scitex 2.13.0__py3-none-any.whl → 2.15.1__py3-none-any.whl

scitex/scholar/.legacy/metadata/urls/zotero_translators/PLoS Journals.js

@@ -1,284 +0,0 @@
-{
-	"translatorID": "9575e804-219e-4cd6-813d-9b690cbfc0fc",
-	"label": "PLoS Journals",
-	"creator": "Michael Berkowitz, Rintze Zelle, and Sebastian Karcher",
-	"target": "^https?://(www\\.plos(one|ntds|compbiol|pathogens|genetics|medicine|biology)\\.org|journals\\.plos\\.org(/\\w+)?)/(search|\\w+/article)",
-	"minVersion": "3.0",
-	"maxVersion": "",
-	"priority": 100,
-	"inRepository": true,
-	"translatorType": 4,
-	"browserSupport": "gcsibv",
-	"lastUpdated": "2017-01-22 19:28:36"
-}
-
-/*
-	***** BEGIN LICENSE BLOCK *****
-
-	Copyright © 2012-2016 Rintze Zelle, Michael Berkowitz, and Sebastian Karcher
-
-	This file is part of Zotero.
-
-	Zotero is free software: you can redistribute it and/or modify
-	it under the terms of the GNU Affero General Public License as published by
-	the Free Software Foundation, either version 3 of the License, or
-	(at your option) any later version.
-
-	Zotero is distributed in the hope that it will be useful,
-	but WITHOUT ANY WARRANTY; without even the implied warranty of
-	MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-	GNU Affero General Public License for more details.
-
-	You should have received a copy of the GNU Affero General Public License
-	along with Zotero. If not, see <http://www.gnu.org/licenses/>.
-
-	***** END LICENSE BLOCK *****
-*/
-
-function detectWeb(doc, url) {
-	if (url.indexOf("Search.action") != -1
-		|| url.indexOf("browse.action") != -1
-		|| url.indexOf("browseIssue.action") != -1
-		|| url.indexOf("/search?") != -1
-		|| url.indexOf("/search/") != -1
-		|| url.indexOf("/issue") != -1) {
-		return getSearchResults(doc, url, true) ? "multiple" : false;
-	} else if (ZU.xpathText(doc, '//meta[@name="citation_title"]/@content')) {
-		return "journalArticle";
-	}
-}
-
-function getSearchResults(doc, url, checkOnly) {
-	var articlex = '//article//a[contains(@href, "/article?id=")]';
-	var articles = ZU.xpath(doc, articlex),
-		items = {},
-		found = false;
-	for (var i=0; i<articles.length; i++) {
-		var url = articles[i].href;
-		var title = ZU.trimInternal(articles[i].textContent);
-		if (!url || !title) continue;
-		if (checkOnly) return true;
-		items[url] = title;
-		found = true;
-	}
-	
-	return found ? items : false;
-}
-
-function doWeb(doc, url) {
-	if (detectWeb(doc, url) == 'multiple') {
-		Zotero.selectItems(getSearchResults(doc, url), function(items) {
-			if (!items) return true;
-			//Z.debug(items)
-			var urls = [];
-			for (var i in items) {
-				urls.push(i);
-			}
-			ZU.processDocuments(urls, scrape);
-		});
-	} else {
-		scrape(doc, url);
-	}
-}
-
-function scrape(doc, url) {
-	var translator = Zotero.loadTranslator('web');
-	translator.setTranslator('951c027d-74ac-47d4-a107-9c3069ab7b48');//https://github.com/zotero/translators/blob/master/Embedded%20Metadata.js
-	translator.setDocument(doc);
-	translator.setHandler('itemDone', function (obj, item) {
-		item.libraryCatalog = "PLoS Journals";
-		if (item.abstractNote) {
-			item.abstractNote = item.abstractNote.replace(/\s*\n\s*/, "\n")
-		}
-		item.complete();
-	});
-	translator.getTranslatorObject(function(trans) {
-		trans.doWeb(doc, url);
-	});
-}/** BEGIN TEST CASES **/
-var testCases = [
-	{
-		"type": "web",
-		"url": "http://journals.plos.org/plosbiology/article?id=10.1371/journal.pbio.1001090",
-		"items": [
-			{
-				"itemType": "journalArticle",
-				"title": "The Naturally Processed CD95L Elicits a c-Yes/Calcium/PI3K-Driven Cell Migration Pathway",
-				"creators": [
-					{
-						"firstName": "Sébastien",
-						"lastName": "Tauzin",
-						"creatorType": "author"
-					},
-					{
-						"firstName": "Benjamin",
-						"lastName": "Chaigne-Delalande",
-						"creatorType": "author"
-					},
-					{
-						"firstName": "Eric",
-						"lastName": "Selva",
-						"creatorType": "author"
-					},
-					{
-						"firstName": "Nadine",
-						"lastName": "Khadra",
-						"creatorType": "author"
-					},
-					{
-						"firstName": "Sophie",
-						"lastName": "Daburon",
-						"creatorType": "author"
-					},
-					{
-						"firstName": "Cécile",
-						"lastName": "Contin-Bordes",
-						"creatorType": "author"
-					},
-					{
-						"firstName": "Patrick",
-						"lastName": "Blanco",
-						"creatorType": "author"
-					},
-					{
-						"firstName": "Jacques Le",
-						"lastName": "Seyec",
-						"creatorType": "author"
-					},
-					{
-						"firstName": "Thomas",
-						"lastName": "Ducret",
-						"creatorType": "author"
-					},
-					{
-						"firstName": "Laurent",
-						"lastName": "Counillon",
-						"creatorType": "author"
-					},
-					{
-						"firstName": "Jean-François",
-						"lastName": "Moreau",
-						"creatorType": "author"
-					},
-					{
-						"firstName": "Paul",
-						"lastName": "Hofman",
-						"creatorType": "author"
-					},
-					{
-						"firstName": "Pierre",
-						"lastName": "Vacher",
-						"creatorType": "author"
-					},
-					{
-						"firstName": "Patrick",
-						"lastName": "Legembre",
-						"creatorType": "author"
-					}
-				],
-				"date": "Jun 21, 2011",
-				"DOI": "10.1371/journal.pbio.1001090",
-				"ISSN": "1545-7885",
-				"abstractNote": "Author Summary The “death receptor” CD95 (also known as Fas) plays an essential role in ensuring immune tolerance of self antigens as well as in the elimination of the body's cells that have been infected or transformed. This receptor is engaged by the membrane-bound ligand CD95L, which can be released into blood circulation after cleavage by metalloproteases. Hitherto, most of the studies on the CD95 signal have been performed with chimeric CD95Ls that mimic the membrane-bound ligand and exhibit a level of aggregation beyond that described for the metalloprotease-cleaved ligand. Multi-aggregated CD95L elicits a caspase-driven apoptotic signal. In this study, we observe that levels of soluble and naturally processed CD95L in sera of patients suffering from lupus correlate with disease severity. Strikingly, although this soluble CD95L fails to trigger cell death unlike its chimeric version, it induces a “non-canonical” Ca2+/c-yes/PI3K-dependent signaling pathway that promotes the transmigration of T-lymphocytes across the endothelial barrier. These findings shed light on an entirely new role for the soluble CD95L that may contribute to local or systemic tissue damage by enhancing the infiltration of activated T-lymphocytes. Overall, these findings underline the importance of revisiting the role of this “apoptotic cytokine” in the context of chronic inflammatory disorders.",
-				"issue": "6",
-				"journalAbbreviation": "PLOS Biology",
-				"libraryCatalog": "PLoS Journals",
-				"pages": "e1001090",
-				"publicationTitle": "PLOS Biology",
-				"url": "http://journals.plos.org/plosbiology/article?id=10.1371/journal.pbio.1001090",
-				"volume": "9",
-				"attachments": [
-					{
-						"title": "Full Text PDF",
-						"mimeType": "application/pdf"
-					},
-					{
-						"title": "Snapshot"
-					}
-				],
-				"tags": [
-					"Apoptosis",
-					"Apoptotic signaling cascade",
-					"Cell membranes",
-					"Cell migration",
-					"Cell motility",
-					"Signal processing",
-					"Systemic lupus erythematosus",
-					"T cells"
-				],
-				"notes": [],
-				"seeAlso": []
-			}
-		]
-	},
-	{
-		"type": "web",
-		"url": "http://journals.plos.org/plosmedicine/article?id=10.1371/journal.pmed.1000098",
-		"items": [
-			{
-				"itemType": "journalArticle",
-				"title": "An Economic Evaluation of Venous Thromboembolism Prophylaxis Strategies in Critically Ill Trauma Patients at Risk of Bleeding",
-				"creators": [
-					{
-						"firstName": "T. Carter",
-						"lastName": "Chiasson",
-						"creatorType": "author"
-					},
-					{
-						"firstName": "Braden J.",
-						"lastName": "Manns",
-						"creatorType": "author"
-					},
-					{
-						"firstName": "Henry Thomas",
-						"lastName": "Stelfox",
-						"creatorType": "author"
-					}
-				],
-				"date": "Jun 23, 2009",
-				"DOI": "10.1371/journal.pmed.1000098",
-				"ISSN": "1549-1676",
-				"abstractNote": "Using decision analysis, Henry Stelfox and colleagues estimate the cost-effectiveness of three venous thromboembolism prophylaxis strategies in patients with severe traumatic injuries who were also at risk for bleeding complications.",
-				"issue": "6",
-				"journalAbbreviation": "PLOS Medicine",
-				"libraryCatalog": "PLoS Journals",
-				"pages": "e1000098",
-				"publicationTitle": "PLOS Medicine",
-				"url": "http://journals.plos.org/plosmedicine/article?id=10.1371/journal.pmed.1000098",
-				"volume": "6",
-				"attachments": [
-					{
-						"title": "Full Text PDF",
-						"mimeType": "application/pdf"
-					},
-					{
-						"title": "Snapshot"
-					}
-				],
-				"tags": [
-					"Deep vein thrombosis",
-					"Hemorrhage",
-					"Heparin",
-					"Intensive care units",
-					"Prophylaxis",
-					"Pulmonary embolism",
-					"Traumatic injury",
-					"Venous thromboembolism"
-				],
-				"notes": [],
-				"seeAlso": []
-			}
-		]
-	},
-	{
-		"type": "web",
-		"url": "http://www.plosmedicine.org/article/browseIssue.action",
-		"items": "multiple"
-	},
-	{
-		"type": "web",
-		"url": "http://www.plosbiology.org/search/simple?from=globalSimpleSearch&filterJournals=PLoSBiology&query=amygdala&x=0&y=1",
-		"items": "multiple"
-	}
-]
-/** END TEST CASES **/

scitex/scholar/.legacy/metadata/urls/zotero_translators/PRC History Review.js

@@ -1,298 +0,0 @@
-{
-	"translatorID": "56854750-868a-4de0-bfe5-fe075344a121",
-	"label": "PRC History Review",
-	"creator": "Bo An",
-	"target": "^https?://(www\\.)?prchistory\\.org/",
-	"minVersion": "3.0",
-	"maxVersion": "",
-	"priority": 100,
-	"inRepository": true,
-	"translatorType": 4,
-	"browserSupport": "gcsibv",
-	"lastUpdated": "2021-12-30 18:33:59"
-}
-
-/*
-	***** BEGIN LICENSE BLOCK *****
-
-	Copyright © 2021 Bo An
-
-	This file is part of Zotero.
-
-	Zotero is free software: you can redistribute it and/or modify
-	it under the terms of the GNU Affero General Public License as published by
-	the Free Software Foundation, either version 3 of the License, or
-	(at your option) any later version.
-
-	Zotero is distributed in the hope that it will be useful,
-	but WITHOUT ANY WARRANTY; without even the implied warranty of
-	MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-	GNU Affero General Public License for more details.
-
-	You should have received a copy of the GNU Affero General Public License
-	along with Zotero. If not, see <http://www.gnu.org/licenses/>.
-
-	***** END LICENSE BLOCK *****
-*/
-
-function detectWeb(doc, url) {
-	const articles = getArticles(doc, url);
-	if (!articles) {
-		return false;
-	}
-	else {
-		return 'multiple';
-	}
-}
-
-function doWeb(doc, url) {
-	const articles = getArticles(doc, url);
-	if (articles) {
-		Zotero.selectItems(articles, (items) => {
-			if (!items) {
-				return true;
-			}
-			for (const i in items) {
-				let isIssue = false;
-				let isSingleArticle = false;
-				let isHomePage = isHomePageUrl(url);
-				// if it's the homepage, treat links as individual journal articles without a dedicated child page, otherwise as issue articles.
-				if (!isHomePage) {
-					// if it's not homepage, further check if it is single article issue, or multiple article issue.
-					isSingleArticle = Object.keys(articles).length === 1;
-					// when there is only one article on a child page. This usually is the case with a single research paper with its own page. Note this is NOT how many items are selected by the user to add to Zotero.
-					isIssue = !isSingleArticle;
-				}
-				// pass issue information to scraper
-				scrape(doc, i, isIssue, isSingleArticle);
-			}
-			return true;
-		});
-	}
-}
-
-function getArticles(doc, url) {
-	let items = {};
-	let found = false;
-
-	// since PRC history review provides downlodable links on both the home page and its children issue pages, we need to:
-	if (isHomePageUrl(url)) {
-		const pdfLinkEls = doc.querySelectorAll('a');
-		pdfLinkEls.forEach((link) => {
-			const href = link.href;
-			const hasPDF = isPdfUrl(href);
-			if (hasPDF) {
-				items[href] = link.textContent;
-				if (found === false) {
-					found = true;
-				}
-			}
-		});
-	}
-	else {
-		const bookLinkEls = doc.querySelectorAll('p, h5');
-		bookLinkEls.forEach((bookLinkEl) => {
-			const link = bookLinkEl.querySelectorAll('a')[0];
-			if (link) {
-				const href = link.href;
-				const hasPDF = isPdfUrl(href);
-				if (hasPDF) {
-					const title = link.textContent;
-
-					if (!title.toLowerCase().includes('here') && title.length > 6) {
-						items[href] = title;
-						if (found === false) {
-							found = true;
-						}
-					}
-				}
-			}
-		});
-	}
-	return found ? items : false;
-}
-
-
-// since PRC history review often directly link to pdf, the url here, unlike press journal articles, is often an PDF link.
-function scrape(doc, url, isIssue, isSingleArticle) {
-	let articleLinkEls;
-
-	if (isIssue) {
-		articleLinkEls = doc.querySelectorAll('p, h5');
-	}
-	else {
-		articleLinkEls = doc.querySelectorAll('h5, h6');
-	}
-
-	// in order to decouple scraping from detection, the same process of finding a journal article link is repeated to access the text info associated with that link. That way, detecting functions do not need to provide any other info than the url.
-	articleLinkEls.forEach((articleDivEl, index) => {
-		const linkEl = articleDivEl.querySelectorAll("a")[0];
-		if (!linkEl) {
-			return;
-		}
-		const href = linkEl.href;
-		if (href === url) {
-			const hasPDF = isPdfUrl(href);
-			if (hasPDF) {
-				const newItem = new Zotero.Item('journalArticle');
-
-				newItem.publicationTitle = "The PRC History Review";
-
-				// add title
-				if (isIssue) {
-					newItem.title = linkEl.textContent;
-				}
-				else if (isSingleArticle) {
-					const rawTitle = linkEl.textContent;
-					const rawTitleParts = rawTitle.split(',');
-					rawTitleParts.shift();
-					newItem.title = rawTitleParts.join(",").replace(/[”“]/g, '');
-				}
-				else {
-					// if it is homepage link, parse the one-link raw title into title and other info.
-					const rawTitle = linkEl.textContent;
-					const rawTitleParts = rawTitle.split(':');
-					const firstPart = rawTitleParts[0];
-
-					const hasSeriesInfo = firstPart && firstPart.toLowerCase().endsWith('series');
-					if (hasSeriesInfo) {
-						newItem.seriesTitle = firstPart;
-						// remove series title, leaving the rest as title;
-						rawTitleParts.shift();
-						newItem.title = rawTitleParts.join(":");
-					}
-					else {
-						newItem.title = rawTitle;
-					}
-				}
-
-				// add issue info
-				if (isIssue) {
-					const issueInfoEl = doc.querySelectorAll('h5')[0];
-					if (issueInfoEl) {
-						const issueInfoArray = issueInfoEl.textContent.split('★');
-						if (issueInfoArray.length === 3) {
-							const volume = issueInfoArray[0];
-							newItem.volume = volume.toLowerCase().replace('volume', '').trim();
-							const issue = issueInfoArray[1];
-							newItem.issue = issue.toLowerCase().replace('number', '').trim();
-							const date = issueInfoArray[2];
-							newItem.date = ZU.strToISO(date);
-						}
-					}
-				}
-				else if (isSingleArticle) {
-					// if it's single article page, the issue info is two divs above the link div.
-					const issueInfoElIndex = index - 2;
-					if (issueInfoElIndex >= 0) {
-						const issueInfoEl = doc.querySelectorAll('h5')[issueInfoElIndex];
-						if (issueInfoEl) {
-							const issueInfoArray = issueInfoEl.textContent.split('★');
-							if (issueInfoArray.length === 3) {
-								const volume = issueInfoArray[0];
-								newItem.volume = volume.toLowerCase().replace('volume', '').trim();
-								const issue = issueInfoArray[1];
-								newItem.issue = issue.toLowerCase().replace('number', '').trim();
-								const date = issueInfoArray[2];
-								newItem.date = ZU.strToISO(date);
-							}
-						}
-					}
-				}
-				else {
-					// if it's homepage article, the issue info is in the previous div.
-					const lastIndex = index - 1;
-					if (lastIndex >= 0) {
-						const issueInfoEl = articleLinkEls[lastIndex];
-						const issueInfoArray = issueInfoEl.textContent.split('★');
-						if (issueInfoArray.length === 2) {
-							const issue = issueInfoArray[0];
-							newItem.issue = issue.toLowerCase().replace('number', '').trim();
-							const date = issueInfoArray[1];
-							newItem.date = ZU.strToISO(date);
-						}
-					}
-				}
-
-				// add author
-				// for issue authors
-				if (isIssue) {
-					const authorEl = articleLinkEls[index + 1];
-					if (authorEl) {
-						// in case there are multiple authors
-						const authorTexts = authorEl.textContent.trim().split(' and ');
-						authorTexts.forEach((authorText) => {
-							const authorName = authorText.split(',')[0];
-							if (authorName) {
-								newItem.creators.push(ZU.cleanAuthor(authorName, 'author', false));
-							}
-						});
-					}
-				}
-				// for single article issue's author information
-				if (isSingleArticle) {
-					const rawAuthorText = linkEl.textContent.split(',')[0];
-					if (rawAuthorText) {
-						const authorTexts = rawAuthorText.trim().split(' and ');
-						authorTexts.forEach((authorText) => {
-							const authorName = authorText.split(',')[0];
-							if (authorName) {
-								newItem.creators.push(ZU.cleanAuthor(authorName, 'author', false));
-							}
-						});
-					}
-				}
-
-				// Download pdf
-				const pdfUrl = url;
-				if (pdfUrl && isPdfUrl) {
-					newItem.attachments.push({
-						url: pdfUrl,
-						mimeType: "application/pdf",
-					});
-				}
-				newItem.complete();
-			}
-		}
-	});
-}
-
-// helper functions.
-function isPdfUrl(url) {
-	return url.toLowerCase().endsWith('.pdf');
-}
-
-function isHomePageUrl(url) {
-	return url.endsWith('the-prc-history-review/');
-}
-
-
-/** BEGIN TEST CASES **/
-var testCases = [
-	{
-		"type": "web",
-		"url": "http://prchistory.org/review-october-2021/",
-		"items": "multiple"
-	},
-	{
-		"type": "web",
-		"url": "http://prchistory.org/the-prc-history-review-5-2/",
-		"items": "multiple"
-	},
-	{
-		"type": "web",
-		"url": "http://prchistory.org/review-october-2017/",
-		"items": "multiple"
-	},
-	{
-		"type": "web",
-		"url": "http://prchistory.org/review-april-2017/",
-		"items": "multiple"
-	},
-	{
-		"type": "web",
-		"url": "http://prchistory.org/issue_6_3/",
-		"items": "multiple"
-	}
-]
-/** END TEST CASES **/