scitex 2.14.0__py3-none-any.whl → 2.15.2__py3-none-any.whl

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Files changed (300) hide show
  1. scitex/__init__.py +71 -17
  2. scitex/_env_loader.py +156 -0
  3. scitex/_mcp_resources/__init__.py +37 -0
  4. scitex/_mcp_resources/_cheatsheet.py +135 -0
  5. scitex/_mcp_resources/_figrecipe.py +138 -0
  6. scitex/_mcp_resources/_formats.py +102 -0
  7. scitex/_mcp_resources/_modules.py +337 -0
  8. scitex/_mcp_resources/_session.py +149 -0
  9. scitex/_mcp_tools/__init__.py +4 -0
  10. scitex/_mcp_tools/audio.py +66 -0
  11. scitex/_mcp_tools/diagram.py +11 -95
  12. scitex/_mcp_tools/introspect.py +210 -0
  13. scitex/_mcp_tools/plt.py +260 -305
  14. scitex/_mcp_tools/scholar.py +74 -0
  15. scitex/_mcp_tools/social.py +244 -0
  16. scitex/_mcp_tools/template.py +24 -0
  17. scitex/_mcp_tools/writer.py +21 -204
  18. scitex/ai/_gen_ai/_PARAMS.py +10 -7
  19. scitex/ai/classification/reporters/_SingleClassificationReporter.py +45 -1603
  20. scitex/ai/classification/reporters/_mixins/__init__.py +36 -0
  21. scitex/ai/classification/reporters/_mixins/_constants.py +67 -0
  22. scitex/ai/classification/reporters/_mixins/_cv_summary.py +387 -0
  23. scitex/ai/classification/reporters/_mixins/_feature_importance.py +119 -0
  24. scitex/ai/classification/reporters/_mixins/_metrics.py +275 -0
  25. scitex/ai/classification/reporters/_mixins/_plotting.py +179 -0
  26. scitex/ai/classification/reporters/_mixins/_reports.py +153 -0
  27. scitex/ai/classification/reporters/_mixins/_storage.py +160 -0
  28. scitex/ai/classification/timeseries/_TimeSeriesSlidingWindowSplit.py +30 -1550
  29. scitex/ai/classification/timeseries/_sliding_window_core.py +467 -0
  30. scitex/ai/classification/timeseries/_sliding_window_plotting.py +369 -0
  31. scitex/audio/README.md +40 -36
  32. scitex/audio/__init__.py +129 -61
  33. scitex/audio/_branding.py +185 -0
  34. scitex/audio/_mcp/__init__.py +32 -0
  35. scitex/audio/_mcp/handlers.py +59 -6
  36. scitex/audio/_mcp/speak_handlers.py +238 -0
  37. scitex/audio/_relay.py +225 -0
  38. scitex/audio/_tts.py +18 -10
  39. scitex/audio/engines/base.py +17 -10
  40. scitex/audio/engines/elevenlabs_engine.py +7 -2
  41. scitex/audio/mcp_server.py +228 -75
  42. scitex/canvas/README.md +1 -1
  43. scitex/canvas/editor/_dearpygui/__init__.py +25 -0
  44. scitex/canvas/editor/_dearpygui/_editor.py +147 -0
  45. scitex/canvas/editor/_dearpygui/_handlers.py +476 -0
  46. scitex/canvas/editor/_dearpygui/_panels/__init__.py +17 -0
  47. scitex/canvas/editor/_dearpygui/_panels/_control.py +119 -0
  48. scitex/canvas/editor/_dearpygui/_panels/_element_controls.py +190 -0
  49. scitex/canvas/editor/_dearpygui/_panels/_preview.py +43 -0
  50. scitex/canvas/editor/_dearpygui/_panels/_sections.py +390 -0
  51. scitex/canvas/editor/_dearpygui/_plotting.py +187 -0
  52. scitex/canvas/editor/_dearpygui/_rendering.py +504 -0
  53. scitex/canvas/editor/_dearpygui/_selection.py +295 -0
  54. scitex/canvas/editor/_dearpygui/_state.py +93 -0
  55. scitex/canvas/editor/_dearpygui/_utils.py +61 -0
  56. scitex/canvas/editor/flask_editor/_core/__init__.py +27 -0
  57. scitex/canvas/editor/flask_editor/_core/_bbox_extraction.py +200 -0
  58. scitex/canvas/editor/flask_editor/_core/_editor.py +173 -0
  59. scitex/canvas/editor/flask_editor/_core/_export_helpers.py +353 -0
  60. scitex/canvas/editor/flask_editor/_core/_routes_basic.py +190 -0
  61. scitex/canvas/editor/flask_editor/_core/_routes_export.py +332 -0
  62. scitex/canvas/editor/flask_editor/_core/_routes_panels.py +252 -0
  63. scitex/canvas/editor/flask_editor/_core/_routes_save.py +218 -0
  64. scitex/canvas/editor/flask_editor/_core.py +25 -1684
  65. scitex/canvas/editor/flask_editor/templates/__init__.py +32 -70
  66. scitex/cli/__init__.py +38 -43
  67. scitex/cli/audio.py +76 -27
  68. scitex/cli/capture.py +13 -20
  69. scitex/cli/introspect.py +481 -0
  70. scitex/cli/main.py +200 -109
  71. scitex/cli/mcp.py +60 -34
  72. scitex/cli/plt.py +357 -0
  73. scitex/cli/repro.py +15 -8
  74. scitex/cli/resource.py +15 -8
  75. scitex/cli/scholar/__init__.py +23 -8
  76. scitex/cli/scholar/_crossref_scitex.py +296 -0
  77. scitex/cli/scholar/_fetch.py +25 -3
  78. scitex/cli/social.py +314 -0
  79. scitex/cli/stats.py +15 -8
  80. scitex/cli/template.py +129 -12
  81. scitex/cli/tex.py +15 -8
  82. scitex/cli/writer.py +132 -8
  83. scitex/cloud/__init__.py +41 -2
  84. scitex/config/README.md +1 -1
  85. scitex/config/__init__.py +16 -2
  86. scitex/config/_env_registry.py +256 -0
  87. scitex/context/__init__.py +22 -0
  88. scitex/dev/__init__.py +20 -1
  89. scitex/diagram/__init__.py +42 -19
  90. scitex/diagram/mcp_server.py +13 -125
  91. scitex/gen/__init__.py +50 -14
  92. scitex/gen/_list_packages.py +4 -4
  93. scitex/introspect/__init__.py +82 -0
  94. scitex/introspect/_call_graph.py +303 -0
  95. scitex/introspect/_class_hierarchy.py +163 -0
  96. scitex/introspect/_core.py +41 -0
  97. scitex/introspect/_docstring.py +131 -0
  98. scitex/introspect/_examples.py +113 -0
  99. scitex/introspect/_imports.py +271 -0
  100. scitex/{gen/_inspect_module.py → introspect/_list_api.py} +43 -54
  101. scitex/introspect/_mcp/__init__.py +41 -0
  102. scitex/introspect/_mcp/handlers.py +233 -0
  103. scitex/introspect/_members.py +155 -0
  104. scitex/introspect/_resolve.py +89 -0
  105. scitex/introspect/_signature.py +131 -0
  106. scitex/introspect/_source.py +80 -0
  107. scitex/introspect/_type_hints.py +172 -0
  108. scitex/io/_save.py +1 -2
  109. scitex/io/bundle/README.md +1 -1
  110. scitex/logging/_formatters.py +19 -9
  111. scitex/mcp_server.py +98 -5
  112. scitex/os/__init__.py +4 -0
  113. scitex/{gen → os}/_check_host.py +4 -5
  114. scitex/plt/__init__.py +245 -550
  115. scitex/plt/_subplots/_AxisWrapperMixins/_SeabornMixin/_wrappers.py +5 -10
  116. scitex/plt/docs/EXTERNAL_PACKAGE_BRANDING.md +149 -0
  117. scitex/plt/gallery/README.md +1 -1
  118. scitex/plt/utils/_hitmap/__init__.py +82 -0
  119. scitex/plt/utils/_hitmap/_artist_extraction.py +343 -0
  120. scitex/plt/utils/_hitmap/_color_application.py +346 -0
  121. scitex/plt/utils/_hitmap/_color_conversion.py +121 -0
  122. scitex/plt/utils/_hitmap/_constants.py +40 -0
  123. scitex/plt/utils/_hitmap/_hitmap_core.py +334 -0
  124. scitex/plt/utils/_hitmap/_path_extraction.py +357 -0
  125. scitex/plt/utils/_hitmap/_query.py +113 -0
  126. scitex/plt/utils/_hitmap.py +46 -1616
  127. scitex/plt/utils/_metadata/__init__.py +80 -0
  128. scitex/plt/utils/_metadata/_artists/__init__.py +25 -0
  129. scitex/plt/utils/_metadata/_artists/_base.py +195 -0
  130. scitex/plt/utils/_metadata/_artists/_collections.py +356 -0
  131. scitex/plt/utils/_metadata/_artists/_extract.py +57 -0
  132. scitex/plt/utils/_metadata/_artists/_images.py +80 -0
  133. scitex/plt/utils/_metadata/_artists/_lines.py +261 -0
  134. scitex/plt/utils/_metadata/_artists/_patches.py +247 -0
  135. scitex/plt/utils/_metadata/_artists/_text.py +106 -0
  136. scitex/plt/utils/_metadata/_csv.py +416 -0
  137. scitex/plt/utils/_metadata/_detect.py +225 -0
  138. scitex/plt/utils/_metadata/_legend.py +127 -0
  139. scitex/plt/utils/_metadata/_rounding.py +117 -0
  140. scitex/plt/utils/_metadata/_verification.py +202 -0
  141. scitex/schema/README.md +1 -1
  142. scitex/scholar/__init__.py +8 -0
  143. scitex/scholar/_mcp/crossref_handlers.py +265 -0
  144. scitex/scholar/core/Scholar.py +63 -1700
  145. scitex/scholar/core/_mixins/__init__.py +36 -0
  146. scitex/scholar/core/_mixins/_enrichers.py +270 -0
  147. scitex/scholar/core/_mixins/_library_handlers.py +100 -0
  148. scitex/scholar/core/_mixins/_loaders.py +103 -0
  149. scitex/scholar/core/_mixins/_pdf_download.py +375 -0
  150. scitex/scholar/core/_mixins/_pipeline.py +312 -0
  151. scitex/scholar/core/_mixins/_project_handlers.py +125 -0
  152. scitex/scholar/core/_mixins/_savers.py +69 -0
  153. scitex/scholar/core/_mixins/_search.py +103 -0
  154. scitex/scholar/core/_mixins/_services.py +88 -0
  155. scitex/scholar/core/_mixins/_url_finding.py +105 -0
  156. scitex/scholar/crossref_scitex.py +367 -0
  157. scitex/scholar/docs/EXTERNAL_PACKAGE_BRANDING.md +149 -0
  158. scitex/scholar/examples/00_run_all.sh +120 -0
  159. scitex/scholar/jobs/_executors.py +27 -3
  160. scitex/scholar/pdf_download/ScholarPDFDownloader.py +38 -416
  161. scitex/scholar/pdf_download/_cli.py +154 -0
  162. scitex/scholar/pdf_download/strategies/__init__.py +11 -8
  163. scitex/scholar/pdf_download/strategies/manual_download_fallback.py +80 -3
  164. scitex/scholar/pipelines/ScholarPipelineBibTeX.py +73 -121
  165. scitex/scholar/pipelines/ScholarPipelineParallel.py +80 -138
  166. scitex/scholar/pipelines/ScholarPipelineSingle.py +43 -63
  167. scitex/scholar/pipelines/_single_steps.py +71 -36
  168. scitex/scholar/storage/_LibraryManager.py +97 -1695
  169. scitex/scholar/storage/_mixins/__init__.py +30 -0
  170. scitex/scholar/storage/_mixins/_bibtex_handlers.py +128 -0
  171. scitex/scholar/storage/_mixins/_library_operations.py +218 -0
  172. scitex/scholar/storage/_mixins/_metadata_conversion.py +226 -0
  173. scitex/scholar/storage/_mixins/_paper_saving.py +456 -0
  174. scitex/scholar/storage/_mixins/_resolution.py +376 -0
  175. scitex/scholar/storage/_mixins/_storage_helpers.py +121 -0
  176. scitex/scholar/storage/_mixins/_symlink_handlers.py +226 -0
  177. scitex/scholar/url_finder/.tmp/open_url/KNOWN_RESOLVERS.py +462 -0
  178. scitex/scholar/url_finder/.tmp/open_url/README.md +223 -0
  179. scitex/scholar/url_finder/.tmp/open_url/_DOIToURLResolver.py +694 -0
  180. scitex/scholar/url_finder/.tmp/open_url/_OpenURLResolver.py +1160 -0
  181. scitex/scholar/url_finder/.tmp/open_url/_ResolverLinkFinder.py +344 -0
  182. scitex/scholar/url_finder/.tmp/open_url/__init__.py +24 -0
  183. scitex/security/README.md +3 -3
  184. scitex/session/README.md +1 -1
  185. scitex/session/__init__.py +26 -7
  186. scitex/session/_decorator.py +1 -1
  187. scitex/sh/README.md +1 -1
  188. scitex/sh/__init__.py +7 -4
  189. scitex/social/__init__.py +155 -0
  190. scitex/social/docs/EXTERNAL_PACKAGE_BRANDING.md +149 -0
  191. scitex/stats/_mcp/_handlers/__init__.py +31 -0
  192. scitex/stats/_mcp/_handlers/_corrections.py +113 -0
  193. scitex/stats/_mcp/_handlers/_descriptive.py +78 -0
  194. scitex/stats/_mcp/_handlers/_effect_size.py +106 -0
  195. scitex/stats/_mcp/_handlers/_format.py +94 -0
  196. scitex/stats/_mcp/_handlers/_normality.py +110 -0
  197. scitex/stats/_mcp/_handlers/_posthoc.py +224 -0
  198. scitex/stats/_mcp/_handlers/_power.py +247 -0
  199. scitex/stats/_mcp/_handlers/_recommend.py +102 -0
  200. scitex/stats/_mcp/_handlers/_run_test.py +279 -0
  201. scitex/stats/_mcp/_handlers/_stars.py +48 -0
  202. scitex/stats/_mcp/handlers.py +19 -1171
  203. scitex/stats/auto/_stat_style.py +175 -0
  204. scitex/stats/auto/_style_definitions.py +411 -0
  205. scitex/stats/auto/_styles.py +22 -620
  206. scitex/stats/descriptive/__init__.py +11 -8
  207. scitex/stats/descriptive/_ci.py +39 -0
  208. scitex/stats/power/_power.py +15 -4
  209. scitex/str/__init__.py +2 -1
  210. scitex/str/_title_case.py +63 -0
  211. scitex/template/README.md +1 -1
  212. scitex/template/__init__.py +25 -10
  213. scitex/template/_code_templates.py +147 -0
  214. scitex/template/_mcp/handlers.py +81 -0
  215. scitex/template/_mcp/tool_schemas.py +55 -0
  216. scitex/template/_templates/__init__.py +51 -0
  217. scitex/template/_templates/audio.py +233 -0
  218. scitex/template/_templates/canvas.py +312 -0
  219. scitex/template/_templates/capture.py +268 -0
  220. scitex/template/_templates/config.py +43 -0
  221. scitex/template/_templates/diagram.py +294 -0
  222. scitex/template/_templates/io.py +107 -0
  223. scitex/template/_templates/module.py +53 -0
  224. scitex/template/_templates/plt.py +202 -0
  225. scitex/template/_templates/scholar.py +267 -0
  226. scitex/template/_templates/session.py +130 -0
  227. scitex/template/_templates/session_minimal.py +43 -0
  228. scitex/template/_templates/session_plot.py +67 -0
  229. scitex/template/_templates/session_stats.py +77 -0
  230. scitex/template/_templates/stats.py +323 -0
  231. scitex/template/_templates/writer.py +296 -0
  232. scitex/template/clone_writer_directory.py +5 -5
  233. scitex/ui/_backends/_email.py +10 -2
  234. scitex/ui/_backends/_webhook.py +5 -1
  235. scitex/web/_search_pubmed.py +10 -6
  236. scitex/writer/README.md +1 -1
  237. scitex/writer/_mcp/handlers.py +11 -744
  238. scitex/writer/_mcp/tool_schemas.py +5 -335
  239. scitex-2.15.2.dist-info/METADATA +648 -0
  240. {scitex-2.14.0.dist-info → scitex-2.15.2.dist-info}/RECORD +246 -150
  241. scitex/canvas/editor/flask_editor/templates/_scripts.py +0 -4933
  242. scitex/canvas/editor/flask_editor/templates/_styles.py +0 -1658
  243. scitex/dev/plt/data/mpl/PLOTTING_FUNCTIONS.yaml +0 -90
  244. scitex/dev/plt/data/mpl/PLOTTING_SIGNATURES.yaml +0 -1571
  245. scitex/dev/plt/data/mpl/PLOTTING_SIGNATURES_DETAILED.yaml +0 -6262
  246. scitex/dev/plt/data/mpl/SIGNATURES_FLATTENED.yaml +0 -1274
  247. scitex/dev/plt/data/mpl/dir_ax.txt +0 -459
  248. scitex/diagram/_compile.py +0 -312
  249. scitex/diagram/_diagram.py +0 -355
  250. scitex/diagram/_mcp/__init__.py +0 -4
  251. scitex/diagram/_mcp/handlers.py +0 -400
  252. scitex/diagram/_mcp/tool_schemas.py +0 -157
  253. scitex/diagram/_presets.py +0 -173
  254. scitex/diagram/_schema.py +0 -182
  255. scitex/diagram/_split.py +0 -278
  256. scitex/gen/_ci.py +0 -12
  257. scitex/gen/_title_case.py +0 -89
  258. scitex/plt/_mcp/__init__.py +0 -4
  259. scitex/plt/_mcp/_handlers_annotation.py +0 -102
  260. scitex/plt/_mcp/_handlers_figure.py +0 -195
  261. scitex/plt/_mcp/_handlers_plot.py +0 -252
  262. scitex/plt/_mcp/_handlers_style.py +0 -219
  263. scitex/plt/_mcp/handlers.py +0 -74
  264. scitex/plt/_mcp/tool_schemas.py +0 -497
  265. scitex/plt/mcp_server.py +0 -231
  266. scitex/scholar/data/.gitkeep +0 -0
  267. scitex/scholar/data/README.md +0 -44
  268. scitex/scholar/data/bib_files/bibliography.bib +0 -1952
  269. scitex/scholar/data/bib_files/neurovista.bib +0 -277
  270. scitex/scholar/data/bib_files/neurovista_enriched.bib +0 -441
  271. scitex/scholar/data/bib_files/neurovista_enriched_enriched.bib +0 -441
  272. scitex/scholar/data/bib_files/neurovista_processed.bib +0 -338
  273. scitex/scholar/data/bib_files/openaccess.bib +0 -89
  274. scitex/scholar/data/bib_files/pac-seizure_prediction_enriched.bib +0 -2178
  275. scitex/scholar/data/bib_files/pac.bib +0 -698
  276. scitex/scholar/data/bib_files/pac_enriched.bib +0 -1061
  277. scitex/scholar/data/bib_files/pac_processed.bib +0 -0
  278. scitex/scholar/data/bib_files/pac_titles.txt +0 -75
  279. scitex/scholar/data/bib_files/paywalled.bib +0 -98
  280. scitex/scholar/data/bib_files/related-papers-by-coauthors.bib +0 -58
  281. scitex/scholar/data/bib_files/related-papers-by-coauthors_enriched.bib +0 -87
  282. scitex/scholar/data/bib_files/seizure_prediction.bib +0 -694
  283. scitex/scholar/data/bib_files/seizure_prediction_processed.bib +0 -0
  284. scitex/scholar/data/bib_files/test_complete_enriched.bib +0 -437
  285. scitex/scholar/data/bib_files/test_final_enriched.bib +0 -437
  286. scitex/scholar/data/bib_files/test_seizure.bib +0 -46
  287. scitex/scholar/data/impact_factor/JCR_IF_2022.xlsx +0 -0
  288. scitex/scholar/data/impact_factor/JCR_IF_2024.db +0 -0
  289. scitex/scholar/data/impact_factor/JCR_IF_2024.xlsx +0 -0
  290. scitex/scholar/data/impact_factor/JCR_IF_2024_v01.db +0 -0
  291. scitex/scholar/data/impact_factor.db +0 -0
  292. scitex/scholar/examples/SUGGESTIONS.md +0 -865
  293. scitex/scholar/examples/dev.py +0 -38
  294. scitex-2.14.0.dist-info/METADATA +0 -1238
  295. /scitex/{gen → context}/_detect_environment.py +0 -0
  296. /scitex/{gen → context}/_get_notebook_path.py +0 -0
  297. /scitex/{gen/_shell.py → sh/_shell_legacy.py} +0 -0
  298. {scitex-2.14.0.dist-info → scitex-2.15.2.dist-info}/WHEEL +0 -0
  299. {scitex-2.14.0.dist-info → scitex-2.15.2.dist-info}/entry_points.txt +0 -0
  300. {scitex-2.14.0.dist-info → scitex-2.15.2.dist-info}/licenses/LICENSE +0 -0
@@ -1,18 +1,11 @@
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  #!/usr/bin/env python3
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- # Timestamp: 2026-01-09
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- # File: src/scitex/writer/_mcp.tool_schemas.py
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- # ----------------------------------------
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+ # Timestamp: 2026-01-20
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+ # File: src/scitex/writer/_mcp/tool_schemas.py
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4
 
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  """
7
6
  MCP Tool schemas for SciTeX Writer module.
8
7
 
9
- Defines available tools for LaTeX manuscript compilation:
10
- - clone_project: Create new writer project from template
11
- - compile_manuscript: Compile manuscript to PDF
12
- - compile_supplementary: Compile supplementary materials to PDF
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- - compile_revision: Compile revision document with optional change tracking
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- - get_project_info: Get project structure and status
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- - get_pdf: Get path to compiled PDF
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+ Provides usage instructions for shell-based compilation workflow.
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  """
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10
 
18
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  from __future__ import annotations
@@ -23,338 +16,15 @@ import mcp.types as types
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16
  def get_tool_schemas() -> list[types.Tool]:
24
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  """Return list of available MCP tools for writer operations."""
25
18
  return [
26
- # Clone writer project
27
19
  types.Tool(
28
- name="clone_project",
29
- description="Create a new LaTeX manuscript project from template with proper directory structure",
30
- inputSchema={
31
- "type": "object",
32
- "properties": {
33
- "project_dir": {
34
- "type": "string",
35
- "description": "Path to create project directory",
36
- },
37
- "git_strategy": {
38
- "type": "string",
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- "description": "Git initialization strategy",
40
- "enum": ["child", "parent", "origin", "none"],
41
- "default": "child",
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- },
43
- "branch": {
44
- "type": "string",
45
- "description": "Specific branch of template to clone (optional)",
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- },
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- "tag": {
48
- "type": "string",
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- "description": "Specific tag/release of template to clone (optional)",
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- },
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- },
52
- "required": ["project_dir"],
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- },
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- ),
55
- # Compile manuscript
56
- types.Tool(
57
- name="compile_manuscript",
58
- description="Compile manuscript LaTeX document to PDF",
59
- inputSchema={
60
- "type": "object",
61
- "properties": {
62
- "project_dir": {
63
- "type": "string",
64
- "description": "Path to writer project directory",
65
- },
66
- "timeout": {
67
- "type": "integer",
68
- "description": "Maximum compilation time in seconds (default: 300)",
69
- "default": 300,
70
- },
71
- "no_figs": {
72
- "type": "boolean",
73
- "description": "Exclude figures for quick compilation (default: false)",
74
- "default": False,
75
- },
76
- "ppt2tif": {
77
- "type": "boolean",
78
- "description": "Convert PowerPoint files to TIF format (WSL only, default: false)",
79
- "default": False,
80
- },
81
- "crop_tif": {
82
- "type": "boolean",
83
- "description": "Crop TIF images to remove excess whitespace (default: false)",
84
- "default": False,
85
- },
86
- "quiet": {
87
- "type": "boolean",
88
- "description": "Suppress detailed LaTeX compilation logs (default: false)",
89
- "default": False,
90
- },
91
- "verbose": {
92
- "type": "boolean",
93
- "description": "Show verbose LaTeX compilation output (default: false)",
94
- "default": False,
95
- },
96
- "force": {
97
- "type": "boolean",
98
- "description": "Force recompilation, ignore cache (default: false)",
99
- "default": False,
100
- },
101
- },
102
- "required": ["project_dir"],
103
- },
104
- ),
105
- # Compile supplementary
106
- types.Tool(
107
- name="compile_supplementary",
108
- description="Compile supplementary materials LaTeX document to PDF",
109
- inputSchema={
110
- "type": "object",
111
- "properties": {
112
- "project_dir": {
113
- "type": "string",
114
- "description": "Path to writer project directory",
115
- },
116
- "timeout": {
117
- "type": "integer",
118
- "description": "Maximum compilation time in seconds (default: 300)",
119
- "default": 300,
120
- },
121
- "no_figs": {
122
- "type": "boolean",
123
- "description": "Exclude figures for quick compilation (default: false)",
124
- "default": False,
125
- },
126
- "ppt2tif": {
127
- "type": "boolean",
128
- "description": "Convert PowerPoint files to TIF format (WSL only, default: false)",
129
- "default": False,
130
- },
131
- "crop_tif": {
132
- "type": "boolean",
133
- "description": "Crop TIF images to remove excess whitespace (default: false)",
134
- "default": False,
135
- },
136
- "quiet": {
137
- "type": "boolean",
138
- "description": "Suppress detailed LaTeX compilation logs (default: false)",
139
- "default": False,
140
- },
141
- },
142
- "required": ["project_dir"],
143
- },
144
- ),
145
- # Compile revision
146
- types.Tool(
147
- name="compile_revision",
148
- description="Compile revision document to PDF with optional change tracking",
149
- inputSchema={
150
- "type": "object",
151
- "properties": {
152
- "project_dir": {
153
- "type": "string",
154
- "description": "Path to writer project directory",
155
- },
156
- "track_changes": {
157
- "type": "boolean",
158
- "description": "Enable change tracking in output PDF (default: false)",
159
- "default": False,
160
- },
161
- "timeout": {
162
- "type": "integer",
163
- "description": "Maximum compilation time in seconds (default: 300)",
164
- "default": 300,
165
- },
166
- },
167
- "required": ["project_dir"],
168
- },
169
- ),
170
- # Get project info
171
- types.Tool(
172
- name="get_project_info",
173
- description="Get writer project structure and status information",
174
- inputSchema={
175
- "type": "object",
176
- "properties": {
177
- "project_dir": {
178
- "type": "string",
179
- "description": "Path to writer project directory",
180
- },
181
- },
182
- "required": ["project_dir"],
183
- },
184
- ),
185
- # Get PDF path
186
- types.Tool(
187
- name="get_pdf",
188
- description="Get path to compiled PDF for a document type",
189
- inputSchema={
190
- "type": "object",
191
- "properties": {
192
- "project_dir": {
193
- "type": "string",
194
- "description": "Path to writer project directory",
195
- },
196
- "doc_type": {
197
- "type": "string",
198
- "description": "Document type",
199
- "enum": ["manuscript", "supplementary", "revision"],
200
- "default": "manuscript",
201
- },
202
- },
203
- "required": ["project_dir"],
204
- },
205
- ),
206
- # List document types
207
- types.Tool(
208
- name="list_document_types",
209
- description="List available document types in a writer project",
20
+ name="writer_usage",
21
+ description="[writer] Get usage guide for SciTeX Writer LaTeX manuscript compilation system.",
210
22
  inputSchema={
211
23
  "type": "object",
212
24
  "properties": {},
213
25
  "required": [],
214
26
  },
215
27
  ),
216
- # CSV to LaTeX conversion
217
- types.Tool(
218
- name="csv_to_latex",
219
- description="Convert CSV file to LaTeX table format",
220
- inputSchema={
221
- "type": "object",
222
- "properties": {
223
- "csv_path": {
224
- "type": "string",
225
- "description": "Path to CSV file",
226
- },
227
- "output_path": {
228
- "type": "string",
229
- "description": "Output path for LaTeX file (optional)",
230
- },
231
- "caption": {
232
- "type": "string",
233
- "description": "Table caption (optional)",
234
- },
235
- "label": {
236
- "type": "string",
237
- "description": "Table label for referencing (optional)",
238
- },
239
- "longtable": {
240
- "type": "boolean",
241
- "description": "Use longtable for multi-page tables (default: false)",
242
- "default": False,
243
- },
244
- },
245
- "required": ["csv_path"],
246
- },
247
- ),
248
- # LaTeX to CSV conversion
249
- types.Tool(
250
- name="latex_to_csv",
251
- description="Convert LaTeX table to CSV format",
252
- inputSchema={
253
- "type": "object",
254
- "properties": {
255
- "latex_path": {
256
- "type": "string",
257
- "description": "Path to LaTeX file containing table",
258
- },
259
- "output_path": {
260
- "type": "string",
261
- "description": "Output path for CSV file (optional)",
262
- },
263
- "table_index": {
264
- "type": "integer",
265
- "description": "Index of table to extract if multiple exist (default: 0)",
266
- "default": 0,
267
- },
268
- },
269
- "required": ["latex_path"],
270
- },
271
- ),
272
- # PDF to image conversion
273
- types.Tool(
274
- name="pdf_to_images",
275
- description="Render PDF pages as images. Useful for creating figures from PDF or extracting specific pages.",
276
- inputSchema={
277
- "type": "object",
278
- "properties": {
279
- "pdf_path": {
280
- "type": "string",
281
- "description": "Path to PDF file",
282
- },
283
- "output_dir": {
284
- "type": "string",
285
- "description": "Output directory for images (uses temp if not specified)",
286
- },
287
- "pages": {
288
- "oneOf": [
289
- {"type": "integer"},
290
- {"type": "array", "items": {"type": "integer"}},
291
- ],
292
- "description": "Page(s) to render (0-indexed). If not specified, renders all pages.",
293
- },
294
- "dpi": {
295
- "type": "integer",
296
- "description": "Resolution in DPI (default: 150)",
297
- "default": 150,
298
- },
299
- "format": {
300
- "type": "string",
301
- "description": "Output format",
302
- "enum": ["png", "jpg"],
303
- "default": "png",
304
- },
305
- },
306
- "required": ["pdf_path"],
307
- },
308
- ),
309
- # List figures
310
- types.Tool(
311
- name="list_figures",
312
- description="List all figures in a writer project directory",
313
- inputSchema={
314
- "type": "object",
315
- "properties": {
316
- "project_dir": {
317
- "type": "string",
318
- "description": "Path to writer project directory",
319
- },
320
- "extensions": {
321
- "type": "array",
322
- "items": {"type": "string"},
323
- "description": "File extensions to include (e.g., ['.png', '.pdf']). Uses common formats if not specified.",
324
- },
325
- },
326
- "required": ["project_dir"],
327
- },
328
- ),
329
- # Convert figure format
330
- types.Tool(
331
- name="convert_figure",
332
- description="Convert figure between formats (e.g., PDF to PNG, PNG to JPG)",
333
- inputSchema={
334
- "type": "object",
335
- "properties": {
336
- "input_path": {
337
- "type": "string",
338
- "description": "Input figure path",
339
- },
340
- "output_path": {
341
- "type": "string",
342
- "description": "Output figure path (format determined by extension)",
343
- },
344
- "dpi": {
345
- "type": "integer",
346
- "description": "Resolution for PDF rasterization (default: 300)",
347
- "default": 300,
348
- },
349
- "quality": {
350
- "type": "integer",
351
- "description": "JPEG quality 1-100 (default: 95)",
352
- "default": 95,
353
- },
354
- },
355
- "required": ["input_path", "output_path"],
356
- },
357
- ),
358
28
  ]
359
29
 
360
30