snowpark-connect 0.20.2__py3-none-any.whl
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- snowflake/snowpark_connect/__init__.py +23 -0
- snowflake/snowpark_connect/analyze_plan/__init__.py +3 -0
- snowflake/snowpark_connect/analyze_plan/map_tree_string.py +38 -0
- snowflake/snowpark_connect/column_name_handler.py +735 -0
- snowflake/snowpark_connect/config.py +576 -0
- snowflake/snowpark_connect/constants.py +47 -0
- snowflake/snowpark_connect/control_server.py +52 -0
- snowflake/snowpark_connect/dataframe_name_handler.py +54 -0
- snowflake/snowpark_connect/date_time_format_mapping.py +399 -0
- snowflake/snowpark_connect/empty_dataframe.py +18 -0
- snowflake/snowpark_connect/error/__init__.py +11 -0
- snowflake/snowpark_connect/error/error_mapping.py +6174 -0
- snowflake/snowpark_connect/error/error_utils.py +321 -0
- snowflake/snowpark_connect/error/exceptions.py +24 -0
- snowflake/snowpark_connect/execute_plan/__init__.py +3 -0
- snowflake/snowpark_connect/execute_plan/map_execution_command.py +204 -0
- snowflake/snowpark_connect/execute_plan/map_execution_root.py +173 -0
- snowflake/snowpark_connect/execute_plan/utils.py +183 -0
- snowflake/snowpark_connect/expression/__init__.py +3 -0
- snowflake/snowpark_connect/expression/literal.py +90 -0
- snowflake/snowpark_connect/expression/map_cast.py +343 -0
- snowflake/snowpark_connect/expression/map_expression.py +293 -0
- snowflake/snowpark_connect/expression/map_extension.py +104 -0
- snowflake/snowpark_connect/expression/map_sql_expression.py +633 -0
- snowflake/snowpark_connect/expression/map_udf.py +142 -0
- snowflake/snowpark_connect/expression/map_unresolved_attribute.py +241 -0
- snowflake/snowpark_connect/expression/map_unresolved_extract_value.py +85 -0
- snowflake/snowpark_connect/expression/map_unresolved_function.py +9450 -0
- snowflake/snowpark_connect/expression/map_unresolved_star.py +218 -0
- snowflake/snowpark_connect/expression/map_update_fields.py +164 -0
- snowflake/snowpark_connect/expression/map_window_function.py +258 -0
- snowflake/snowpark_connect/expression/typer.py +125 -0
- snowflake/snowpark_connect/includes/__init__.py +0 -0
- snowflake/snowpark_connect/includes/jars/antlr4-runtime-4.9.3.jar +0 -0
- snowflake/snowpark_connect/includes/jars/commons-cli-1.5.0.jar +0 -0
- snowflake/snowpark_connect/includes/jars/commons-codec-1.16.1.jar +0 -0
- snowflake/snowpark_connect/includes/jars/commons-collections-3.2.2.jar +0 -0
- snowflake/snowpark_connect/includes/jars/commons-collections4-4.4.jar +0 -0
- snowflake/snowpark_connect/includes/jars/commons-compiler-3.1.9.jar +0 -0
- snowflake/snowpark_connect/includes/jars/commons-compress-1.26.0.jar +0 -0
- snowflake/snowpark_connect/includes/jars/commons-crypto-1.1.0.jar +0 -0
- snowflake/snowpark_connect/includes/jars/commons-dbcp-1.4.jar +0 -0
- snowflake/snowpark_connect/includes/jars/commons-io-2.16.1.jar +0 -0
- snowflake/snowpark_connect/includes/jars/commons-lang-2.6.jar +0 -0
- snowflake/snowpark_connect/includes/jars/commons-lang3-3.12.0.jar +0 -0
- snowflake/snowpark_connect/includes/jars/commons-logging-1.1.3.jar +0 -0
- snowflake/snowpark_connect/includes/jars/commons-math3-3.6.1.jar +0 -0
- snowflake/snowpark_connect/includes/jars/commons-pool-1.5.4.jar +0 -0
- snowflake/snowpark_connect/includes/jars/commons-text-1.10.0.jar +0 -0
- snowflake/snowpark_connect/includes/jars/hadoop-client-api-3.3.4.jar +0 -0
- snowflake/snowpark_connect/includes/jars/jackson-annotations-2.15.2.jar +0 -0
- snowflake/snowpark_connect/includes/jars/jackson-core-2.15.2.jar +0 -0
- snowflake/snowpark_connect/includes/jars/jackson-core-asl-1.9.13.jar +0 -0
- snowflake/snowpark_connect/includes/jars/jackson-databind-2.15.2.jar +0 -0
- snowflake/snowpark_connect/includes/jars/jackson-dataformat-yaml-2.15.2.jar +0 -0
- snowflake/snowpark_connect/includes/jars/jackson-datatype-jsr310-2.15.2.jar +0 -0
- snowflake/snowpark_connect/includes/jars/jackson-mapper-asl-1.9.13.jar +0 -0
- snowflake/snowpark_connect/includes/jars/jackson-module-scala_2.12-2.15.2.jar +0 -0
- snowflake/snowpark_connect/includes/jars/json4s-ast_2.12-3.7.0-M11.jar +0 -0
- snowflake/snowpark_connect/includes/jars/json4s-core_2.12-3.7.0-M11.jar +0 -0
- snowflake/snowpark_connect/includes/jars/json4s-jackson_2.12-3.7.0-M11.jar +0 -0
- snowflake/snowpark_connect/includes/jars/json4s-scalap_2.12-3.7.0-M11.jar +0 -0
- snowflake/snowpark_connect/includes/jars/kryo-shaded-4.0.2.jar +0 -0
- snowflake/snowpark_connect/includes/jars/log4j-1.2-api-2.20.0.jar +0 -0
- snowflake/snowpark_connect/includes/jars/log4j-api-2.20.0.jar +0 -0
- snowflake/snowpark_connect/includes/jars/log4j-core-2.20.0.jar +0 -0
- snowflake/snowpark_connect/includes/jars/log4j-slf4j2-impl-2.20.0.jar +0 -0
- snowflake/snowpark_connect/includes/jars/paranamer-2.8.jar +0 -0
- snowflake/snowpark_connect/includes/jars/scala-collection-compat_2.12-2.7.0.jar +0 -0
- snowflake/snowpark_connect/includes/jars/scala-compiler-2.12.18.jar +0 -0
- snowflake/snowpark_connect/includes/jars/scala-library-2.12.18.jar +0 -0
- snowflake/snowpark_connect/includes/jars/scala-parser-combinators_2.12-2.3.0.jar +0 -0
- snowflake/snowpark_connect/includes/jars/scala-reflect-2.12.18.jar +0 -0
- snowflake/snowpark_connect/includes/jars/scala-xml_2.12-2.1.0.jar +0 -0
- snowflake/snowpark_connect/includes/jars/slf4j-api-2.0.7.jar +0 -0
- snowflake/snowpark_connect/includes/jars/spark-catalyst_2.12-3.5.6.jar +0 -0
- snowflake/snowpark_connect/includes/jars/spark-common-utils_2.12-3.5.6.jar +0 -0
- snowflake/snowpark_connect/includes/jars/spark-core_2.12-3.5.6.jar +0 -0
- snowflake/snowpark_connect/includes/jars/spark-graphx_2.12-3.5.6.jar +0 -0
- snowflake/snowpark_connect/includes/jars/spark-hive-thriftserver_2.12-3.5.6.jar +0 -0
- snowflake/snowpark_connect/includes/jars/spark-hive_2.12-3.5.6.jar +0 -0
- snowflake/snowpark_connect/includes/jars/spark-kubernetes_2.12-3.5.6.jar +0 -0
- snowflake/snowpark_connect/includes/jars/spark-kvstore_2.12-3.5.6.jar +0 -0
- snowflake/snowpark_connect/includes/jars/spark-launcher_2.12-3.5.6.jar +0 -0
- snowflake/snowpark_connect/includes/jars/spark-mesos_2.12-3.5.6.jar +0 -0
- snowflake/snowpark_connect/includes/jars/spark-mllib-local_2.12-3.5.6.jar +0 -0
- snowflake/snowpark_connect/includes/jars/spark-mllib_2.12-3.5.6.jar +0 -0
- snowflake/snowpark_connect/includes/jars/spark-network-common_2.12-3.5.6.jar +0 -0
- snowflake/snowpark_connect/includes/jars/spark-network-shuffle_2.12-3.5.6.jar +0 -0
- snowflake/snowpark_connect/includes/jars/spark-repl_2.12-3.5.6.jar +0 -0
- snowflake/snowpark_connect/includes/jars/spark-sketch_2.12-3.5.6.jar +0 -0
- snowflake/snowpark_connect/includes/jars/spark-sql-api_2.12-3.5.6.jar +0 -0
- snowflake/snowpark_connect/includes/jars/spark-sql_2.12-3.5.6.jar +0 -0
- snowflake/snowpark_connect/includes/jars/spark-streaming_2.12-3.5.6.jar +0 -0
- snowflake/snowpark_connect/includes/jars/spark-tags_2.12-3.5.6.jar +0 -0
- snowflake/snowpark_connect/includes/jars/spark-unsafe_2.12-3.5.6.jar +0 -0
- snowflake/snowpark_connect/includes/jars/spark-yarn_2.12-3.5.6.jar +0 -0
- snowflake/snowpark_connect/includes/python/__init__.py +21 -0
- snowflake/snowpark_connect/includes/python/pyspark/__init__.py +173 -0
- snowflake/snowpark_connect/includes/python/pyspark/_globals.py +71 -0
- snowflake/snowpark_connect/includes/python/pyspark/_typing.pyi +43 -0
- snowflake/snowpark_connect/includes/python/pyspark/accumulators.py +341 -0
- snowflake/snowpark_connect/includes/python/pyspark/broadcast.py +383 -0
- snowflake/snowpark_connect/includes/python/pyspark/cloudpickle/__init__.py +8 -0
- snowflake/snowpark_connect/includes/python/pyspark/cloudpickle/cloudpickle.py +948 -0
- snowflake/snowpark_connect/includes/python/pyspark/cloudpickle/cloudpickle_fast.py +844 -0
- snowflake/snowpark_connect/includes/python/pyspark/cloudpickle/compat.py +18 -0
- snowflake/snowpark_connect/includes/python/pyspark/conf.py +276 -0
- snowflake/snowpark_connect/includes/python/pyspark/context.py +2601 -0
- snowflake/snowpark_connect/includes/python/pyspark/daemon.py +218 -0
- snowflake/snowpark_connect/includes/python/pyspark/errors/__init__.py +70 -0
- snowflake/snowpark_connect/includes/python/pyspark/errors/error_classes.py +889 -0
- snowflake/snowpark_connect/includes/python/pyspark/errors/exceptions/__init__.py +16 -0
- snowflake/snowpark_connect/includes/python/pyspark/errors/exceptions/base.py +228 -0
- snowflake/snowpark_connect/includes/python/pyspark/errors/exceptions/captured.py +307 -0
- snowflake/snowpark_connect/includes/python/pyspark/errors/exceptions/connect.py +190 -0
- snowflake/snowpark_connect/includes/python/pyspark/errors/tests/__init__.py +16 -0
- snowflake/snowpark_connect/includes/python/pyspark/errors/tests/test_errors.py +60 -0
- snowflake/snowpark_connect/includes/python/pyspark/errors/utils.py +116 -0
- snowflake/snowpark_connect/includes/python/pyspark/files.py +165 -0
- snowflake/snowpark_connect/includes/python/pyspark/find_spark_home.py +95 -0
- snowflake/snowpark_connect/includes/python/pyspark/install.py +203 -0
- snowflake/snowpark_connect/includes/python/pyspark/instrumentation_utils.py +190 -0
- snowflake/snowpark_connect/includes/python/pyspark/java_gateway.py +248 -0
- snowflake/snowpark_connect/includes/python/pyspark/join.py +118 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/__init__.py +71 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/_typing.pyi +84 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/base.py +414 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/classification.py +4332 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/clustering.py +2188 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/common.py +146 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/connect/__init__.py +44 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/connect/base.py +346 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/connect/classification.py +382 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/connect/evaluation.py +291 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/connect/feature.py +258 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/connect/functions.py +77 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/connect/io_utils.py +335 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/connect/pipeline.py +262 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/connect/summarizer.py +120 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/connect/tuning.py +579 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/connect/util.py +173 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/deepspeed/__init__.py +16 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/deepspeed/deepspeed_distributor.py +165 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/deepspeed/tests/test_deepspeed_distributor.py +306 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/dl_util.py +150 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/evaluation.py +1166 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/feature.py +7474 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/fpm.py +543 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/functions.py +842 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/image.py +271 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/linalg/__init__.py +1382 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/model_cache.py +55 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/param/__init__.py +602 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/param/_shared_params_code_gen.py +368 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/param/shared.py +878 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/pipeline.py +451 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/recommendation.py +748 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/regression.py +3335 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/stat.py +523 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/tests/__init__.py +16 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/tests/connect/test_connect_classification.py +53 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/tests/connect/test_connect_evaluation.py +50 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/tests/connect/test_connect_feature.py +43 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/tests/connect/test_connect_function.py +114 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/tests/connect/test_connect_pipeline.py +47 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/tests/connect/test_connect_summarizer.py +43 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/tests/connect/test_connect_tuning.py +46 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/tests/connect/test_legacy_mode_classification.py +238 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/tests/connect/test_legacy_mode_evaluation.py +194 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/tests/connect/test_legacy_mode_feature.py +156 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/tests/connect/test_legacy_mode_pipeline.py +184 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/tests/connect/test_legacy_mode_summarizer.py +78 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/tests/connect/test_legacy_mode_tuning.py +292 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/tests/connect/test_parity_torch_data_loader.py +50 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/tests/connect/test_parity_torch_distributor.py +152 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/tests/test_algorithms.py +456 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/tests/test_base.py +96 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/tests/test_dl_util.py +186 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/tests/test_evaluation.py +77 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/tests/test_feature.py +401 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/tests/test_functions.py +528 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/tests/test_image.py +82 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/tests/test_linalg.py +409 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/tests/test_model_cache.py +55 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/tests/test_param.py +441 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/tests/test_persistence.py +546 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/tests/test_pipeline.py +71 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/tests/test_stat.py +52 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/tests/test_training_summary.py +494 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/tests/test_util.py +85 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/tests/test_wrapper.py +138 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/tests/tuning/__init__.py +16 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/tests/tuning/test_cv_io_basic.py +151 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/tests/tuning/test_cv_io_nested.py +97 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/tests/tuning/test_cv_io_pipeline.py +143 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/tests/tuning/test_tuning.py +551 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/tests/tuning/test_tvs_io_basic.py +137 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/tests/tuning/test_tvs_io_nested.py +96 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/tests/tuning/test_tvs_io_pipeline.py +142 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/torch/__init__.py +16 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/torch/data.py +100 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/torch/distributor.py +1133 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/torch/log_communication.py +198 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/torch/tests/__init__.py +16 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/torch/tests/test_data_loader.py +137 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/torch/tests/test_distributor.py +561 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/torch/tests/test_log_communication.py +172 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/torch/torch_run_process_wrapper.py +83 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/tree.py +434 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/tuning.py +1741 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/util.py +749 -0
- snowflake/snowpark_connect/includes/python/pyspark/ml/wrapper.py +465 -0
- snowflake/snowpark_connect/includes/python/pyspark/mllib/__init__.py +44 -0
- snowflake/snowpark_connect/includes/python/pyspark/mllib/_typing.pyi +33 -0
- snowflake/snowpark_connect/includes/python/pyspark/mllib/classification.py +989 -0
- snowflake/snowpark_connect/includes/python/pyspark/mllib/clustering.py +1318 -0
- snowflake/snowpark_connect/includes/python/pyspark/mllib/common.py +174 -0
- snowflake/snowpark_connect/includes/python/pyspark/mllib/evaluation.py +691 -0
- snowflake/snowpark_connect/includes/python/pyspark/mllib/feature.py +1085 -0
- snowflake/snowpark_connect/includes/python/pyspark/mllib/fpm.py +233 -0
- snowflake/snowpark_connect/includes/python/pyspark/mllib/linalg/__init__.py +1653 -0
- snowflake/snowpark_connect/includes/python/pyspark/mllib/linalg/distributed.py +1662 -0
- snowflake/snowpark_connect/includes/python/pyspark/mllib/random.py +698 -0
- snowflake/snowpark_connect/includes/python/pyspark/mllib/recommendation.py +389 -0
- snowflake/snowpark_connect/includes/python/pyspark/mllib/regression.py +1067 -0
- snowflake/snowpark_connect/includes/python/pyspark/mllib/stat/KernelDensity.py +59 -0
- snowflake/snowpark_connect/includes/python/pyspark/mllib/stat/__init__.py +34 -0
- snowflake/snowpark_connect/includes/python/pyspark/mllib/stat/_statistics.py +409 -0
- snowflake/snowpark_connect/includes/python/pyspark/mllib/stat/distribution.py +39 -0
- snowflake/snowpark_connect/includes/python/pyspark/mllib/stat/test.py +86 -0
- snowflake/snowpark_connect/includes/python/pyspark/mllib/tests/__init__.py +16 -0
- snowflake/snowpark_connect/includes/python/pyspark/mllib/tests/test_algorithms.py +353 -0
- snowflake/snowpark_connect/includes/python/pyspark/mllib/tests/test_feature.py +192 -0
- snowflake/snowpark_connect/includes/python/pyspark/mllib/tests/test_linalg.py +680 -0
- snowflake/snowpark_connect/includes/python/pyspark/mllib/tests/test_stat.py +206 -0
- snowflake/snowpark_connect/includes/python/pyspark/mllib/tests/test_streaming_algorithms.py +471 -0
- snowflake/snowpark_connect/includes/python/pyspark/mllib/tests/test_util.py +108 -0
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- snowpark_connect-0.20.2.dist-info/top_level.txt +1 -0
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from pyspark.mllib.regression import LabeledPoint
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26
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+
from pyspark.mllib.stat import Statistics
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27
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from pyspark.errors import IllegalArgumentException
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28
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from pyspark.testing.mllibutils import MLlibTestCase
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29
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+
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30
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31
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class StatTests(MLlibTestCase):
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32
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# SPARK-4023
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33
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def test_col_with_different_rdds(self):
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34
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# numpy
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35
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data = RandomRDDs.normalVectorRDD(self.sc, 1000, 10, 10)
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36
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summary = Statistics.colStats(data)
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37
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self.assertEqual(1000, summary.count())
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38
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# array
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39
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data = self.sc.parallelize([range(10)] * 10)
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40
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summary = Statistics.colStats(data)
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41
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self.assertEqual(10, summary.count())
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42
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# array
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43
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data = self.sc.parallelize([pyarray.array("d", range(10))] * 10)
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44
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summary = Statistics.colStats(data)
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45
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self.assertEqual(10, summary.count())
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46
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+
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47
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+
def test_col_norms(self):
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48
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data = RandomRDDs.normalVectorRDD(self.sc, 1000, 10, 10)
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49
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summary = Statistics.colStats(data)
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50
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self.assertEqual(10, len(summary.normL1()))
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51
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self.assertEqual(10, len(summary.normL2()))
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52
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+
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53
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data2 = self.sc.parallelize(range(10)).map(lambda x: Vectors.dense(x))
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summary2 = Statistics.colStats(data2)
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self.assertEqual(array([45.0]), summary2.normL1())
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56
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import math
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57
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+
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expectedNormL2 = math.sqrt(sum(map(lambda x: x * x, range(10))))
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59
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self.assertTrue(math.fabs(summary2.normL2()[0] - expectedNormL2) < 1e-14)
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60
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+
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61
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+
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62
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class ChiSqTestTests(MLlibTestCase):
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63
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def test_goodness_of_fit(self):
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64
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from numpy import inf
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65
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+
|
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66
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+
observed = Vectors.dense([4, 6, 5])
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67
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+
pearson = Statistics.chiSqTest(observed)
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68
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+
|
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69
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# Validated against the R command `chisq.test(c(4, 6, 5), p=c(1/3, 1/3, 1/3))`
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70
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self.assertEqual(pearson.statistic, 0.4)
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71
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+
self.assertEqual(pearson.degreesOfFreedom, 2)
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|
72
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+
self.assertAlmostEqual(pearson.pValue, 0.8187, 4)
|
|
73
|
+
|
|
74
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+
# Different expected and observed sum
|
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75
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+
observed1 = Vectors.dense([21, 38, 43, 80])
|
|
76
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+
expected1 = Vectors.dense([3, 5, 7, 20])
|
|
77
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+
pearson1 = Statistics.chiSqTest(observed1, expected1)
|
|
78
|
+
|
|
79
|
+
# Results validated against the R command
|
|
80
|
+
# `chisq.test(c(21, 38, 43, 80), p=c(3/35, 1/7, 1/5, 4/7))`
|
|
81
|
+
self.assertAlmostEqual(pearson1.statistic, 14.1429, 4)
|
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82
|
+
self.assertEqual(pearson1.degreesOfFreedom, 3)
|
|
83
|
+
self.assertAlmostEqual(pearson1.pValue, 0.002717, 4)
|
|
84
|
+
|
|
85
|
+
# Vectors with different sizes
|
|
86
|
+
observed3 = Vectors.dense([1.0, 2.0, 3.0])
|
|
87
|
+
expected3 = Vectors.dense([1.0, 2.0, 3.0, 4.0])
|
|
88
|
+
self.assertRaises(ValueError, Statistics.chiSqTest, observed3, expected3)
|
|
89
|
+
|
|
90
|
+
# Negative counts in observed
|
|
91
|
+
neg_obs = Vectors.dense([1.0, 2.0, 3.0, -4.0])
|
|
92
|
+
self.assertRaises(IllegalArgumentException, Statistics.chiSqTest, neg_obs, expected1)
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93
|
+
|
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94
|
+
# Count = 0.0 in expected but not observed
|
|
95
|
+
zero_expected = Vectors.dense([1.0, 0.0, 3.0])
|
|
96
|
+
pearson_inf = Statistics.chiSqTest(observed, zero_expected)
|
|
97
|
+
self.assertEqual(pearson_inf.statistic, inf)
|
|
98
|
+
self.assertEqual(pearson_inf.degreesOfFreedom, 2)
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|
99
|
+
self.assertEqual(pearson_inf.pValue, 0.0)
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|
100
|
+
|
|
101
|
+
# 0.0 in expected and observed simultaneously
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|
102
|
+
zero_observed = Vectors.dense([2.0, 0.0, 1.0])
|
|
103
|
+
self.assertRaises(
|
|
104
|
+
IllegalArgumentException, Statistics.chiSqTest, zero_observed, zero_expected
|
|
105
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+
)
|
|
106
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+
|
|
107
|
+
def test_matrix_independence(self):
|
|
108
|
+
data = [40.0, 24.0, 29.0, 56.0, 32.0, 42.0, 31.0, 10.0, 0.0, 30.0, 15.0, 12.0]
|
|
109
|
+
chi = Statistics.chiSqTest(Matrices.dense(3, 4, data))
|
|
110
|
+
|
|
111
|
+
# Results validated against R command
|
|
112
|
+
# `chisq.test(rbind(c(40, 56, 31, 30),c(24, 32, 10, 15), c(29, 42, 0, 12)))`
|
|
113
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+
self.assertAlmostEqual(chi.statistic, 21.9958, 4)
|
|
114
|
+
self.assertEqual(chi.degreesOfFreedom, 6)
|
|
115
|
+
self.assertAlmostEqual(chi.pValue, 0.001213, 4)
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116
|
+
|
|
117
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+
# Negative counts
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118
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+
neg_counts = Matrices.dense(2, 2, [4.0, 5.0, 3.0, -3.0])
|
|
119
|
+
self.assertRaises(IllegalArgumentException, Statistics.chiSqTest, neg_counts)
|
|
120
|
+
|
|
121
|
+
# Row sum = 0.0
|
|
122
|
+
row_zero = Matrices.dense(2, 2, [0.0, 1.0, 0.0, 2.0])
|
|
123
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+
self.assertRaises(IllegalArgumentException, Statistics.chiSqTest, row_zero)
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|
124
|
+
|
|
125
|
+
# Column sum = 0.0
|
|
126
|
+
col_zero = Matrices.dense(2, 2, [0.0, 0.0, 2.0, 2.0])
|
|
127
|
+
self.assertRaises(IllegalArgumentException, Statistics.chiSqTest, col_zero)
|
|
128
|
+
|
|
129
|
+
def test_chi_sq_pearson(self):
|
|
130
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+
data = [
|
|
131
|
+
LabeledPoint(0.0, Vectors.dense([0.5, 10.0])),
|
|
132
|
+
LabeledPoint(0.0, Vectors.dense([1.5, 20.0])),
|
|
133
|
+
LabeledPoint(1.0, Vectors.dense([1.5, 30.0])),
|
|
134
|
+
LabeledPoint(0.0, Vectors.dense([3.5, 30.0])),
|
|
135
|
+
LabeledPoint(0.0, Vectors.dense([3.5, 40.0])),
|
|
136
|
+
LabeledPoint(1.0, Vectors.dense([3.5, 40.0])),
|
|
137
|
+
]
|
|
138
|
+
|
|
139
|
+
for numParts in [2, 4, 6, 8]:
|
|
140
|
+
chi = Statistics.chiSqTest(self.sc.parallelize(data, numParts))
|
|
141
|
+
feature1 = chi[0]
|
|
142
|
+
self.assertEqual(feature1.statistic, 0.75)
|
|
143
|
+
self.assertEqual(feature1.degreesOfFreedom, 2)
|
|
144
|
+
self.assertAlmostEqual(feature1.pValue, 0.6873, 4)
|
|
145
|
+
|
|
146
|
+
feature2 = chi[1]
|
|
147
|
+
self.assertEqual(feature2.statistic, 1.5)
|
|
148
|
+
self.assertEqual(feature2.degreesOfFreedom, 3)
|
|
149
|
+
self.assertAlmostEqual(feature2.pValue, 0.6823, 4)
|
|
150
|
+
|
|
151
|
+
def test_right_number_of_results(self):
|
|
152
|
+
num_cols = 1001
|
|
153
|
+
sparse_data = [
|
|
154
|
+
LabeledPoint(0.0, Vectors.sparse(num_cols, [(100, 2.0)])),
|
|
155
|
+
LabeledPoint(0.1, Vectors.sparse(num_cols, [(200, 1.0)])),
|
|
156
|
+
]
|
|
157
|
+
chi = Statistics.chiSqTest(self.sc.parallelize(sparse_data))
|
|
158
|
+
self.assertEqual(len(chi), num_cols)
|
|
159
|
+
self.assertIsNotNone(chi[1000])
|
|
160
|
+
|
|
161
|
+
|
|
162
|
+
class KolmogorovSmirnovTest(MLlibTestCase):
|
|
163
|
+
def test_R_implementation_equivalence(self):
|
|
164
|
+
data = self.sc.parallelize(
|
|
165
|
+
[
|
|
166
|
+
1.1626852897838,
|
|
167
|
+
-0.585924465893051,
|
|
168
|
+
1.78546500331661,
|
|
169
|
+
-1.33259371048501,
|
|
170
|
+
-0.446566766553219,
|
|
171
|
+
0.569606122374976,
|
|
172
|
+
-2.88971761441412,
|
|
173
|
+
-0.869018343326555,
|
|
174
|
+
-0.461702683149641,
|
|
175
|
+
-0.555540910137444,
|
|
176
|
+
-0.0201353678515895,
|
|
177
|
+
-0.150382224136063,
|
|
178
|
+
-0.628126755843964,
|
|
179
|
+
1.32322085193283,
|
|
180
|
+
-1.52135057001199,
|
|
181
|
+
-0.437427868856691,
|
|
182
|
+
0.970577579543399,
|
|
183
|
+
0.0282226444247749,
|
|
184
|
+
-0.0857821886527593,
|
|
185
|
+
0.389214404984942,
|
|
186
|
+
]
|
|
187
|
+
)
|
|
188
|
+
model = Statistics.kolmogorovSmirnovTest(data, "norm")
|
|
189
|
+
self.assertAlmostEqual(model.statistic, 0.189, 3)
|
|
190
|
+
self.assertAlmostEqual(model.pValue, 0.422, 3)
|
|
191
|
+
|
|
192
|
+
model = Statistics.kolmogorovSmirnovTest(data, "norm", 0, 1)
|
|
193
|
+
self.assertAlmostEqual(model.statistic, 0.189, 3)
|
|
194
|
+
self.assertAlmostEqual(model.pValue, 0.422, 3)
|
|
195
|
+
|
|
196
|
+
|
|
197
|
+
if __name__ == "__main__":
|
|
198
|
+
from pyspark.mllib.tests.test_stat import * # noqa: F401
|
|
199
|
+
|
|
200
|
+
try:
|
|
201
|
+
import xmlrunner
|
|
202
|
+
|
|
203
|
+
testRunner = xmlrunner.XMLTestRunner(output="target/test-reports", verbosity=2)
|
|
204
|
+
except ImportError:
|
|
205
|
+
testRunner = None
|
|
206
|
+
unittest.main(testRunner=testRunner, verbosity=2)
|
|
@@ -0,0 +1,471 @@
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1
|
+
#
|
|
2
|
+
# Licensed to the Apache Software Foundation (ASF) under one or more
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|
3
|
+
# contributor license agreements. See the NOTICE file distributed with
|
|
4
|
+
# this work for additional information regarding copyright ownership.
|
|
5
|
+
# The ASF licenses this file to You under the Apache License, Version 2.0
|
|
6
|
+
# (the "License"); you may not use this file except in compliance with
|
|
7
|
+
# the License. You may obtain a copy of the License at
|
|
8
|
+
#
|
|
9
|
+
# http://www.apache.org/licenses/LICENSE-2.0
|
|
10
|
+
#
|
|
11
|
+
# Unless required by applicable law or agreed to in writing, software
|
|
12
|
+
# distributed under the License is distributed on an "AS IS" BASIS,
|
|
13
|
+
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
|
14
|
+
# See the License for the specific language governing permissions and
|
|
15
|
+
# limitations under the License.
|
|
16
|
+
#
|
|
17
|
+
|
|
18
|
+
import os
|
|
19
|
+
import unittest
|
|
20
|
+
|
|
21
|
+
from numpy import array, random, exp, dot, all, mean, abs
|
|
22
|
+
from numpy import sum as array_sum
|
|
23
|
+
|
|
24
|
+
from pyspark import SparkContext
|
|
25
|
+
from pyspark.mllib.clustering import StreamingKMeans, StreamingKMeansModel
|
|
26
|
+
from pyspark.mllib.classification import StreamingLogisticRegressionWithSGD
|
|
27
|
+
from pyspark.mllib.linalg import Vectors
|
|
28
|
+
from pyspark.mllib.regression import LabeledPoint, StreamingLinearRegressionWithSGD
|
|
29
|
+
from pyspark.mllib.util import LinearDataGenerator
|
|
30
|
+
from pyspark.streaming import StreamingContext
|
|
31
|
+
from pyspark.testing.utils import eventually
|
|
32
|
+
|
|
33
|
+
|
|
34
|
+
class MLLibStreamingTestCase(unittest.TestCase):
|
|
35
|
+
def setUp(self):
|
|
36
|
+
self.sc = SparkContext("local[4]", "MLlib tests")
|
|
37
|
+
self.ssc = StreamingContext(self.sc, 1.0)
|
|
38
|
+
|
|
39
|
+
def tearDown(self):
|
|
40
|
+
self.ssc.stop(False)
|
|
41
|
+
self.sc.stop()
|
|
42
|
+
|
|
43
|
+
|
|
44
|
+
class StreamingKMeansTest(MLLibStreamingTestCase):
|
|
45
|
+
def test_model_params(self):
|
|
46
|
+
"""Test that the model params are set correctly"""
|
|
47
|
+
stkm = StreamingKMeans()
|
|
48
|
+
stkm.setK(5).setDecayFactor(0.0)
|
|
49
|
+
self.assertEqual(stkm._k, 5)
|
|
50
|
+
self.assertEqual(stkm._decayFactor, 0.0)
|
|
51
|
+
|
|
52
|
+
# Model not set yet.
|
|
53
|
+
self.assertIsNone(stkm.latestModel())
|
|
54
|
+
self.assertRaises(ValueError, stkm.trainOn, [0.0, 1.0])
|
|
55
|
+
|
|
56
|
+
stkm.setInitialCenters(centers=[[0.0, 0.0], [1.0, 1.0]], weights=[1.0, 1.0])
|
|
57
|
+
self.assertEqual(stkm.latestModel().centers, [[0.0, 0.0], [1.0, 1.0]])
|
|
58
|
+
self.assertEqual(stkm.latestModel().clusterWeights, [1.0, 1.0])
|
|
59
|
+
|
|
60
|
+
def test_accuracy_for_single_center(self):
|
|
61
|
+
"""Test that parameters obtained are correct for a single center."""
|
|
62
|
+
centers, batches = self.streamingKMeansDataGenerator(
|
|
63
|
+
batches=5, numPoints=5, k=1, d=5, r=0.1, seed=0
|
|
64
|
+
)
|
|
65
|
+
stkm = StreamingKMeans(1)
|
|
66
|
+
stkm.setInitialCenters([[0.0, 0.0, 0.0, 0.0, 0.0]], [0.0])
|
|
67
|
+
input_stream = self.ssc.queueStream([self.sc.parallelize(batch, 1) for batch in batches])
|
|
68
|
+
stkm.trainOn(input_stream)
|
|
69
|
+
|
|
70
|
+
self.ssc.start()
|
|
71
|
+
|
|
72
|
+
def condition():
|
|
73
|
+
self.assertEqual(stkm.latestModel().clusterWeights, [25.0])
|
|
74
|
+
return True
|
|
75
|
+
|
|
76
|
+
eventually(condition, catch_assertions=True)
|
|
77
|
+
|
|
78
|
+
realCenters = array_sum(array(centers), axis=0)
|
|
79
|
+
for i in range(5):
|
|
80
|
+
modelCenters = stkm.latestModel().centers[0][i]
|
|
81
|
+
self.assertAlmostEqual(centers[0][i], modelCenters, 1)
|
|
82
|
+
self.assertAlmostEqual(realCenters[i], modelCenters, 1)
|
|
83
|
+
|
|
84
|
+
def streamingKMeansDataGenerator(self, batches, numPoints, k, d, r, seed, centers=None):
|
|
85
|
+
rng = random.RandomState(seed)
|
|
86
|
+
|
|
87
|
+
# Generate centers.
|
|
88
|
+
centers = [rng.randn(d) for i in range(k)]
|
|
89
|
+
|
|
90
|
+
return centers, [
|
|
91
|
+
[Vectors.dense(centers[j % k] + r * rng.randn(d)) for j in range(numPoints)]
|
|
92
|
+
for i in range(batches)
|
|
93
|
+
]
|
|
94
|
+
|
|
95
|
+
def test_trainOn_model(self):
|
|
96
|
+
"""Test the model on toy data with four clusters."""
|
|
97
|
+
stkm = StreamingKMeans()
|
|
98
|
+
initCenters = [[1.0, 1.0], [-1.0, 1.0], [-1.0, -1.0], [1.0, -1.0]]
|
|
99
|
+
stkm.setInitialCenters(centers=initCenters, weights=[1.0, 1.0, 1.0, 1.0])
|
|
100
|
+
|
|
101
|
+
# Create a toy dataset by setting a tiny offset for each point.
|
|
102
|
+
offsets = [[0, 0.1], [0, -0.1], [0.1, 0], [-0.1, 0]]
|
|
103
|
+
batches = []
|
|
104
|
+
for offset in offsets:
|
|
105
|
+
batches.append(
|
|
106
|
+
[[offset[0] + center[0], offset[1] + center[1]] for center in initCenters]
|
|
107
|
+
)
|
|
108
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+
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batches = [self.sc.parallelize(batch, 1) for batch in batches]
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input_stream = self.ssc.queueStream(batches)
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stkm.trainOn(input_stream)
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self.ssc.start()
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# Give enough time to train the model.
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def condition():
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finalModel = stkm.latestModel()
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self.assertTrue(all(finalModel.centers == array(initCenters)))
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self.assertEqual(finalModel.clusterWeights, [5.0, 5.0, 5.0, 5.0])
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return True
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eventually(condition, 90, catch_assertions=True)
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def test_predictOn_model(self):
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"""Test that the model predicts correctly on toy data."""
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stkm = StreamingKMeans()
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stkm._model = StreamingKMeansModel(
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clusterCenters=[[1.0, 1.0], [-1.0, 1.0], [-1.0, -1.0], [1.0, -1.0]],
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clusterWeights=[1.0, 1.0, 1.0, 1.0],
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)
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predict_data = [[[1.5, 1.5]], [[-1.5, 1.5]], [[-1.5, -1.5]], [[1.5, -1.5]]]
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predict_data = [self.sc.parallelize(batch, 1) for batch in predict_data]
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predict_stream = self.ssc.queueStream(predict_data)
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predict_val = stkm.predictOn(predict_stream)
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result = []
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def update(rdd):
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rdd_collect = rdd.collect()
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if rdd_collect:
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result.append(rdd_collect)
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predict_val.foreachRDD(update)
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self.ssc.start()
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+
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def condition():
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self.assertEqual(result, [[0], [1], [2], [3]])
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return True
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eventually(condition, catch_assertions=True)
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+
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@unittest.skip("SPARK-10086: Flaky StreamingKMeans test in PySpark")
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+
def test_trainOn_predictOn(self):
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"""Test that prediction happens on the updated model."""
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stkm = StreamingKMeans(decayFactor=0.0, k=2)
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stkm.setInitialCenters([[0.0], [1.0]], [1.0, 1.0])
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+
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# Since decay factor is set to zero, once the first batch
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# is passed the clusterCenters are updated to [-0.5, 0.7]
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# which causes 0.2 & 0.3 to be classified as 1, even though the
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+
# classification based in the initial model would have been 0
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# proving that the model is updated.
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batches = [[[-0.5], [0.6], [0.8]], [[0.2], [-0.1], [0.3]]]
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batches = [self.sc.parallelize(batch) for batch in batches]
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input_stream = self.ssc.queueStream(batches)
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+
predict_results = []
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+
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+
def collect(rdd):
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rdd_collect = rdd.collect()
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if rdd_collect:
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predict_results.append(rdd_collect)
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+
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+
stkm.trainOn(input_stream)
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predict_stream = stkm.predictOn(input_stream)
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+
predict_stream.foreachRDD(collect)
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+
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self.ssc.start()
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+
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+
def condition():
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+
self.assertEqual(predict_results, [[0, 1, 1], [1, 0, 1]])
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+
return True
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+
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|
+
eventually(condition, catch_assertions=True)
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+
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185
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+
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186
|
+
class StreamingLogisticRegressionWithSGDTests(MLLibStreamingTestCase):
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+
@staticmethod
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188
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+
def generateLogisticInput(offset, scale, nPoints, seed):
|
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+
"""
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190
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+
Generate 1 / (1 + exp(-x * scale + offset))
|
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+
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192
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+
where,
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+
x is randomly distributed and the threshold
|
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194
|
+
and labels for each sample in x is obtained from a random uniform
|
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+
distribution.
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|
+
"""
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|
+
rng = random.RandomState(seed)
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198
|
+
x = rng.randn(nPoints)
|
|
199
|
+
sigmoid = 1.0 / (1 + exp(-(dot(x, scale) + offset)))
|
|
200
|
+
y_p = rng.rand(nPoints)
|
|
201
|
+
cut_off = y_p <= sigmoid
|
|
202
|
+
y_p[cut_off] = 1.0
|
|
203
|
+
y_p[~cut_off] = 0.0
|
|
204
|
+
return [LabeledPoint(y_p[i], Vectors.dense([x[i]])) for i in range(nPoints)]
|
|
205
|
+
|
|
206
|
+
def test_parameter_accuracy(self):
|
|
207
|
+
"""
|
|
208
|
+
Test that the final value of weights is close to the desired value.
|
|
209
|
+
"""
|
|
210
|
+
input_batches = [
|
|
211
|
+
self.sc.parallelize(self.generateLogisticInput(0, 1.5, 100, 42 + i)) for i in range(20)
|
|
212
|
+
]
|
|
213
|
+
input_stream = self.ssc.queueStream(input_batches)
|
|
214
|
+
|
|
215
|
+
slr = StreamingLogisticRegressionWithSGD(stepSize=0.2, numIterations=25)
|
|
216
|
+
slr.setInitialWeights([0.0])
|
|
217
|
+
slr.trainOn(input_stream)
|
|
218
|
+
|
|
219
|
+
self.ssc.start()
|
|
220
|
+
|
|
221
|
+
def condition():
|
|
222
|
+
rel = (1.5 - slr.latestModel().weights.array[0]) / 1.5
|
|
223
|
+
self.assertAlmostEqual(rel, 0.1, 1)
|
|
224
|
+
return True
|
|
225
|
+
|
|
226
|
+
eventually(condition, timeout=120.0, catch_assertions=True)
|
|
227
|
+
|
|
228
|
+
def test_convergence(self):
|
|
229
|
+
"""
|
|
230
|
+
Test that weights converge to the required value on toy data.
|
|
231
|
+
"""
|
|
232
|
+
input_batches = [
|
|
233
|
+
self.sc.parallelize(self.generateLogisticInput(0, 1.5, 100, 42 + i)) for i in range(20)
|
|
234
|
+
]
|
|
235
|
+
input_stream = self.ssc.queueStream(input_batches)
|
|
236
|
+
models = []
|
|
237
|
+
|
|
238
|
+
slr = StreamingLogisticRegressionWithSGD(stepSize=0.2, numIterations=25)
|
|
239
|
+
slr.setInitialWeights([0.0])
|
|
240
|
+
slr.trainOn(input_stream)
|
|
241
|
+
input_stream.foreachRDD(lambda x: models.append(slr.latestModel().weights[0]))
|
|
242
|
+
|
|
243
|
+
self.ssc.start()
|
|
244
|
+
|
|
245
|
+
def condition():
|
|
246
|
+
self.assertEqual(len(models), len(input_batches))
|
|
247
|
+
return True
|
|
248
|
+
|
|
249
|
+
# We want all batches to finish for this test.
|
|
250
|
+
eventually(condition, 120, catch_assertions=True)
|
|
251
|
+
|
|
252
|
+
t_models = array(models)
|
|
253
|
+
diff = t_models[1:] - t_models[:-1]
|
|
254
|
+
# Test that weights improve with a small tolerance
|
|
255
|
+
self.assertTrue(all(diff >= -0.1))
|
|
256
|
+
self.assertTrue(array_sum(diff > 0) > 1)
|
|
257
|
+
|
|
258
|
+
@staticmethod
|
|
259
|
+
def calculate_accuracy_error(true, predicted):
|
|
260
|
+
return sum(abs(array(true) - array(predicted))) / len(true)
|
|
261
|
+
|
|
262
|
+
def test_predictions(self):
|
|
263
|
+
"""Test predicted values on a toy model."""
|
|
264
|
+
input_batches = []
|
|
265
|
+
for i in range(20):
|
|
266
|
+
batch = self.sc.parallelize(self.generateLogisticInput(0, 1.5, 100, 42 + i))
|
|
267
|
+
input_batches.append(batch.map(lambda x: (x.label, x.features)))
|
|
268
|
+
input_stream = self.ssc.queueStream(input_batches)
|
|
269
|
+
|
|
270
|
+
slr = StreamingLogisticRegressionWithSGD(stepSize=0.2, numIterations=25)
|
|
271
|
+
slr.setInitialWeights([1.5])
|
|
272
|
+
predict_stream = slr.predictOnValues(input_stream)
|
|
273
|
+
true_predicted = []
|
|
274
|
+
predict_stream.foreachRDD(lambda x: true_predicted.append(x.collect()))
|
|
275
|
+
self.ssc.start()
|
|
276
|
+
|
|
277
|
+
def condition():
|
|
278
|
+
self.assertEqual(len(true_predicted), len(input_batches))
|
|
279
|
+
return True
|
|
280
|
+
|
|
281
|
+
eventually(condition, catch_assertions=True)
|
|
282
|
+
|
|
283
|
+
# Test that the accuracy error is no more than 0.4 on each batch.
|
|
284
|
+
for batch in true_predicted:
|
|
285
|
+
true, predicted = zip(*batch)
|
|
286
|
+
self.assertTrue(self.calculate_accuracy_error(true, predicted) < 0.4)
|
|
287
|
+
|
|
288
|
+
@unittest.skipIf(
|
|
289
|
+
"COVERAGE_PROCESS_START" in os.environ, "Flaky with coverage enabled, skipping for now."
|
|
290
|
+
)
|
|
291
|
+
def test_training_and_prediction(self):
|
|
292
|
+
"""Test that the model improves on toy data with no. of batches"""
|
|
293
|
+
input_batches = [
|
|
294
|
+
self.sc.parallelize(self.generateLogisticInput(0, 1.5, 100, 42 + i)) for i in range(40)
|
|
295
|
+
]
|
|
296
|
+
predict_batches = [b.map(lambda lp: (lp.label, lp.features)) for b in input_batches]
|
|
297
|
+
|
|
298
|
+
slr = StreamingLogisticRegressionWithSGD(stepSize=0.01, numIterations=25)
|
|
299
|
+
slr.setInitialWeights([-0.1])
|
|
300
|
+
errors = []
|
|
301
|
+
|
|
302
|
+
def collect_errors(rdd):
|
|
303
|
+
true, predicted = zip(*rdd.collect())
|
|
304
|
+
errors.append(self.calculate_accuracy_error(true, predicted))
|
|
305
|
+
|
|
306
|
+
input_stream = self.ssc.queueStream(input_batches)
|
|
307
|
+
predict_stream = self.ssc.queueStream(predict_batches)
|
|
308
|
+
slr.trainOn(input_stream)
|
|
309
|
+
ps = slr.predictOnValues(predict_stream)
|
|
310
|
+
ps.foreachRDD(lambda x: collect_errors(x))
|
|
311
|
+
|
|
312
|
+
self.ssc.start()
|
|
313
|
+
|
|
314
|
+
def condition():
|
|
315
|
+
# Test that the improvement in error is > 0.3
|
|
316
|
+
if len(errors) == len(predict_batches):
|
|
317
|
+
self.assertGreater(errors[1] - errors[-1], 0.3)
|
|
318
|
+
if len(errors) >= 3 and errors[1] - errors[-1] > 0.3:
|
|
319
|
+
return True
|
|
320
|
+
return "Latest errors: " + ", ".join(map(lambda x: str(x), errors))
|
|
321
|
+
|
|
322
|
+
eventually(condition, timeout=180.0)
|
|
323
|
+
|
|
324
|
+
|
|
325
|
+
class StreamingLinearRegressionWithTests(MLLibStreamingTestCase):
|
|
326
|
+
def assertArrayAlmostEqual(self, array1, array2, dec):
|
|
327
|
+
for i, j in array1, array2:
|
|
328
|
+
self.assertAlmostEqual(i, j, dec)
|
|
329
|
+
|
|
330
|
+
def test_parameter_accuracy(self):
|
|
331
|
+
"""Test that coefs are predicted accurately by fitting on toy data."""
|
|
332
|
+
|
|
333
|
+
# Test that fitting (10*X1 + 10*X2), (X1, X2) gives coefficients
|
|
334
|
+
# (10, 10)
|
|
335
|
+
slr = StreamingLinearRegressionWithSGD(stepSize=0.2, numIterations=25)
|
|
336
|
+
slr.setInitialWeights([0.0, 0.0])
|
|
337
|
+
xMean = [0.0, 0.0]
|
|
338
|
+
xVariance = [1.0 / 3.0, 1.0 / 3.0]
|
|
339
|
+
|
|
340
|
+
# Create ten batches with 100 sample points in each.
|
|
341
|
+
batches = []
|
|
342
|
+
for i in range(10):
|
|
343
|
+
batch = LinearDataGenerator.generateLinearInput(
|
|
344
|
+
0.0, [10.0, 10.0], xMean, xVariance, 100, 42 + i, 0.1
|
|
345
|
+
)
|
|
346
|
+
batches.append(self.sc.parallelize(batch))
|
|
347
|
+
|
|
348
|
+
input_stream = self.ssc.queueStream(batches)
|
|
349
|
+
slr.trainOn(input_stream)
|
|
350
|
+
self.ssc.start()
|
|
351
|
+
|
|
352
|
+
def condition():
|
|
353
|
+
self.assertArrayAlmostEqual(slr.latestModel().weights.array, [10.0, 10.0], 1)
|
|
354
|
+
self.assertAlmostEqual(slr.latestModel().intercept, 0.0, 1)
|
|
355
|
+
return True
|
|
356
|
+
|
|
357
|
+
eventually(condition, catch_assertions=True)
|
|
358
|
+
|
|
359
|
+
def test_parameter_convergence(self):
|
|
360
|
+
"""Test that the model parameters improve with streaming data."""
|
|
361
|
+
slr = StreamingLinearRegressionWithSGD(stepSize=0.2, numIterations=25)
|
|
362
|
+
slr.setInitialWeights([0.0])
|
|
363
|
+
|
|
364
|
+
# Create ten batches with 100 sample points in each.
|
|
365
|
+
batches = []
|
|
366
|
+
for i in range(10):
|
|
367
|
+
batch = LinearDataGenerator.generateLinearInput(
|
|
368
|
+
0.0, [10.0], [0.0], [1.0 / 3.0], 100, 42 + i, 0.1
|
|
369
|
+
)
|
|
370
|
+
batches.append(self.sc.parallelize(batch))
|
|
371
|
+
|
|
372
|
+
model_weights = []
|
|
373
|
+
input_stream = self.ssc.queueStream(batches)
|
|
374
|
+
input_stream.foreachRDD(lambda x: model_weights.append(slr.latestModel().weights[0]))
|
|
375
|
+
slr.trainOn(input_stream)
|
|
376
|
+
self.ssc.start()
|
|
377
|
+
|
|
378
|
+
def condition():
|
|
379
|
+
self.assertEqual(len(model_weights), len(batches))
|
|
380
|
+
return True
|
|
381
|
+
|
|
382
|
+
# We want all batches to finish for this test.
|
|
383
|
+
eventually(condition, 90, catch_assertions=True)
|
|
384
|
+
|
|
385
|
+
w = array(model_weights)
|
|
386
|
+
diff = w[1:] - w[:-1]
|
|
387
|
+
self.assertTrue(all(diff >= -0.1))
|
|
388
|
+
|
|
389
|
+
def test_prediction(self):
|
|
390
|
+
"""Test prediction on a model with weights already set."""
|
|
391
|
+
# Create a model with initial Weights equal to coefs
|
|
392
|
+
slr = StreamingLinearRegressionWithSGD(stepSize=0.2, numIterations=25)
|
|
393
|
+
slr.setInitialWeights([10.0, 10.0])
|
|
394
|
+
|
|
395
|
+
# Create ten batches with 100 sample points in each.
|
|
396
|
+
batches = []
|
|
397
|
+
for i in range(10):
|
|
398
|
+
batch = LinearDataGenerator.generateLinearInput(
|
|
399
|
+
0.0, [10.0, 10.0], [0.0, 0.0], [1.0 / 3.0, 1.0 / 3.0], 100, 42 + i, 0.1
|
|
400
|
+
)
|
|
401
|
+
batches.append(self.sc.parallelize(batch).map(lambda lp: (lp.label, lp.features)))
|
|
402
|
+
|
|
403
|
+
input_stream = self.ssc.queueStream(batches)
|
|
404
|
+
output_stream = slr.predictOnValues(input_stream)
|
|
405
|
+
samples = []
|
|
406
|
+
output_stream.foreachRDD(lambda x: samples.append(x.collect()))
|
|
407
|
+
|
|
408
|
+
self.ssc.start()
|
|
409
|
+
|
|
410
|
+
def condition():
|
|
411
|
+
self.assertEqual(len(samples), len(batches))
|
|
412
|
+
return True
|
|
413
|
+
|
|
414
|
+
# We want all batches to finish for this test.
|
|
415
|
+
eventually(condition, catch_assertions=True)
|
|
416
|
+
|
|
417
|
+
# Test that mean absolute error on each batch is less than 0.1
|
|
418
|
+
for batch in samples:
|
|
419
|
+
true, predicted = zip(*batch)
|
|
420
|
+
self.assertTrue(mean(abs(array(true) - array(predicted))) < 0.1)
|
|
421
|
+
|
|
422
|
+
@unittest.skipIf(
|
|
423
|
+
"COVERAGE_PROCESS_START" in os.environ, "Flaky with coverage enabled, skipping for now."
|
|
424
|
+
)
|
|
425
|
+
def test_train_prediction(self):
|
|
426
|
+
"""Test that error on test data improves as model is trained."""
|
|
427
|
+
slr = StreamingLinearRegressionWithSGD(stepSize=0.2, numIterations=25)
|
|
428
|
+
slr.setInitialWeights([0.0])
|
|
429
|
+
|
|
430
|
+
# Create fifteen batches with 100 sample points in each.
|
|
431
|
+
batches = []
|
|
432
|
+
for i in range(15):
|
|
433
|
+
batch = LinearDataGenerator.generateLinearInput(
|
|
434
|
+
0.0, [10.0], [0.0], [1.0 / 3.0], 100, 42 + i, 0.1
|
|
435
|
+
)
|
|
436
|
+
batches.append(self.sc.parallelize(batch))
|
|
437
|
+
|
|
438
|
+
predict_batches = [b.map(lambda lp: (lp.label, lp.features)) for b in batches]
|
|
439
|
+
errors = []
|
|
440
|
+
|
|
441
|
+
def func(rdd):
|
|
442
|
+
true, predicted = zip(*rdd.collect())
|
|
443
|
+
errors.append(mean(abs(true) - abs(predicted)))
|
|
444
|
+
|
|
445
|
+
input_stream = self.ssc.queueStream(batches)
|
|
446
|
+
output_stream = self.ssc.queueStream(predict_batches)
|
|
447
|
+
slr.trainOn(input_stream)
|
|
448
|
+
output_stream = slr.predictOnValues(output_stream)
|
|
449
|
+
output_stream.foreachRDD(func)
|
|
450
|
+
self.ssc.start()
|
|
451
|
+
|
|
452
|
+
def condition():
|
|
453
|
+
if len(errors) == len(predict_batches):
|
|
454
|
+
self.assertGreater(errors[1] - errors[-1], 2)
|
|
455
|
+
if len(errors) >= 3 and errors[1] - errors[-1] > 2:
|
|
456
|
+
return True
|
|
457
|
+
return "Latest errors: " + ", ".join(map(lambda x: str(x), errors))
|
|
458
|
+
|
|
459
|
+
eventually(condition, timeout=180.0)
|
|
460
|
+
|
|
461
|
+
|
|
462
|
+
if __name__ == "__main__":
|
|
463
|
+
from pyspark.mllib.tests.test_streaming_algorithms import * # noqa: F401
|
|
464
|
+
|
|
465
|
+
try:
|
|
466
|
+
import xmlrunner
|
|
467
|
+
|
|
468
|
+
testRunner = xmlrunner.XMLTestRunner(output="target/test-reports", verbosity=2)
|
|
469
|
+
except ImportError:
|
|
470
|
+
testRunner = None
|
|
471
|
+
unittest.main(testRunner=testRunner, verbosity=2)
|