snappy 3.1.1__cp38-cp38-win_amd64.whl → 3.2__cp38-cp38-win_amd64.whl

snappy/dev/extended_ptolemy/phc_wrapper.py

@@ -41,9 +41,9 @@ def restore_forbidden(var_str):
 def ideal_to_file(ideal, filename):
     outfile = open(filename, 'w')
     polys = ideal.gens()
-    outfile.write('%d\n' % len(polys))
+    outfile.write(r'%d\n' % len(polys))
     for p in polys:
-        outfile.write('   ' + remove_forbidden(repr(p)) + ';\n')
+        outfile.write('   ' + remove_forbidden(repr(p)) + r';\n')
     outfile.close()
 
 def parse_file(filename, prec=53):
@@ -55,14 +55,14 @@ def parse_file(filename, prec=53):
     data = data.split('THE SOLUTIONS')[-1]
     data = re.subn('[*]{3,}', '', data)[0]
     ans = []
-    solutions = re.findall('(solution \d+ : \s* start residual .*?) ==', data, re.DOTALL)
+    solutions = re.findall(r'(solution \d+ : \s* start residual .*?) ==', data, re.DOTALL)
     for sol in solutions:
         kind = sol.split('=')[-1].strip()
         if kind == 'no solution':
             continue
-        mult = int(re.search('^m : (\d+)', sol, re.MULTILINE).group(1))
-        err = float(re.search('== err :\s+(.*?)\s+= ', sol).group(1))
-        coors = re.findall('^ (.*) :\s+(\S*)\s+(\S*)', sol, re.MULTILINE)
+        mult = int(re.search(r'^m : (\d+)', sol, re.MULTILINE).group(1))
+        err = float(re.search(r'== err :\s+(.*?)\s+= ', sol).group(1))
+        coors = re.findall(r'^ (.*) :\s+(\S*)\s+(\S*)', sol, re.MULTILINE)
         if kind.startswith('real'):
             coors = {restore_forbidden(var):RR(real) for var, real, imag in coors}
             ans.append({'kind':'real', 'mult':mult, 'err':err, 'coors':coors})
@@ -70,8 +70,8 @@ def parse_file(filename, prec=53):
             coors = {restore_forbidden(var):CC(RR(real), RR(imag)) for var, real, imag in coors}
             ans.append({'kind':'complex', 'mult':mult, 'err':err, 'coors':coors})
 
-    num_real = int(re.search('Number of real solutions\s+:\s(.*).', data).group(1))
-    num_complex = int(re.search('Number of complex solutions\s+:\s(.*).', data).group(1))
+    num_real = int(re.search(r'Number of real solutions\s+:\s(.*).', data).group(1))
+    num_complex = int(re.search(r'Number of complex solutions\s+:\s(.*).', data).group(1))
     kinds = [sol['kind'] for sol in ans]
     assert kinds.count('real') == num_real
     assert kinds.count('complex') == num_complex
@@ -185,9 +185,9 @@ def direct_hack(backend, ideal, **kwargs):
     polys = [repr(eqn) for eqn in ideal.gens()]
 
     data = {'backend':backend, 'vars':vars, 'polys':polys, 'kwargs':kwargs}
-    problem_data = json.dumps(data).encode('base64').replace('\n', '')
+    problem_data = json.dumps(data).encode('base64').replace(r'\n', '')
     ans_data = os.popen('sage -python ' + __file__ + ' ' + problem_data).read()
-    ans_data = re.sub('PHCv.*? released .*? works!\n', '',  ans_data)
+    ans_data = re.sub(r'PHCv.*? released .*? works!\n', '',  ans_data)
     if len(ans_data):
         ans = json.loads(ans_data)
         for sol in ans:

snappy/dev/vericlosed/oneVertexTruncatedComplex.py

@@ -5,7 +5,7 @@ from truncatedComplex import *
 class OneVertexTruncatedComplex(TruncatedComplex):
 
     def __init__(self, hyperbolic_structure):
-        super(OneVertexTruncatedComplex, self).__init__(
+        super().__init__(
             hyperbolic_structure.mcomplex)
 
         self.hyperbolic_structure = hyperbolic_structure

snappy/doc/_sources/additional_classes.rst.txt

@@ -1,40 +1,40 @@
-==================
-Additional Classes
-==================
-
-..   automodule:: snappy
-
-AbelianGroup
-============
-
-
-..   autoclass:: AbelianGroup
-     :members:
-     :inherited-members:
-     :exclude-members: coefficients
-
-FundamentalGroup
-================
-
-..   autoclass:: HolonomyGroup
-     :members:
-     :inherited-members:
-
-SymmetryGroup
-=============
-..   autoclass:: SymmetryGroup
-     :members:
-     :inherited-members:
-
-DirichletDomain
-===============
-..   autoclass:: DirichletDomain
-     :members:
-     :inherited-members:
-
-CuspNeighborhood
-================
-
-..   autoclass:: CuspNeighborhood
-     :members:
-     :inherited-members:
+==================
+Additional Classes
+==================
+
+..   automodule:: snappy
+
+AbelianGroup
+============
+
+
+..   autoclass:: AbelianGroup
+     :members:
+     :inherited-members:
+     :exclude-members: coefficients
+
+FundamentalGroup
+================
+
+..   autoclass:: HolonomyGroup
+     :members:
+     :inherited-members:
+
+SymmetryGroup
+=============
+..   autoclass:: SymmetryGroup
+     :members:
+     :inherited-members:
+
+DirichletDomain
+===============
+..   autoclass:: DirichletDomain
+     :members:
+     :inherited-members:
+
+CuspNeighborhood
+================
+
+..   autoclass:: CuspNeighborhood
+     :members:
+     :inherited-members:

snappy/doc/_sources/bugs.rst.txt

@@ -1,14 +1,14 @@
-.. Reporting bugs and other problems
-
-Reporting bugs and other problems
-=================================
-
-We very much welcome reports of any difficulties you encounter
-installing or using SnapPy. While we do significant testing before
-each release, with so many supported platforms/configurations and only
-three core developers, we need your help to keep things running
-smoothly. To report a problem, you may either `open a formal issue
-ticket <https://github.com/3-manifolds/SnapPy/issues>`_ or `write to the
-developers <snappy-help@computop.org>`_. As always, it is most helpful
-if you include the details of your computer's configuration as well as
-verbatim copies of any error messages.
+.. Reporting bugs and other problems
+
+Reporting bugs and other problems
+=================================
+
+We very much welcome reports of any difficulties you encounter
+installing or using SnapPy. While we do significant testing before
+each release, with so many supported platforms/configurations and only
+three core developers, we need your help to keep things running
+smoothly. To report a problem, you may either `open a formal issue
+ticket <https://github.com/3-manifolds/SnapPy/issues>`_ or `write to the
+developers <snappy-help@computop.org>`_. As always, it is most helpful
+if you include the details of your computer's configuration as well as
+verbatim copies of any error messages.

snappy/doc/_sources/censuses.rst.txt

@@ -1,51 +1,51 @@
-Census manifolds
-================
-
-Snappy comes with a large library of manifolds, which can be accessed
-individually through the Manifold and Triangulation constructors but
-can also be iterated through using the objects described on this
-page.
-
-SnapPy's iterators support several flexible methods for accessing
-manifolds.  They can be sliced (i.e. restricted to subranges) either
-by index or by volume.  Calling the iterator with keyword arguments
-such as num_tets=1, betti=2 or num_cusps=3 returns an iterator which
-is filtered by the specified conditions.  In addition these iterators
-can determine whether they contain a given manifold.  They support
-python's "A in B" syntax, and also provide an identify method which
-will return a copy of the census manifold which is isometric to the
-manifold passed as an argument.
-
-..   currentmodule:: snappy
-..   autodata:: OrientableCuspedCensus
-..   autodata:: OrientableClosedCensus
-..   autodata:: CensusKnots
-..   autodata:: LinkExteriors
-..   autodata:: HTLinkExteriors
-..   autodata:: NonorientableCuspedCensus
-..   autodata:: NonorientableClosedCensus
-
-There are also:
-
-.. toctree::
-   :maxdepth: 1
-
-   platonic_census
-
-As instances of subclasses of ManifoldTable, the objects above
-support the following methods.
-
-..   autoclass:: snappy.database.ManifoldTable
-     :members:
-     :inherited-members:
-
-Because of the large size of their datasets, the classes below
-can only iterate through slices by index, and do not provide
-the identification methods.
-
-..   autoclass:: AlternatingKnotExteriors
-     :members:
-     :inherited-members:
-..   autoclass:: NonalternatingKnotExteriors
-     :members: 
-     :inherited-members:
+Census manifolds
+================
+
+Snappy comes with a large library of manifolds, which can be accessed
+individually through the Manifold and Triangulation constructors but
+can also be iterated through using the objects described on this
+page.
+
+SnapPy's iterators support several flexible methods for accessing
+manifolds.  They can be sliced (i.e. restricted to subranges) either
+by index or by volume.  Calling the iterator with keyword arguments
+such as num_tets=1, betti=2 or num_cusps=3 returns an iterator which
+is filtered by the specified conditions.  In addition these iterators
+can determine whether they contain a given manifold.  They support
+python's "A in B" syntax, and also provide an identify method which
+will return a copy of the census manifold which is isometric to the
+manifold passed as an argument.
+
+..   currentmodule:: snappy
+..   autodata:: OrientableCuspedCensus
+..   autodata:: OrientableClosedCensus
+..   autodata:: CensusKnots
+..   autodata:: LinkExteriors
+..   autodata:: HTLinkExteriors
+..   autodata:: NonorientableCuspedCensus
+..   autodata:: NonorientableClosedCensus
+
+There are also:
+
+.. toctree::
+   :maxdepth: 1
+
+   platonic_census
+
+As instances of subclasses of ManifoldTable, the objects above
+support the following methods.
+
+..   autoclass:: snappy.database.ManifoldTable
+     :members:
+     :inherited-members:
+
+Because of the large size of their datasets, the classes below
+can only iterate through slices by index, and do not provide
+the identification methods.
+
+..   autoclass:: AlternatingKnotExteriors
+     :members:
+     :inherited-members:
+..   autoclass:: NonalternatingKnotExteriors
+     :members: 
+     :inherited-members:

snappy/doc/_sources/credits.rst.txt

@@ -1,75 +1,75 @@
-Credits
-=======
-
-Primary development and maintenance:
-
-* `Marc Culler <http://www.math.uic.edu/~culler>`_ 
-* `Nathan Dunfield <http://dunfield.info>`_
-* `Matthias Goerner <http://www.unhyperbolic.org/>`_
-* `Jeff Weeks <http://www.geometrygames.org>`_
-
-Additional contributions:
-
-* Mark Bell, Tracy Hall, Saul Schleimer, `Twister <https://github.com/MarkCBell/twister>`_.
-
-* Jim Hoste and Morwen Thistlethwaite, manifold and link censuses.
-
-* Ben Burton, manifold censuses and isosig code.  
-
-* Abhijit Champanerkar and Ilya Kofman, knot censuses.  
-
-* Robert Lipschitz and Jennet Dickinson, improvements to Spherogram.
-
-* Malik Obeidin, improvements to Spherogram and the manifold
-  databases.
-
-* Malik Obeidin and Cameron Rudd, exterior to link diagram code.
-
-* Jose Sanchez, 3D printing code.
-
-* Jean-Philippe Burelle, SL(2, C) character variety code.
-
-* David Bachman, Henry Segerman and Saul Schleimer, initial code the
-  raytraced inside view is based on.
-
-* Zoltán Szabó, computing Knot Floer homology.
-
-* `PARI library <http://pari.math.u-bordeaux.fr/>`_.  
-
-*  `QD quad-double library
-   <http://crd-legacy.lbl.gov/~dhbailey/mpdist/>`_.
-
-* Frédéric Chapoton, code cleanup and linting.
-
-* Others, please let Marc or Nathan know if we've forgotten you. 
-
-Citing SnapPy
--------------
-
-Please cite as: 
-
-M. Culler, N. M. Dunfield, M. Goerner, and J. R. Weeks, SnapPy, a computer program
-for studying the geometry and topology of 3-manifolds, http://snappy.computop.org  
-
-or in BibTeX format ::
-
-   @misc{SnapPy,
-        author={Culler, Marc and Dunfield, Nathan M. and Goerner,
-	Matthias and Weeks, Jeffrey R.},
-        title={Snap{P}y, a computer program for studying the geometry and topology of $3$-manifolds},
-        howpublished={Available at \url{http://snappy.computop.org} (DD/MM/YYYY)},
-   }
-
-or as an AMSRef::
-
-  \bib{SnapPy}{misc}{
-       author={Culler, Marc},
-       author={Dunfield, Nathan M.},
-       author={Goerner, Matthias},
-       author={Weeks, Jeffrey R.},
-       title={Snap{P}y, a computer program for studying the geometry and topology of $3$-manifolds},
-       note={Available at \url{http://snappy.computop.org} (DD/MM/YYYY)}
-  }
-
-where DD/MM/YYYY should be replaced by the date when you downloaded your
-copy of SnapPy.
+Credits
+=======
+
+Primary development and maintenance:
+
+* `Marc Culler <http://www.math.uic.edu/~culler>`_ 
+* `Nathan Dunfield <http://dunfield.info>`_
+* `Matthias Goerner <http://www.unhyperbolic.org/>`_
+* `Jeff Weeks <http://www.geometrygames.org>`_
+
+Additional contributions:
+
+* Mark Bell, Tracy Hall, Saul Schleimer, `Twister <https://github.com/MarkCBell/twister>`_.
+
+* Jim Hoste and Morwen Thistlethwaite, manifold and link censuses.
+
+* Ben Burton, manifold censuses and isosig code.  
+
+* Abhijit Champanerkar and Ilya Kofman, knot censuses.  
+
+* Robert Lipschitz and Jennet Dickinson, improvements to Spherogram.
+
+* Malik Obeidin, improvements to Spherogram and the manifold
+  databases.
+
+* Malik Obeidin and Cameron Rudd, exterior to link diagram code.
+
+* Jose Sanchez, 3D printing code.
+
+* Jean-Philippe Burelle, SL(2, C) character variety code.
+
+* David Bachman, Henry Segerman and Saul Schleimer, initial code the
+  raytraced inside view is based on.
+
+* Zoltán Szabó, computing Knot Floer homology.
+
+* `PARI library <http://pari.math.u-bordeaux.fr/>`_.  
+
+*  `QD quad-double library
+   <http://crd-legacy.lbl.gov/~dhbailey/mpdist/>`_.
+
+* Frédéric Chapoton, code cleanup and linting.
+
+* Others, please let Marc or Nathan know if we've forgotten you. 
+
+Citing SnapPy
+-------------
+
+Please cite as: 
+
+M. Culler, N. M. Dunfield, M. Goerner, and J. R. Weeks, SnapPy, a computer program
+for studying the geometry and topology of 3-manifolds, http://snappy.computop.org  
+
+or in BibTeX format ::
+
+   @misc{SnapPy,
+        author={Culler, Marc and Dunfield, Nathan M. and Goerner,
+	Matthias and Weeks, Jeffrey R.},
+        title={Snap{P}y, a computer program for studying the geometry and topology of $3$-manifolds},
+        howpublished={Available at \url{http://snappy.computop.org} (DD/MM/YYYY)},
+   }
+
+or as an AMSRef::
+
+  \bib{SnapPy}{misc}{
+       author={Culler, Marc},
+       author={Dunfield, Nathan M.},
+       author={Goerner, Matthias},
+       author={Weeks, Jeffrey R.},
+       title={Snap{P}y, a computer program for studying the geometry and topology of $3$-manifolds},
+       note={Available at \url{http://snappy.computop.org} (DD/MM/YYYY)}
+  }
+
+where DD/MM/YYYY should be replaced by the date when you downloaded your
+copy of SnapPy.