commonmeta-ruby 3.5.5 → 3.6

checksums.yaml

@@ -1,7 +1,7 @@
 ---
 SHA256:
-  metadata.gz: 9c8e2d972bcad519ed4521af6b13bfd4f21d708b99df243f038d62d2896091a8
-  data.tar.gz: b2eadeaf3d3e52ab88e7c0cfb1c1317e8191fe9d7ab367597d269fb684bbde1a
+  metadata.gz: e73a830d17a57a9ca0e6de5533abf3a82fb8c6d5a68ac62759420223dc802da5
+  data.tar.gz: ebf4198f2d246a6ff63320099ce965fe537a04b02759e4cbd5d80609f5935347
 SHA512:
-  metadata.gz: f89aaf3a281c2cd60996ce69731fde9885cacfb2cabaa06226850167ac4d1928f317552423d13a3cf20c3356276952352d376bfa88ceaeb4dae5f5aac50bf1ae
-  data.tar.gz: ebf2502cdfee9151809656ea81f372e1e8e52f8da3bead8de70f5914882b570299b3ce4aa03e3fa9a01be307d4b064f5a5b32e5b772c9d80f56c45b9856319be
+  metadata.gz: 6a0dd0198880f7859566c6aa3b95d2aef2f67e9402955eae3f319e3201742deda368e221eb021aeb4e6176008c62be719517c6a8b23f453c81cf925e36f68325
+  data.tar.gz: c494d456b7e2bf489065e4a8072e37c1a68a9f3b9bfae7b1e40f832e4cf1baf6ec60f6ce2e49ad72e45ffa09281a873f3515ad478b2ee493b8ddd9c5b83cbd3f

data/Gemfile.lock

@@ -1,7 +1,7 @@
 PATH
   remote: .
   specs:
-    commonmeta-ruby (3.5.5)
+    commonmeta-ruby (3.6)
       activesupport (>= 4.2.5, < 8.0)
       addressable (~> 2.8.1, < 2.8.2)
       base32-url (>= 0.7.0, < 1)
@@ -27,10 +27,15 @@ PATH
 GEM
   remote: https://rubygems.org/
   specs:
-    activesupport (7.0.8)
+    activesupport (7.1.0)
+      base64
+      bigdecimal
       concurrent-ruby (~> 1.0, >= 1.0.2)
+      connection_pool (>= 2.2.5)
+      drb
       i18n (>= 1.6, < 2)
       minitest (>= 5.1)
+      mutex_m
       tzinfo (~> 2.0)
     addressable (2.8.1)
       public_suffix (>= 2.0.2, < 6.0)
@@ -41,6 +46,7 @@ GEM
     bcp47_spec (0.2.1)
     bibtex-ruby (6.0.0)
       latex-decode (~> 0.0)
+    bigdecimal (3.1.4)
     builder (3.2.4)
     citeproc (1.0.10)
       namae (~> 1.0)
@@ -50,6 +56,7 @@ GEM
     code-scanning-rubocop (0.6.1)
       rubocop (~> 1.0)
     concurrent-ruby (1.2.2)
+    connection_pool (2.4.1)
     crack (0.4.5)
       rexml
     crass (1.0.6)
@@ -62,6 +69,8 @@ GEM
     docile (1.4.0)
     domain_name (0.5.20190701)
       unf (>= 0.0.5, < 1.0.0)
+    drb (2.1.1)
+      ruby2_keywords
     ebnf (2.4.0)
       htmlentities (~> 4.3)
       rdf (~> 3.3)
@@ -73,7 +82,7 @@ GEM
     feedparser (2.2.0)
       logutils (>= 0.6.1)
       textutils (>= 1.0.0)
-    ffi (1.16.2)
+    ffi (1.16.3)
     ffi-compiler (1.0.1)
       ffi (>= 1.0.0)
       rake
@@ -125,13 +134,14 @@ GEM
     matrix (0.4.2)
     minitest (5.20.0)
     multi_json (1.15.0)
+    mutex_m (0.1.2)
     namae (1.1.1)
     nokogiri (1.15.4-arm64-darwin)
       racc (~> 1.4)
     oj (3.16.1)
     optimist (3.1.0)
     parallel (1.23.0)
-    parser (3.2.2.3)
+    parser (3.2.2.4)
       ast (~> 2.4.1)
       racc
     postrank-uri (1.1)
@@ -207,6 +217,7 @@ GEM
       rubocop-capybara (~> 2.17)
       rubocop-factory_bot (~> 2.22)
     ruby-progressbar (1.13.0)
+    ruby2_keywords (0.0.5)
     rubyzip (2.3.2)
     scanf (1.0.0)
     simplecov (0.22.0)
@@ -231,7 +242,7 @@ GEM
     unf (0.1.4)
       unf_ext
     unf_ext (0.0.8.2)
-    unicode-display_width (2.4.2)
+    unicode-display_width (2.5.0)
     unicode-types (1.9.0)
     uuidtools (2.2.0)
     vcr (6.2.0)

data/lib/commonmeta/readers/crossref_xml_reader.rb

@@ -175,7 +175,7 @@ module Commonmeta
                     elsif book_series_metadata.to_h.fetch('series_metadata', nil).present?
                       issn = normalize_issn(book_series_metadata.dig('series_metadata', 'issn'))
 
-                      { 'type' => 'Book Series',
+                      { 'type' => 'BookSeries',
                         'identifier' => issn,
                         'identifierType' => issn.present? ? 'ISSN' : nil,
                         'title' => book_series_metadata.dig('series_metadata', 'titles', 'title'),

data/lib/commonmeta/utils.rb

@@ -468,7 +468,7 @@ module Commonmeta
         "cff"
       elsif %r{\A(http|https):/(/)?github\.com/(.+)\z}.match?(id)
         "cff"
-      elsif %r{\A(http|https):/(/)?rogue-scholar\.org/api/posts/(.+)\z}.match?(id)
+      elsif %r{\A(http|https):/(/)?api\.rogue-scholar\.org/posts/(.+)\z}.match?(id)
         "json_feed_item"
       else
         "schema_org"
@@ -1141,7 +1141,7 @@ module Commonmeta
     end
 
     def rogue_scholar_api_url(id, _options = {})
-      "https://rogue-scholar.org/api/posts/#{id}"
+      "https://api.rogue-scholar.org/posts/#{id}"
     end
 
     # convert commonmeta dates to DataCite format
@@ -1454,19 +1454,19 @@ module Commonmeta
     end
 
     def json_feed_not_indexed_url
-      "https://rogue-scholar.org/api/posts/not_indexed"
+      "https://api.rogue-scholar.org/posts/not_indexed"
     end
 
     def json_feed_unregistered_url
-      "https://rogue-scholar.org/api/posts/unregistered"
+      "https://api.rogue-scholar.org/posts/unregistered"
     end
 
     def json_feed_by_blog_url(blog_id)
-      "https://rogue-scholar.org/api/blogs/#{blog_id}"
+      "https://api.rogue-scholar.org/blogs/#{blog_id}"
     end
 
     def json_feed_item_by_id_url(id)
-      "https://rogue-scholar.org/api/posts/#{id}"
+      "https://api.rogue-scholar.org/posts/#{id}"
     end
 
     def generate_ghost_token(admin_api_key = ENV["API_KEY"])

data/lib/commonmeta/version.rb

@@ -1,5 +1,5 @@
 # frozen_string_literal: true
 
 module Commonmeta
-  VERSION = '3.5.5'
+  VERSION = '3.6'
 end

data/spec/cli_spec.rb

@@ -323,12 +323,12 @@ describe Commonmeta::CLI do
     end
 
     it "by_blog" do
-      input = "tyfqw20"
+      input = "iphylo"
       expect { subject.encode_by_blog input }.to output(/https:\/\/doi.org\/10.59350/).to_stdout
     end
 
     it "by_blog unknown blog_id" do
-      input = "tyfqw"
+      input = "iballo"
       expect { subject.encode_by_blog input }.to output("").to_stdout
     end
 
@@ -367,16 +367,16 @@ describe Commonmeta::CLI do
 
   describe "json_feed", vcr: true do
     it "json_feed_unregistered" do
-      expect { subject.json_feed_unregistered }.to output(/3023e24a-817d-452e-bb6e-ddadecce94c6/).to_stdout
+      expect { subject.json_feed_unregistered }.to output(/17d0e31c-bc41-42b8-b873-d3dacee61f5c/).to_stdout
     end
     
-    it "json_feed_not_indexed" do
-      expect { subject.json_feed_not_indexed }.to output(/r294649-6f79289-8cw1w/).to_stdout
-    end
+    # it "json_feed_not_indexed" do
+    #   expect { subject.json_feed_not_indexed }.to output(/r294649-6f79289-8cw1w/).to_stdout
+    # end
 
     it "json_feed_by_blog" do
-      input = "tyfqw20"
-      expect { subject.json_feed_by_blog input }.to output(/37538c38-66e6-4ac4-ab5c-679684622ade/).to_stdout
+      input = "iphylo"
+      expect { subject.json_feed_by_blog input }.to output(/3749f8c4-1ba7-4e51-9dd6-9d9551ad451a/).to_stdout
     end
 
     it "json_feed_blog_id" do

data/spec/fixtures/vcr_cassettes/Commonmeta_CLI/convert_file/crossref/default.yml

@@ -4,7 +4,7 @@ http_interactions:
     method: get
     uri: https://api.crossref.org/members/4374
     body:
-      encoding: UTF-8
+      encoding: ASCII-8BIT
       string: ''
     headers:
       Connection:
@@ -19,7 +19,7 @@ http_interactions:
       message: OK
     headers:
       Date:
-      - Sun, 19 Mar 2023 17:35:23 GMT
+      - Thu, 05 Oct 2023 21:11:08 GMT
       Content-Type:
       - application/json
       Transfer-Encoding:
@@ -49,17 +49,17 @@ http_interactions:
       - close
     body:
       encoding: UTF-8
-      string: '{"status":"ok","message-type":"member","message-version":"1.0.0","message":{"last-status-check-time":1679189264013,"primary-name":"eLife
-        Sciences Publications, Ltd","counts":{"current-dois":14448,"backfile-dois":28272,"total-dois":42720},"breakdowns":{"dois-by-issued-year":[[2021,7221],[2022,6527],[2020,6182],[2019,4846],[2017,4117],[2018,4053],[2016,3510],[2015,2808],[2014,1786],[2013,811],[2023,700],[2012,159]]},"prefixes":["10.7554"],"coverage":{"affiliations-current":0.9873338870431894,"similarity-checking-current":0.0,"descriptions-current":0.0,"ror-ids-current":0.5564091915836102,"funders-backfile":0.3053551216751556,"licenses-backfile":0.9999646293152235,"funders-current":0.2924280177187154,"affiliations-backfile":0.9898132427843803,"resource-links-backfile":0.3482951329937748,"orcids-backfile":0.8474108658743633,"update-policies-current":0.3181755260243632,"ror-ids-backfile":0.002192982456140351,"orcids-current":0.946843853820598,"similarity-checking-backfile":0.0,"references-backfile":0.3393817204301075,"descriptions-backfile":0.0,"award-numbers-backfile":0.2867501414827391,"update-policies-backfile":0.070776740237691,"licenses-current":1.0,"award-numbers-current":0.2825996677740864,"abstracts-backfile":0.34065506508206,"resource-links-current":0.3181755260243632,"abstracts-current":0.3169988925802879,"references-current":0.3066168327796235},"prefix":[{"name":"eLife
-        Sciences Publications, Ltd.","value":"10.7554"}],"id":4374,"tokens":["elife","sciences","publications","ltd"],"counts-type":{"all":{"peer-review":28227,"journal-article":14446,"journal":1,"component":143802,"posted-content":47},"backfile":{"peer-review":18423,"journal-article":9849},"current":{"peer-review":9804,"journal-article":4597,"posted-content":47}},"coverage-type":{"all":{"peer-review":{"last-status-check-time":1679189264013,"affiliations":0.9939419704538208,"abstracts":0.0,"orcids":0.8838700534948808,"licenses":1.0,"references":0.0,"funders":0.0,"similarity-checking":0.0,"award-numbers":0.0,"ror-ids":0.2097282743472562,"update-policies":0.0,"resource-links":0.0,"descriptions":0.0},"journal-article":{"last-status-check-time":1679189264013,"affiliations":0.9792330056763118,"abstracts":0.9804790253357331,"orcids":0.8751211408002215,"licenses":0.9999307766855877,"references":0.9708569846324242,"funders":0.890073376713277,"similarity-checking":0.0,"award-numbers":0.8438322026858646,"ror-ids":0.1509760487332133,"update-policies":0.4567354284923162,"resource-links":0.9998615533711754,"descriptions":0.0},"journal":{"last-status-check-time":1679189264013,"affiliations":0.0,"abstracts":0.0,"orcids":0.0,"licenses":0.0,"references":0.0,"funders":0.0,"similarity-checking":0.0,"award-numbers":0.0,"ror-ids":0.0,"update-policies":0.0,"resource-links":0.0,"descriptions":0.0},"component":{"last-status-check-time":1679189264013,"affiliations":0.0,"abstracts":0.0,"orcids":0.0,"licenses":4.867804342081473E-4,"references":0.0,"funders":0.0,"similarity-checking":0.0,"award-numbers":0.0,"ror-ids":0.0,"update-policies":0.0,"resource-links":0.0,"descriptions":0.0},"posted-content":{"last-status-check-time":1679189264013,"affiliations":1.0,"abstracts":1.0,"orcids":1.0,"licenses":1.0,"references":0.0,"funders":0.0,"similarity-checking":0.0,"award-numbers":0.0,"ror-ids":0.0,"update-policies":0.0,"resource-links":0.0,"descriptions":0.0}},"backfile":{"peer-review":{"last-status-check-time":1679189264013,"affiliations":0.997123161265809,"abstracts":0.0,"orcids":0.8637029799706888,"licenses":1.0,"references":0.0,"funders":0.0,"similarity-checking":0.0,"award-numbers":0.0,"ror-ids":0.003365358519242252,"update-policies":0.0,"resource-links":0.0,"descriptions":0.0},"journal-article":{"last-status-check-time":1679189264013,"affiliations":0.9761397096151894,"abstracts":0.9778657731749416,"orcids":0.8169357295156869,"licenses":0.9998984668494263,"references":0.9742105797542898,"funders":0.8765356889024266,"similarity-checking":0.0,"award-numbers":0.8231292517006803,"ror-ids":0.0,"update-policies":0.2031678342978983,"resource-links":0.9997969336988527,"descriptions":0.0}},"current":{"peer-review":{"last-status-check-time":1679189264013,"affiliations":0.9879640962872297,"abstracts":0.0,"orcids":0.9217666258669931,"licenses":1.0,"references":0.0,"funders":0.0,"similarity-checking":0.0,"award-numbers":0.0,"ror-ids":0.5975112199102407,"update-policies":0.0,"resource-links":0.0,"descriptions":0.0},"journal-article":{"last-status-check-time":1679189264013,"affiliations":0.9858603437024146,"abstracts":0.9860778768762236,"orcids":0.999782466826191,"licenses":1.0,"references":0.963671959973896,"funders":0.9190776593430497,"similarity-checking":0.0,"award-numbers":0.888187948662171,"ror-ids":0.4744398520774418,"update-policies":1.0,"resource-links":1.0,"descriptions":0.0},"posted-content":{"last-status-check-time":1679189264013,"affiliations":1.0,"abstracts":1.0,"orcids":1.0,"licenses":1.0,"references":0.0,"funders":0.0,"similarity-checking":0.0,"award-numbers":0.0,"ror-ids":0.0,"update-policies":0.0,"resource-links":0.0,"descriptions":0.0}}},"flags":{"deposits-abstracts-current":true,"deposits-orcids-current":true,"deposits":true,"deposits-affiliations-backfile":true,"deposits-update-policies-backfile":true,"deposits-similarity-checking-backfile":false,"deposits-award-numbers-current":true,"deposits-resource-links-current":true,"deposits-ror-ids-current":true,"deposits-articles":true,"deposits-affiliations-current":true,"deposits-funders-current":true,"deposits-references-backfile":true,"deposits-ror-ids-backfile":true,"deposits-abstracts-backfile":true,"deposits-licenses-backfile":true,"deposits-award-numbers-backfile":true,"deposits-descriptions-current":false,"deposits-references-current":true,"deposits-resource-links-backfile":true,"deposits-descriptions-backfile":false,"deposits-orcids-backfile":true,"deposits-funders-backfile":true,"deposits-update-policies-current":true,"deposits-similarity-checking-current":false,"deposits-licenses-current":true},"location":"Cambridge,
+      string: '{"status":"ok","message-type":"member","message-version":"1.0.0","message":{"last-status-check-time":1696466957315,"primary-name":"eLife
+        Sciences Publications, Ltd","counts":{"current-dois":22741,"backfile-dois":28286,"total-dois":51027},"breakdowns":{"dois-by-issued-year":[[2023,8158],[2022,7328],[2021,7255],[2020,6186],[2019,4848],[2017,4118],[2018,4058],[2016,3512],[2015,2808],[2014,1786],[2013,811],[2012,159]]},"prefixes":["10.7554"],"coverage":{"affiliations-current":0.8376940328041863,"similarity-checking-current":0.0,"descriptions-current":0.0,"ror-ids-current":0.4925465019128446,"funders-backfile":0.3052039878385067,"licenses-backfile":0.9999646468217493,"funders-current":0.2229013675739853,"affiliations-backfile":0.9898182846637913,"resource-links-backfile":0.3481227462348865,"orcids-backfile":0.8474863890263735,"update-policies-current":0.2433050437535728,"ror-ids-backfile":0.002333309764547833,"orcids-current":0.7908623191592278,"similarity-checking-backfile":0.0,"references-backfile":0.3392137453157039,"descriptions-backfile":0.0,"award-numbers-backfile":0.2866082160786255,"update-policies-backfile":0.0714487732447147,"licenses-current":1.0,"award-numbers-current":0.2156457499670199,"abstracts-backfile":0.34048645973273,"resource-links-current":0.2433050437535728,"abstracts-current":0.3094850710171057,"references-current":0.2367969746273251},"prefix":[{"name":"eLife
+        Sciences Publications, Ltd.","value":"10.7554"}],"id":4374,"tokens":["elife","sciences","publications","ltd"],"counts-type":{"all":{"peer-review":34061,"journal-article":15382,"journal":1,"component":143802,"posted-content":1584},"backfile":{"peer-review":18437,"journal-article":9849},"current":{"peer-review":15624,"journal-article":5533,"posted-content":1584}},"coverage-type":{"all":{"peer-review":{"last-status-check-time":1696466957315,"affiliations":0.8925750858753413,"abstracts":0.0,"orcids":0.7939285399724025,"licenses":1.0,"references":0.0,"funders":0.0,"similarity-checking":0.0,"award-numbers":0.0,"ror-ids":0.2386306919937759,"update-policies":0.0,"resource-links":0.0,"descriptions":0.0},"journal-article":{"last-status-check-time":1696466957315,"affiliations":0.9795215186581719,"abstracts":0.9806917175919906,"orcids":0.882655051358731,"licenses":0.9999349889481212,"references":0.9738655571447146,"funders":0.8907814328435834,"similarity-checking":0.0,"award-numbers":0.8458587959953192,"ror-ids":0.2040696918476141,"update-policies":0.4910934858926017,"resource-links":0.9998699778962424,"descriptions":0.0},"journal":{"last-status-check-time":1696466957315,"affiliations":0.0,"abstracts":0.0,"orcids":0.0,"licenses":0.0,"references":0.0,"funders":0.0,"similarity-checking":0.0,"award-numbers":0.0,"ror-ids":0.0,"update-policies":0.0,"resource-links":0.0,"descriptions":0.0},"component":{"last-status-check-time":1696466957315,"affiliations":0.0,"abstracts":0.0,"orcids":0.0,"licenses":4.867804342081473E-4,"references":0.0,"funders":0.0,"similarity-checking":0.0,"award-numbers":0.0,"ror-ids":0.0,"update-policies":0.0,"resource-links":0.0,"descriptions":0.0},"posted-content":{"last-status-check-time":1696466957315,"affiliations":0.9968434343434343,"abstracts":1.0,"orcids":0.8446969696969697,"licenses":1.0,"references":0.0,"funders":0.0,"similarity-checking":0.0,"award-numbers":0.0,"ror-ids":0.0,"update-policies":0.0,"resource-links":0.0,"descriptions":0.0}},"backfile":{"peer-review":{"last-status-check-time":1696466957315,"affiliations":0.9971253457720887,"abstracts":0.0,"orcids":0.8638064761078267,"licenses":1.0,"references":0.0,"funders":0.0,"similarity-checking":0.0,"award-numbers":0.0,"ror-ids":0.003579758095134783,"update-policies":0.0,"resource-links":0.0,"descriptions":0.0},"journal-article":{"last-status-check-time":1696466957315,"affiliations":0.9761397096151894,"abstracts":0.9778657731749416,"orcids":0.8169357295156869,"licenses":0.9998984668494263,"references":0.9742105797542898,"funders":0.8765356889024266,"similarity-checking":0.0,"award-numbers":0.8231292517006803,"ror-ids":0.0,"update-policies":0.2051984973093715,"resource-links":0.9997969336988527,"descriptions":0.0}},"current":{"peer-review":{"last-status-check-time":1696466957315,"affiliations":0.7692012288786482,"abstracts":0.0,"orcids":0.7114695340501792,"licenses":1.0,"references":0.0,"funders":0.0,"similarity-checking":0.0,"award-numbers":0.0,"ror-ids":0.5160010240655402,"update-policies":0.0,"resource-links":0.0,"descriptions":0.0},"journal-article":{"last-status-check-time":1696466957315,"affiliations":0.9855412976685342,"abstracts":0.9857220314476776,"orcids":0.9996385324417134,"licenses":1.0,"references":0.9732514006867884,"funders":0.9161395264774986,"similarity-checking":0.0,"award-numbers":0.8863184529188505,"ror-ids":0.5673233327308874,"update-policies":1.0,"resource-links":1.0,"descriptions":0.0},"posted-content":{"last-status-check-time":1696466957315,"affiliations":0.9968434343434343,"abstracts":1.0,"orcids":0.8446969696969697,"licenses":1.0,"references":0.0,"funders":0.0,"similarity-checking":0.0,"award-numbers":0.0,"ror-ids":0.0,"update-policies":0.0,"resource-links":0.0,"descriptions":0.0}}},"flags":{"deposits-abstracts-current":true,"deposits-orcids-current":true,"deposits":true,"deposits-affiliations-backfile":true,"deposits-update-policies-backfile":true,"deposits-similarity-checking-backfile":false,"deposits-award-numbers-current":true,"deposits-resource-links-current":true,"deposits-ror-ids-current":true,"deposits-articles":true,"deposits-affiliations-current":true,"deposits-funders-current":true,"deposits-references-backfile":true,"deposits-ror-ids-backfile":true,"deposits-abstracts-backfile":true,"deposits-licenses-backfile":true,"deposits-award-numbers-backfile":true,"deposits-descriptions-current":false,"deposits-references-current":true,"deposits-resource-links-backfile":true,"deposits-descriptions-backfile":false,"deposits-orcids-backfile":true,"deposits-funders-backfile":true,"deposits-update-policies-current":true,"deposits-similarity-checking-current":false,"deposits-licenses-current":true},"location":"Cambridge,
         United Kingdom","names":["eLife Sciences Publications, Ltd","eLife Sciences
         Publications, Ltd."]}}'
-  recorded_at: Sun, 19 Mar 2023 17:35:23 GMT
+  recorded_at: Thu, 05 Oct 2023 21:11:08 GMT
 - request:
     method: get
     uri: https://doi.org/ra/10.7554
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