oscura 0.5.1__py3-none-any.whl → 0.7.0__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (497) hide show
  1. oscura/__init__.py +169 -167
  2. oscura/analyzers/__init__.py +3 -0
  3. oscura/analyzers/classification.py +659 -0
  4. oscura/analyzers/digital/edges.py +325 -65
  5. oscura/analyzers/digital/quality.py +293 -166
  6. oscura/analyzers/digital/timing.py +260 -115
  7. oscura/analyzers/digital/timing_numba.py +334 -0
  8. oscura/analyzers/entropy.py +605 -0
  9. oscura/analyzers/eye/diagram.py +176 -109
  10. oscura/analyzers/eye/metrics.py +5 -5
  11. oscura/analyzers/jitter/__init__.py +6 -4
  12. oscura/analyzers/jitter/ber.py +52 -52
  13. oscura/analyzers/jitter/classification.py +156 -0
  14. oscura/analyzers/jitter/decomposition.py +163 -113
  15. oscura/analyzers/jitter/spectrum.py +80 -64
  16. oscura/analyzers/ml/__init__.py +39 -0
  17. oscura/analyzers/ml/features.py +600 -0
  18. oscura/analyzers/ml/signal_classifier.py +604 -0
  19. oscura/analyzers/packet/daq.py +246 -158
  20. oscura/analyzers/packet/parser.py +12 -1
  21. oscura/analyzers/packet/payload.py +50 -2110
  22. oscura/analyzers/packet/payload_analysis.py +361 -181
  23. oscura/analyzers/packet/payload_patterns.py +133 -70
  24. oscura/analyzers/packet/stream.py +84 -23
  25. oscura/analyzers/patterns/__init__.py +26 -5
  26. oscura/analyzers/patterns/anomaly_detection.py +908 -0
  27. oscura/analyzers/patterns/clustering.py +169 -108
  28. oscura/analyzers/patterns/clustering_optimized.py +227 -0
  29. oscura/analyzers/patterns/discovery.py +1 -1
  30. oscura/analyzers/patterns/matching.py +581 -197
  31. oscura/analyzers/patterns/pattern_mining.py +778 -0
  32. oscura/analyzers/patterns/periodic.py +121 -38
  33. oscura/analyzers/patterns/sequences.py +175 -78
  34. oscura/analyzers/power/conduction.py +1 -1
  35. oscura/analyzers/power/soa.py +6 -6
  36. oscura/analyzers/power/switching.py +250 -110
  37. oscura/analyzers/protocol/__init__.py +17 -1
  38. oscura/analyzers/protocols/base.py +6 -6
  39. oscura/analyzers/protocols/ble/__init__.py +38 -0
  40. oscura/analyzers/protocols/ble/analyzer.py +809 -0
  41. oscura/analyzers/protocols/ble/uuids.py +288 -0
  42. oscura/analyzers/protocols/can.py +257 -127
  43. oscura/analyzers/protocols/can_fd.py +107 -80
  44. oscura/analyzers/protocols/flexray.py +139 -80
  45. oscura/analyzers/protocols/hdlc.py +93 -58
  46. oscura/analyzers/protocols/i2c.py +247 -106
  47. oscura/analyzers/protocols/i2s.py +138 -86
  48. oscura/analyzers/protocols/industrial/__init__.py +40 -0
  49. oscura/analyzers/protocols/industrial/bacnet/__init__.py +33 -0
  50. oscura/analyzers/protocols/industrial/bacnet/analyzer.py +708 -0
  51. oscura/analyzers/protocols/industrial/bacnet/encoding.py +412 -0
  52. oscura/analyzers/protocols/industrial/bacnet/services.py +622 -0
  53. oscura/analyzers/protocols/industrial/ethercat/__init__.py +30 -0
  54. oscura/analyzers/protocols/industrial/ethercat/analyzer.py +474 -0
  55. oscura/analyzers/protocols/industrial/ethercat/mailbox.py +339 -0
  56. oscura/analyzers/protocols/industrial/ethercat/topology.py +166 -0
  57. oscura/analyzers/protocols/industrial/modbus/__init__.py +31 -0
  58. oscura/analyzers/protocols/industrial/modbus/analyzer.py +525 -0
  59. oscura/analyzers/protocols/industrial/modbus/crc.py +79 -0
  60. oscura/analyzers/protocols/industrial/modbus/functions.py +436 -0
  61. oscura/analyzers/protocols/industrial/opcua/__init__.py +21 -0
  62. oscura/analyzers/protocols/industrial/opcua/analyzer.py +552 -0
  63. oscura/analyzers/protocols/industrial/opcua/datatypes.py +446 -0
  64. oscura/analyzers/protocols/industrial/opcua/services.py +264 -0
  65. oscura/analyzers/protocols/industrial/profinet/__init__.py +23 -0
  66. oscura/analyzers/protocols/industrial/profinet/analyzer.py +441 -0
  67. oscura/analyzers/protocols/industrial/profinet/dcp.py +263 -0
  68. oscura/analyzers/protocols/industrial/profinet/ptcp.py +200 -0
  69. oscura/analyzers/protocols/jtag.py +180 -98
  70. oscura/analyzers/protocols/lin.py +219 -114
  71. oscura/analyzers/protocols/manchester.py +4 -4
  72. oscura/analyzers/protocols/onewire.py +253 -149
  73. oscura/analyzers/protocols/parallel_bus/__init__.py +20 -0
  74. oscura/analyzers/protocols/parallel_bus/centronics.py +92 -0
  75. oscura/analyzers/protocols/parallel_bus/gpib.py +137 -0
  76. oscura/analyzers/protocols/spi.py +192 -95
  77. oscura/analyzers/protocols/swd.py +321 -167
  78. oscura/analyzers/protocols/uart.py +267 -125
  79. oscura/analyzers/protocols/usb.py +235 -131
  80. oscura/analyzers/side_channel/power.py +17 -12
  81. oscura/analyzers/signal/__init__.py +15 -0
  82. oscura/analyzers/signal/timing_analysis.py +1086 -0
  83. oscura/analyzers/signal_integrity/__init__.py +4 -1
  84. oscura/analyzers/signal_integrity/sparams.py +2 -19
  85. oscura/analyzers/spectral/chunked.py +129 -60
  86. oscura/analyzers/spectral/chunked_fft.py +300 -94
  87. oscura/analyzers/spectral/chunked_wavelet.py +100 -80
  88. oscura/analyzers/statistical/checksum.py +376 -217
  89. oscura/analyzers/statistical/classification.py +229 -107
  90. oscura/analyzers/statistical/entropy.py +78 -53
  91. oscura/analyzers/statistics/correlation.py +407 -211
  92. oscura/analyzers/statistics/outliers.py +2 -2
  93. oscura/analyzers/statistics/streaming.py +30 -5
  94. oscura/analyzers/validation.py +216 -101
  95. oscura/analyzers/waveform/measurements.py +9 -0
  96. oscura/analyzers/waveform/measurements_with_uncertainty.py +31 -15
  97. oscura/analyzers/waveform/spectral.py +500 -228
  98. oscura/api/__init__.py +31 -5
  99. oscura/api/dsl/__init__.py +582 -0
  100. oscura/{dsl → api/dsl}/commands.py +43 -76
  101. oscura/{dsl → api/dsl}/interpreter.py +26 -51
  102. oscura/{dsl → api/dsl}/parser.py +107 -77
  103. oscura/{dsl → api/dsl}/repl.py +2 -2
  104. oscura/api/dsl.py +1 -1
  105. oscura/{integrations → api/integrations}/__init__.py +1 -1
  106. oscura/{integrations → api/integrations}/llm.py +201 -102
  107. oscura/api/operators.py +3 -3
  108. oscura/api/optimization.py +144 -30
  109. oscura/api/rest_server.py +921 -0
  110. oscura/api/server/__init__.py +17 -0
  111. oscura/api/server/dashboard.py +850 -0
  112. oscura/api/server/static/README.md +34 -0
  113. oscura/api/server/templates/base.html +181 -0
  114. oscura/api/server/templates/export.html +120 -0
  115. oscura/api/server/templates/home.html +284 -0
  116. oscura/api/server/templates/protocols.html +58 -0
  117. oscura/api/server/templates/reports.html +43 -0
  118. oscura/api/server/templates/session_detail.html +89 -0
  119. oscura/api/server/templates/sessions.html +83 -0
  120. oscura/api/server/templates/waveforms.html +73 -0
  121. oscura/automotive/__init__.py +8 -1
  122. oscura/automotive/can/__init__.py +10 -0
  123. oscura/automotive/can/checksum.py +3 -1
  124. oscura/automotive/can/dbc_generator.py +590 -0
  125. oscura/automotive/can/message_wrapper.py +121 -74
  126. oscura/automotive/can/patterns.py +98 -21
  127. oscura/automotive/can/session.py +292 -56
  128. oscura/automotive/can/state_machine.py +6 -3
  129. oscura/automotive/can/stimulus_response.py +97 -75
  130. oscura/automotive/dbc/__init__.py +10 -2
  131. oscura/automotive/dbc/generator.py +84 -56
  132. oscura/automotive/dbc/parser.py +6 -6
  133. oscura/automotive/dtc/data.json +17 -102
  134. oscura/automotive/dtc/database.py +2 -2
  135. oscura/automotive/flexray/__init__.py +31 -0
  136. oscura/automotive/flexray/analyzer.py +504 -0
  137. oscura/automotive/flexray/crc.py +185 -0
  138. oscura/automotive/flexray/fibex.py +449 -0
  139. oscura/automotive/j1939/__init__.py +45 -8
  140. oscura/automotive/j1939/analyzer.py +605 -0
  141. oscura/automotive/j1939/spns.py +326 -0
  142. oscura/automotive/j1939/transport.py +306 -0
  143. oscura/automotive/lin/__init__.py +47 -0
  144. oscura/automotive/lin/analyzer.py +612 -0
  145. oscura/automotive/loaders/blf.py +13 -2
  146. oscura/automotive/loaders/csv_can.py +143 -72
  147. oscura/automotive/loaders/dispatcher.py +50 -2
  148. oscura/automotive/loaders/mdf.py +86 -45
  149. oscura/automotive/loaders/pcap.py +111 -61
  150. oscura/automotive/uds/__init__.py +4 -0
  151. oscura/automotive/uds/analyzer.py +725 -0
  152. oscura/automotive/uds/decoder.py +140 -58
  153. oscura/automotive/uds/models.py +7 -1
  154. oscura/automotive/visualization.py +1 -1
  155. oscura/cli/analyze.py +348 -0
  156. oscura/cli/batch.py +142 -122
  157. oscura/cli/benchmark.py +275 -0
  158. oscura/cli/characterize.py +137 -82
  159. oscura/cli/compare.py +224 -131
  160. oscura/cli/completion.py +250 -0
  161. oscura/cli/config_cmd.py +361 -0
  162. oscura/cli/decode.py +164 -87
  163. oscura/cli/export.py +286 -0
  164. oscura/cli/main.py +115 -31
  165. oscura/{onboarding → cli/onboarding}/__init__.py +3 -3
  166. oscura/{onboarding → cli/onboarding}/help.py +80 -58
  167. oscura/{onboarding → cli/onboarding}/tutorials.py +97 -72
  168. oscura/{onboarding → cli/onboarding}/wizard.py +55 -36
  169. oscura/cli/progress.py +147 -0
  170. oscura/cli/shell.py +157 -135
  171. oscura/cli/validate_cmd.py +204 -0
  172. oscura/cli/visualize.py +158 -0
  173. oscura/convenience.py +125 -79
  174. oscura/core/__init__.py +4 -2
  175. oscura/core/backend_selector.py +3 -3
  176. oscura/core/cache.py +126 -15
  177. oscura/core/cancellation.py +1 -1
  178. oscura/{config → core/config}/__init__.py +20 -11
  179. oscura/{config → core/config}/defaults.py +1 -1
  180. oscura/{config → core/config}/loader.py +7 -5
  181. oscura/{config → core/config}/memory.py +5 -5
  182. oscura/{config → core/config}/migration.py +1 -1
  183. oscura/{config → core/config}/pipeline.py +99 -23
  184. oscura/{config → core/config}/preferences.py +1 -1
  185. oscura/{config → core/config}/protocol.py +3 -3
  186. oscura/{config → core/config}/schema.py +426 -272
  187. oscura/{config → core/config}/settings.py +1 -1
  188. oscura/{config → core/config}/thresholds.py +195 -153
  189. oscura/core/correlation.py +5 -6
  190. oscura/core/cross_domain.py +0 -2
  191. oscura/core/debug.py +9 -5
  192. oscura/{extensibility → core/extensibility}/docs.py +158 -70
  193. oscura/{extensibility → core/extensibility}/extensions.py +160 -76
  194. oscura/{extensibility → core/extensibility}/logging.py +1 -1
  195. oscura/{extensibility → core/extensibility}/measurements.py +1 -1
  196. oscura/{extensibility → core/extensibility}/plugins.py +1 -1
  197. oscura/{extensibility → core/extensibility}/templates.py +73 -3
  198. oscura/{extensibility → core/extensibility}/validation.py +1 -1
  199. oscura/core/gpu_backend.py +11 -7
  200. oscura/core/log_query.py +101 -11
  201. oscura/core/logging.py +126 -54
  202. oscura/core/logging_advanced.py +5 -5
  203. oscura/core/memory_limits.py +108 -70
  204. oscura/core/memory_monitor.py +2 -2
  205. oscura/core/memory_progress.py +7 -7
  206. oscura/core/memory_warnings.py +1 -1
  207. oscura/core/numba_backend.py +13 -13
  208. oscura/{plugins → core/plugins}/__init__.py +9 -9
  209. oscura/{plugins → core/plugins}/base.py +7 -7
  210. oscura/{plugins → core/plugins}/cli.py +3 -3
  211. oscura/{plugins → core/plugins}/discovery.py +186 -106
  212. oscura/{plugins → core/plugins}/lifecycle.py +1 -1
  213. oscura/{plugins → core/plugins}/manager.py +7 -7
  214. oscura/{plugins → core/plugins}/registry.py +3 -3
  215. oscura/{plugins → core/plugins}/versioning.py +1 -1
  216. oscura/core/progress.py +16 -1
  217. oscura/core/provenance.py +8 -2
  218. oscura/{schemas → core/schemas}/__init__.py +2 -2
  219. oscura/{schemas → core/schemas}/device_mapping.json +2 -8
  220. oscura/{schemas → core/schemas}/packet_format.json +4 -24
  221. oscura/{schemas → core/schemas}/protocol_definition.json +2 -12
  222. oscura/core/types.py +4 -0
  223. oscura/core/uncertainty.py +3 -3
  224. oscura/correlation/__init__.py +52 -0
  225. oscura/correlation/multi_protocol.py +811 -0
  226. oscura/discovery/auto_decoder.py +117 -35
  227. oscura/discovery/comparison.py +191 -86
  228. oscura/discovery/quality_validator.py +155 -68
  229. oscura/discovery/signal_detector.py +196 -79
  230. oscura/export/__init__.py +18 -8
  231. oscura/export/kaitai_struct.py +513 -0
  232. oscura/export/scapy_layer.py +801 -0
  233. oscura/export/wireshark/generator.py +1 -1
  234. oscura/export/wireshark/templates/dissector.lua.j2 +2 -2
  235. oscura/export/wireshark_dissector.py +746 -0
  236. oscura/guidance/wizard.py +207 -111
  237. oscura/hardware/__init__.py +19 -0
  238. oscura/{acquisition → hardware/acquisition}/__init__.py +4 -4
  239. oscura/{acquisition → hardware/acquisition}/file.py +2 -2
  240. oscura/{acquisition → hardware/acquisition}/hardware.py +7 -7
  241. oscura/{acquisition → hardware/acquisition}/saleae.py +15 -12
  242. oscura/{acquisition → hardware/acquisition}/socketcan.py +1 -1
  243. oscura/{acquisition → hardware/acquisition}/streaming.py +2 -2
  244. oscura/{acquisition → hardware/acquisition}/synthetic.py +3 -3
  245. oscura/{acquisition → hardware/acquisition}/visa.py +33 -11
  246. oscura/hardware/firmware/__init__.py +29 -0
  247. oscura/hardware/firmware/pattern_recognition.py +874 -0
  248. oscura/hardware/hal_detector.py +736 -0
  249. oscura/hardware/security/__init__.py +37 -0
  250. oscura/hardware/security/side_channel_detector.py +1126 -0
  251. oscura/inference/__init__.py +4 -0
  252. oscura/inference/active_learning/observation_table.py +4 -1
  253. oscura/inference/alignment.py +216 -123
  254. oscura/inference/bayesian.py +113 -33
  255. oscura/inference/crc_reverse.py +101 -55
  256. oscura/inference/logic.py +6 -2
  257. oscura/inference/message_format.py +342 -183
  258. oscura/inference/protocol.py +95 -44
  259. oscura/inference/protocol_dsl.py +180 -82
  260. oscura/inference/signal_intelligence.py +1439 -706
  261. oscura/inference/spectral.py +99 -57
  262. oscura/inference/state_machine.py +810 -158
  263. oscura/inference/stream.py +270 -110
  264. oscura/iot/__init__.py +34 -0
  265. oscura/iot/coap/__init__.py +32 -0
  266. oscura/iot/coap/analyzer.py +668 -0
  267. oscura/iot/coap/options.py +212 -0
  268. oscura/iot/lorawan/__init__.py +21 -0
  269. oscura/iot/lorawan/crypto.py +206 -0
  270. oscura/iot/lorawan/decoder.py +801 -0
  271. oscura/iot/lorawan/mac_commands.py +341 -0
  272. oscura/iot/mqtt/__init__.py +27 -0
  273. oscura/iot/mqtt/analyzer.py +999 -0
  274. oscura/iot/mqtt/properties.py +315 -0
  275. oscura/iot/zigbee/__init__.py +31 -0
  276. oscura/iot/zigbee/analyzer.py +615 -0
  277. oscura/iot/zigbee/security.py +153 -0
  278. oscura/iot/zigbee/zcl.py +349 -0
  279. oscura/jupyter/display.py +125 -45
  280. oscura/{exploratory → jupyter/exploratory}/__init__.py +8 -8
  281. oscura/{exploratory → jupyter/exploratory}/error_recovery.py +298 -141
  282. oscura/jupyter/exploratory/fuzzy.py +746 -0
  283. oscura/{exploratory → jupyter/exploratory}/fuzzy_advanced.py +258 -100
  284. oscura/{exploratory → jupyter/exploratory}/legacy.py +464 -242
  285. oscura/{exploratory → jupyter/exploratory}/parse.py +167 -145
  286. oscura/{exploratory → jupyter/exploratory}/recovery.py +119 -87
  287. oscura/jupyter/exploratory/sync.py +612 -0
  288. oscura/{exploratory → jupyter/exploratory}/unknown.py +299 -176
  289. oscura/jupyter/magic.py +4 -4
  290. oscura/{ui → jupyter/ui}/__init__.py +2 -2
  291. oscura/{ui → jupyter/ui}/formatters.py +3 -3
  292. oscura/{ui → jupyter/ui}/progressive_display.py +153 -82
  293. oscura/loaders/__init__.py +183 -67
  294. oscura/loaders/binary.py +88 -1
  295. oscura/loaders/chipwhisperer.py +153 -137
  296. oscura/loaders/configurable.py +208 -86
  297. oscura/loaders/csv_loader.py +458 -215
  298. oscura/loaders/hdf5_loader.py +278 -119
  299. oscura/loaders/lazy.py +87 -54
  300. oscura/loaders/mmap_loader.py +1 -1
  301. oscura/loaders/numpy_loader.py +253 -116
  302. oscura/loaders/pcap.py +226 -151
  303. oscura/loaders/rigol.py +110 -49
  304. oscura/loaders/sigrok.py +201 -78
  305. oscura/loaders/tdms.py +81 -58
  306. oscura/loaders/tektronix.py +291 -174
  307. oscura/loaders/touchstone.py +182 -87
  308. oscura/loaders/tss.py +456 -0
  309. oscura/loaders/vcd.py +215 -117
  310. oscura/loaders/wav.py +155 -68
  311. oscura/reporting/__init__.py +9 -0
  312. oscura/reporting/analyze.py +352 -146
  313. oscura/reporting/argument_preparer.py +69 -14
  314. oscura/reporting/auto_report.py +97 -61
  315. oscura/reporting/batch.py +131 -58
  316. oscura/reporting/chart_selection.py +57 -45
  317. oscura/reporting/comparison.py +63 -17
  318. oscura/reporting/content/executive.py +76 -24
  319. oscura/reporting/core_formats/multi_format.py +11 -8
  320. oscura/reporting/engine.py +312 -158
  321. oscura/reporting/enhanced_reports.py +949 -0
  322. oscura/reporting/export.py +86 -43
  323. oscura/reporting/formatting/numbers.py +69 -42
  324. oscura/reporting/html.py +139 -58
  325. oscura/reporting/index.py +137 -65
  326. oscura/reporting/output.py +158 -67
  327. oscura/reporting/pdf.py +67 -102
  328. oscura/reporting/plots.py +191 -112
  329. oscura/reporting/sections.py +88 -47
  330. oscura/reporting/standards.py +104 -61
  331. oscura/reporting/summary_generator.py +75 -55
  332. oscura/reporting/tables.py +138 -54
  333. oscura/reporting/templates/enhanced/protocol_re.html +525 -0
  334. oscura/sessions/__init__.py +14 -23
  335. oscura/sessions/base.py +3 -3
  336. oscura/sessions/blackbox.py +106 -10
  337. oscura/sessions/generic.py +2 -2
  338. oscura/sessions/legacy.py +783 -0
  339. oscura/side_channel/__init__.py +63 -0
  340. oscura/side_channel/dpa.py +1025 -0
  341. oscura/utils/__init__.py +15 -1
  342. oscura/utils/bitwise.py +118 -0
  343. oscura/{builders → utils/builders}/__init__.py +1 -1
  344. oscura/{comparison → utils/comparison}/__init__.py +6 -6
  345. oscura/{comparison → utils/comparison}/compare.py +202 -101
  346. oscura/{comparison → utils/comparison}/golden.py +83 -63
  347. oscura/{comparison → utils/comparison}/limits.py +313 -89
  348. oscura/{comparison → utils/comparison}/mask.py +151 -45
  349. oscura/{comparison → utils/comparison}/trace_diff.py +1 -1
  350. oscura/{comparison → utils/comparison}/visualization.py +147 -89
  351. oscura/{component → utils/component}/__init__.py +3 -3
  352. oscura/{component → utils/component}/impedance.py +122 -58
  353. oscura/{component → utils/component}/reactive.py +165 -168
  354. oscura/{component → utils/component}/transmission_line.py +3 -3
  355. oscura/{filtering → utils/filtering}/__init__.py +6 -6
  356. oscura/{filtering → utils/filtering}/base.py +1 -1
  357. oscura/{filtering → utils/filtering}/convenience.py +2 -2
  358. oscura/{filtering → utils/filtering}/design.py +169 -93
  359. oscura/{filtering → utils/filtering}/filters.py +2 -2
  360. oscura/{filtering → utils/filtering}/introspection.py +2 -2
  361. oscura/utils/geometry.py +31 -0
  362. oscura/utils/imports.py +184 -0
  363. oscura/utils/lazy.py +1 -1
  364. oscura/{math → utils/math}/__init__.py +2 -2
  365. oscura/{math → utils/math}/arithmetic.py +114 -48
  366. oscura/{math → utils/math}/interpolation.py +139 -106
  367. oscura/utils/memory.py +129 -66
  368. oscura/utils/memory_advanced.py +92 -9
  369. oscura/utils/memory_extensions.py +10 -8
  370. oscura/{optimization → utils/optimization}/__init__.py +1 -1
  371. oscura/{optimization → utils/optimization}/search.py +2 -2
  372. oscura/utils/performance/__init__.py +58 -0
  373. oscura/utils/performance/caching.py +889 -0
  374. oscura/utils/performance/lsh_clustering.py +333 -0
  375. oscura/utils/performance/memory_optimizer.py +699 -0
  376. oscura/utils/performance/optimizations.py +675 -0
  377. oscura/utils/performance/parallel.py +654 -0
  378. oscura/utils/performance/profiling.py +661 -0
  379. oscura/{pipeline → utils/pipeline}/base.py +1 -1
  380. oscura/{pipeline → utils/pipeline}/composition.py +1 -1
  381. oscura/{pipeline → utils/pipeline}/parallel.py +3 -2
  382. oscura/{pipeline → utils/pipeline}/pipeline.py +1 -1
  383. oscura/{pipeline → utils/pipeline}/reverse_engineering.py +412 -221
  384. oscura/{search → utils/search}/__init__.py +3 -3
  385. oscura/{search → utils/search}/anomaly.py +188 -58
  386. oscura/utils/search/context.py +294 -0
  387. oscura/{search → utils/search}/pattern.py +138 -10
  388. oscura/utils/serial.py +51 -0
  389. oscura/utils/storage/__init__.py +61 -0
  390. oscura/utils/storage/database.py +1166 -0
  391. oscura/{streaming → utils/streaming}/chunked.py +302 -143
  392. oscura/{streaming → utils/streaming}/progressive.py +1 -1
  393. oscura/{streaming → utils/streaming}/realtime.py +3 -2
  394. oscura/{triggering → utils/triggering}/__init__.py +6 -6
  395. oscura/{triggering → utils/triggering}/base.py +6 -6
  396. oscura/{triggering → utils/triggering}/edge.py +2 -2
  397. oscura/{triggering → utils/triggering}/pattern.py +2 -2
  398. oscura/{triggering → utils/triggering}/pulse.py +115 -74
  399. oscura/{triggering → utils/triggering}/window.py +2 -2
  400. oscura/utils/validation.py +32 -0
  401. oscura/validation/__init__.py +121 -0
  402. oscura/{compliance → validation/compliance}/__init__.py +5 -5
  403. oscura/{compliance → validation/compliance}/advanced.py +5 -5
  404. oscura/{compliance → validation/compliance}/masks.py +1 -1
  405. oscura/{compliance → validation/compliance}/reporting.py +127 -53
  406. oscura/{compliance → validation/compliance}/testing.py +114 -52
  407. oscura/validation/compliance_tests.py +915 -0
  408. oscura/validation/fuzzer.py +990 -0
  409. oscura/validation/grammar_tests.py +596 -0
  410. oscura/validation/grammar_validator.py +904 -0
  411. oscura/validation/hil_testing.py +977 -0
  412. oscura/{quality → validation/quality}/__init__.py +4 -4
  413. oscura/{quality → validation/quality}/ensemble.py +251 -171
  414. oscura/{quality → validation/quality}/explainer.py +3 -3
  415. oscura/{quality → validation/quality}/scoring.py +1 -1
  416. oscura/{quality → validation/quality}/warnings.py +4 -4
  417. oscura/validation/regression_suite.py +808 -0
  418. oscura/validation/replay.py +788 -0
  419. oscura/{testing → validation/testing}/__init__.py +2 -2
  420. oscura/{testing → validation/testing}/synthetic.py +5 -5
  421. oscura/visualization/__init__.py +9 -0
  422. oscura/visualization/accessibility.py +1 -1
  423. oscura/visualization/annotations.py +64 -67
  424. oscura/visualization/colors.py +7 -7
  425. oscura/visualization/digital.py +180 -81
  426. oscura/visualization/eye.py +236 -85
  427. oscura/visualization/interactive.py +320 -143
  428. oscura/visualization/jitter.py +587 -247
  429. oscura/visualization/layout.py +169 -134
  430. oscura/visualization/optimization.py +103 -52
  431. oscura/visualization/palettes.py +1 -1
  432. oscura/visualization/power.py +427 -211
  433. oscura/visualization/power_extended.py +626 -297
  434. oscura/visualization/presets.py +2 -0
  435. oscura/visualization/protocols.py +495 -181
  436. oscura/visualization/render.py +79 -63
  437. oscura/visualization/reverse_engineering.py +171 -124
  438. oscura/visualization/signal_integrity.py +460 -279
  439. oscura/visualization/specialized.py +190 -100
  440. oscura/visualization/spectral.py +670 -255
  441. oscura/visualization/thumbnails.py +166 -137
  442. oscura/visualization/waveform.py +150 -63
  443. oscura/workflows/__init__.py +3 -0
  444. oscura/{batch → workflows/batch}/__init__.py +5 -5
  445. oscura/{batch → workflows/batch}/advanced.py +150 -75
  446. oscura/workflows/batch/aggregate.py +531 -0
  447. oscura/workflows/batch/analyze.py +236 -0
  448. oscura/{batch → workflows/batch}/logging.py +2 -2
  449. oscura/{batch → workflows/batch}/metrics.py +1 -1
  450. oscura/workflows/complete_re.py +1144 -0
  451. oscura/workflows/compliance.py +44 -54
  452. oscura/workflows/digital.py +197 -51
  453. oscura/workflows/legacy/__init__.py +12 -0
  454. oscura/{workflow → workflows/legacy}/dag.py +4 -1
  455. oscura/workflows/multi_trace.py +9 -9
  456. oscura/workflows/power.py +42 -62
  457. oscura/workflows/protocol.py +82 -49
  458. oscura/workflows/reverse_engineering.py +351 -150
  459. oscura/workflows/signal_integrity.py +157 -82
  460. oscura-0.7.0.dist-info/METADATA +661 -0
  461. oscura-0.7.0.dist-info/RECORD +591 -0
  462. oscura/batch/aggregate.py +0 -300
  463. oscura/batch/analyze.py +0 -139
  464. oscura/dsl/__init__.py +0 -73
  465. oscura/exceptions.py +0 -59
  466. oscura/exploratory/fuzzy.py +0 -513
  467. oscura/exploratory/sync.py +0 -384
  468. oscura/exporters/__init__.py +0 -94
  469. oscura/exporters/csv.py +0 -303
  470. oscura/exporters/exporters.py +0 -44
  471. oscura/exporters/hdf5.py +0 -217
  472. oscura/exporters/html_export.py +0 -701
  473. oscura/exporters/json_export.py +0 -291
  474. oscura/exporters/markdown_export.py +0 -367
  475. oscura/exporters/matlab_export.py +0 -354
  476. oscura/exporters/npz_export.py +0 -219
  477. oscura/exporters/spice_export.py +0 -210
  478. oscura/search/context.py +0 -149
  479. oscura/session/__init__.py +0 -34
  480. oscura/session/annotations.py +0 -289
  481. oscura/session/history.py +0 -313
  482. oscura/session/session.py +0 -520
  483. oscura/workflow/__init__.py +0 -13
  484. oscura-0.5.1.dist-info/METADATA +0 -583
  485. oscura-0.5.1.dist-info/RECORD +0 -481
  486. /oscura/core/{config.py → config/legacy.py} +0 -0
  487. /oscura/{extensibility → core/extensibility}/__init__.py +0 -0
  488. /oscura/{extensibility → core/extensibility}/registry.py +0 -0
  489. /oscura/{plugins → core/plugins}/isolation.py +0 -0
  490. /oscura/{schemas → core/schemas}/bus_configuration.json +0 -0
  491. /oscura/{builders → utils/builders}/signal_builder.py +0 -0
  492. /oscura/{optimization → utils/optimization}/parallel.py +0 -0
  493. /oscura/{pipeline → utils/pipeline}/__init__.py +0 -0
  494. /oscura/{streaming → utils/streaming}/__init__.py +0 -0
  495. {oscura-0.5.1.dist-info → oscura-0.7.0.dist-info}/WHEEL +0 -0
  496. {oscura-0.5.1.dist-info → oscura-0.7.0.dist-info}/entry_points.txt +0 -0
  497. {oscura-0.5.1.dist-info → oscura-0.7.0.dist-info}/licenses/LICENSE +0 -0
@@ -195,53 +195,165 @@ class GridSearch:
195
195
  early_stop: Stop if score reaches this threshold
196
196
 
197
197
  Returns:
198
- Optimization result
198
+ Optimization result with best parameters and all evaluated combinations.
199
199
  """
200
200
  start_time = time.time()
201
201
  all_results: list[tuple[dict[str, Any], float]] = []
202
202
  best_params: dict[str, Any] = {}
203
- best_score = float("-inf") if maximize else float("inf")
204
-
205
- # Generate all combinations
206
- param_names = [s.name for s in self.param_spaces]
207
- param_values = [list(s) for s in self.param_spaces]
203
+ best_score = self._initial_best_score(maximize)
208
204
 
205
+ param_names, param_values = self._prepare_parameter_grid()
209
206
  total = self.num_combinations
207
+
210
208
  if self.verbose:
211
209
  logger.info(f"Grid search: {total} combinations")
212
210
 
213
211
  for i, values in enumerate(itertools.product(*param_values)):
214
212
  params = dict(zip(param_names, values, strict=False))
215
-
216
- try:
217
- score = objective(params, data)
218
- except Exception as e:
219
- logger.warning(f"Objective failed for {params}: {e}")
220
- score = float("-inf") if maximize else float("inf")
213
+ score = self._evaluate_objective(objective, params, data, maximize)
221
214
 
222
215
  all_results.append((params, score))
216
+ best_score, best_params = self._update_best(
217
+ score, params, best_score, best_params, maximize
218
+ )
223
219
 
224
- # Update best
225
- if maximize:
226
- if score > best_score:
227
- best_score = score
228
- best_params = params.copy()
229
- elif score < best_score:
230
- best_score = score
231
- best_params = params.copy()
232
-
233
- # Progress
234
- if self._progress_callback:
235
- self._progress_callback(i + 1, total)
220
+ self._report_progress(i + 1, total)
236
221
 
237
- # Early stopping
238
- if early_stop is not None and (
239
- (maximize and score >= early_stop) or (not maximize and score <= early_stop)
240
- ):
241
- if self.verbose:
242
- logger.info(f"Early stop at {i + 1}/{total}")
222
+ if self._should_stop_early(score, early_stop, maximize, i + 1, total):
243
223
  break
244
224
 
225
+ return self._build_result(best_params, best_score, all_results, start_time)
226
+
227
+ def _initial_best_score(self, maximize: bool) -> float:
228
+ """Get initial best score for optimization.
229
+
230
+ Args:
231
+ maximize: Whether maximizing or minimizing.
232
+
233
+ Returns:
234
+ Initial best score value.
235
+ """
236
+ return float("-inf") if maximize else float("inf")
237
+
238
+ def _prepare_parameter_grid(self) -> tuple[list[str], list[list[Any]]]:
239
+ """Prepare parameter grid for iteration.
240
+
241
+ Returns:
242
+ Tuple of (parameter names, parameter values).
243
+ """
244
+ param_names = [s.name for s in self.param_spaces]
245
+ param_values = [list(s) for s in self.param_spaces]
246
+ return param_names, param_values
247
+
248
+ def _evaluate_objective(
249
+ self,
250
+ objective: Callable[[dict[str, Any], Any], float],
251
+ params: dict[str, Any],
252
+ data: Any,
253
+ maximize: bool,
254
+ ) -> float:
255
+ """Evaluate objective function with error handling.
256
+
257
+ Args:
258
+ objective: Objective function to evaluate.
259
+ params: Parameter combination.
260
+ data: Data for objective.
261
+ maximize: Whether maximizing.
262
+
263
+ Returns:
264
+ Score from objective or fallback on error.
265
+ """
266
+ try:
267
+ return objective(params, data)
268
+ except Exception as e:
269
+ logger.warning(f"Objective failed for {params}: {e}")
270
+ return float("-inf") if maximize else float("inf")
271
+
272
+ def _update_best(
273
+ self,
274
+ score: float,
275
+ params: dict[str, Any],
276
+ best_score: float,
277
+ best_params: dict[str, Any],
278
+ maximize: bool,
279
+ ) -> tuple[float, dict[str, Any]]:
280
+ """Update best score and parameters if improved.
281
+
282
+ Args:
283
+ score: Current score.
284
+ params: Current parameters.
285
+ best_score: Current best score.
286
+ best_params: Current best parameters.
287
+ maximize: Whether maximizing.
288
+
289
+ Returns:
290
+ Tuple of (updated best score, updated best params).
291
+ """
292
+ is_better = score > best_score if maximize else score < best_score
293
+ if is_better:
294
+ # NECESSARY COPY: Preserves best parameters snapshot.
295
+ # Each iteration's best params must be isolated from current mutations.
296
+ return score, params.copy()
297
+ return best_score, best_params
298
+
299
+ def _report_progress(self, current: int, total: int) -> None:
300
+ """Report progress to callback if registered.
301
+
302
+ Args:
303
+ current: Current iteration.
304
+ total: Total iterations.
305
+ """
306
+ if self._progress_callback:
307
+ self._progress_callback(current, total)
308
+
309
+ def _should_stop_early(
310
+ self,
311
+ score: float,
312
+ early_stop: float | None,
313
+ maximize: bool,
314
+ current: int,
315
+ total: int,
316
+ ) -> bool:
317
+ """Check if early stopping criteria met.
318
+
319
+ Args:
320
+ score: Current score.
321
+ early_stop: Early stop threshold.
322
+ maximize: Whether maximizing.
323
+ current: Current iteration.
324
+ total: Total iterations.
325
+
326
+ Returns:
327
+ True if should stop early.
328
+ """
329
+ if early_stop is None:
330
+ return False
331
+
332
+ should_stop = (maximize and score >= early_stop) or (not maximize and score <= early_stop)
333
+
334
+ if should_stop and self.verbose:
335
+ logger.info(f"Early stop at {current}/{total}")
336
+
337
+ return should_stop
338
+
339
+ def _build_result(
340
+ self,
341
+ best_params: dict[str, Any],
342
+ best_score: float,
343
+ all_results: list[tuple[dict[str, Any], float]],
344
+ start_time: float,
345
+ ) -> OptimizationResult:
346
+ """Build optimization result object.
347
+
348
+ Args:
349
+ best_params: Best parameters found.
350
+ best_score: Best score achieved.
351
+ all_results: All evaluated combinations.
352
+ start_time: Start time of optimization.
353
+
354
+ Returns:
355
+ OptimizationResult object.
356
+ """
245
357
  elapsed = time.time() - start_time
246
358
 
247
359
  if self.verbose:
@@ -322,9 +434,11 @@ class RandomSearch:
322
434
  if maximize:
323
435
  if score > best_score:
324
436
  best_score = score
437
+ # NECESSARY COPY: Isolates best params from current/future mutations.
325
438
  best_params = params.copy()
326
439
  elif score < best_score:
327
440
  best_score = score
441
+ # NECESSARY COPY: Isolates best params from current/future mutations.
328
442
  best_params = params.copy()
329
443
 
330
444
  return OptimizationResult(