datasketches 0.1.0
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- checksums.yaml +7 -0
- data/CHANGELOG.md +3 -0
- data/LICENSE +310 -0
- data/NOTICE +11 -0
- data/README.md +126 -0
- data/ext/datasketches/cpc_wrapper.cpp +50 -0
- data/ext/datasketches/ext.cpp +12 -0
- data/ext/datasketches/extconf.rb +11 -0
- data/ext/datasketches/hll_wrapper.cpp +69 -0
- data/lib/datasketches.rb +9 -0
- data/lib/datasketches/version.rb +3 -0
- data/vendor/datasketches-cpp/CMakeLists.txt +126 -0
- data/vendor/datasketches-cpp/LICENSE +311 -0
- data/vendor/datasketches-cpp/MANIFEST.in +19 -0
- data/vendor/datasketches-cpp/NOTICE +11 -0
- data/vendor/datasketches-cpp/README.md +42 -0
- data/vendor/datasketches-cpp/common/CMakeLists.txt +45 -0
- data/vendor/datasketches-cpp/common/include/MurmurHash3.h +173 -0
- data/vendor/datasketches-cpp/common/include/binomial_bounds.hpp +458 -0
- data/vendor/datasketches-cpp/common/include/bounds_binomial_proportions.hpp +291 -0
- data/vendor/datasketches-cpp/common/include/ceiling_power_of_2.hpp +41 -0
- data/vendor/datasketches-cpp/common/include/common_defs.hpp +51 -0
- data/vendor/datasketches-cpp/common/include/conditional_back_inserter.hpp +68 -0
- data/vendor/datasketches-cpp/common/include/conditional_forward.hpp +70 -0
- data/vendor/datasketches-cpp/common/include/count_zeros.hpp +114 -0
- data/vendor/datasketches-cpp/common/include/inv_pow2_table.hpp +107 -0
- data/vendor/datasketches-cpp/common/include/memory_operations.hpp +57 -0
- data/vendor/datasketches-cpp/common/include/serde.hpp +196 -0
- data/vendor/datasketches-cpp/common/test/CMakeLists.txt +38 -0
- data/vendor/datasketches-cpp/common/test/catch.hpp +17618 -0
- data/vendor/datasketches-cpp/common/test/catch_runner.cpp +7 -0
- data/vendor/datasketches-cpp/common/test/test_allocator.cpp +31 -0
- data/vendor/datasketches-cpp/common/test/test_allocator.hpp +108 -0
- data/vendor/datasketches-cpp/common/test/test_runner.cpp +29 -0
- data/vendor/datasketches-cpp/common/test/test_type.hpp +137 -0
- data/vendor/datasketches-cpp/cpc/CMakeLists.txt +74 -0
- data/vendor/datasketches-cpp/cpc/include/compression_data.hpp +6022 -0
- data/vendor/datasketches-cpp/cpc/include/cpc_common.hpp +62 -0
- data/vendor/datasketches-cpp/cpc/include/cpc_compressor.hpp +147 -0
- data/vendor/datasketches-cpp/cpc/include/cpc_compressor_impl.hpp +742 -0
- data/vendor/datasketches-cpp/cpc/include/cpc_confidence.hpp +167 -0
- data/vendor/datasketches-cpp/cpc/include/cpc_sketch.hpp +311 -0
- data/vendor/datasketches-cpp/cpc/include/cpc_sketch_impl.hpp +810 -0
- data/vendor/datasketches-cpp/cpc/include/cpc_union.hpp +102 -0
- data/vendor/datasketches-cpp/cpc/include/cpc_union_impl.hpp +346 -0
- data/vendor/datasketches-cpp/cpc/include/cpc_util.hpp +137 -0
- data/vendor/datasketches-cpp/cpc/include/icon_estimator.hpp +274 -0
- data/vendor/datasketches-cpp/cpc/include/kxp_byte_lookup.hpp +81 -0
- data/vendor/datasketches-cpp/cpc/include/u32_table.hpp +84 -0
- data/vendor/datasketches-cpp/cpc/include/u32_table_impl.hpp +266 -0
- data/vendor/datasketches-cpp/cpc/test/CMakeLists.txt +44 -0
- data/vendor/datasketches-cpp/cpc/test/compression_test.cpp +67 -0
- data/vendor/datasketches-cpp/cpc/test/cpc_sketch_test.cpp +381 -0
- data/vendor/datasketches-cpp/cpc/test/cpc_union_test.cpp +149 -0
- data/vendor/datasketches-cpp/fi/CMakeLists.txt +54 -0
- data/vendor/datasketches-cpp/fi/include/frequent_items_sketch.hpp +319 -0
- data/vendor/datasketches-cpp/fi/include/frequent_items_sketch_impl.hpp +484 -0
- data/vendor/datasketches-cpp/fi/include/reverse_purge_hash_map.hpp +114 -0
- data/vendor/datasketches-cpp/fi/include/reverse_purge_hash_map_impl.hpp +345 -0
- data/vendor/datasketches-cpp/fi/test/CMakeLists.txt +44 -0
- data/vendor/datasketches-cpp/fi/test/frequent_items_sketch_custom_type_test.cpp +84 -0
- data/vendor/datasketches-cpp/fi/test/frequent_items_sketch_test.cpp +360 -0
- data/vendor/datasketches-cpp/fi/test/items_sketch_string_from_java.sk +0 -0
- data/vendor/datasketches-cpp/fi/test/items_sketch_string_utf8_from_java.sk +0 -0
- data/vendor/datasketches-cpp/fi/test/longs_sketch_from_java.sk +0 -0
- data/vendor/datasketches-cpp/fi/test/reverse_purge_hash_map_test.cpp +47 -0
- data/vendor/datasketches-cpp/hll/CMakeLists.txt +92 -0
- data/vendor/datasketches-cpp/hll/include/AuxHashMap-internal.hpp +303 -0
- data/vendor/datasketches-cpp/hll/include/AuxHashMap.hpp +83 -0
- data/vendor/datasketches-cpp/hll/include/CompositeInterpolationXTable-internal.hpp +811 -0
- data/vendor/datasketches-cpp/hll/include/CompositeInterpolationXTable.hpp +40 -0
- data/vendor/datasketches-cpp/hll/include/CouponHashSet-internal.hpp +291 -0
- data/vendor/datasketches-cpp/hll/include/CouponHashSet.hpp +59 -0
- data/vendor/datasketches-cpp/hll/include/CouponList-internal.hpp +417 -0
- data/vendor/datasketches-cpp/hll/include/CouponList.hpp +91 -0
- data/vendor/datasketches-cpp/hll/include/CubicInterpolation-internal.hpp +233 -0
- data/vendor/datasketches-cpp/hll/include/CubicInterpolation.hpp +43 -0
- data/vendor/datasketches-cpp/hll/include/HarmonicNumbers-internal.hpp +90 -0
- data/vendor/datasketches-cpp/hll/include/HarmonicNumbers.hpp +48 -0
- data/vendor/datasketches-cpp/hll/include/Hll4Array-internal.hpp +335 -0
- data/vendor/datasketches-cpp/hll/include/Hll4Array.hpp +69 -0
- data/vendor/datasketches-cpp/hll/include/Hll6Array-internal.hpp +124 -0
- data/vendor/datasketches-cpp/hll/include/Hll6Array.hpp +55 -0
- data/vendor/datasketches-cpp/hll/include/Hll8Array-internal.hpp +158 -0
- data/vendor/datasketches-cpp/hll/include/Hll8Array.hpp +56 -0
- data/vendor/datasketches-cpp/hll/include/HllArray-internal.hpp +706 -0
- data/vendor/datasketches-cpp/hll/include/HllArray.hpp +136 -0
- data/vendor/datasketches-cpp/hll/include/HllSketch-internal.hpp +462 -0
- data/vendor/datasketches-cpp/hll/include/HllSketchImpl-internal.hpp +149 -0
- data/vendor/datasketches-cpp/hll/include/HllSketchImpl.hpp +85 -0
- data/vendor/datasketches-cpp/hll/include/HllSketchImplFactory.hpp +170 -0
- data/vendor/datasketches-cpp/hll/include/HllUnion-internal.hpp +287 -0
- data/vendor/datasketches-cpp/hll/include/HllUtil.hpp +239 -0
- data/vendor/datasketches-cpp/hll/include/RelativeErrorTables-internal.hpp +112 -0
- data/vendor/datasketches-cpp/hll/include/RelativeErrorTables.hpp +46 -0
- data/vendor/datasketches-cpp/hll/include/coupon_iterator-internal.hpp +56 -0
- data/vendor/datasketches-cpp/hll/include/coupon_iterator.hpp +43 -0
- data/vendor/datasketches-cpp/hll/include/hll.hpp +669 -0
- data/vendor/datasketches-cpp/hll/include/hll.private.hpp +32 -0
- data/vendor/datasketches-cpp/hll/test/AuxHashMapTest.cpp +79 -0
- data/vendor/datasketches-cpp/hll/test/CMakeLists.txt +51 -0
- data/vendor/datasketches-cpp/hll/test/CouponHashSetTest.cpp +130 -0
- data/vendor/datasketches-cpp/hll/test/CouponListTest.cpp +181 -0
- data/vendor/datasketches-cpp/hll/test/CrossCountingTest.cpp +93 -0
- data/vendor/datasketches-cpp/hll/test/HllArrayTest.cpp +191 -0
- data/vendor/datasketches-cpp/hll/test/HllSketchTest.cpp +389 -0
- data/vendor/datasketches-cpp/hll/test/HllUnionTest.cpp +313 -0
- data/vendor/datasketches-cpp/hll/test/IsomorphicTest.cpp +141 -0
- data/vendor/datasketches-cpp/hll/test/TablesTest.cpp +44 -0
- data/vendor/datasketches-cpp/hll/test/ToFromByteArrayTest.cpp +168 -0
- data/vendor/datasketches-cpp/hll/test/array6_from_java.sk +0 -0
- data/vendor/datasketches-cpp/hll/test/compact_array4_from_java.sk +0 -0
- data/vendor/datasketches-cpp/hll/test/compact_set_from_java.sk +0 -0
- data/vendor/datasketches-cpp/hll/test/list_from_java.sk +0 -0
- data/vendor/datasketches-cpp/hll/test/updatable_array4_from_java.sk +0 -0
- data/vendor/datasketches-cpp/hll/test/updatable_set_from_java.sk +0 -0
- data/vendor/datasketches-cpp/kll/CMakeLists.txt +58 -0
- data/vendor/datasketches-cpp/kll/include/kll_helper.hpp +150 -0
- data/vendor/datasketches-cpp/kll/include/kll_helper_impl.hpp +319 -0
- data/vendor/datasketches-cpp/kll/include/kll_quantile_calculator.hpp +67 -0
- data/vendor/datasketches-cpp/kll/include/kll_quantile_calculator_impl.hpp +169 -0
- data/vendor/datasketches-cpp/kll/include/kll_sketch.hpp +559 -0
- data/vendor/datasketches-cpp/kll/include/kll_sketch_impl.hpp +1131 -0
- data/vendor/datasketches-cpp/kll/test/CMakeLists.txt +44 -0
- data/vendor/datasketches-cpp/kll/test/kll_sketch_custom_type_test.cpp +154 -0
- data/vendor/datasketches-cpp/kll/test/kll_sketch_float_one_item_v1.sk +0 -0
- data/vendor/datasketches-cpp/kll/test/kll_sketch_from_java.sk +0 -0
- data/vendor/datasketches-cpp/kll/test/kll_sketch_test.cpp +685 -0
- data/vendor/datasketches-cpp/kll/test/kll_sketch_validation.cpp +229 -0
- data/vendor/datasketches-cpp/pyproject.toml +17 -0
- data/vendor/datasketches-cpp/python/CMakeLists.txt +61 -0
- data/vendor/datasketches-cpp/python/README.md +78 -0
- data/vendor/datasketches-cpp/python/jupyter/CPCSketch.ipynb +345 -0
- data/vendor/datasketches-cpp/python/jupyter/FrequentItemsSketch.ipynb +354 -0
- data/vendor/datasketches-cpp/python/jupyter/HLLSketch.ipynb +346 -0
- data/vendor/datasketches-cpp/python/jupyter/KLLSketch.ipynb +463 -0
- data/vendor/datasketches-cpp/python/jupyter/ThetaSketchNotebook.ipynb +396 -0
- data/vendor/datasketches-cpp/python/src/__init__.py +2 -0
- data/vendor/datasketches-cpp/python/src/cpc_wrapper.cpp +90 -0
- data/vendor/datasketches-cpp/python/src/datasketches.cpp +40 -0
- data/vendor/datasketches-cpp/python/src/fi_wrapper.cpp +123 -0
- data/vendor/datasketches-cpp/python/src/hll_wrapper.cpp +136 -0
- data/vendor/datasketches-cpp/python/src/kll_wrapper.cpp +209 -0
- data/vendor/datasketches-cpp/python/src/theta_wrapper.cpp +162 -0
- data/vendor/datasketches-cpp/python/src/vector_of_kll.cpp +488 -0
- data/vendor/datasketches-cpp/python/src/vo_wrapper.cpp +140 -0
- data/vendor/datasketches-cpp/python/tests/__init__.py +0 -0
- data/vendor/datasketches-cpp/python/tests/cpc_test.py +64 -0
- data/vendor/datasketches-cpp/python/tests/fi_test.py +110 -0
- data/vendor/datasketches-cpp/python/tests/hll_test.py +131 -0
- data/vendor/datasketches-cpp/python/tests/kll_test.py +119 -0
- data/vendor/datasketches-cpp/python/tests/theta_test.py +121 -0
- data/vendor/datasketches-cpp/python/tests/vector_of_kll_test.py +148 -0
- data/vendor/datasketches-cpp/python/tests/vo_test.py +101 -0
- data/vendor/datasketches-cpp/sampling/CMakeLists.txt +48 -0
- data/vendor/datasketches-cpp/sampling/include/var_opt_sketch.hpp +392 -0
- data/vendor/datasketches-cpp/sampling/include/var_opt_sketch_impl.hpp +1752 -0
- data/vendor/datasketches-cpp/sampling/include/var_opt_union.hpp +239 -0
- data/vendor/datasketches-cpp/sampling/include/var_opt_union_impl.hpp +645 -0
- data/vendor/datasketches-cpp/sampling/test/CMakeLists.txt +43 -0
- data/vendor/datasketches-cpp/sampling/test/binaries_from_java.txt +67 -0
- data/vendor/datasketches-cpp/sampling/test/var_opt_sketch_test.cpp +509 -0
- data/vendor/datasketches-cpp/sampling/test/var_opt_union_test.cpp +358 -0
- data/vendor/datasketches-cpp/sampling/test/varopt_sketch_long_sampling.sk +0 -0
- data/vendor/datasketches-cpp/sampling/test/varopt_sketch_string_exact.sk +0 -0
- data/vendor/datasketches-cpp/sampling/test/varopt_union_double_sampling.sk +0 -0
- data/vendor/datasketches-cpp/setup.py +94 -0
- data/vendor/datasketches-cpp/theta/CMakeLists.txt +57 -0
- data/vendor/datasketches-cpp/theta/include/theta_a_not_b.hpp +73 -0
- data/vendor/datasketches-cpp/theta/include/theta_a_not_b_impl.hpp +83 -0
- data/vendor/datasketches-cpp/theta/include/theta_intersection.hpp +88 -0
- data/vendor/datasketches-cpp/theta/include/theta_intersection_impl.hpp +130 -0
- data/vendor/datasketches-cpp/theta/include/theta_sketch.hpp +533 -0
- data/vendor/datasketches-cpp/theta/include/theta_sketch_impl.hpp +939 -0
- data/vendor/datasketches-cpp/theta/include/theta_union.hpp +122 -0
- data/vendor/datasketches-cpp/theta/include/theta_union_impl.hpp +109 -0
- data/vendor/datasketches-cpp/theta/test/CMakeLists.txt +45 -0
- data/vendor/datasketches-cpp/theta/test/theta_a_not_b_test.cpp +244 -0
- data/vendor/datasketches-cpp/theta/test/theta_compact_empty_from_java.sk +0 -0
- data/vendor/datasketches-cpp/theta/test/theta_compact_estimation_from_java.sk +0 -0
- data/vendor/datasketches-cpp/theta/test/theta_compact_single_item_from_java.sk +0 -0
- data/vendor/datasketches-cpp/theta/test/theta_intersection_test.cpp +218 -0
- data/vendor/datasketches-cpp/theta/test/theta_sketch_test.cpp +438 -0
- data/vendor/datasketches-cpp/theta/test/theta_union_test.cpp +97 -0
- data/vendor/datasketches-cpp/theta/test/theta_update_empty_from_java.sk +0 -0
- data/vendor/datasketches-cpp/theta/test/theta_update_estimation_from_java.sk +0 -0
- data/vendor/datasketches-cpp/tuple/CMakeLists.txt +104 -0
- data/vendor/datasketches-cpp/tuple/include/array_of_doubles_a_not_b.hpp +52 -0
- data/vendor/datasketches-cpp/tuple/include/array_of_doubles_a_not_b_impl.hpp +32 -0
- data/vendor/datasketches-cpp/tuple/include/array_of_doubles_intersection.hpp +52 -0
- data/vendor/datasketches-cpp/tuple/include/array_of_doubles_intersection_impl.hpp +31 -0
- data/vendor/datasketches-cpp/tuple/include/array_of_doubles_sketch.hpp +179 -0
- data/vendor/datasketches-cpp/tuple/include/array_of_doubles_sketch_impl.hpp +238 -0
- data/vendor/datasketches-cpp/tuple/include/array_of_doubles_union.hpp +81 -0
- data/vendor/datasketches-cpp/tuple/include/array_of_doubles_union_impl.hpp +43 -0
- data/vendor/datasketches-cpp/tuple/include/bounds_on_ratios_in_sampled_sets.hpp +135 -0
- data/vendor/datasketches-cpp/tuple/include/bounds_on_ratios_in_theta_sketched_sets.hpp +135 -0
- data/vendor/datasketches-cpp/tuple/include/jaccard_similarity.hpp +172 -0
- data/vendor/datasketches-cpp/tuple/include/theta_a_not_b_experimental.hpp +53 -0
- data/vendor/datasketches-cpp/tuple/include/theta_a_not_b_experimental_impl.hpp +33 -0
- data/vendor/datasketches-cpp/tuple/include/theta_comparators.hpp +48 -0
- data/vendor/datasketches-cpp/tuple/include/theta_constants.hpp +34 -0
- data/vendor/datasketches-cpp/tuple/include/theta_helpers.hpp +54 -0
- data/vendor/datasketches-cpp/tuple/include/theta_intersection_base.hpp +59 -0
- data/vendor/datasketches-cpp/tuple/include/theta_intersection_base_impl.hpp +121 -0
- data/vendor/datasketches-cpp/tuple/include/theta_intersection_experimental.hpp +78 -0
- data/vendor/datasketches-cpp/tuple/include/theta_intersection_experimental_impl.hpp +43 -0
- data/vendor/datasketches-cpp/tuple/include/theta_set_difference_base.hpp +54 -0
- data/vendor/datasketches-cpp/tuple/include/theta_set_difference_base_impl.hpp +80 -0
- data/vendor/datasketches-cpp/tuple/include/theta_sketch_experimental.hpp +393 -0
- data/vendor/datasketches-cpp/tuple/include/theta_sketch_experimental_impl.hpp +481 -0
- data/vendor/datasketches-cpp/tuple/include/theta_union_base.hpp +60 -0
- data/vendor/datasketches-cpp/tuple/include/theta_union_base_impl.hpp +84 -0
- data/vendor/datasketches-cpp/tuple/include/theta_union_experimental.hpp +88 -0
- data/vendor/datasketches-cpp/tuple/include/theta_union_experimental_impl.hpp +47 -0
- data/vendor/datasketches-cpp/tuple/include/theta_update_sketch_base.hpp +259 -0
- data/vendor/datasketches-cpp/tuple/include/theta_update_sketch_base_impl.hpp +389 -0
- data/vendor/datasketches-cpp/tuple/include/tuple_a_not_b.hpp +57 -0
- data/vendor/datasketches-cpp/tuple/include/tuple_a_not_b_impl.hpp +33 -0
- data/vendor/datasketches-cpp/tuple/include/tuple_intersection.hpp +104 -0
- data/vendor/datasketches-cpp/tuple/include/tuple_intersection_impl.hpp +43 -0
- data/vendor/datasketches-cpp/tuple/include/tuple_sketch.hpp +496 -0
- data/vendor/datasketches-cpp/tuple/include/tuple_sketch_impl.hpp +587 -0
- data/vendor/datasketches-cpp/tuple/include/tuple_union.hpp +109 -0
- data/vendor/datasketches-cpp/tuple/include/tuple_union_impl.hpp +47 -0
- data/vendor/datasketches-cpp/tuple/test/CMakeLists.txt +53 -0
- data/vendor/datasketches-cpp/tuple/test/aod_1_compact_empty_from_java.sk +1 -0
- data/vendor/datasketches-cpp/tuple/test/aod_1_compact_estimation_from_java.sk +0 -0
- data/vendor/datasketches-cpp/tuple/test/aod_1_compact_non_empty_no_entries_from_java.sk +0 -0
- data/vendor/datasketches-cpp/tuple/test/aod_2_compact_exact_from_java.sk +0 -0
- data/vendor/datasketches-cpp/tuple/test/aod_3_compact_empty_from_java.sk +1 -0
- data/vendor/datasketches-cpp/tuple/test/array_of_doubles_sketch_test.cpp +298 -0
- data/vendor/datasketches-cpp/tuple/test/theta_a_not_b_experimental_test.cpp +250 -0
- data/vendor/datasketches-cpp/tuple/test/theta_compact_empty_from_java.sk +0 -0
- data/vendor/datasketches-cpp/tuple/test/theta_compact_estimation_from_java.sk +0 -0
- data/vendor/datasketches-cpp/tuple/test/theta_compact_single_item_from_java.sk +0 -0
- data/vendor/datasketches-cpp/tuple/test/theta_intersection_experimental_test.cpp +224 -0
- data/vendor/datasketches-cpp/tuple/test/theta_jaccard_similarity_test.cpp +144 -0
- data/vendor/datasketches-cpp/tuple/test/theta_sketch_experimental_test.cpp +247 -0
- data/vendor/datasketches-cpp/tuple/test/theta_union_experimental_test.cpp +44 -0
- data/vendor/datasketches-cpp/tuple/test/tuple_a_not_b_test.cpp +289 -0
- data/vendor/datasketches-cpp/tuple/test/tuple_intersection_test.cpp +235 -0
- data/vendor/datasketches-cpp/tuple/test/tuple_jaccard_similarity_test.cpp +98 -0
- data/vendor/datasketches-cpp/tuple/test/tuple_sketch_allocation_test.cpp +102 -0
- data/vendor/datasketches-cpp/tuple/test/tuple_sketch_test.cpp +249 -0
- data/vendor/datasketches-cpp/tuple/test/tuple_union_test.cpp +187 -0
- metadata +302 -0
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/*
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* Licensed to the Apache Software Foundation (ASF) under one
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* or more contributor license agreements. See the NOTICE file
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* distributed with this work for additional information
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* regarding copyright ownership. The ASF licenses this file
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* to you under the Apache License, Version 2.0 (the
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* "License"); you may not use this file except in compliance
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* with the License. You may obtain a copy of the License at
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*
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* http://www.apache.org/licenses/LICENSE-2.0
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*
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* Unless required by applicable law or agreed to in writing,
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* software distributed under the License is distributed on an
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* "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
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* KIND, either express or implied. See the License for the
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* specific language governing permissions and limitations
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* under the License.
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*/
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#ifndef CPC_UNION_HPP_
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#define CPC_UNION_HPP_
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#include <string>
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#include "cpc_sketch.hpp"
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#include "common_defs.hpp"
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namespace datasketches {
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/*
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* High performance C++ implementation of Compressed Probabilistic Counting (CPC) Union
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*
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* author Kevin Lang
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* author Alexander Saydakov
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*/
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// alias with default allocator for convenience
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typedef cpc_union_alloc<std::allocator<void>> cpc_union;
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template<typename A>
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class cpc_union_alloc {
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public:
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/**
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* Creates an instance of the union given the lg_k parameter and hash seed.
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* @param lg_k base 2 logarithm of the number of bins in the sketch
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* @param seed for hash function
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*/
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explicit cpc_union_alloc(uint8_t lg_k = CPC_DEFAULT_LG_K, uint64_t seed = DEFAULT_SEED);
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cpc_union_alloc(const cpc_union_alloc<A>& other);
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cpc_union_alloc(cpc_union_alloc<A>&& other) noexcept;
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~cpc_union_alloc();
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cpc_union_alloc<A>& operator=(const cpc_union_alloc<A>& other);
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cpc_union_alloc<A>& operator=(cpc_union_alloc<A>&& other) noexcept;
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/**
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* This method is to update the union with a given sketch (lvalue)
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* @param sketch to update the union with
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*/
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void update(const cpc_sketch_alloc<A>& sketch);
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/**
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* This method is to update the union with a given sketch (rvalue)
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* @param sketch to update the union with
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*/
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void update(cpc_sketch_alloc<A>&& sketch);
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/**
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* This method produces a copy of the current state of the union as a sketch.
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* @return the result of the union
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*/
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cpc_sketch_alloc<A> get_result() const;
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private:
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typedef typename std::allocator_traits<A>::template rebind_alloc<uint8_t> AllocU8;
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typedef typename std::allocator_traits<A>::template rebind_alloc<uint64_t> AllocU64;
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typedef typename std::allocator_traits<A>::template rebind_alloc<cpc_sketch_alloc<A>> AllocCpc;
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uint8_t lg_k;
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uint64_t seed;
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cpc_sketch_alloc<A>* accumulator;
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vector_u64<A> bit_matrix;
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template<typename S> void internal_update(S&& sketch); // to support both rvalue and lvalue
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cpc_sketch_alloc<A> get_result_from_accumulator() const;
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cpc_sketch_alloc<A> get_result_from_bit_matrix() const;
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void switch_to_bit_matrix();
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void walk_table_updating_sketch(const u32_table<A>& table);
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void or_table_into_matrix(const u32_table<A>& table);
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void or_window_into_matrix(const vector_u8<A>& sliding_window, uint8_t offset, uint8_t src_lg_k);
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void or_matrix_into_matrix(const vector_u64<A>& src_matrix, uint8_t src_lg_k);
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void reduce_k(uint8_t new_lg_k);
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};
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} /* namespace datasketches */
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#include "cpc_union_impl.hpp"
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#endif
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/*
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* Licensed to the Apache Software Foundation (ASF) under one
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* or more contributor license agreements. See the NOTICE file
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* distributed with this work for additional information
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* regarding copyright ownership. The ASF licenses this file
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* to you under the Apache License, Version 2.0 (the
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* "License"); you may not use this file except in compliance
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* with the License. You may obtain a copy of the License at
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*
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* http://www.apache.org/licenses/LICENSE-2.0
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*
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* Unless required by applicable law or agreed to in writing,
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* software distributed under the License is distributed on an
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* "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
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* KIND, either express or implied. See the License for the
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* specific language governing permissions and limitations
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* under the License.
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*/
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#ifndef CPC_UNION_IMPL_HPP_
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#define CPC_UNION_IMPL_HPP_
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+
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#include "count_zeros.hpp"
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+
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namespace datasketches {
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+
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template<typename A>
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cpc_union_alloc<A>::cpc_union_alloc(uint8_t lg_k, uint64_t seed):
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lg_k(lg_k),
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seed(seed),
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accumulator(nullptr),
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bit_matrix()
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{
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if (lg_k < CPC_MIN_LG_K || lg_k > CPC_MAX_LG_K) {
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throw std::invalid_argument("lg_k must be >= " + std::to_string(CPC_MIN_LG_K) + " and <= " + std::to_string(CPC_MAX_LG_K) + ": " + std::to_string(lg_k));
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+
}
|
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accumulator = new (AllocCpc().allocate(1)) cpc_sketch_alloc<A>(lg_k, seed);
|
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|
+
}
|
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+
|
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+
template<typename A>
|
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cpc_union_alloc<A>::cpc_union_alloc(const cpc_union_alloc<A>& other):
|
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lg_k(other.lg_k),
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+
seed(other.seed),
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+
accumulator(other.accumulator),
|
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+
bit_matrix(other.bit_matrix)
|
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+
{
|
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+
if (accumulator != nullptr) {
|
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|
+
accumulator = new (AllocCpc().allocate(1)) cpc_sketch_alloc<A>(*other.accumulator);
|
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|
+
}
|
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+
}
|
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+
|
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+
template<typename A>
|
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cpc_union_alloc<A>::cpc_union_alloc(cpc_union_alloc<A>&& other) noexcept:
|
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+
lg_k(other.lg_k),
|
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+
seed(other.seed),
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+
accumulator(other.accumulator),
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bit_matrix(std::move(other.bit_matrix))
|
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{
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other.accumulator = nullptr;
|
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}
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+
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template<typename A>
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cpc_union_alloc<A>::~cpc_union_alloc() {
|
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if (accumulator != nullptr) {
|
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accumulator->~cpc_sketch_alloc<A>();
|
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+
AllocCpc().deallocate(accumulator, 1);
|
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|
+
}
|
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+
}
|
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+
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+
template<typename A>
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cpc_union_alloc<A>& cpc_union_alloc<A>::operator=(const cpc_union_alloc<A>& other) {
|
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+
cpc_union_alloc<A> copy(other);
|
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std::swap(lg_k, copy.lg_k);
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seed = copy.seed;
|
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std::swap(accumulator, copy.accumulator);
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bit_matrix = std::move(copy.bit_matrix);
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return *this;
|
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}
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+
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template<typename A>
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cpc_union_alloc<A>& cpc_union_alloc<A>::operator=(cpc_union_alloc<A>&& other) noexcept {
|
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std::swap(lg_k, other.lg_k);
|
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seed = other.seed;
|
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+
std::swap(accumulator, other.accumulator);
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bit_matrix = std::move(other.bit_matrix);
|
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return *this;
|
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+
}
|
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+
|
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+
template<typename A>
|
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void cpc_union_alloc<A>::update(const cpc_sketch_alloc<A>& sketch) {
|
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internal_update(sketch);
|
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}
|
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+
|
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template<typename A>
|
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void cpc_union_alloc<A>::update(cpc_sketch_alloc<A>&& sketch) {
|
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internal_update(std::forward<cpc_sketch_alloc<A>>(sketch));
|
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+
}
|
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+
|
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+
template<typename A>
|
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+
template<typename S>
|
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+
void cpc_union_alloc<A>::internal_update(S&& sketch) {
|
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const uint16_t seed_hash_union = compute_seed_hash(seed);
|
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|
+
const uint16_t seed_hash_sketch = compute_seed_hash(sketch.seed);
|
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|
+
if (seed_hash_union != seed_hash_sketch) {
|
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+
throw std::invalid_argument("Incompatible seed hashes: " + std::to_string(seed_hash_union) + ", "
|
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|
+
+ std::to_string(seed_hash_sketch));
|
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|
+
}
|
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|
+
const auto src_flavor = sketch.determine_flavor();
|
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|
+
if (cpc_sketch_alloc<A>::flavor::EMPTY == src_flavor) return;
|
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+
|
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|
+
if (sketch.get_lg_k() < lg_k) reduce_k(sketch.get_lg_k());
|
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|
+
if (sketch.get_lg_k() < lg_k) throw std::logic_error("sketch lg_k < union lg_k");
|
113
|
+
|
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|
+
if (accumulator == nullptr && bit_matrix.size() == 0) throw std::logic_error("both accumulator and bit matrix are absent");
|
115
|
+
|
116
|
+
if (cpc_sketch_alloc<A>::flavor::SPARSE == src_flavor && accumulator != nullptr) { // Case A
|
117
|
+
if (bit_matrix.size() > 0) throw std::logic_error("union bit_matrix is not expected");
|
118
|
+
const auto initial_dest_flavor = accumulator->determine_flavor();
|
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|
+
if (cpc_sketch_alloc<A>::flavor::EMPTY != initial_dest_flavor &&
|
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|
+
cpc_sketch_alloc<A>::flavor::SPARSE != initial_dest_flavor) throw std::logic_error("wrong flavor");
|
121
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+
|
122
|
+
// The following partially fixes the snowplow problem provided that the K's are equal.
|
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|
+
if (cpc_sketch_alloc<A>::flavor::EMPTY == initial_dest_flavor && lg_k == sketch.get_lg_k()) {
|
124
|
+
*accumulator = std::forward<S>(sketch);
|
125
|
+
return;
|
126
|
+
}
|
127
|
+
|
128
|
+
walk_table_updating_sketch(sketch.surprising_value_table);
|
129
|
+
const auto final_dst_flavor = accumulator->determine_flavor();
|
130
|
+
// if the accumulator has graduated beyond sparse, switch to a bit matrix representation
|
131
|
+
if (final_dst_flavor != cpc_sketch_alloc<A>::flavor::EMPTY && final_dst_flavor != cpc_sketch_alloc<A>::flavor::SPARSE) {
|
132
|
+
switch_to_bit_matrix();
|
133
|
+
}
|
134
|
+
return;
|
135
|
+
}
|
136
|
+
|
137
|
+
if (cpc_sketch_alloc<A>::flavor::SPARSE == src_flavor && bit_matrix.size() > 0) { // Case B
|
138
|
+
if (accumulator != nullptr) throw std::logic_error("union accumulator != null");
|
139
|
+
or_table_into_matrix(sketch.surprising_value_table);
|
140
|
+
return;
|
141
|
+
}
|
142
|
+
|
143
|
+
if (cpc_sketch_alloc<A>::flavor::HYBRID != src_flavor && cpc_sketch_alloc<A>::flavor::PINNED != src_flavor
|
144
|
+
&& cpc_sketch_alloc<A>::flavor::SLIDING != src_flavor) throw std::logic_error("wrong flavor");
|
145
|
+
|
146
|
+
// source is past SPARSE mode, so make sure that dest is a bit matrix
|
147
|
+
if (accumulator != nullptr) {
|
148
|
+
if (bit_matrix.size() > 0) throw std::logic_error("union bit matrix is not expected");
|
149
|
+
const auto dst_flavor = accumulator->determine_flavor();
|
150
|
+
if (cpc_sketch_alloc<A>::flavor::EMPTY != dst_flavor && cpc_sketch_alloc<A>::flavor::SPARSE != dst_flavor) {
|
151
|
+
throw std::logic_error("wrong flavor");
|
152
|
+
}
|
153
|
+
switch_to_bit_matrix();
|
154
|
+
}
|
155
|
+
if (bit_matrix.size() == 0) throw std::logic_error("union bit_matrix is expected");
|
156
|
+
|
157
|
+
if (cpc_sketch_alloc<A>::flavor::HYBRID == src_flavor || cpc_sketch_alloc<A>::flavor::PINNED == src_flavor) { // Case C
|
158
|
+
or_window_into_matrix(sketch.sliding_window, sketch.window_offset, sketch.get_lg_k());
|
159
|
+
or_table_into_matrix(sketch.surprising_value_table);
|
160
|
+
return;
|
161
|
+
}
|
162
|
+
|
163
|
+
// SLIDING mode involves inverted logic, so we can't just walk the source sketch.
|
164
|
+
// Instead, we convert it to a bitMatrix that can be OR'ed into the destination.
|
165
|
+
if (cpc_sketch_alloc<A>::flavor::SLIDING != src_flavor) throw std::logic_error("wrong flavor"); // Case D
|
166
|
+
vector_u64<A> src_matrix = sketch.build_bit_matrix();
|
167
|
+
or_matrix_into_matrix(src_matrix, sketch.get_lg_k());
|
168
|
+
}
|
169
|
+
|
170
|
+
template<typename A>
|
171
|
+
cpc_sketch_alloc<A> cpc_union_alloc<A>::get_result() const {
|
172
|
+
if (accumulator != nullptr) {
|
173
|
+
if (bit_matrix.size() > 0) throw std::logic_error("bit_matrix is not expected");
|
174
|
+
return get_result_from_accumulator();
|
175
|
+
}
|
176
|
+
if (bit_matrix.size() == 0) throw std::logic_error("bit_matrix is expected");
|
177
|
+
return get_result_from_bit_matrix();
|
178
|
+
}
|
179
|
+
|
180
|
+
template<typename A>
|
181
|
+
cpc_sketch_alloc<A> cpc_union_alloc<A>::get_result_from_accumulator() const {
|
182
|
+
if (lg_k != accumulator->get_lg_k()) throw std::logic_error("lg_k != accumulator->lg_k");
|
183
|
+
if (accumulator->get_num_coupons() == 0) {
|
184
|
+
return cpc_sketch_alloc<A>(lg_k, seed);
|
185
|
+
}
|
186
|
+
if (accumulator->determine_flavor() != cpc_sketch_alloc<A>::flavor::SPARSE) throw std::logic_error("wrong flavor");
|
187
|
+
cpc_sketch_alloc<A> copy(*accumulator);
|
188
|
+
copy.was_merged = true;
|
189
|
+
return copy;
|
190
|
+
}
|
191
|
+
|
192
|
+
template<typename A>
|
193
|
+
cpc_sketch_alloc<A> cpc_union_alloc<A>::get_result_from_bit_matrix() const {
|
194
|
+
const uint64_t k = 1 << lg_k;
|
195
|
+
const uint64_t num_coupons = count_bits_set_in_matrix(bit_matrix.data(), k);
|
196
|
+
|
197
|
+
const auto flavor = cpc_sketch_alloc<A>::determine_flavor(lg_k, num_coupons);
|
198
|
+
if (flavor != cpc_sketch_alloc<A>::flavor::HYBRID && flavor != cpc_sketch_alloc<A>::flavor::PINNED
|
199
|
+
&& flavor != cpc_sketch_alloc<A>::flavor::SLIDING) throw std::logic_error("wrong flavor");
|
200
|
+
|
201
|
+
const uint8_t offset = cpc_sketch_alloc<A>::determine_correct_offset(lg_k, num_coupons);
|
202
|
+
|
203
|
+
vector_u8<A> sliding_window(k);
|
204
|
+
// don't need to zero the window's memory
|
205
|
+
|
206
|
+
// dynamically growing caused snowplow effect
|
207
|
+
uint8_t table_lg_size = lg_k - 4; // K/16; in some cases this will end up being oversized
|
208
|
+
if (table_lg_size < 2) table_lg_size = 2;
|
209
|
+
u32_table<A> table(table_lg_size, 6 + lg_k);
|
210
|
+
|
211
|
+
// the following should work even when the offset is zero
|
212
|
+
const uint64_t mask_for_clearing_window = (static_cast<uint64_t>(0xff) << offset) ^ UINT64_MAX;
|
213
|
+
const uint64_t mask_for_flipping_early_zone = (static_cast<uint64_t>(1) << offset) - 1;
|
214
|
+
uint64_t all_surprises_ored = 0;
|
215
|
+
|
216
|
+
// The snowplow effect was caused by processing the rows in order,
|
217
|
+
// but we have fixed it by using a sufficiently large hash table.
|
218
|
+
for (unsigned i = 0; i < k; i++) {
|
219
|
+
uint64_t pattern = bit_matrix[i];
|
220
|
+
sliding_window[i] = (pattern >> offset) & 0xff;
|
221
|
+
pattern &= mask_for_clearing_window;
|
222
|
+
pattern ^= mask_for_flipping_early_zone; // this flipping converts surprising 0's to 1's
|
223
|
+
all_surprises_ored |= pattern;
|
224
|
+
while (pattern != 0) {
|
225
|
+
const uint8_t col = count_trailing_zeros_in_u64(pattern);
|
226
|
+
pattern = pattern ^ (static_cast<uint64_t>(1) << col); // erase the 1
|
227
|
+
const uint32_t row_col = (i << 6) | col;
|
228
|
+
bool is_novel = table.maybe_insert(row_col);
|
229
|
+
if (!is_novel) throw std::logic_error("is_novel != true");
|
230
|
+
}
|
231
|
+
}
|
232
|
+
|
233
|
+
// at this point we could shrink an oversized hash table, but the relative waste isn't very big
|
234
|
+
|
235
|
+
uint8_t first_interesting_column = count_trailing_zeros_in_u64(all_surprises_ored);
|
236
|
+
if (first_interesting_column > offset) first_interesting_column = offset; // corner case
|
237
|
+
|
238
|
+
// HIP-related fields will contain zeros, and that is okay
|
239
|
+
return cpc_sketch_alloc<A>(lg_k, num_coupons, first_interesting_column, std::move(table), std::move(sliding_window), false, 0, 0, seed);
|
240
|
+
}
|
241
|
+
|
242
|
+
template<typename A>
|
243
|
+
void cpc_union_alloc<A>::switch_to_bit_matrix() {
|
244
|
+
bit_matrix = accumulator->build_bit_matrix();
|
245
|
+
accumulator->~cpc_sketch_alloc<A>();
|
246
|
+
AllocCpc().deallocate(accumulator, 1);
|
247
|
+
accumulator = nullptr;
|
248
|
+
}
|
249
|
+
|
250
|
+
template<typename A>
|
251
|
+
void cpc_union_alloc<A>::walk_table_updating_sketch(const u32_table<A>& table) {
|
252
|
+
const uint32_t* slots = table.get_slots();
|
253
|
+
const size_t num_slots = 1 << table.get_lg_size();
|
254
|
+
const uint64_t dst_mask = (((1 << accumulator->get_lg_k()) - 1) << 6) | 63; // downsamples when dst lgK < src LgK
|
255
|
+
|
256
|
+
// Using a golden ratio stride fixes the snowplow effect.
|
257
|
+
const double golden = 0.6180339887498949025;
|
258
|
+
size_t stride = static_cast<size_t>(golden * static_cast<double>(num_slots));
|
259
|
+
if (stride < 2) throw std::logic_error("stride < 2");
|
260
|
+
if (stride == ((stride >> 1) << 1)) stride += 1; // force the stride to be odd
|
261
|
+
if (stride < 3 || stride >= num_slots) throw std::out_of_range("stride out of range");
|
262
|
+
|
263
|
+
for (size_t i = 0, j = 0; i < num_slots; i++, j += stride) {
|
264
|
+
j &= num_slots - 1;
|
265
|
+
const uint32_t row_col = slots[j];
|
266
|
+
if (row_col != UINT32_MAX) {
|
267
|
+
accumulator->row_col_update(row_col & dst_mask);
|
268
|
+
}
|
269
|
+
}
|
270
|
+
}
|
271
|
+
|
272
|
+
template<typename A>
|
273
|
+
void cpc_union_alloc<A>::or_table_into_matrix(const u32_table<A>& table) {
|
274
|
+
const uint32_t* slots = table.get_slots();
|
275
|
+
const size_t num_slots = 1 << table.get_lg_size();
|
276
|
+
const uint64_t dest_mask = (1 << lg_k) - 1; // downsamples when dst lgK < sr LgK
|
277
|
+
for (size_t i = 0; i < num_slots; i++) {
|
278
|
+
const uint32_t row_col = slots[i];
|
279
|
+
if (row_col != UINT32_MAX) {
|
280
|
+
const uint8_t col = row_col & 63;
|
281
|
+
const size_t row = row_col >> 6;
|
282
|
+
bit_matrix[row & dest_mask] |= static_cast<uint64_t>(1) << col; // set the bit
|
283
|
+
}
|
284
|
+
}
|
285
|
+
}
|
286
|
+
|
287
|
+
template<typename A>
|
288
|
+
void cpc_union_alloc<A>::or_window_into_matrix(const vector_u8<A>& sliding_window, uint8_t offset, uint8_t src_lg_k) {
|
289
|
+
if (lg_k > src_lg_k) throw std::logic_error("dst LgK > src LgK");
|
290
|
+
const uint64_t dst_mask = (1 << lg_k) - 1; // downsamples when dst lgK < src LgK
|
291
|
+
const size_t src_k = 1 << src_lg_k;
|
292
|
+
for (size_t src_row = 0; src_row < src_k; src_row++) {
|
293
|
+
bit_matrix[src_row & dst_mask] |= static_cast<uint64_t>(sliding_window[src_row]) << offset;
|
294
|
+
}
|
295
|
+
}
|
296
|
+
|
297
|
+
template<typename A>
|
298
|
+
void cpc_union_alloc<A>::or_matrix_into_matrix(const vector_u64<A>& src_matrix, uint8_t src_lg_k) {
|
299
|
+
if (lg_k > src_lg_k) throw std::logic_error("dst LgK > src LgK");
|
300
|
+
const uint64_t dst_mask = (1 << lg_k) - 1; // downsamples when dst lgK < src LgK
|
301
|
+
const size_t src_k = 1 << src_lg_k;
|
302
|
+
for (size_t src_row = 0; src_row < src_k; src_row++) {
|
303
|
+
bit_matrix[src_row & dst_mask] |= src_matrix[src_row];
|
304
|
+
}
|
305
|
+
}
|
306
|
+
|
307
|
+
template<typename A>
|
308
|
+
void cpc_union_alloc<A>::reduce_k(uint8_t new_lg_k) {
|
309
|
+
if (new_lg_k >= lg_k) throw std::logic_error("new LgK >= union lgK");
|
310
|
+
if (accumulator == nullptr && bit_matrix.size() == 0) throw std::logic_error("both accumulator and bit_matrix are absent");
|
311
|
+
|
312
|
+
if (bit_matrix.size() > 0) { // downsample the unioner's bit matrix
|
313
|
+
if (accumulator != nullptr) throw std::logic_error("accumulator is not null");
|
314
|
+
vector_u64<A> old_matrix = std::move(bit_matrix);
|
315
|
+
const uint8_t old_lg_k = lg_k;
|
316
|
+
const size_t new_k = 1 << new_lg_k;
|
317
|
+
bit_matrix = vector_u64<A>(new_k, 0);
|
318
|
+
lg_k = new_lg_k;
|
319
|
+
or_matrix_into_matrix(old_matrix, old_lg_k);
|
320
|
+
return;
|
321
|
+
}
|
322
|
+
|
323
|
+
if (accumulator != nullptr) { // downsample the unioner's sketch
|
324
|
+
if (bit_matrix.size() > 0) throw std::logic_error("bit_matrix is not expected");
|
325
|
+
if (!accumulator->is_empty()) {
|
326
|
+
cpc_sketch_alloc<A> old_accumulator(*accumulator);
|
327
|
+
*accumulator = cpc_sketch_alloc<A>(new_lg_k, seed);
|
328
|
+
walk_table_updating_sketch(old_accumulator.surprising_value_table);
|
329
|
+
}
|
330
|
+
lg_k = new_lg_k;
|
331
|
+
|
332
|
+
const auto final_new_flavor = accumulator->determine_flavor();
|
333
|
+
// if the new sketch has graduated beyond sparse, convert to bit_matrix
|
334
|
+
if (final_new_flavor != cpc_sketch_alloc<A>::flavor::EMPTY &&
|
335
|
+
final_new_flavor != cpc_sketch_alloc<A>::flavor::SPARSE) {
|
336
|
+
switch_to_bit_matrix();
|
337
|
+
}
|
338
|
+
return;
|
339
|
+
}
|
340
|
+
|
341
|
+
throw std::logic_error("invalid state");
|
342
|
+
}
|
343
|
+
|
344
|
+
} /* namespace datasketches */
|
345
|
+
|
346
|
+
#endif
|
@@ -0,0 +1,137 @@
|
|
1
|
+
/*
|
2
|
+
* Licensed to the Apache Software Foundation (ASF) under one
|
3
|
+
* or more contributor license agreements. See the NOTICE file
|
4
|
+
* distributed with this work for additional information
|
5
|
+
* regarding copyright ownership. The ASF licenses this file
|
6
|
+
* to you under the Apache License, Version 2.0 (the
|
7
|
+
* "License"); you may not use this file except in compliance
|
8
|
+
* with the License. You may obtain a copy of the License at
|
9
|
+
*
|
10
|
+
* http://www.apache.org/licenses/LICENSE-2.0
|
11
|
+
*
|
12
|
+
* Unless required by applicable law or agreed to in writing,
|
13
|
+
* software distributed under the License is distributed on an
|
14
|
+
* "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
|
15
|
+
* KIND, either express or implied. See the License for the
|
16
|
+
* specific language governing permissions and limitations
|
17
|
+
* under the License.
|
18
|
+
*/
|
19
|
+
|
20
|
+
#ifndef CPC_UTIL_HPP_
|
21
|
+
#define CPC_UTIL_HPP_
|
22
|
+
|
23
|
+
#include <stdexcept>
|
24
|
+
|
25
|
+
namespace datasketches {
|
26
|
+
|
27
|
+
static inline uint16_t compute_seed_hash(uint64_t seed) {
|
28
|
+
HashState hashes;
|
29
|
+
MurmurHash3_x64_128(&seed, sizeof(seed), 0, hashes);
|
30
|
+
return hashes.h1 & 0xffff;
|
31
|
+
}
|
32
|
+
|
33
|
+
static inline uint64_t divide_longs_rounding_up(uint64_t x, uint64_t y) {
|
34
|
+
if (y == 0) throw std::invalid_argument("divide_longs_rounding_up: bad argument");
|
35
|
+
const uint64_t quotient = x / y;
|
36
|
+
if (quotient * y == x) return (quotient);
|
37
|
+
else return quotient + 1;
|
38
|
+
}
|
39
|
+
|
40
|
+
static inline uint64_t long_floor_log2_of_long(uint64_t x) {
|
41
|
+
if (x < 1) throw std::invalid_argument("long_floor_log2_of_long: bad argument");
|
42
|
+
uint64_t p = 0;
|
43
|
+
uint64_t y = 1;
|
44
|
+
while (true) {
|
45
|
+
if (y == x) return p;
|
46
|
+
if (y > x) return p - 1;
|
47
|
+
p += 1;
|
48
|
+
y <<= 1;
|
49
|
+
}
|
50
|
+
}
|
51
|
+
|
52
|
+
// This place-holder code was inadequate because it caused
|
53
|
+
// the cost of the post-merge get_result() operation to be O(C)
|
54
|
+
// instead of O(K). It did have the advantage of being
|
55
|
+
// very simple and trustworthy during initial testing.
|
56
|
+
static inline uint64_t wegner_count_bits_set_in_matrix(const uint64_t* array, size_t length) {
|
57
|
+
uint64_t pattern = 0;
|
58
|
+
uint64_t count = 0;
|
59
|
+
// clock_t t0, t1;
|
60
|
+
// t0 = clock();
|
61
|
+
// Wegner's Bit-Counting Algorithm, CACM 3 (1960), p. 322.
|
62
|
+
for (uint64_t i = 0; i < length; i++) {
|
63
|
+
pattern = array[i];
|
64
|
+
while (pattern != 0) {
|
65
|
+
pattern &= (pattern - 1);
|
66
|
+
count++;
|
67
|
+
}
|
68
|
+
}
|
69
|
+
// t1 = clock();
|
70
|
+
// printf ("\n(Wegner CountBitsTime %.1f)\n", ((double) (t1 - t0)) / 1000.0);
|
71
|
+
// fflush (stdout);
|
72
|
+
return count;
|
73
|
+
}
|
74
|
+
|
75
|
+
// Note: this is an adaptation of the Java code,
|
76
|
+
// which is apparently a variation of Figure 5-2 in "Hacker's Delight"
|
77
|
+
// by Henry S. Warren.
|
78
|
+
static inline uint64_t warren_bit_count(uint64_t i) {
|
79
|
+
i = i - ((i >> 1) & 0x5555555555555555ULL);
|
80
|
+
i = (i & 0x3333333333333333ULL) + ((i >> 2) & 0x3333333333333333ULL);
|
81
|
+
i = (i + (i >> 4)) & 0x0f0f0f0f0f0f0f0fULL;
|
82
|
+
i = i + (i >> 8);
|
83
|
+
i = i + (i >> 16);
|
84
|
+
i = i + (i >> 32);
|
85
|
+
return i & 0x7f;
|
86
|
+
}
|
87
|
+
|
88
|
+
static inline uint64_t warren_count_bits_set_in_matrix(const uint64_t* array, size_t length) {
|
89
|
+
uint64_t count = 0;
|
90
|
+
for (size_t i = 0; i < length; i++) {
|
91
|
+
count += warren_bit_count(array[i]);
|
92
|
+
}
|
93
|
+
return count;
|
94
|
+
}
|
95
|
+
|
96
|
+
// This code is Figure 5-9 in "Hacker's Delight" by Henry S. Warren.
|
97
|
+
|
98
|
+
#define CSA(h,l,a,b,c) {uint64_t u = a ^ b; uint64_t v = c; h = (a & b) | (u & v); l = u ^ v;}
|
99
|
+
|
100
|
+
static inline uint64_t count_bits_set_in_matrix(const uint64_t* a, size_t length) {
|
101
|
+
if ((length & 0x7) != 0) throw std::invalid_argument("the length of the array must be a multiple of 8");
|
102
|
+
uint64_t total = 0;
|
103
|
+
uint64_t ones, twos, twos_a, twos_b, fours, fours_a, fours_b, eights;
|
104
|
+
fours = twos = ones = 0;
|
105
|
+
|
106
|
+
for (size_t i = 0; i <= length - 8; i = i + 8) {
|
107
|
+
CSA(twos_a, ones, ones, a[i+0], a[i+1]);
|
108
|
+
CSA(twos_b, ones, ones, a[i+2], a[i+3]);
|
109
|
+
CSA(fours_a, twos, twos, twos_a, twos_b);
|
110
|
+
|
111
|
+
CSA(twos_a, ones, ones, a[i+4], a[i+5]);
|
112
|
+
CSA(twos_b, ones, ones, a[i+6], a[i+7]);
|
113
|
+
CSA(fours_b, twos, twos, twos_a, twos_b);
|
114
|
+
|
115
|
+
CSA(eights, fours, fours, fours_a, fours_b);
|
116
|
+
|
117
|
+
total += warren_bit_count(eights);
|
118
|
+
}
|
119
|
+
total = 8 * total + 4 * warren_bit_count(fours) + 2 * warren_bit_count(twos) + warren_bit_count(ones);
|
120
|
+
|
121
|
+
// Because I still don't fully trust this fancy version
|
122
|
+
// assert(total == wegner_count_bits_set_in_matrix(A, length));
|
123
|
+
//if (total != wegner_count_bits_set_in_matrix(a, length)) throw std::logic_error("count_bits_set_in_matrix error");
|
124
|
+
|
125
|
+
return total;
|
126
|
+
}
|
127
|
+
|
128
|
+
// Here are some timings made with quickTestMerge.c
|
129
|
+
// for the "5 5" case:
|
130
|
+
|
131
|
+
// Wegner CountBitsTime 29.3
|
132
|
+
// Warren CountBitsTime 5.3
|
133
|
+
// CSA CountBitsTime 4.3
|
134
|
+
|
135
|
+
} /* namespace datasketches */
|
136
|
+
|
137
|
+
#endif
|