datacite-mapping 0.1.15 → 0.1.16
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- checksums.yaml +4 -4
- data/CHANGES.md +5 -0
- data/README.md +21 -0
- data/datacite-mapping.gemspec +1 -1
- data/lib/datacite/mapping/date.rb +2 -2
- data/lib/datacite/mapping/identifier.rb +19 -3
- data/lib/datacite/mapping/module_info.rb +1 -1
- data/lib/datacite/mapping/nonvalidating/identifier.rb +40 -0
- data/lib/datacite/mapping/nonvalidating/subject.rb +43 -0
- data/lib/datacite/mapping/nonvalidating.rb +10 -0
- data/lib/datacite/mapping/resource.rb +19 -14
- data/spec/data/dash1-datacite-xml/dataone-ark+=c5146=r3059p-mrt-datacite.xml +42 -0
- data/spec/data/dash1-datacite-xml/dataone-ark+=c5146=r31017-mrt-datacite.xml +37 -0
- data/spec/data/dash1-datacite-xml/dataone-ark+=c5146=r3201j-mrt-datacite.xml +50 -0
- data/spec/data/dash1-datacite-xml/dataone-ark+=c5146=r33w26-mrt-datacite.xml +45 -0
- data/spec/data/dash1-datacite-xml/dataone-ark+=c5146=r34s3v-mrt-datacite.xml +35 -0
- data/spec/data/dash1-datacite-xml/dataone-ark+=c5146=r36p4t-mrt-datacite.xml +53 -0
- data/spec/data/dash1-datacite-xml/dataone-ark+=c5146=r39g6f-mrt-datacite.xml +68 -0
- data/spec/data/dash1-datacite-xml/dataone-ark+=c5146=r3cc7d-mrt-datacite.xml +42 -0
- data/spec/data/dash1-datacite-xml/dataone-ark+=c5146=r3d59d-mrt-datacite.xml +45 -0
- data/spec/data/dash1-datacite-xml/dataone-ark+=c5146=r3f59q-mrt-datacite.xml +68 -0
- data/spec/data/dash1-datacite-xml/dataone-ark+=c5146=r3g591-mrt-datacite.xml +35 -0
- data/spec/data/dash1-datacite-xml/dataone-ark+=c5146=r3k016-mrt-datacite.xml +68 -0
- data/spec/data/dash1-datacite-xml/dataone-ark+=c5146=r3kw2j-mrt-datacite.xml +58 -0
- data/spec/data/dash1-datacite-xml/dataone-ark+=c5146=r3mw2v-mrt-datacite.xml +33 -0
- data/spec/data/dash1-datacite-xml/dataone-ark+=c5146=r3np4v-mrt-datacite.xml +40 -0
- data/spec/data/dash1-datacite-xml/dataone-ark+=c5146=r3pp45-mrt-datacite.xml +47 -0
- data/spec/data/dash1-datacite-xml/dataone-ark+=c5146=r3rp4s-mrt-datacite.xml +34 -0
- data/spec/data/dash1-datacite-xml/dataone-ark+=c5146=r3tg63-mrt-datacite.xml +36 -0
- data/spec/data/dash1-datacite-xml/ucb-ark+=b6078=d1159q-mrt-datacite.xml +53 -0
- data/spec/data/dash1-datacite-xml/ucb-ark+=b6078=d17g6j-mrt-datacite.xml +50 -0
- data/spec/data/dash1-datacite-xml/ucb-ark+=b6078=d1c88g-mrt-datacite.xml +47 -0
- data/spec/data/dash1-datacite-xml/ucb-ark+=b6078=d1cc74-mrt-datacite.xml +71 -0
- data/spec/data/dash1-datacite-xml/ucb-ark+=b6078=d1h019-mrt-datacite.xml +38 -0
- data/spec/data/dash1-datacite-xml/ucb-ark+=b6078=d1ms3x-mrt-datacite.xml +42 -0
- data/spec/data/dash1-datacite-xml/ucb-ark+=b6078=d1mw2k-mrt-datacite.xml +39 -0
- data/spec/data/dash1-datacite-xml/ucb-ark+=b6078=d1rg66-mrt-datacite.xml +39 -0
- data/spec/data/dash1-datacite-xml/ucb-ark+=b6078=d1rp4h-mrt-datacite.xml +53 -0
- data/spec/data/dash1-datacite-xml/ucb-ark+=b6078=d1wc7s-mrt-datacite.xml +49 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d1001p-mrt-datacite.xml +51 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d1059f-mrt-datacite.xml +65 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d11010-mrt-datacite.xml +49 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d1159r-mrt-datacite.xml +79 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d12019-mrt-datacite.xml +60 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d12s30-mrt-datacite.xml +51 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d1301m-mrt-datacite.xml +66 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d13s39-mrt-datacite.xml +49 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d13w2z-mrt-datacite.xml +60 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d14s3m-mrt-datacite.xml +64 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d15k5m-mrt-datacite.xml +66 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d15p48-mrt-datacite.xml +60 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d16k5x-mrt-datacite.xml +49 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d16p4k-mrt-datacite.xml +62 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d17g6k-mrt-datacite.xml +50 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d17p4w-mrt-datacite.xml +69 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d18g6w-mrt-datacite.xml +69 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d1988w-mrt-datacite.xml +66 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d19g66-mrt-datacite.xml +74 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d1b886-mrt-datacite.xml +53 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d1bc7v-mrt-datacite.xml +67 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d1c88h-mrt-datacite.xml +59 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d1cc75-mrt-datacite.xml +62 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d1d595-mrt-datacite.xml +50 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d1f30c-mrt-datacite.xml +115 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d1f59g-mrt-datacite.xml +71 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d1g011-mrt-datacite.xml +52 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d1g59s-mrt-datacite.xml +81 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d1h01b-mrt-datacite.xml +66 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d1h593-mrt-datacite.xml +62 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d1j01n-mrt-datacite.xml +60 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d1js3b-mrt-datacite.xml +55 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d1k01z-mrt-datacite.xml +67 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d1ks3n-mrt-datacite.xml +50 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d1kw29-mrt-datacite.xml +82 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d1ms3z-mrt-datacite.xml +48 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d1mw2m-mrt-datacite.xml +67 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d1np4m-mrt-datacite.xml +51 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d1pk58-mrt-datacite.xml +47 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d1pp4x-mrt-datacite.xml +67 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d1qg6x-mrt-datacite.xml +53 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d1qp47-mrt-datacite.xml +68 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d1rg67-mrt-datacite.xml +48 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d1rp4j-mrt-datacite.xml +70 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d1sg6j-mrt-datacite.xml +85 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d1t88j-mrt-datacite.xml +53 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d1tg6v-mrt-datacite.xml +66 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d1v88v-mrt-datacite.xml +53 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d1vc7h-mrt-datacite.xml +64 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d1w885-mrt-datacite.xml +50 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d1wc7t-mrt-datacite.xml +71 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d1x59t-mrt-datacite.xml +47 -0
- data/spec/data/dash1-datacite-xml/uci-ark+=b7280=d1z594-mrt-datacite.xml +62 -0
- data/spec/data/dash1-datacite-xml/ucla-ark+=b5060=d2qr4v2t-mrt-datacite.xml +57 -0
- data/spec/data/dash1-datacite-xml/ucla-ark+=b5068=d1cc7x-mrt-datacite.xml +41 -0
- data/spec/data/dash1-datacite-xml/ucla-ark+=b5068=d1h59v-mrt-datacite.xml +33 -0
- data/spec/data/dash1-datacite-xml/ucla-ark+=b5068=d1rp49-mrt-datacite.xml +36 -0
- data/spec/data/dash1-datacite-xml/ucla-ark+=b5068=d1wc7k-mrt-datacite.xml +46 -0
- data/spec/data/dash1-datacite-xml/ucm-ark+=13030=m51g217t-mrt-datacite.xml +28 -0
- data/spec/data/dash1-datacite-xml/ucm-ark+=b6071=z7wc73-mrt-datacite.xml +83 -0
- data/spec/data/dash1-datacite-xml/ucop-ark+=b5060=d8301x-mrt-datacite.xml +39 -0
- data/spec/data/dash1-datacite-xml/ucop-ark+=b5060=d86p4w-mrt-datacite.xml +38 -0
- data/spec/data/dash1-datacite-xml/ucop-ark+=b5060=d8bc75-mrt-datacite.xml +40 -0
- data/spec/data/dash1-datacite-xml/ucop-ark+=b5060=d8g593-mrt-datacite.xml +39 -0
- data/spec/data/dash1-datacite-xml/ucop-ark+=b5060=d8h59d-mrt-datacite.xml +53 -0
- data/spec/data/dash1-datacite-xml/ucop-ark+=b5060=d8kw2m-mrt-datacite.xml +39 -0
- data/spec/data/dash1-datacite-xml/ucop-ark+=b5060=d8rp4v-mrt-datacite.xml +52 -0
- data/spec/data/dash1-datacite-xml/ucop-ark+=b5060=d8z59f-mrt-datacite.xml +42 -0
- data/spec/data/dash1-datacite-xml/ucsc-ark+=b7291=d11592-mrt-datacite.xml +38 -0
- data/spec/data/dash1-datacite-xml/ucsc-ark+=b7291=d17p46-mrt-datacite.xml +43 -0
- data/spec/data/dash1-datacite-xml/ucsc-ark+=b7291=d1h59d-mrt-datacite.xml +43 -0
- data/spec/data/dash1-datacite-xml/ucsc-ark+=b7291=d1mw2x-mrt-datacite.xml +54 -0
- data/spec/data/dash1-datacite-xml/ucsc-ark+=b7291=d1wc74-mrt-datacite.xml +55 -0
- data/spec/data/dash1-datacite-xml/ucsf-ark+=b7272=q6057cv6-mrt-datacite.xml +96 -0
- data/spec/data/dash1-datacite-xml/ucsf-ark+=b7272=q6154f00-mrt-datacite.xml +73 -0
- data/spec/data/dash1-datacite-xml/ucsf-ark+=b7272=q61z429d-mrt-datacite.xml +29 -0
- data/spec/data/dash1-datacite-xml/ucsf-ark+=b7272=q62z13fs-mrt-datacite.xml +43 -0
- data/spec/data/dash1-datacite-xml/ucsf-ark+=b7272=q65q4t1r-mrt-datacite.xml +25 -0
- data/spec/data/dash1-datacite-xml/ucsf-ark+=b7272=q66q1v54-mrt-datacite.xml +42 -0
- data/spec/data/dash1-datacite-xml/ucsf-ark+=b7272=q67p8w9z-mrt-datacite.xml +63 -0
- data/spec/data/dash1-datacite-xml/ucsf-ark+=b7272=q68g8hmp-mrt-datacite.xml +24 -0
- data/spec/data/dash1-datacite-xml/ucsf-ark+=b7272=q6bg2kwf-mrt-datacite.xml +63 -0
- data/spec/data/dash1-datacite-xml/ucsf-ark+=b7272=q6c8276k-mrt-datacite.xml +43 -0
- data/spec/data/dash1-datacite-xml/ucsf-ark+=b7272=q6cc0xmh-mrt-datacite.xml +63 -0
- data/spec/data/dash1-datacite-xml/ucsf-ark+=b7272=q6d798bd-mrt-datacite.xml +26 -0
- data/spec/data/dash1-datacite-xml/ucsf-ark+=b7272=q6h12zxh-mrt-datacite.xml +46 -0
- data/spec/data/dash1-datacite-xml/ucsf-ark+=b7272=q6h41pb7-mrt-datacite.xml +60 -0
- data/spec/data/dash1-datacite-xml/ucsf-ark+=b7272=q6kw5cxv-mrt-datacite.xml +43 -0
- data/spec/data/dash1-datacite-xml/ucsf-ark+=b7272=q6ms3qnx-mrt-datacite.xml +42 -0
- data/spec/data/dash1-datacite-xml/ucsf-ark+=b7272=q6mw2f2n-mrt-datacite.xml +61 -0
- data/spec/data/dash1-datacite-xml/ucsf-ark+=b7272=q6pn93h6-mrt-datacite.xml +52 -0
- data/spec/data/dash1-datacite-xml/ucsf-ark+=b7272=q6qn64nk-mrt-datacite.xml +46 -0
- data/spec/data/dash1-datacite-xml/ucsf-ark+=b7272=q6rf5rzx-mrt-datacite.xml +60 -0
- data/spec/data/dash1-datacite-xml/ucsf-ark+=b7272=q6rn35sz-mrt-datacite.xml +63 -0
- data/spec/data/dash1-datacite-xml/ucsf-ark+=b7272=q6sf2t3q-mrt-datacite.xml +21 -0
- data/spec/data/dash1-datacite-xml/ucsf-ark+=b7272=q6td9v7j-mrt-datacite.xml +29 -0
- data/spec/data/dash1-datacite-xml/ucsf-ark+=b7272=q6w66hpn-mrt-datacite.xml +23 -0
- data/spec/data/dash1-datacite-xml/ucsf-ark+=b7272=q6x63jt1-mrt-datacite.xml +27 -0
- data/spec/data/dash1-datacite-xml/ucsf-ark+=b7272=q6z60kzd-mrt-datacite.xml +45 -0
- data/spec/data/metadata.xsd +380 -0
- data/spec/data/mrt-datacite.xml +61 -0
- data/spec/unit/datacite/mapping/date_spec.rb +23 -15
- data/spec/unit/datacite/mapping/nonvalidating/identifier_spec.rb +38 -0
- data/spec/unit/datacite/mapping/resource_spec.rb +69 -12
- metadata +267 -4
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<?xml version="1.0" encoding="utf-8"?><resource xmlns="http://datacite.org/schema/kernel-3" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://datacite.org/schema/kernel-3 http://schema.datacite.org/meta/kernel-3/metadata.xsd">
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<identifier identifierType="DOI"/>
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<creators>
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<creator><creatorName>Megan Laurance</creatorName></creator>
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</creators>
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<titles>
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<title>Re-analysis of microarray data from rapamycin resistant DLBCL cell lines </title>
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</titles>
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<publisher>University of California, San Francisco</publisher>
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<publicationYear>2014</publicationYear>
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<subjects>
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<subject>microarray</subject>
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<subject>rapamycin</subject>
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<subject>Diffuse Large B-Cell Lymphoma</subject>
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<subject>pathway analysis</subject>
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<subject>CD247</subject>
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</subjects>
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<contributors>
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<contributor contributorType="ResearchGroup"><contributorName>UCSF:CIND</contributorName></contributor>
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<contributor contributorType="ResearchGroup"><contributorName>UCSF</contributorName></contributor>
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</contributors>
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<resourceType resourceTypeGeneral="Dataset">Dataset</resourceType>
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<descriptions>
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<description descriptionType="Abstract">This dataset contains a re-analysis of the raw microarray data originally published by Petrich AM et al in 2012 (citation details are provided through the link to the GEO record). We were interested in re-analyzing the data because the list of differentially expressed genes that were identified when comparing rapamycin resistant DLBCL cell lines to rapamycin sensitive cell lines was not included in the original article or supplemental materials. We were interested in validating and expanding upon the findings from the original article by reevaluating the raw microarray data. Our reanalysis identified over 200 genes that were significantly differentially expressed between rapamycin resistant and sensitive cells. Importantly, our analysis highlighted a gene that was highly upregulated in rapamycin resistant cells, CD247, that was not the focus on the original publication, and is the target of a drug currently in clinical trials for refractory DLBCL. Our reanalysis also highlighted the role of SYK, a kinase upregulated in rapamycin resistant cell lines, that has a direct molecular relationship with CD247, and is a potential biomarker of drug response in DLBCL. </description>
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<description descriptionType="Methods">The methods used to generate the original microarray data are described in the GEO record where the data were originally published: http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE27255 We downloaded the raw Affymetrix data (CEL files) from GEO for renalysis. Statistical and quality analysis was performed using the data analysis pipeline in iReport (http://www.ingenuity.com/products/ireport) which utilizes packages such as RMA and Limma from Bioconductor, in the R programming language. A full description of the analysis packages used by this pipeline are included in the word document "GSE27255 stats and QC details" included in this DataShare record. Analysis of microarray data in iReport identified 229 differentially expressed genes (DEGs) with a p-value <0.05, fold change >1.5. These DEGs were then uploaded and analyzed in Ingenuity Pathway Analysis (www.ingenuity.com) for functional enrichment, pathway analysis, and drug target/biomarker analysis. Our novel findings with respect to the role of CD247 and SYK in rapamycin resistant DLBCL cell lines is depicted in the pathway image fine "Rap resist network with CD247" which is included in this DataShare record.</description>
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<description descriptionType="SeriesInformation">The original microarray data that was used for this reanalysis use case is described in the GEO record GSE27255.</description>
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<description descriptionType="SeriesInformation">http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE27255 </description>
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</resource>
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<?xml version="1.0" encoding="utf-8"?><resource xmlns="http://datacite.org/schema/kernel-3" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://datacite.org/schema/kernel-3 http://schema.datacite.org/meta/kernel-3/metadata.xsd">
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<identifier identifierType="DOI"/>
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<creators>
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<creator><creatorName>Robert Rodriguez</creatorName></creator>
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</creators>
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<titles>
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<title>NEXUS Chest CT</title>
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</titles>
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<publisher>University of California, San Francisco</publisher>
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<publicationYear>2015</publicationYear>
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<subjects>
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<subject>Chest CT</subject>
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<subject> trauma</subject>
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</subjects>
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<contributors>
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<contributor contributorType="ResearchGroup"><contributorName>UCSF</contributorName></contributor>
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</contributors>
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<resourceType resourceTypeGeneral="Dataset">Dataset</resourceType>
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<?xml version="1.0" encoding="utf-8"?><resource xmlns="http://datacite.org/schema/kernel-3" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://datacite.org/schema/kernel-3 http://schema.datacite.org/meta/kernel-3/metadata.xsd">
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<identifier identifierType="DOI"/>
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<creator><creatorName>McDaniel, Patricia A</creatorName></creator>
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<creator><creatorName>Malone, Ruth E</creatorName></creator>
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</creators>
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<titles>
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<title>Tobacco-free retailers project</title>
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</titles>
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<publisher>University of California, San Francisco</publisher>
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<publicationYear>2014</publicationYear>
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<subjects>
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<subject>tobacco</subject>
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<subject>tobacco control</subject>
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<subject>tobacco retailers</subject>
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<description descriptionType="Abstract">This dataset contains the transcripts of 15 focus groups conducted in California, New York state, and Ohio from 2009-2013 concerning retailers that had voluntarily discontinued tobacco sales. Transcripts are grouped by state: FG1-8 are the California groups, FG9-13 are the New York groups, and FG14-15 are the Ohio groups.</description>
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<description descriptionType="Methods">Focus groups with one moderator, and, in California, one note-taker who occasionally asked questions. All but one of the focus groups in California were conducted by the same person. All of the New York and Ohio focus groups were conducted by the same person.</description>
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<description descriptionType="SeriesInformation">McDaniel PA, Malone RE. Why California retailers stop selling tobacco products, and what their customers and employees think about it when they do: case studies. BMC Public Health. 2011 Nov 8;11(1):848. </description>
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<description descriptionType="SeriesInformation">McDaniel PA, Malone RE. “People over Profits”: Retailers Who Voluntarily Ended Tobacco Sales. PLoS ONE 2014 9(1): e85751. </description>
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<?xml version="1.0" encoding="utf-8"?><resource xmlns="http://datacite.org/schema/kernel-3" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://datacite.org/schema/kernel-3 http://schema.datacite.org/meta/kernel-3/metadata.xsd">
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<identifier identifierType="DOI">10.7272/Q6Z60KZD</identifier>
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<creators>
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<creator>
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<creatorName>Weiner, Michael W.</creatorName>
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<creator>
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<creatorName>Chui, Helena</creatorName>
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</creators>
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<titles>
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<title>SIVD (Subcortical Ischemic Vascular Dementia)</title>
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</titles>
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<publisher>University of California, San Francisco</publisher>
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<publicationYear>2013</publicationYear>
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<contributors>
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<contributor contributorType="ResearchGroup">
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<contributorName>UCSF Center for Imaging of Neurodegenerative Diseases</contributorName>
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<resourceType resourceTypeGeneral="Dataset">dataset</resourceType>
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<relatedIdentifiers>
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<relatedIdentifier relatedIdentifierType="PMID" relationType="References">11756602</relatedIdentifier>
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<relatedIdentifier relatedIdentifierType="PMID" relationType="References">10369354</relatedIdentifier>
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<relatedIdentifier relatedIdentifierType="PMID" relationType="References">10782769</relatedIdentifier>
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<relatedIdentifier relatedIdentifierType="PMID" relationType="References">11796772</relatedIdentifier>
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<relatedIdentifier relatedIdentifierType="PMID" relationType="References">12040300</relatedIdentifier>
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<relatedIdentifier relatedIdentifierType="PMID" relationType="References">12058091</relatedIdentifier>
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<description descriptionType="Abstract">The overall goal of this project was to determine the extent to which subcortical ischemia and infaraction, and Alzheimer's disease, contribute to dementia. This project aimed to provide a greater understanding of the pathogenesis of dementia in patients with SIVD and AD.</description>
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<description descriptionType="Methods">Data were acquired at several sites: ABS = Aging Brain San Francisco (SFVAMC), ABD = Aging Brain UC Davis, and ABL = Aging Brain Los Angeles (USC).</description>
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<!-- Revision history
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2010-08-26 Complete revision according to new common specification by the metadata work group after review. AJH, DTIC
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2010-11-17 Revised to current state of kernel review, FZ, TIB
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2011-01-17 Complete revsion after community review. FZ, TIB
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2011-03-17 Release of v2.1: added a namespace; mandatory properties got minLength; changes in the definitions of relationTypes
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IsDocumentedBy/Documents and isCompiledBy/Compiles; changes type of property "Date" from xs:date to xs:string. FZ, TIB
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2011-06-27 v2.2: namespace: kernel-2.2, additions to controlled lists "resourceType", "contributorType", "relatedIdentifierType", and "descriptionType". Removal of intermediate include-files.
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2013-05 v3.0: namespace: kernel-3.0; delete LastMetadataUpdate & MetadateVersionNumber; additions to controlled lists "contributorType", "dateType", "descriptionType", "relationType", "relatedIdentifierType" & "resourceType"; deletion of "StartDate" & "EndDate" from list "dateType" and "Film" from "resourceType"; allow arbitrary order of elements; allow optional wrapper elements to be empty; include xml:lang attribute for title, subject & description; include attribute schemeURI for nameIdentifier of creator, contributor & subject; added new attributes "relatedMetadataScheme", "schemeURI" & "schemeType" to relatedIdentifier; included new property "geoLocation"
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2014-08-20 v3.1: additions to controlled lists "relationType", contributorType" and "relatedIdentifierType"; introduction of new child element "affiliation" to "creator" and "contributor"-->
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<xs:schema xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns="http://datacite.org/schema/kernel-3" targetNamespace="http://datacite.org/schema/kernel-3" elementFormDefault="qualified" xml:lang="EN">
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Root element of a single record. This wrapper element is for XML implementation only and is not defined in the DataCite DOI standard.
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Note: This is the case for all wrapper elements within this schema!</xs:documentation>
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<xs:documentation>The main researchers involved working on the data, or the authors of the publication in priority order. May be a corporate/institutional or personal name.</xs:documentation>
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<xs:documentation>Year when the data is made publicly available. If an embargo period has been in effect, use the date when the embargo period ends.</xs:documentation>
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<xs:documentation>In the case of datasets, "publish" is understood to mean making the data available on a specific date to the community of researchers. If there is no standard publication year value, use the date that would be preferred from a citation perspective.</xs:documentation>
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<xs:documentation>YYYY,YYYY-MM-DD, YYYY-MM-DDThh:mm:ssTZD or any other format or level of granularity described in W3CDTF. Use RKMS-ISO8601 standard for depicting date ranges.</xs:documentation>
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<xs:documentation>Primary language of the resource. Allowed values are taken from IETF BCP 47, ISO 639-1 language codes.</xs:documentation>
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<xs:documentation>The type of a resource. You may enter an additional free text description.</xs:documentation>
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<xs:documentation>The format is open, but the preferred format is a single term of some detail so that a pair can be formed with the sub-property.</xs:documentation>
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<xs:documentation>An identifier or identifiers other than the primary Identifier applied to the resource being registered. This may be any alphanumeric string which is unique within its domain of issue. May be used for local identifiers. AlternateIdentifier should be used for another identifier of the same instance (same location, same file).</xs:documentation>
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+
<xs:sequence>
|
227
|
+
<xs:element name="relatedIdentifier" minOccurs="0" maxOccurs="unbounded">
|
228
|
+
<xs:annotation>
|
229
|
+
<xs:documentation>Identifiers of related resources. Use this property to indicate subsets of properties, as appropriate.</xs:documentation>
|
230
|
+
</xs:annotation>
|
231
|
+
<xs:complexType>
|
232
|
+
<xs:simpleContent>
|
233
|
+
<xs:extension base="xs:string">
|
234
|
+
<xs:attribute name="relatedIdentifierType" type="relatedIdentifierType" use="required"/>
|
235
|
+
<xs:attribute name="relationType" type="relationType" use="required"/>
|
236
|
+
<xs:attribute name="relatedMetadataScheme" use="optional"/>
|
237
|
+
<xs:attribute name="schemeURI" type="xs:anyURI" use="optional"/>
|
238
|
+
<xs:attribute name="schemeType" use="optional"/>
|
239
|
+
</xs:extension>
|
240
|
+
</xs:simpleContent>
|
241
|
+
</xs:complexType>
|
242
|
+
</xs:element>
|
243
|
+
</xs:sequence>
|
244
|
+
</xs:complexType>
|
245
|
+
</xs:element>
|
246
|
+
<xs:element name="sizes" minOccurs="0">
|
247
|
+
<xs:complexType>
|
248
|
+
<xs:sequence>
|
249
|
+
<xs:element name="size" type="xs:string" minOccurs="0" maxOccurs="unbounded">
|
250
|
+
<xs:annotation>
|
251
|
+
<xs:documentation>Unstructures size information about the resource.</xs:documentation>
|
252
|
+
</xs:annotation>
|
253
|
+
</xs:element>
|
254
|
+
</xs:sequence>
|
255
|
+
</xs:complexType>
|
256
|
+
</xs:element>
|
257
|
+
<xs:element name="formats" minOccurs="0">
|
258
|
+
<xs:complexType>
|
259
|
+
<xs:sequence>
|
260
|
+
<xs:element name="format" type="xs:string" minOccurs="0" maxOccurs="unbounded">
|
261
|
+
<xs:annotation>
|
262
|
+
<xs:documentation>Technical format of the resource.</xs:documentation>
|
263
|
+
<xs:documentation>Use file extension or MIME type where possible.</xs:documentation>
|
264
|
+
</xs:annotation>
|
265
|
+
</xs:element>
|
266
|
+
</xs:sequence>
|
267
|
+
</xs:complexType>
|
268
|
+
</xs:element>
|
269
|
+
<xs:element name="version" type="xs:string" minOccurs="0">
|
270
|
+
<xs:annotation>
|
271
|
+
<xs:documentation>Version number of the resource. If the primary resource has changed the version number increases.</xs:documentation>
|
272
|
+
<xs:documentation>Register a new identifier for a major version change. Individual stewards need to determine which are major vs. minor versions. May be used in conjunction with properties 11 and 12 (AlternateIdentifier and RelatedIdentifier) to indicate various information updates. May be used in conjunction with property 17 (Description) to indicate the nature and file/record range of version.</xs:documentation>
|
273
|
+
</xs:annotation>
|
274
|
+
</xs:element>
|
275
|
+
<xs:element name="rightsList" minOccurs="0">
|
276
|
+
<xs:complexType>
|
277
|
+
<xs:sequence>
|
278
|
+
<xs:element name="rights" minOccurs="0" maxOccurs="unbounded">
|
279
|
+
<xs:annotation>
|
280
|
+
<xs:documentation>Any rights information for this resource. Provide a rights management statement for the resource or reference a service providing such information. Include embargo information if applicable.
|
281
|
+
Use the complete title of a license and include version information if applicable.</xs:documentation>
|
282
|
+
</xs:annotation>
|
283
|
+
<xs:complexType>
|
284
|
+
<xs:simpleContent>
|
285
|
+
<xs:extension base="xs:string">
|
286
|
+
<xs:attribute name="rightsURI" type="xs:anyURI" use="optional"/>
|
287
|
+
</xs:extension>
|
288
|
+
</xs:simpleContent>
|
289
|
+
</xs:complexType>
|
290
|
+
</xs:element>
|
291
|
+
</xs:sequence>
|
292
|
+
</xs:complexType>
|
293
|
+
</xs:element>
|
294
|
+
<xs:element name="descriptions" minOccurs="0">
|
295
|
+
<xs:complexType>
|
296
|
+
<xs:sequence>
|
297
|
+
<xs:element name="description" minOccurs="0" maxOccurs="unbounded">
|
298
|
+
<xs:annotation>
|
299
|
+
<xs:documentation>All additional information that does not fit in any of the other categories. May be used for technical information. It is a best practice to supply a description.</xs:documentation>
|
300
|
+
</xs:annotation>
|
301
|
+
<xs:complexType mixed="true">
|
302
|
+
<xs:choice>
|
303
|
+
<xs:element name="br" minOccurs="0" maxOccurs="unbounded">
|
304
|
+
<xs:simpleType>
|
305
|
+
<xs:restriction base="xs:string">
|
306
|
+
<xs:length value="0"/>
|
307
|
+
</xs:restriction>
|
308
|
+
</xs:simpleType>
|
309
|
+
</xs:element>
|
310
|
+
</xs:choice>
|
311
|
+
<xs:attribute name="descriptionType" type="descriptionType" use="required"/>
|
312
|
+
<xs:attribute ref="xml:lang"/>
|
313
|
+
</xs:complexType>
|
314
|
+
</xs:element>
|
315
|
+
</xs:sequence>
|
316
|
+
</xs:complexType>
|
317
|
+
</xs:element>
|
318
|
+
<xs:element name="geoLocations" minOccurs="0">
|
319
|
+
<xs:complexType>
|
320
|
+
<xs:sequence>
|
321
|
+
<xs:element name="geoLocation" minOccurs="0" maxOccurs="unbounded">
|
322
|
+
<xs:annotation>
|
323
|
+
<xs:documentation>Spatial region or named place where the data was gathered or about which the data is focused.</xs:documentation>
|
324
|
+
<xs:documentation>A point contains a single latitude-longitude pair, separated by whitespace.</xs:documentation>
|
325
|
+
<xs:documentation>A box contains two white space separated latitude-longitude pairs, with each pair separated by whitespace. The first pair is the lower corner, the second is the upper corner.</xs:documentation>
|
326
|
+
</xs:annotation>
|
327
|
+
<xs:complexType>
|
328
|
+
<xs:sequence>
|
329
|
+
<xs:element name="geoLocationPoint" type="point" minOccurs="0"/>
|
330
|
+
<xs:element name="geoLocationBox" type="box" minOccurs="0"/>
|
331
|
+
<xs:element name="geoLocationPlace" minOccurs="0"/>
|
332
|
+
</xs:sequence>
|
333
|
+
</xs:complexType>
|
334
|
+
</xs:element>
|
335
|
+
</xs:sequence>
|
336
|
+
</xs:complexType>
|
337
|
+
</xs:element>
|
338
|
+
</xs:all>
|
339
|
+
</xs:complexType>
|
340
|
+
</xs:element>
|
341
|
+
<!-- TYPE DECLARATIONS -->
|
342
|
+
<!-- defines the value for a DOI: DOI must start with "10." -->
|
343
|
+
<xs:simpleType name="doiType">
|
344
|
+
<xs:restriction base="xs:token">
|
345
|
+
<xs:pattern value="10\..+/.+"/>
|
346
|
+
</xs:restriction>
|
347
|
+
</xs:simpleType>
|
348
|
+
<!-- defines value for mandatory fields -->
|
349
|
+
<xs:simpleType name="nonemptycontentStringType">
|
350
|
+
<xs:restriction base="xs:string">
|
351
|
+
<xs:minLength value="1"/>
|
352
|
+
</xs:restriction>
|
353
|
+
</xs:simpleType>
|
354
|
+
<xs:attributeGroup name="nameId">
|
355
|
+
<xs:attribute name="nameIdentifier" type="xs:string" use="optional"/>
|
356
|
+
<xs:attribute name="nameIdentifierScheme" type="xs:string" use="optional"/>
|
357
|
+
</xs:attributeGroup>
|
358
|
+
<!-- defines the value for a year -->
|
359
|
+
<xs:simpleType name="yearType">
|
360
|
+
<xs:restriction base="xs:token">
|
361
|
+
<xs:pattern value="[\d]{4}"/>
|
362
|
+
</xs:restriction>
|
363
|
+
<!-- definitions for geoLocation -->
|
364
|
+
</xs:simpleType>
|
365
|
+
<xs:simpleType name="point">
|
366
|
+
<xs:restriction base="listOfDoubles">
|
367
|
+
<xs:minLength value="2"/>
|
368
|
+
<xs:maxLength value="2"/>
|
369
|
+
</xs:restriction>
|
370
|
+
</xs:simpleType>
|
371
|
+
<xs:simpleType name="box">
|
372
|
+
<xs:restriction base="listOfDoubles">
|
373
|
+
<xs:minLength value="4"/>
|
374
|
+
<xs:maxLength value="4"/>
|
375
|
+
</xs:restriction>
|
376
|
+
</xs:simpleType>
|
377
|
+
<xs:simpleType name="listOfDoubles">
|
378
|
+
<xs:list itemType="xs:double"/>
|
379
|
+
</xs:simpleType>
|
380
|
+
</xs:schema>
|