workbench 0.8.177__py3-none-any.whl → 0.8.227__py3-none-any.whl
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- workbench/__init__.py +1 -0
- workbench/algorithms/dataframe/__init__.py +1 -2
- workbench/algorithms/dataframe/compound_dataset_overlap.py +321 -0
- workbench/algorithms/dataframe/feature_space_proximity.py +168 -75
- workbench/algorithms/dataframe/fingerprint_proximity.py +422 -86
- workbench/algorithms/dataframe/projection_2d.py +44 -21
- workbench/algorithms/dataframe/proximity.py +259 -305
- workbench/algorithms/graph/light/proximity_graph.py +12 -11
- workbench/algorithms/models/cleanlab_model.py +382 -0
- workbench/algorithms/models/noise_model.py +388 -0
- workbench/algorithms/sql/column_stats.py +0 -1
- workbench/algorithms/sql/correlations.py +0 -1
- workbench/algorithms/sql/descriptive_stats.py +0 -1
- workbench/algorithms/sql/outliers.py +3 -3
- workbench/api/__init__.py +5 -1
- workbench/api/df_store.py +17 -108
- workbench/api/endpoint.py +14 -12
- workbench/api/feature_set.py +117 -11
- workbench/api/meta.py +0 -1
- workbench/api/meta_model.py +289 -0
- workbench/api/model.py +52 -21
- workbench/api/parameter_store.py +3 -52
- workbench/cached/cached_meta.py +0 -1
- workbench/cached/cached_model.py +49 -11
- workbench/core/artifacts/__init__.py +11 -2
- workbench/core/artifacts/artifact.py +5 -5
- workbench/core/artifacts/df_store_core.py +114 -0
- workbench/core/artifacts/endpoint_core.py +319 -204
- workbench/core/artifacts/feature_set_core.py +249 -45
- workbench/core/artifacts/model_core.py +135 -82
- workbench/core/artifacts/parameter_store_core.py +98 -0
- workbench/core/cloud_platform/cloud_meta.py +0 -1
- workbench/core/pipelines/pipeline_executor.py +1 -1
- workbench/core/transforms/features_to_model/features_to_model.py +60 -44
- workbench/core/transforms/model_to_endpoint/model_to_endpoint.py +43 -10
- workbench/core/transforms/pandas_transforms/pandas_to_features.py +38 -2
- workbench/core/views/training_view.py +113 -42
- workbench/core/views/view.py +53 -3
- workbench/core/views/view_utils.py +4 -4
- workbench/model_script_utils/model_script_utils.py +339 -0
- workbench/model_script_utils/pytorch_utils.py +405 -0
- workbench/model_script_utils/uq_harness.py +277 -0
- workbench/model_scripts/chemprop/chemprop.template +774 -0
- workbench/model_scripts/chemprop/generated_model_script.py +774 -0
- workbench/model_scripts/chemprop/model_script_utils.py +339 -0
- workbench/model_scripts/chemprop/requirements.txt +3 -0
- workbench/model_scripts/custom_models/chem_info/fingerprints.py +175 -0
- workbench/model_scripts/custom_models/chem_info/mol_descriptors.py +0 -1
- workbench/model_scripts/custom_models/chem_info/molecular_descriptors.py +0 -1
- workbench/model_scripts/custom_models/chem_info/morgan_fingerprints.py +1 -2
- workbench/model_scripts/custom_models/proximity/feature_space_proximity.py +194 -0
- workbench/model_scripts/custom_models/proximity/feature_space_proximity.template +8 -10
- workbench/model_scripts/custom_models/uq_models/bayesian_ridge.template +7 -8
- workbench/model_scripts/custom_models/uq_models/ensemble_xgb.template +20 -21
- workbench/model_scripts/custom_models/uq_models/feature_space_proximity.py +194 -0
- workbench/model_scripts/custom_models/uq_models/gaussian_process.template +5 -11
- workbench/model_scripts/custom_models/uq_models/ngboost.template +15 -16
- workbench/model_scripts/ensemble_xgb/ensemble_xgb.template +15 -17
- workbench/model_scripts/meta_model/generated_model_script.py +209 -0
- workbench/model_scripts/meta_model/meta_model.template +209 -0
- workbench/model_scripts/pytorch_model/generated_model_script.py +443 -499
- workbench/model_scripts/pytorch_model/model_script_utils.py +339 -0
- workbench/model_scripts/pytorch_model/pytorch.template +440 -496
- workbench/model_scripts/pytorch_model/pytorch_utils.py +405 -0
- workbench/model_scripts/pytorch_model/requirements.txt +1 -1
- workbench/model_scripts/pytorch_model/uq_harness.py +277 -0
- workbench/model_scripts/scikit_learn/generated_model_script.py +7 -12
- workbench/model_scripts/scikit_learn/scikit_learn.template +4 -9
- workbench/model_scripts/script_generation.py +15 -12
- workbench/model_scripts/uq_models/generated_model_script.py +248 -0
- workbench/model_scripts/xgb_model/generated_model_script.py +371 -403
- workbench/model_scripts/xgb_model/model_script_utils.py +339 -0
- workbench/model_scripts/xgb_model/uq_harness.py +277 -0
- workbench/model_scripts/xgb_model/xgb_model.template +367 -399
- workbench/repl/workbench_shell.py +18 -14
- workbench/resources/open_source_api.key +1 -1
- workbench/scripts/endpoint_test.py +162 -0
- workbench/scripts/lambda_test.py +73 -0
- workbench/scripts/meta_model_sim.py +35 -0
- workbench/scripts/ml_pipeline_sqs.py +122 -6
- workbench/scripts/training_test.py +85 -0
- workbench/themes/dark/custom.css +59 -0
- workbench/themes/dark/plotly.json +5 -5
- workbench/themes/light/custom.css +153 -40
- workbench/themes/light/plotly.json +9 -9
- workbench/themes/midnight_blue/custom.css +59 -0
- workbench/utils/aws_utils.py +0 -1
- workbench/utils/chem_utils/fingerprints.py +87 -46
- workbench/utils/chem_utils/mol_descriptors.py +0 -1
- workbench/utils/chem_utils/projections.py +16 -6
- workbench/utils/chem_utils/vis.py +25 -27
- workbench/utils/chemprop_utils.py +141 -0
- workbench/utils/config_manager.py +2 -6
- workbench/utils/endpoint_utils.py +5 -7
- workbench/utils/license_manager.py +2 -6
- workbench/utils/markdown_utils.py +57 -0
- workbench/utils/meta_model_simulator.py +499 -0
- workbench/utils/metrics_utils.py +256 -0
- workbench/utils/model_utils.py +260 -76
- workbench/utils/pipeline_utils.py +0 -1
- workbench/utils/plot_utils.py +159 -34
- workbench/utils/pytorch_utils.py +87 -0
- workbench/utils/shap_utils.py +11 -57
- workbench/utils/theme_manager.py +95 -30
- workbench/utils/xgboost_local_crossfold.py +267 -0
- workbench/utils/xgboost_model_utils.py +127 -220
- workbench/web_interface/components/experiments/outlier_plot.py +0 -1
- workbench/web_interface/components/model_plot.py +16 -2
- workbench/web_interface/components/plugin_unit_test.py +5 -3
- workbench/web_interface/components/plugins/ag_table.py +2 -4
- workbench/web_interface/components/plugins/confusion_matrix.py +3 -6
- workbench/web_interface/components/plugins/model_details.py +48 -80
- workbench/web_interface/components/plugins/scatter_plot.py +192 -92
- workbench/web_interface/components/settings_menu.py +184 -0
- workbench/web_interface/page_views/main_page.py +0 -1
- {workbench-0.8.177.dist-info → workbench-0.8.227.dist-info}/METADATA +31 -17
- {workbench-0.8.177.dist-info → workbench-0.8.227.dist-info}/RECORD +121 -106
- {workbench-0.8.177.dist-info → workbench-0.8.227.dist-info}/entry_points.txt +4 -0
- {workbench-0.8.177.dist-info → workbench-0.8.227.dist-info}/licenses/LICENSE +1 -1
- workbench/core/cloud_platform/aws/aws_df_store.py +0 -404
- workbench/core/cloud_platform/aws/aws_parameter_store.py +0 -280
- workbench/model_scripts/custom_models/meta_endpoints/example.py +0 -53
- workbench/model_scripts/custom_models/proximity/generated_model_script.py +0 -138
- workbench/model_scripts/custom_models/proximity/proximity.py +0 -384
- workbench/model_scripts/custom_models/uq_models/generated_model_script.py +0 -494
- workbench/model_scripts/custom_models/uq_models/mapie.template +0 -494
- workbench/model_scripts/custom_models/uq_models/meta_uq.template +0 -386
- workbench/model_scripts/custom_models/uq_models/proximity.py +0 -384
- workbench/model_scripts/ensemble_xgb/generated_model_script.py +0 -279
- workbench/model_scripts/quant_regression/quant_regression.template +0 -279
- workbench/model_scripts/quant_regression/requirements.txt +0 -1
- workbench/themes/quartz/base_css.url +0 -1
- workbench/themes/quartz/custom.css +0 -117
- workbench/themes/quartz/plotly.json +0 -642
- workbench/themes/quartz_dark/base_css.url +0 -1
- workbench/themes/quartz_dark/custom.css +0 -131
- workbench/themes/quartz_dark/plotly.json +0 -642
- workbench/utils/resource_utils.py +0 -39
- {workbench-0.8.177.dist-info → workbench-0.8.227.dist-info}/WHEEL +0 -0
- {workbench-0.8.177.dist-info → workbench-0.8.227.dist-info}/top_level.txt +0 -0
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"""SettingsMenu: A settings menu component for the Workbench Dashboard."""
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from dash import html, dcc
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import dash_bootstrap_components as dbc
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# Workbench Imports
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from workbench.utils.theme_manager import ThemeManager
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class SettingsMenu:
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"""A settings menu with admin links and theme selection."""
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def __init__(self):
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"""Initialize the SettingsMenu."""
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self.tm = ThemeManager()
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def create_component(self, component_id: str) -> html.Div:
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"""Create a settings menu dropdown component.
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Args:
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component_id (str): The ID prefix for the component.
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Returns:
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html.Div: A Div containing the settings menu dropdown.
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"""
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themes = self.tm.list_themes()
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# Create theme submenu items
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for theme in sorted(themes):
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theme_items.append(
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dbc.DropdownMenuItem(
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[
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html.Span(
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"",
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id={"type": f"{component_id}-checkmark", "theme": theme},
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style={
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"fontFamily": "monospace",
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"marginRight": "5px",
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"width": "20px",
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"display": "inline-block",
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},
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),
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theme.replace("_", " ").title(),
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],
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id={"type": f"{component_id}-theme-item", "theme": theme},
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)
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)
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# Hamburger icon (3 rounded lines)
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hamburger_icon = html.Div(
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[
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html.Div(
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style={
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"width": "20px",
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"height": "3px",
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"backgroundColor": "currentColor",
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"borderRadius": "2px",
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"marginBottom": "4px",
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}
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html.Div(
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style={
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"width": "20px",
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"height": "3px",
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"backgroundColor": "currentColor",
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"borderRadius": "2px",
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"marginBottom": "4px",
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}
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html.Div(
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style={"width": "20px", "height": "3px", "backgroundColor": "currentColor", "borderRadius": "2px"}
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),
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],
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style={"display": "flex", "flexDirection": "column", "alignItems": "center", "justifyContent": "center"},
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)
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# Build menu items: Status, License, divider, Themes submenu
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dbc.DropdownMenuItem("Status", href="/status", external_link=True, target="_blank"),
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dbc.DropdownMenuItem("License", href="/license", external_link=True, target="_blank"),
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dbc.DropdownMenuItem(divider=True),
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dbc.DropdownMenuItem("Themes", header=True),
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*theme_items,
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]
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return html.Div(
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[
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dbc.DropdownMenu(
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label=hamburger_icon,
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children=menu_items,
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id=f"{component_id}-dropdown",
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toggle_style={
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"background": "transparent",
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"border": "none",
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"boxShadow": "none",
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"padding": "5px 10px",
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},
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caret=False,
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align_end=True,
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),
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# Dummy store for the clientside callback output
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dcc.Store(id=f"{component_id}-dummy", data=None),
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# Store to trigger checkmark update on load
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dcc.Store(id=f"{component_id}-init", data=True),
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],
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id=component_id,
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)
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@staticmethod
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def get_clientside_callback_code(component_id: str) -> str:
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"""Get the JavaScript code for the theme selection clientside callback.
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str: JavaScript code for the clientside callback.
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"""
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return """
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function(n_clicks_list, ids) {
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// Find which button was clicked
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return window.dash_clientside.no_update;
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}
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// Find the clicked theme
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clickedTheme = ids[i].theme;
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break;
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}
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}
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if (clickedTheme) {
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// Store in localStorage
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localStorage.setItem('wb_theme', clickedTheme);
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// Set cookie for Flask to read on reload
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document.cookie = `wb_theme=${clickedTheme}; path=/; max-age=31536000`;
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// Reload the page to apply the new theme
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window.location.reload();
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return window.dash_clientside.no_update;
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}
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"""
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@staticmethod
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"""Get the JavaScript code to update checkmarks based on localStorage.
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str: JavaScript code for the checkmark update callback.
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"""
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return """
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function(init, ids) {
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currentTheme = value;
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break;
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// Return checkmarks for each theme
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return ids.map(id => id.theme === currentTheme ? '\u2713' : '');
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}
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"""
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if __name__ == "__main__":
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# Quick test to verify component creation
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menu = SettingsMenu()
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component = menu.create_component("test-settings-menu")
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print("SettingsMenu component created successfully")
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print(f"Available themes: {menu.tm.list_themes()}")
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print(f"Current theme: {menu.tm.current_theme()}")
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Metadata-Version: 2.4
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Name: workbench
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Version: 0.8.
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Version: 0.8.227
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Summary: Workbench: A Dashboard and Python API for creating and deploying AWS SageMaker Model Pipelines
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Author-email: SuperCowPowers LLC <support@supercowpowers.com>
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License
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License: MIT License
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Copyright (c) 2021-2026 SuperCowPowers LLC
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Permission is hereby granted, free of charge, to any person obtaining a copy
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of this software and associated documentation files (the "Software"), to deal
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in the Software without restriction, including without limitation the rights
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to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
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copies of the Software, and to permit persons to whom the Software is
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furnished to do so, subject to the following conditions:
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The above copyright notice and this permission notice shall be included in all
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copies or substantial portions of the Software.
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THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
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IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
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FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
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AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
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LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
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OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
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SOFTWARE.
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Project-URL: Homepage, https://github.com/SuperCowPowers/workbench
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Keywords: SageMaker,Machine Learning,AWS,Python,Utilities
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Classifier: Development Status :: 4 - Beta
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Classifier: Programming Language :: Python :: 3.10
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Classifier: Programming Language :: Python :: 3.11
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Classifier: Programming Language :: Python :: 3.12
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Classifier: Programming Language :: Python :: 3.13
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Classifier: Topic :: Scientific/Engineering
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Requires-Python: >=3.10
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Description-Content-Type: text/markdown
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Requires-Dist: numpy>=1.26.4
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Requires-Dist: pandas>=2.2.1
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Requires-Dist: awswrangler>=3.4.0
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Requires-Dist: sagemaker<3.0,>=2.143
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Requires-Dist: cryptography>=44.0.2
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Requires-Dist: ipython>=8.37.0
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Requires-Dist: requests>=2.26.0
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Requires-Dist: mordredcommunity>=2.0.6
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Requires-Dist: workbench-bridges>=0.1.
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Requires-Dist: workbench-bridges>=0.1.16
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Requires-Dist: cleanlab>=2.9.0
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