datasketches 0.1.0

data/ext/datasketches/cpc_wrapper.cpp

@@ -0,0 +1,50 @@
+#include <sstream>
+
+#include <cpc_sketch.hpp>
+
+#include <rice/Constructor.hpp>
+#include <rice/Module.hpp>
+
+void init_cpc(Rice::Module& m) {
+  Rice::define_class_under<datasketches::cpc_sketch>(m, "CpcSketch")
+    .define_constructor(Rice::Constructor<datasketches::cpc_sketch, uint8_t>())
+    .define_method("lg_k", &datasketches::cpc_sketch::get_lg_k)
+    .define_method("empty?", &datasketches::cpc_sketch::is_empty)
+    .define_method("lower_bound", &datasketches::cpc_sketch::get_lower_bound)
+    .define_method("upper_bound", &datasketches::cpc_sketch::get_upper_bound)
+    .define_method(
+      "update",
+      *[](datasketches::cpc_sketch& self, Rice::Object datum) {
+        if (datum.is_a(rb_cInteger)) {
+          return self.update(from_ruby<int64_t>(datum));
+        } else if (datum.is_a(rb_cNumeric)) {
+          return self.update(from_ruby<double>(datum));
+        } else {
+          return self.update(datum.to_s().str());
+        }
+      })
+    .define_method(
+      "estimate",
+      *[](datasketches::cpc_sketch& self) {
+        return self.get_estimate();
+      })
+    .define_method(
+      "serialize",
+      *[](datasketches::cpc_sketch& self) {
+        std::ostringstream oss;
+        self.serialize(oss);
+        return oss.str();
+      })
+    // TODO change to summary?
+    .define_method(
+      "to_string",
+      *[](datasketches::cpc_sketch& self) {
+        return self.to_string();
+      })
+    .define_singleton_method(
+      "deserialize",
+      *[](std::string& is) {
+        std::istringstream iss(is);
+        return datasketches::cpc_sketch::deserialize(iss);
+      });
+}

data/ext/datasketches/ext.cpp

@@ -0,0 +1,12 @@
+#include <rice/Module.hpp>
+
+void init_cpc(Rice::Module& m);
+void init_hll(Rice::Module& m);
+
+extern "C"
+void Init_ext()
+{
+  Rice::Module m = Rice::define_module("DataSketches");
+  init_cpc(m);
+  init_hll(m);
+}

data/ext/datasketches/extconf.rb

@@ -0,0 +1,11 @@
+require "mkmf-rice"
+
+$CXXFLAGS += " -std=c++11"
+
+ext = File.expand_path(".", __dir__)
+datasketches = File.expand_path("../../vendor/datasketches-cpp", __dir__)
+
+$srcs = Dir["#{ext}/*.cpp"]
+$INCFLAGS += " -I#{datasketches}/common/include -I#{datasketches}/cpc/include -I#{datasketches}/hll/include"
+
+create_makefile("datasketches/ext")

data/ext/datasketches/hll_wrapper.cpp

@@ -0,0 +1,69 @@
+#include <sstream>
+
+#include <hll.hpp>
+
+#include <rice/Constructor.hpp>
+#include <rice/Module.hpp>
+
+void init_hll(Rice::Module& m) {
+  Rice::define_class_under<datasketches::hll_sketch>(m, "HllSketch")
+    .define_constructor(Rice::Constructor<datasketches::hll_sketch, int>())
+    .define_method("lg_config_k", &datasketches::hll_sketch::get_lg_config_k)
+    .define_method("compact?", &datasketches::hll_sketch::is_compact)
+    .define_method("empty?", &datasketches::hll_sketch::is_empty)
+    .define_method(
+      "update",
+      *[](datasketches::hll_sketch& self, Rice::Object datum) {
+        if (datum.is_a(rb_cInteger)) {
+          return self.update(from_ruby<int64_t>(datum));
+        } else if (datum.is_a(rb_cNumeric)) {
+          return self.update(from_ruby<double>(datum));
+        } else {
+          return self.update(datum.to_s().str());
+        }
+      })
+    .define_method(
+      "estimate",
+      *[](datasketches::hll_sketch& self) {
+        return self.get_estimate();
+      })
+    .define_method(
+      "serialize_compact",
+      *[](datasketches::hll_sketch& self) {
+        std::ostringstream oss;
+        self.serialize_compact(oss);
+        return oss.str();
+      })
+    .define_method(
+      "serialize_updatable",
+      *[](datasketches::hll_sketch& self) {
+        std::ostringstream oss;
+        self.serialize_updatable(oss);
+        return oss.str();
+      })
+    // TODO change to summary?
+    .define_method(
+      "to_string",
+      *[](datasketches::hll_sketch& self) {
+        return self.to_string();
+      })
+    .define_singleton_method(
+      "deserialize",
+      *[](std::string& is) {
+        std::istringstream iss(is);
+        return datasketches::hll_sketch::deserialize(iss);
+      });
+
+  define_class_under<datasketches::hll_union>(m, "HllUnion")
+    .define_constructor(Rice::Constructor<datasketches::hll_union, int>())
+    .define_method(
+      "update",
+      *[](datasketches::hll_union& self, datasketches::hll_sketch& datum) {
+        self.update(datum);
+      })
+    .define_method(
+      "estimate",
+      *[](datasketches::hll_union& self) {
+        return self.get_estimate();
+      });
+}

data/lib/datasketches.rb

@@ -0,0 +1,9 @@
+# ext
+require "datasketches/ext"
+
+# modules
+require "datasketches/version"
+
+module DataSketches
+  class Error < StandardError; end
+end

data/lib/datasketches/version.rb

@@ -0,0 +1,3 @@
+module DataSketches
+  VERSION = "0.1.0"
+end

data/vendor/datasketches-cpp/CMakeLists.txt

@@ -0,0 +1,126 @@
+# Licensed to the Apache Software Foundation (ASF) under one
+# or more contributor license agreements.  See the NOTICE file
+# distributed with this work for additional information
+# regarding copyright ownership.  The ASF licenses this file
+# to you under the Apache License, Version 2.0 (the
+# "License"); you may not use this file except in compliance
+# with the License.  You may obtain a copy of the License at
+#
+#   http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing,
+# software distributed under the License is distributed on an
+# "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
+# KIND, either express or implied.  See the License for the
+# specific language governing permissions and limitations
+# under the License.
+
+cmake_minimum_required(VERSION 3.12.0)
+project(DataSketches
+        VERSION 0.12.0
+        LANGUAGES CXX)
+
+include(GNUInstallDirs)
+include(CMakeDependentOption)
+
+### Require out-of-source builds
+file(TO_CMAKE_PATH "${PROJECT_BINARY_DIR}/CMakeLists.txt" LOC_PATH)
+if(EXISTS "${LOC_PATH}")
+    message(FATAL_ERROR "You cannot build in a source directory (or any directory with a CMakeLists.txt file). Please make a build subdirectory. Feel free to remove CMakeCache.txt and CMakeFiles.")
+endif()
+
+# Ensure builds on Windows export all symbols
+set(CMAKE_WINDOWS_EXPORT_ALL_SYMBOLS ON)
+
+#set(CMAKE_VERBOSE_MAKEFILE ON)
+set(CMAKE_MACOSX_RPATH ON)
+
+# enable compiler warnings globally
+# derived from https://foonathan.net/blog/2018/10/17/cmake-warnings.html
+# and https://arne-mertz.de/2018/07/cmake-properties-options/
+if (MSVC)
+  add_compile_options(/W4)
+  set(CMAKE_DEBUG_POSTFIX "d")
+else()
+  add_compile_options(-Wall -pedantic -W -Wextra)
+endif()
+
+if (CMAKE_CXX_COMPILER_ID STREQUAL "GNU" AND NOT CMAKE_CXX_COMPILER_VERSION VERSION_LESS "9.0")
+  add_compile_options(-Wimplicit-fallthrough=3)
+endif()
+
+# Code generation options, to ensure shaerd libraries work and are portable
+set(CMAKE_POSITION_INDEPENDENT_CODE ON)
+set(CMAKE_C_EXTENSIONS OFF)
+set(CMAKE_CXX_EXTENSIONS OFF)
+
+#list(APPEND CMAKE_MODULE_PATH ${CMAKE_CURRENT_SOURCE_DIR}/cmake)
+
+###### OPTIONS ######
+# Enable testing
+option(BUILD_TESTS "Build unit tests" ON)
+if (BUILD_TESTS)  
+  enable_testing()
+endif()
+
+option(COVERAGE "Enable code coverage reporting (g++/clang only)" OFF)
+if(COVERAGE AND CMAKE_CXX_COMPILER_ID MATCHES "GNU|Clang")
+  set(CMAKE_BUILD_TYPE "Debug" FORCE)
+  add_compile_options(--coverage -O0 -g3)
+  add_link_options(--coverage)
+endif()
+
+# set default build type to Release
+# Derived from: https://blog.kitware.com/cmake-and-the-default-build-type/
+set(default_build_type "Release")
+if(NOT CMAKE_BUILD_TYPE AND NOT CMAKE_CONFIGURATION_TYPES)
+  message(STATUS "Setting build type to '${default_build_type}' as none was specified.")
+  set(CMAKE_BUILD_TYPE "${default_build_type}" CACHE
+      STRING "Choose the type of build." FORCE)
+  # Set the possible values of build type for cmake-gui
+  set_property(CACHE CMAKE_BUILD_TYPE PROPERTY STRINGS
+    "Debug" "Release" "MinSizeRel" "RelWithDebInfo")
+endif()
+
+###### TARGETS ######
+# do we need the next line since we don't actually make a library anymore?
+add_library(datasketches INTERFACE)
+
+target_compile_features(datasketches INTERFACE cxx_std_11)
+
+add_subdirectory(common)
+add_subdirectory(hll)
+add_subdirectory(cpc)
+add_subdirectory(kll)
+add_subdirectory(fi)
+add_subdirectory(theta)
+add_subdirectory(sampling)
+add_subdirectory(tuple)
+
+if (WITH_PYTHON)
+  add_subdirectory(python)
+endif()
+
+target_link_libraries(datasketches INTERFACE hll cpc kll fi theta sampling)
+
+if (COVERAGE)
+  find_program(LCOV_PATH NAMES "lcov")
+  find_program(GENHTML_PATH NAMES "genhtml")
+  if (NOT LCOV_PATH-NOTFOUND AND NOT GENHTML_PATH-NOTFOUND)
+    add_custom_target(coverage_report
+      COMMAND ${LCOV_PATH} --capture --exclude '*/test/*' --exclude '/Library/*' --exclude '/usr/include/*' --directory . --output-file lcov.info
+      COMMAND ${GENHTML_PATH} --legend lcov.info --output-directory coverage --demangle-cpp)
+    endif()
+endif()
+
+
+# # Installation
+install(TARGETS datasketches
+  EXPORT ${PROJCT_NAME}
+  PUBLIC_HEADER DESTINATION ${CMAKE_INSTALL_INCLUDEDIR}/DataSketches
+  INCLUDES DESTINATION ${CMAKE_INSTALL_INCLUDEDIR}/DataSketches
+)
+
+#set(CPACK_PROJECT_NAME ${PROJECT_NAME})
+#set(CPACK_PROJECT_VERSION ${PROJECT_VERSION})
+#include(CPack)

data/vendor/datasketches-cpp/LICENSE

@@ -0,0 +1,311 @@
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+    
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+    SOFTWARE.
+    -------------------------------------------------------------
+    Code locations:
+      * https://github.com/apache/datasketches-cpp/blob/master/setup.py
+    that is adapted from the above.
+
+
+
+    =============================================================
+    Boost License  (https://www.boost.org/LICENSE_1_0.txt)
+    =============================================================
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+    ------------------------------------------------------------- 
+    Copyright (c) 2020 Two Blue Cubes Ltd. All rights reserved.
+
+    Boost Software License - Version 1.0 - August 17th, 2003
+    
+    Permission is hereby granted, free of charge, to any person or organization
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+
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+
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+    DEALINGS IN THE SOFTWARE.
+    -------------------------------------------------------------
+    Code Locations
+      * https://github.com/apache/datasketches-cpp/blob/master/common/test/catch.hpp
+    that is adapted from the above.
+
+
+
+    =============================================================
+    Public Domain
+    =============================================================
+    Original source code:
+       https://github.com/aappleby/smhasher/blob/master/src/MurmurHash3.cpp
+       Placed in the Public Domain by Austin Appleby
+    
+    Code Locations
+      common/include/MurmurHash3.h
+    that is adapted from the above.
+    -------------------------------------------------------------
+    Original source code:
+      * https://graphics.stanford.edu/~seander/bithacks.html
+      * Placed in the Public Domain by Sean Eron Anderson
+      
+    Code Locations
+      * common/include/ceiling_power_of_2.hpp
+    that is adapted from the above.
+