|
+
*/
|
244
|
+
void update(double value);
|
245
|
+
|
246
|
+
/**
|
247
|
+
* Update this sketch with a given floating point value.
|
248
|
+
* For compatibility with Java implementation.
|
249
|
+
* @param value float to update the sketch with
|
250
|
+
*/
|
251
|
+
void update(float value);
|
252
|
+
|
253
|
+
/**
|
254
|
+
* Update this sketch with given data of any type.
|
255
|
+
* This is a "universal" update that covers all cases above,
|
256
|
+
* but may produce different hashes.
|
257
|
+
* Be very careful to hash input values consistently using the same approach
|
258
|
+
* both over time and on different platforms
|
259
|
+
* and while passing sketches between C++ environment and Java environment.
|
260
|
+
* Otherwise two sketches that should represent overlapping sets will be disjoint
|
261
|
+
* For instance, for signed 32-bit values call update(int32_t) method above,
|
262
|
+
* which does widening conversion to int64_t, if compatibility with Java is expected
|
263
|
+
* @param data pointer to the data
|
264
|
+
* @param length of the data in bytes
|
265
|
+
*/
|
266
|
+
void update(const void* data, size_t length);
|
267
|
+
|
268
|
+
/**
|
269
|
+
* Remove retained entries in excess of the nominal size k (if any)
|
270
|
+
*/
|
271
|
+
void trim();
|
272
|
+
|
273
|
+
/**
|
274
|
+
* Converts this sketch to a compact sketch (ordered or unordered).
|
275
|
+
* @param ordered optional flag to specify if ordered sketch should be produced
|
276
|
+
* @return compact sketch
|
277
|
+
*/
|
278
|
+
compact_theta_sketch_experimental<Allocator> compact(bool ordered = true) const;
|
279
|
+
|
280
|
+
virtual iterator begin();
|
281
|
+
virtual iterator end();
|
282
|
+
virtual const_iterator begin() const;
|
283
|
+
virtual const_iterator end() const;
|
284
|
+
|
285
|
+
private:
|
286
|
+
theta_table table_;
|
287
|
+
|
288
|
+
// for builder
|
289
|
+
update_theta_sketch_experimental(uint8_t lg_cur_size, uint8_t lg_nom_size, resize_factor rf, uint64_t theta,
|
290
|
+
uint64_t seed, const Allocator& allocator);
|
291
|
+
|
292
|
+
virtual void print_specifics(std::ostringstream& os) const;
|
293
|
+
};
|
294
|
+
|
295
|
+
// compact sketch
|
296
|
+
|
297
|
+
template<typename Allocator = std::allocator<uint64_t>>
|
298
|
+
class compact_theta_sketch_experimental: public theta_sketch_experimental<Allocator> {
|
299
|
+
public:
|
300
|
+
using Base = theta_sketch_experimental<Allocator>;
|
301
|
+
using iterator = typename Base::iterator;
|
302
|
+
using const_iterator = typename Base::const_iterator;
|
303
|
+
using AllocBytes = typename std::allocator_traits<Allocator>::template rebind_alloc<uint8_t>;
|
304
|
+
using vector_bytes = std::vector<uint8_t, AllocBytes>;
|
305
|
+
|
306
|
+
static const uint8_t SERIAL_VERSION = 3;
|
307
|
+
static const uint8_t SKETCH_TYPE = 3;
|
308
|
+
|
309
|
+
// Instances of this type can be obtained:
|
310
|
+
// - by compacting an update_theta_sketch
|
311
|
+
// - as a result of a set operation
|
312
|
+
// - by deserializing a previously serialized compact sketch
|
313
|
+
|
314
|
+
compact_theta_sketch_experimental(const Base& other, bool ordered);
|
315
|
+
compact_theta_sketch_experimental(const compact_theta_sketch_experimental&) = default;
|
316
|
+
compact_theta_sketch_experimental(compact_theta_sketch_experimental&&) noexcept = default;
|
317
|
+
virtual ~compact_theta_sketch_experimental() = default;
|
318
|
+
compact_theta_sketch_experimental& operator=(const compact_theta_sketch_experimental&) = default;
|
319
|
+
compact_theta_sketch_experimental& operator=(compact_theta_sketch_experimental&&) = default;
|
320
|
+
|
321
|
+
virtual Allocator get_allocator() const;
|
322
|
+
virtual bool is_empty() const;
|
323
|
+
virtual bool is_ordered() const;
|
324
|
+
virtual uint64_t get_theta64() const;
|
325
|
+
virtual uint32_t get_num_retained() const;
|
326
|
+
virtual uint16_t get_seed_hash() const;
|
327
|
+
|
328
|
+
/**
|
329
|
+
* This method serializes the sketch into a given stream in a binary form
|
330
|
+
* @param os output stream
|
331
|
+
*/
|
332
|
+
void serialize(std::ostream& os) const;
|
333
|
+
|
334
|
+
/**
|
335
|
+
* This method serializes the sketch as a vector of bytes.
|
336
|
+
* An optional header can be reserved in front of the sketch.
|
337
|
+
* It is an uninitialized space of a given size.
|
338
|
+
* This header is used in Datasketches PostgreSQL extension.
|
339
|
+
* @param header_size_bytes space to reserve in front of the sketch
|
340
|
+
*/
|
341
|
+
vector_bytes serialize(unsigned header_size_bytes = 0) const;
|
342
|
+
|
343
|
+
virtual iterator begin();
|
344
|
+
virtual iterator end();
|
345
|
+
virtual const_iterator begin() const;
|
346
|
+
virtual const_iterator end() const;
|
347
|
+
|
348
|
+
/**
|
349
|
+
* This method deserializes a sketch from a given stream.
|
350
|
+
* @param is input stream
|
351
|
+
* @param seed the seed for the hash function that was used to create the sketch
|
352
|
+
* @return an instance of the sketch
|
353
|
+
*/
|
354
|
+
static compact_theta_sketch_experimental deserialize(std::istream& is,
|
355
|
+
uint64_t seed = DEFAULT_SEED, const Allocator& allocator = Allocator());
|
356
|
+
|
357
|
+
/**
|
358
|
+
* This method deserializes a sketch from a given array of bytes.
|
359
|
+
* @param bytes pointer to the array of bytes
|
360
|
+
* @param size the size of the array
|
361
|
+
* @param seed the seed for the hash function that was used to create the sketch
|
362
|
+
* @return an instance of the sketch
|
363
|
+
*/
|
364
|
+
static compact_theta_sketch_experimental deserialize(const void* bytes, size_t size,
|
365
|
+
uint64_t seed = DEFAULT_SEED, const Allocator& allocator = Allocator());
|
366
|
+
|
367
|
+
// for internal use
|
368
|
+
compact_theta_sketch_experimental(bool is_empty, bool is_ordered, uint16_t seed_hash, uint64_t theta, std::vector<uint64_t, Allocator>&& entries);
|
369
|
+
|
370
|
+
private:
|
371
|
+
enum flags { IS_BIG_ENDIAN, IS_READ_ONLY, IS_EMPTY, IS_COMPACT, IS_ORDERED };
|
372
|
+
|
373
|
+
bool is_empty_;
|
374
|
+
bool is_ordered_;
|
375
|
+
uint16_t seed_hash_;
|
376
|
+
uint64_t theta_;
|
377
|
+
std::vector<uint64_t, Allocator> entries_;
|
378
|
+
|
379
|
+
virtual void print_specifics(std::ostringstream& os) const;
|
380
|
+
};
|
381
|
+
|
382
|
+
template<typename Allocator>
|
383
|
+
class update_theta_sketch_experimental<Allocator>::builder: public theta_base_builder<builder, Allocator> {
|
384
|
+
public:
|
385
|
+
builder(const Allocator& allocator = Allocator());
|
386
|
+
update_theta_sketch_experimental build() const;
|
387
|
+
};
|
388
|
+
|
389
|
+
} /* namespace datasketches */
|
390
|
+
|
391
|
+
#include "theta_sketch_experimental_impl.hpp"
|
392
|
+
|
393
|
+
#endif
|
@@ -0,0 +1,481 @@
|
|
1
|
+
/*
|
2
|
+
* Licensed to the Apache Software Foundation (ASF) under one
|
3
|
+
* or more contributor license agreements. See the NOTICE file
|
4
|
+
* distributed with this work for additional information
|
5
|
+
* regarding copyright ownership. The ASF licenses this file
|
6
|
+
* to you under the Apache License, Version 2.0 (the
|
7
|
+
* "License"); you may not use this file except in compliance
|
8
|
+
* with the License. You may obtain a copy of the License at
|
9
|
+
*
|
10
|
+
* http://www.apache.org/licenses/LICENSE-2.0
|
11
|
+
*
|
12
|
+
* Unless required by applicable law or agreed to in writing,
|
13
|
+
* software distributed under the License is distributed on an
|
14
|
+
* "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
|
15
|
+
* KIND, either express or implied. See the License for the
|
16
|
+
* specific language governing permissions and limitations
|
17
|
+
* under the License.
|
18
|
+
*/
|
19
|
+
|
20
|
+
#include <sstream>
|
21
|
+
|
22
|
+
#include "serde.hpp"
|
23
|
+
#include "binomial_bounds.hpp"
|
24
|
+
#include "theta_helpers.hpp"
|
25
|
+
|
26
|
+
namespace datasketches {
|
27
|
+
|
28
|
+
template<typename A>
|
29
|
+
bool theta_sketch_experimental<A>::is_estimation_mode() const {
|
30
|
+
return get_theta64() < theta_constants::MAX_THETA && !is_empty();
|
31
|
+
}
|
32
|
+
|
33
|
+
template<typename A>
|
34
|
+
double theta_sketch_experimental<A>::get_theta() const {
|
35
|
+
return static_cast<double>(get_theta64()) / theta_constants::MAX_THETA;
|
36
|
+
}
|
37
|
+
|
38
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+
template<typename A>
|
39
|
+
double theta_sketch_experimental<A>::get_estimate() const {
|
40
|
+
return get_num_retained() / get_theta();
|
41
|
+
}
|
42
|
+
|
43
|
+
template<typename A>
|
44
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+
double theta_sketch_experimental<A>::get_lower_bound(uint8_t num_std_devs) const {
|
45
|
+
if (!is_estimation_mode()) return get_num_retained();
|
46
|
+
return binomial_bounds::get_lower_bound(get_num_retained(), get_theta(), num_std_devs);
|
47
|
+
}
|
48
|
+
|
49
|
+
template<typename A>
|
50
|
+
double theta_sketch_experimental<A>::get_upper_bound(uint8_t num_std_devs) const {
|
51
|
+
if (!is_estimation_mode()) return get_num_retained();
|
52
|
+
return binomial_bounds::get_upper_bound(get_num_retained(), get_theta(), num_std_devs);
|
53
|
+
}
|
54
|
+
|
55
|
+
template<typename A>
|
56
|
+
string<A> theta_sketch_experimental<A>::to_string(bool detail) const {
|
57
|
+
std::basic_ostringstream<char, std::char_traits<char>, AllocChar<A>> os;
|
58
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+
os << "### Theta sketch summary:" << std::endl;
|
59
|
+
os << " num retained entries : " << get_num_retained() << std::endl;
|
60
|
+
os << " seed hash : " << get_seed_hash() << std::endl;
|
61
|
+
os << " empty? : " << (is_empty() ? "true" : "false") << std::endl;
|
62
|
+
os << " ordered? : " << (is_ordered() ? "true" : "false") << std::endl;
|
63
|
+
os << " estimation mode? : " << (is_estimation_mode() ? "true" : "false") << std::endl;
|
64
|
+
os << " theta (fraction) : " << get_theta() << std::endl;
|
65
|
+
os << " theta (raw 64-bit) : " << get_theta64() << std::endl;
|
66
|
+
os << " estimate : " << this->get_estimate() << std::endl;
|
67
|
+
os << " lower bound 95% conf : " << this->get_lower_bound(2) << std::endl;
|
68
|
+
os << " upper bound 95% conf : " << this->get_upper_bound(2) << std::endl;
|
69
|
+
print_specifics(os);
|
70
|
+
os << "### End sketch summary" << std::endl;
|
71
|
+
if (detail) {
|
72
|
+
os << "### Retained entries" << std::endl;
|
73
|
+
for (const auto& hash: *this) {
|
74
|
+
os << hash << std::endl;
|
75
|
+
}
|
76
|
+
os << "### End retained entries" << std::endl;
|
77
|
+
}
|
78
|
+
return os.str();
|
79
|
+
}
|
80
|
+
|
81
|
+
// update sketch
|
82
|
+
|
83
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+
template<typename A>
|
84
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+
update_theta_sketch_experimental<A>::update_theta_sketch_experimental(uint8_t lg_cur_size, uint8_t lg_nom_size, resize_factor rf,
|
85
|
+
uint64_t theta, uint64_t seed, const A& allocator):
|
86
|
+
table_(lg_cur_size, lg_nom_size, rf, theta, seed, allocator)
|
87
|
+
{}
|
88
|
+
|
89
|
+
template<typename A>
|
90
|
+
A update_theta_sketch_experimental<A>::get_allocator() const {
|
91
|
+
return table_.allocator_;
|
92
|
+
}
|
93
|
+
|
94
|
+
template<typename A>
|
95
|
+
bool update_theta_sketch_experimental<A>::is_empty() const {
|
96
|
+
return table_.is_empty_;
|
97
|
+
}
|
98
|
+
|
99
|
+
template<typename A>
|
100
|
+
bool update_theta_sketch_experimental<A>::is_ordered() const {
|
101
|
+
return false;
|
102
|
+
}
|
103
|
+
|
104
|
+
template<typename A>
|
105
|
+
uint64_t update_theta_sketch_experimental<A>::get_theta64() const {
|
106
|
+
return table_.theta_;
|
107
|
+
}
|
108
|
+
|
109
|
+
template<typename A>
|
110
|
+
uint32_t update_theta_sketch_experimental<A>::get_num_retained() const {
|
111
|
+
return table_.num_entries_;
|
112
|
+
}
|
113
|
+
|
114
|
+
template<typename A>
|
115
|
+
uint16_t update_theta_sketch_experimental<A>::get_seed_hash() const {
|
116
|
+
return compute_seed_hash(table_.seed_);
|
117
|
+
}
|
118
|
+
|
119
|
+
template<typename A>
|
120
|
+
uint8_t update_theta_sketch_experimental<A>::get_lg_k() const {
|
121
|
+
return table_.lg_nom_size_;
|
122
|
+
}
|
123
|
+
|
124
|
+
template<typename A>
|
125
|
+
auto update_theta_sketch_experimental<A>::get_rf() const -> resize_factor {
|
126
|
+
return table_.rf_;
|
127
|
+
}
|
128
|
+
|
129
|
+
template<typename A>
|
130
|
+
void update_theta_sketch_experimental<A>::update(uint64_t value) {
|
131
|
+
update(&value, sizeof(value));
|
132
|
+
}
|
133
|
+
|
134
|
+
template<typename A>
|
135
|
+
void update_theta_sketch_experimental<A>::update(int64_t value) {
|
136
|
+
update(&value, sizeof(value));
|
137
|
+
}
|
138
|
+
|
139
|
+
template<typename A>
|
140
|
+
void update_theta_sketch_experimental<A>::update(uint32_t value) {
|
141
|
+
update(static_cast<int32_t>(value));
|
142
|
+
}
|
143
|
+
|
144
|
+
template<typename A>
|
145
|
+
void update_theta_sketch_experimental<A>::update(int32_t value) {
|
146
|
+
update(static_cast<int64_t>(value));
|
147
|
+
}
|
148
|
+
|
149
|
+
template<typename A>
|
150
|
+
void update_theta_sketch_experimental<A>::update(uint16_t value) {
|
151
|
+
update(static_cast<int16_t>(value));
|
152
|
+
}
|
153
|
+
|
154
|
+
template<typename A>
|
155
|
+
void update_theta_sketch_experimental<A>::update(int16_t value) {
|
156
|
+
update(static_cast<int64_t>(value));
|
157
|
+
}
|
158
|
+
|
159
|
+
template<typename A>
|
160
|
+
void update_theta_sketch_experimental<A>::update(uint8_t value) {
|
161
|
+
update(static_cast<int8_t>(value));
|
162
|
+
}
|
163
|
+
|
164
|
+
template<typename A>
|
165
|
+
void update_theta_sketch_experimental<A>::update(int8_t value) {
|
166
|
+
update(static_cast<int64_t>(value));
|
167
|
+
}
|
168
|
+
|
169
|
+
template<typename A>
|
170
|
+
void update_theta_sketch_experimental<A>::update(double value) {
|
171
|
+
update(canonical_double(value));
|
172
|
+
}
|
173
|
+
|
174
|
+
template<typename A>
|
175
|
+
void update_theta_sketch_experimental<A>::update(float value) {
|
176
|
+
update(static_cast<double>(value));
|
177
|
+
}
|
178
|
+
|
179
|
+
template<typename A>
|
180
|
+
void update_theta_sketch_experimental<A>::update(const std::string& value) {
|
181
|
+
if (value.empty()) return;
|
182
|
+
update(value.c_str(), value.length());
|
183
|
+
}
|
184
|
+
|
185
|
+
template<typename A>
|
186
|
+
void update_theta_sketch_experimental<A>::update(const void* data, size_t length) {
|
187
|
+
const uint64_t hash = table_.hash_and_screen(data, length);
|
188
|
+
if (hash == 0) return;
|
189
|
+
auto result = table_.find(hash);
|
190
|
+
if (!result.second) {
|
191
|
+
table_.insert(result.first, hash);
|
192
|
+
}
|
193
|
+
}
|
194
|
+
|
195
|
+
template<typename A>
|
196
|
+
void update_theta_sketch_experimental<A>::trim() {
|
197
|
+
table_.trim();
|
198
|
+
}
|
199
|
+
|
200
|
+
template<typename A>
|
201
|
+
auto update_theta_sketch_experimental<A>::begin() -> iterator {
|
202
|
+
return iterator(table_.entries_, 1 << table_.lg_cur_size_, 0);
|
203
|
+
}
|
204
|
+
|
205
|
+
template<typename A>
|
206
|
+
auto update_theta_sketch_experimental<A>::end() -> iterator {
|
207
|
+
return iterator(nullptr, 0, 1 << table_.lg_cur_size_);
|
208
|
+
}
|
209
|
+
|
210
|
+
template<typename A>
|
211
|
+
auto update_theta_sketch_experimental<A>::begin() const -> const_iterator {
|
212
|
+
return const_iterator(table_.entries_, 1 << table_.lg_cur_size_, 0);
|
213
|
+
}
|
214
|
+
|
215
|
+
template<typename A>
|
216
|
+
auto update_theta_sketch_experimental<A>::end() const -> const_iterator {
|
217
|
+
return const_iterator(nullptr, 0, 1 << table_.lg_cur_size_);
|
218
|
+
}
|
219
|
+
template<typename A>
|
220
|
+
compact_theta_sketch_experimental<A> update_theta_sketch_experimental<A>::compact(bool ordered) const {
|
221
|
+
return compact_theta_sketch_experimental<A>(*this, ordered);
|
222
|
+
}
|
223
|
+
|
224
|
+
template<typename A>
|
225
|
+
void update_theta_sketch_experimental<A>::print_specifics(std::ostringstream& os) const {
|
226
|
+
os << " lg nominal size : " << static_cast<int>(table_.lg_nom_size_) << std::endl;
|
227
|
+
os << " lg current size : " << static_cast<int>(table_.lg_cur_size_) << std::endl;
|
228
|
+
os << " resize factor : " << (1 << table_.rf_) << std::endl;
|
229
|
+
}
|
230
|
+
|
231
|
+
// builder
|
232
|
+
|
233
|
+
template<typename A>
|
234
|
+
update_theta_sketch_experimental<A>::builder::builder(const A& allocator): theta_base_builder<builder, A>(allocator) {}
|
235
|
+
|
236
|
+
template<typename A>
|
237
|
+
update_theta_sketch_experimental<A> update_theta_sketch_experimental<A>::builder::build() const {
|
238
|
+
return update_theta_sketch_experimental(this->starting_lg_size(), this->lg_k_, this->rf_, this->starting_theta(), this->seed_, this->allocator_);
|
239
|
+
}
|
240
|
+
|
241
|
+
// experimental compact theta sketch
|
242
|
+
|
243
|
+
template<typename A>
|
244
|
+
compact_theta_sketch_experimental<A>::compact_theta_sketch_experimental(const Base& other, bool ordered):
|
245
|
+
is_empty_(other.is_empty()),
|
246
|
+
is_ordered_(other.is_ordered() || ordered),
|
247
|
+
seed_hash_(other.get_seed_hash()),
|
248
|
+
theta_(other.get_theta64()),
|
249
|
+
entries_(other.get_allocator())
|
250
|
+
{
|
251
|
+
entries_.reserve(other.get_num_retained());
|
252
|
+
std::copy(other.begin(), other.end(), std::back_inserter(entries_));
|
253
|
+
if (ordered && !other.is_ordered()) std::sort(entries_.begin(), entries_.end());
|
254
|
+
}
|
255
|
+
|
256
|
+
template<typename A>
|
257
|
+
compact_theta_sketch_experimental<A>::compact_theta_sketch_experimental(bool is_empty, bool is_ordered, uint16_t seed_hash, uint64_t theta,
|
258
|
+
std::vector<uint64_t, A>&& entries):
|
259
|
+
is_empty_(is_empty),
|
260
|
+
is_ordered_(is_ordered),
|
261
|
+
seed_hash_(seed_hash),
|
262
|
+
theta_(theta),
|
263
|
+
entries_(std::move(entries))
|
264
|
+
{}
|
265
|
+
|
266
|
+
template<typename A>
|
267
|
+
A compact_theta_sketch_experimental<A>::get_allocator() const {
|
268
|
+
return entries_.get_allocator();
|
269
|
+
}
|
270
|
+
|
271
|
+
template<typename A>
|
272
|
+
bool compact_theta_sketch_experimental<A>::is_empty() const {
|
273
|
+
return is_empty_;
|
274
|
+
}
|
275
|
+
|
276
|
+
template<typename A>
|
277
|
+
bool compact_theta_sketch_experimental<A>::is_ordered() const {
|
278
|
+
return is_ordered_;
|
279
|
+
}
|
280
|
+
|
281
|
+
template<typename A>
|
282
|
+
uint64_t compact_theta_sketch_experimental<A>::get_theta64() const {
|
283
|
+
return theta_;
|
284
|
+
}
|
285
|
+
|
286
|
+
template<typename A>
|
287
|
+
uint32_t compact_theta_sketch_experimental<A>::get_num_retained() const {
|
288
|
+
return entries_.size();
|
289
|
+
}
|
290
|
+
|
291
|
+
template<typename A>
|
292
|
+
uint16_t compact_theta_sketch_experimental<A>::get_seed_hash() const {
|
293
|
+
return seed_hash_;
|
294
|
+
}
|
295
|
+
|
296
|
+
template<typename A>
|
297
|
+
auto compact_theta_sketch_experimental<A>::begin() -> iterator {
|
298
|
+
return iterator(entries_.data(), entries_.size(), 0);
|
299
|
+
}
|
300
|
+
|
301
|
+
template<typename A>
|
302
|
+
auto compact_theta_sketch_experimental<A>::end() -> iterator {
|
303
|
+
return iterator(nullptr, 0, entries_.size());
|
304
|
+
}
|
305
|
+
|
306
|
+
template<typename A>
|
307
|
+
auto compact_theta_sketch_experimental<A>::begin() const -> const_iterator {
|
308
|
+
return const_iterator(entries_.data(), entries_.size(), 0);
|
309
|
+
}
|
310
|
+
|
311
|
+
template<typename A>
|
312
|
+
auto compact_theta_sketch_experimental<A>::end() const -> const_iterator {
|
313
|
+
return const_iterator(nullptr, 0, entries_.size());
|
314
|
+
}
|
315
|
+
|
316
|
+
template<typename A>
|
317
|
+
void compact_theta_sketch_experimental<A>::print_specifics(std::ostringstream&) const {}
|
318
|
+
|
319
|
+
template<typename A>
|
320
|
+
void compact_theta_sketch_experimental<A>::serialize(std::ostream& os) const {
|
321
|
+
const bool is_single_item = entries_.size() == 1 && !this->is_estimation_mode();
|
322
|
+
const uint8_t preamble_longs = this->is_empty() || is_single_item ? 1 : this->is_estimation_mode() ? 3 : 2;
|
323
|
+
os.write(reinterpret_cast<const char*>(&preamble_longs), sizeof(preamble_longs));
|
324
|
+
const uint8_t serial_version = SERIAL_VERSION;
|
325
|
+
os.write(reinterpret_cast<const char*>(&serial_version), sizeof(serial_version));
|
326
|
+
const uint8_t type = SKETCH_TYPE;
|
327
|
+
os.write(reinterpret_cast<const char*>(&type), sizeof(type));
|
328
|
+
const uint16_t unused16 = 0;
|
329
|
+
os.write(reinterpret_cast<const char*>(&unused16), sizeof(unused16));
|
330
|
+
const uint8_t flags_byte(
|
331
|
+
(1 << flags::IS_COMPACT) |
|
332
|
+
(1 << flags::IS_READ_ONLY) |
|
333
|
+
(this->is_empty() ? 1 << flags::IS_EMPTY : 0) |
|
334
|
+
(this->is_ordered() ? 1 << flags::IS_ORDERED : 0)
|
335
|
+
);
|
336
|
+
os.write(reinterpret_cast<const char*>(&flags_byte), sizeof(flags_byte));
|
337
|
+
const uint16_t seed_hash = get_seed_hash();
|
338
|
+
os.write(reinterpret_cast<const char*>(&seed_hash), sizeof(seed_hash));
|
339
|
+
if (!this->is_empty()) {
|
340
|
+
if (!is_single_item) {
|
341
|
+
const uint32_t num_entries = entries_.size();
|
342
|
+
os.write(reinterpret_cast<const char*>(&num_entries), sizeof(num_entries));
|
343
|
+
const uint32_t unused32 = 0;
|
344
|
+
os.write(reinterpret_cast<const char*>(&unused32), sizeof(unused32));
|
345
|
+
if (this->is_estimation_mode()) {
|
346
|
+
os.write(reinterpret_cast<const char*>(&(this->theta_)), sizeof(uint64_t));
|
347
|
+
}
|
348
|
+
}
|
349
|
+
os.write(reinterpret_cast<const char*>(entries_.data()), entries_.size() * sizeof(uint64_t));
|
350
|
+
}
|
351
|
+
}
|
352
|
+
|
353
|
+
template<typename A>
|
354
|
+
auto compact_theta_sketch_experimental<A>::serialize(unsigned header_size_bytes) const -> vector_bytes {
|
355
|
+
const bool is_single_item = entries_.size() == 1 && !this->is_estimation_mode();
|
356
|
+
const uint8_t preamble_longs = this->is_empty() || is_single_item ? 1 : this->is_estimation_mode() ? 3 : 2;
|
357
|
+
const size_t size = header_size_bytes + sizeof(uint64_t) * preamble_longs
|
358
|
+
+ sizeof(uint64_t) * entries_.size();
|
359
|
+
vector_bytes bytes(size, 0, entries_.get_allocator());
|
360
|
+
uint8_t* ptr = bytes.data() + header_size_bytes;
|
361
|
+
|
362
|
+
ptr += copy_to_mem(&preamble_longs, ptr, sizeof(preamble_longs));
|
363
|
+
const uint8_t serial_version = SERIAL_VERSION;
|
364
|
+
ptr += copy_to_mem(&serial_version, ptr, sizeof(serial_version));
|
365
|
+
const uint8_t type = SKETCH_TYPE;
|
366
|
+
ptr += copy_to_mem(&type, ptr, sizeof(type));
|
367
|
+
const uint16_t unused16 = 0;
|
368
|
+
ptr += copy_to_mem(&unused16, ptr, sizeof(unused16));
|
369
|
+
const uint8_t flags_byte(
|
370
|
+
(1 << flags::IS_COMPACT) |
|
371
|
+
(1 << flags::IS_READ_ONLY) |
|
372
|
+
(this->is_empty() ? 1 << flags::IS_EMPTY : 0) |
|
373
|
+
(this->is_ordered() ? 1 << flags::IS_ORDERED : 0)
|
374
|
+
);
|
375
|
+
ptr += copy_to_mem(&flags_byte, ptr, sizeof(flags_byte));
|
376
|
+
const uint16_t seed_hash = get_seed_hash();
|
377
|
+
ptr += copy_to_mem(&seed_hash, ptr, sizeof(seed_hash));
|
378
|
+
if (!this->is_empty()) {
|
379
|
+
if (!is_single_item) {
|
380
|
+
const uint32_t num_entries = entries_.size();
|
381
|
+
ptr += copy_to_mem(&num_entries, ptr, sizeof(num_entries));
|
382
|
+
const uint32_t unused32 = 0;
|
383
|
+
ptr += copy_to_mem(&unused32, ptr, sizeof(unused32));
|
384
|
+
if (this->is_estimation_mode()) {
|
385
|
+
ptr += copy_to_mem(&theta_, ptr, sizeof(uint64_t));
|
386
|
+
}
|
387
|
+
}
|
388
|
+
ptr += copy_to_mem(entries_.data(), ptr, entries_.size() * sizeof(uint64_t));
|
389
|
+
}
|
390
|
+
return bytes;
|
391
|
+
}
|
392
|
+
|
393
|
+
template<typename A>
|
394
|
+
compact_theta_sketch_experimental<A> compact_theta_sketch_experimental<A>::deserialize(std::istream& is, uint64_t seed, const A& allocator) {
|
395
|
+
uint8_t preamble_longs;
|
396
|
+
is.read(reinterpret_cast<char*>(&preamble_longs), sizeof(preamble_longs));
|
397
|
+
uint8_t serial_version;
|
398
|
+
is.read(reinterpret_cast<char*>(&serial_version), sizeof(serial_version));
|
399
|
+
uint8_t type;
|
400
|
+
is.read(reinterpret_cast<char*>(&type), sizeof(type));
|
401
|
+
uint16_t unused16;
|
402
|
+
is.read(reinterpret_cast<char*>(&unused16), sizeof(unused16));
|
403
|
+
uint8_t flags_byte;
|
404
|
+
is.read(reinterpret_cast<char*>(&flags_byte), sizeof(flags_byte));
|
405
|
+
uint16_t seed_hash;
|
406
|
+
is.read(reinterpret_cast<char*>(&seed_hash), sizeof(seed_hash));
|
407
|
+
checker<true>::check_sketch_type(type, SKETCH_TYPE);
|
408
|
+
checker<true>::check_serial_version(serial_version, SERIAL_VERSION);
|
409
|
+
const bool is_empty = flags_byte & (1 << flags::IS_EMPTY);
|
410
|
+
if (!is_empty) checker<true>::check_seed_hash(seed_hash, compute_seed_hash(seed));
|
411
|
+
|
412
|
+
uint64_t theta = theta_constants::MAX_THETA;
|
413
|
+
uint32_t num_entries = 0;
|
414
|
+
if (!is_empty) {
|
415
|
+
if (preamble_longs == 1) {
|
416
|
+
num_entries = 1;
|
417
|
+
} else {
|
418
|
+
is.read(reinterpret_cast<char*>(&num_entries), sizeof(num_entries));
|
419
|
+
uint32_t unused32;
|
420
|
+
is.read(reinterpret_cast<char*>(&unused32), sizeof(unused32));
|
421
|
+
if (preamble_longs > 2) {
|
422
|
+
is.read(reinterpret_cast<char*>(&theta), sizeof(theta));
|
423
|
+
}
|
424
|
+
}
|
425
|
+
}
|
426
|
+
std::vector<uint64_t, A> entries(num_entries, 0, allocator);
|
427
|
+
if (!is_empty) is.read(reinterpret_cast<char*>(entries.data()), sizeof(uint64_t) * entries.size());
|
428
|
+
|
429
|
+
const bool is_ordered = flags_byte & (1 << flags::IS_ORDERED);
|
430
|
+
if (!is.good()) throw std::runtime_error("error reading from std::istream");
|
431
|
+
return compact_theta_sketch_experimental(is_empty, is_ordered, seed_hash, theta, std::move(entries));
|
432
|
+
}
|
433
|
+
|
434
|
+
template<typename A>
|
435
|
+
compact_theta_sketch_experimental<A> compact_theta_sketch_experimental<A>::deserialize(const void* bytes, size_t size, uint64_t seed, const A& allocator) {
|
436
|
+
ensure_minimum_memory(size, 8);
|
437
|
+
const char* ptr = static_cast<const char*>(bytes);
|
438
|
+
const char* base = ptr;
|
439
|
+
uint8_t preamble_longs;
|
440
|
+
ptr += copy_from_mem(ptr, &preamble_longs, sizeof(preamble_longs));
|
441
|
+
uint8_t serial_version;
|
442
|
+
ptr += copy_from_mem(ptr, &serial_version, sizeof(serial_version));
|
443
|
+
uint8_t type;
|
444
|
+
ptr += copy_from_mem(ptr, &type, sizeof(type));
|
445
|
+
uint16_t unused16;
|
446
|
+
ptr += copy_from_mem(ptr, &unused16, sizeof(unused16));
|
447
|
+
uint8_t flags_byte;
|
448
|
+
ptr += copy_from_mem(ptr, &flags_byte, sizeof(flags_byte));
|
449
|
+
uint16_t seed_hash;
|
450
|
+
ptr += copy_from_mem(ptr, &seed_hash, sizeof(seed_hash));
|
451
|
+
checker<true>::check_sketch_type(type, SKETCH_TYPE);
|
452
|
+
checker<true>::check_serial_version(serial_version, SERIAL_VERSION);
|
453
|
+
const bool is_empty = flags_byte & (1 << flags::IS_EMPTY);
|
454
|
+
if (!is_empty) checker<true>::check_seed_hash(seed_hash, compute_seed_hash(seed));
|
455
|
+
|
456
|
+
uint64_t theta = theta_constants::MAX_THETA;
|
457
|
+
uint32_t num_entries = 0;
|
458
|
+
if (!is_empty) {
|
459
|
+
if (preamble_longs == 1) {
|
460
|
+
num_entries = 1;
|
461
|
+
} else {
|
462
|
+
ensure_minimum_memory(size, 8); // read the first prelong before this method
|
463
|
+
ptr += copy_from_mem(ptr, &num_entries, sizeof(num_entries));
|
464
|
+
uint32_t unused32;
|
465
|
+
ptr += copy_from_mem(ptr, &unused32, sizeof(unused32));
|
466
|
+
if (preamble_longs > 2) {
|
467
|
+
ensure_minimum_memory(size, (preamble_longs - 1) << 3);
|
468
|
+
ptr += copy_from_mem(ptr, &theta, sizeof(theta));
|
469
|
+
}
|
470
|
+
}
|
471
|
+
}
|
472
|
+
const size_t entries_size_bytes = sizeof(uint64_t) * num_entries;
|
473
|
+
check_memory_size(ptr - base + entries_size_bytes, size);
|
474
|
+
std::vector<uint64_t, A> entries(num_entries, 0, allocator);
|
475
|
+
if (!is_empty) ptr += copy_from_mem(ptr, entries.data(), entries_size_bytes);
|
476
|
+
|
477
|
+
const bool is_ordered = flags_byte & (1 << flags::IS_ORDERED);
|
478
|
+
return compact_theta_sketch_experimental(is_empty, is_ordered, seed_hash, theta, std::move(entries));
|
479
|
+
}
|
480
|
+
|
481
|
+
} /* namespace datasketches */
|