opentrons 8.6.0__py3-none-any.whl

opentrons/protocol_runner/legacy_context_plugin.py

@@ -0,0 +1,116 @@
+"""Customize the ProtocolEngine to monitor and control legacy (APIv2) protocols."""
+from __future__ import annotations
+
+import asyncio
+from contextlib import ExitStack
+from typing import Optional
+
+from opentrons.legacy_commands.types import CommandMessage as LegacyCommand
+from opentrons.legacy_broker import LegacyBroker
+from opentrons.protocol_api.core.legacy.load_info import LoadInfo
+from opentrons.protocol_engine import AbstractPlugin, actions as pe_actions
+from opentrons.util.broker import ReadOnlyBroker
+
+from .legacy_command_mapper import LegacyCommandMapper
+
+
+class LegacyContextPlugin(AbstractPlugin):
+    """A ProtocolEngine plugin to monitor and control an APIv2 protocol.
+
+    In the legacy ProtocolContext, protocol execution is accomplished
+    by direct communication with the HardwareControlAPI, as opposed to an
+    intermediate layer like the ProtocolEngine. This plugin wraps up
+    and hides this behavior, so the ProtocolEngine can monitor
+    the run of a legacy protocol without affecting the execution of
+    the protocol commands themselves.
+
+    This plugin allows a ProtocolEngine to subscribe to what is being done with the
+    legacy ProtocolContext, and insert matching commands into ProtocolEngine state for
+    purely progress-tracking purposes.
+    """
+
+    def __init__(
+        self,
+        engine_loop: asyncio.AbstractEventLoop,
+        broker: LegacyBroker,
+        equipment_broker: ReadOnlyBroker[LoadInfo],
+        legacy_command_mapper: Optional[LegacyCommandMapper] = None,
+    ) -> None:
+        """Initialize the plugin with its dependencies."""
+        self._engine_loop = engine_loop
+
+        self._broker = broker
+        self._equipment_broker = equipment_broker
+        self._legacy_command_mapper = legacy_command_mapper or LegacyCommandMapper()
+
+        self._subscription_exit_stack: Optional[ExitStack] = None
+
+    def setup(self) -> None:
+        """Set up the plugin.
+
+        Subscribe to the APIv2 context's message brokers to be informed
+        of the APIv2 protocol's activity.
+        """
+        # Subscribe to activity on the APIv2 context,
+        # and arrange to unsubscribe when this plugin is torn down.
+        # Use an exit stack so if any part of this setup fails,
+        # we clean up the parts that succeeded in reverse order.
+        with ExitStack() as exit_stack:
+            command_broker_unsubscribe = self._broker.subscribe(
+                topic="command",
+                handler=self._handle_legacy_command,
+            )
+            exit_stack.callback(command_broker_unsubscribe)
+
+            exit_stack.enter_context(
+                self._equipment_broker.subscribed(
+                    callback=self._handle_equipment_loaded
+                )
+            )
+
+            # All subscriptions succeeded.
+            # Save the exit stack so our teardown method can use it later
+            # to clean up these subscriptions.
+            self._subscription_exit_stack = exit_stack.pop_all()
+
+    # todo(mm, 2024-08-21): This no longer needs to be async.
+    async def teardown(self) -> None:
+        """Tear down the plugin, undoing the work done in `setup()`.
+
+        Called by Protocol Engine.
+        At this point, the APIv2 protocol script must have exited.
+        """
+        if self._subscription_exit_stack is not None:
+            self._subscription_exit_stack.close()
+            self._subscription_exit_stack = None
+
+    def handle_action(self, action: pe_actions.Action) -> None:
+        """React to a ProtocolEngine action."""
+        # TODO(jbl 2022-07-06) handle_action stub should be completely removed
+        pass
+
+    def _handle_legacy_command(self, command: LegacyCommand) -> None:
+        """Handle a command reported by the legacy APIv2 protocol.
+
+        Used as a broker callback, so this will run in the APIv2 protocol's thread.
+        """
+        pe_actions = self._legacy_command_mapper.map_command(command=command)
+        future = asyncio.run_coroutine_threadsafe(
+            self._dispatch_action_list(pe_actions), self._engine_loop
+        )
+        future.result()
+
+    def _handle_equipment_loaded(self, load_info: LoadInfo) -> None:
+        """Handle an equipment load reported by the legacy APIv2 protocol.
+
+        Used as a broker callback, so this will run in the APIv2 protocol's thread.
+        """
+        pe_actions = self._legacy_command_mapper.map_equipment_load(load_info=load_info)
+        future = asyncio.run_coroutine_threadsafe(
+            self._dispatch_action_list(pe_actions), self._engine_loop
+        )
+        future.result()
+
+    async def _dispatch_action_list(self, actions: list[pe_actions.Action]) -> None:
+        for action in actions:
+            self.dispatch(action)

opentrons/protocol_runner/protocol_runner.py

@@ -0,0 +1,530 @@
+"""Protocol run control and management."""
+import asyncio
+from typing import List, NamedTuple, Optional, Union
+
+from abc import ABC, abstractmethod
+
+import anyio
+
+from opentrons.hardware_control import HardwareControlAPI
+from opentrons import protocol_reader
+from opentrons.legacy_broker import LegacyBroker
+from opentrons.protocol_api import ParameterContext
+from opentrons.protocol_api.core.legacy.load_info import LoadInfo
+from opentrons.protocol_engine.commands.command import CommandStatus
+from opentrons.protocol_engine.error_recovery_policy import ErrorRecoveryType
+from opentrons.protocol_reader import (
+    ProtocolSource,
+    JsonProtocolConfig,
+    PythonProtocolConfig,
+)
+from opentrons.protocol_engine import (
+    ProtocolEngine,
+    StateSummary,
+    Command,
+    commands as pe_commands,
+)
+from opentrons.protocol_engine.types import CommandAnnotation
+from opentrons.protocols.parse import PythonParseMode
+from opentrons.util.async_helpers import asyncio_yield
+from opentrons.util.broker import Broker
+
+from .task_queue import TaskQueue
+from .json_file_reader import JsonFileReader
+from .json_translator import JsonTranslator
+from .legacy_context_plugin import LegacyContextPlugin
+from .python_protocol_wrappers import (
+    LEGACY_PYTHON_API_VERSION_CUTOFF,
+    LEGACY_JSON_SCHEMA_VERSION_CUTOFF,
+    PythonAndLegacyFileReader,
+    ProtocolContextCreator,
+    PythonProtocolExecutor,
+)
+from ..protocol_engine.errors import ProtocolCommandFailedError
+from ..protocol_engine.types import (
+    PostRunHardwareState,
+    DeckConfigurationType,
+    RunTimeParameter,
+    PrimitiveRunTimeParamValuesType,
+    CSVRuntimeParamPaths,
+)
+from ..protocols.types import PythonProtocol
+
+
+class RunResult(NamedTuple):
+    """Result data from a run, pulled from the ProtocolEngine."""
+
+    commands: List[Command]
+    state_summary: StateSummary
+    parameters: List[RunTimeParameter]
+    command_annotations: List[CommandAnnotation]
+
+
+class AbstractRunner(ABC):
+    """An interface to manage and control a protocol run.
+
+    A Runner is primarily responsible for feeding a ProtocolEngine
+    with commands and control signals. These commands and signals are
+    generated by protocol files, hardware signals, or externally via
+    the HTTP robot-server.
+
+    A Runner controls a single run. Once the run is finished,
+    you will need a new Runner to do another run.
+    """
+
+    def __init__(self, protocol_engine: ProtocolEngine) -> None:
+        self._protocol_engine = protocol_engine
+        self._broker = LegacyBroker()
+
+    # TODO(mm, 2023-10-03): `LegacyBroker` is specific to Python protocols and JSON protocols ≤v5.
+    # We'll need to extend this in order to report progress from newer JSON protocols.
+    #
+    # TODO(mm, 2023-10-04): When we switch this to return a new `Broker` instead of a
+    # `LegacyBroker`, we should annotate the return type as a `ReadOnlyBroker`.
+    @property
+    def broker(self) -> LegacyBroker:
+        """Return a broker that you can subscribe to in order to monitor protocol progress.
+
+        Currently, this only returns messages for `PythonAndLegacyRunner`.
+        Otherwise, it's a no-op.
+        """
+        return self._broker
+
+    @property
+    def run_time_parameters(self) -> List[RunTimeParameter]:
+        """Parameter definitions defined by protocol, if any. Currently only for python protocols."""
+        return []
+
+    @property
+    def command_annotations(self) -> List[CommandAnnotation]:
+        """Command annotations defined by protocol, if any. Currently only for json protocols."""
+        return []
+
+    def was_started(self) -> bool:
+        """Whether the run has been started.
+
+        This value is latched; once it is True, it will never become False.
+        """
+        return self._protocol_engine.state_view.commands.has_been_played()
+
+    def play(self, deck_configuration: Optional[DeckConfigurationType] = None) -> None:
+        """Start or resume the run."""
+        # todo(mm, 2024-07-09): The deck configuration is set at the same time here for
+        # historical reasons. It's unsafe to change the deck configuration mid-run
+        # and we're relying on the caller to not do that.
+        self._protocol_engine.set_deck_configuration(deck_configuration)
+        self._protocol_engine.play()
+
+    def pause(self) -> None:
+        """Pause the run."""
+        self._protocol_engine.request_pause()
+
+    async def stop(self) -> None:
+        """Stop (cancel) the run."""
+        if self.was_started():
+            await self._protocol_engine.request_stop()
+        else:
+            await self._protocol_engine.finish(
+                drop_tips_after_run=False,
+                set_run_status=False,
+                post_run_hardware_state=PostRunHardwareState.STAY_ENGAGED_IN_PLACE,
+            )
+
+    def resume_from_recovery(self, reconcile_false_positive: bool) -> None:
+        """See `ProtocolEngine.resume_from_recovery()`."""
+        self._protocol_engine.resume_from_recovery(reconcile_false_positive)
+
+    @abstractmethod
+    async def run(
+        self,
+        deck_configuration: DeckConfigurationType,
+        protocol_source: Optional[ProtocolSource] = None,
+        run_time_param_values: Optional[PrimitiveRunTimeParamValuesType] = None,
+    ) -> RunResult:
+        """Run a given protocol to completion."""
+
+
+class PythonAndLegacyRunner(AbstractRunner):
+    """Protocol runner implementation for Python protocols, and JSON protocols ≤v5."""
+
+    def __init__(
+        self,
+        protocol_engine: ProtocolEngine,
+        hardware_api: HardwareControlAPI,
+        task_queue: Optional[TaskQueue] = None,
+        python_and_legacy_file_reader: Optional[PythonAndLegacyFileReader] = None,
+        protocol_context_creator: Optional[ProtocolContextCreator] = None,
+        python_protocol_executor: Optional[PythonProtocolExecutor] = None,
+        post_run_hardware_state: PostRunHardwareState = PostRunHardwareState.HOME_AND_STAY_ENGAGED,
+        drop_tips_after_run: bool = True,
+    ) -> None:
+        """Initialize the PythonAndLegacyRunner with its dependencies."""
+        super().__init__(protocol_engine)
+        self._hardware_api = hardware_api
+        self._protocol_file_reader = (
+            python_and_legacy_file_reader or PythonAndLegacyFileReader()
+        )
+        self._protocol_context_creator = (
+            protocol_context_creator
+            or ProtocolContextCreator(
+                hardware_api=hardware_api,
+                protocol_engine=protocol_engine,
+            )
+        )
+        self._protocol_executor = python_protocol_executor or PythonProtocolExecutor()
+        # TODO(mc, 2022-01-11): replace task queue with specific implementations
+        # of runner interface
+        self._task_queue = task_queue or TaskQueue()
+        self._task_queue.set_cleanup_func(
+            func=protocol_engine.finish,
+            drop_tips_after_run=drop_tips_after_run,
+            post_run_hardware_state=post_run_hardware_state,
+        )
+        self._parameter_context: Optional[ParameterContext] = None
+
+    @property
+    def run_time_parameters(self) -> List[RunTimeParameter]:
+        """Parameter definitions defined by protocol, if any."""
+        if self._parameter_context is not None:
+            return self._parameter_context.export_parameters_for_analysis()
+        return []
+
+    async def load(
+        self,
+        protocol_source: ProtocolSource,
+        python_parse_mode: PythonParseMode,
+        run_time_param_values: Optional[PrimitiveRunTimeParamValuesType],
+        run_time_param_paths: Optional[CSVRuntimeParamPaths],
+    ) -> None:
+        """Load a Python or JSONv5(& older) ProtocolSource into managed ProtocolEngine."""
+        labware_definitions = await protocol_reader.extract_labware_definitions(
+            protocol_source=protocol_source
+        )
+        for definition in labware_definitions:
+            # Assume adding a labware definition is fast and there are not many labware
+            # definitions, so we don't need to yield here.
+            self._protocol_engine.add_labware_definition(definition)
+
+        # fixme(mm, 2022-12-23): This does I/O and compute-bound parsing that will block
+        # the event loop. Jira RSS-165.
+        protocol = self._protocol_file_reader.read(
+            protocol_source, labware_definitions, python_parse_mode
+        )
+        if isinstance(protocol, PythonProtocol):
+            self._parameter_context = ParameterContext(api_version=protocol.api_level)
+            run_time_parameters_with_overrides = (
+                self._protocol_executor.extract_run_parameters(
+                    protocol=protocol,
+                    parameter_context=self._parameter_context,
+                    run_time_param_overrides=run_time_param_values,
+                    run_time_param_file_overrides=run_time_param_paths,
+                )
+            )
+        else:
+            run_time_parameters_with_overrides = None
+        equipment_broker = None
+
+        if protocol.api_level < LEGACY_PYTHON_API_VERSION_CUTOFF:
+            equipment_broker = Broker[LoadInfo]()
+            self._protocol_engine.add_plugin(
+                LegacyContextPlugin(
+                    engine_loop=asyncio.get_running_loop(),
+                    broker=self._broker,
+                    equipment_broker=equipment_broker,
+                )
+            )
+            self._hardware_api.should_taskify_movement_execution(taskify=True)
+        else:
+            self._hardware_api.should_taskify_movement_execution(taskify=False)
+
+        context = self._protocol_context_creator.create(
+            protocol=protocol,
+            broker=self._broker,
+            equipment_broker=equipment_broker,
+        )
+        initial_home_command = pe_commands.HomeCreate(
+            # this command homes all axes, including pipette plunger and gripper jaw
+            params=pe_commands.HomeParams(axes=None)
+        )
+
+        async def run_func() -> None:
+            await self._protocol_engine.add_and_execute_command(
+                request=initial_home_command
+            )
+            await self._protocol_executor.execute(
+                protocol=protocol,
+                context=context,
+                run_time_parameters_with_overrides=run_time_parameters_with_overrides,
+            )
+
+        self._task_queue.set_run_func(run_func)
+
+    async def run(  # noqa: D102
+        self,
+        deck_configuration: DeckConfigurationType,
+        protocol_source: Optional[ProtocolSource] = None,
+        run_time_param_values: Optional[PrimitiveRunTimeParamValuesType] = None,
+        run_time_param_paths: Optional[CSVRuntimeParamPaths] = None,
+        python_parse_mode: PythonParseMode = PythonParseMode.NORMAL,
+    ) -> RunResult:
+        # TODO(mc, 2022-01-11): move load to runner creation, remove from `run`
+        # currently `protocol_source` arg is only used by tests & protocol analyzer
+        if protocol_source:
+            await self.load(
+                protocol_source=protocol_source,
+                python_parse_mode=python_parse_mode,
+                run_time_param_values=run_time_param_values,
+                run_time_param_paths=run_time_param_paths,
+            )
+
+        self.play(deck_configuration=deck_configuration)
+        self._task_queue.start()
+        await self._task_queue.join()
+
+        run_data = self._protocol_engine.state_view.get_summary()
+        commands = self._protocol_engine.state_view.commands.get_all()
+        parameters = self.run_time_parameters
+        return RunResult(
+            commands=commands,
+            state_summary=run_data,
+            parameters=parameters,
+            command_annotations=[],
+        )
+
+
+class JsonRunner(AbstractRunner):
+    """Protocol runner implementation for json protocols."""
+
+    def __init__(
+        self,
+        protocol_engine: ProtocolEngine,
+        hardware_api: HardwareControlAPI,
+        task_queue: Optional[TaskQueue] = None,
+        json_file_reader: Optional[JsonFileReader] = None,
+        json_translator: Optional[JsonTranslator] = None,
+        post_run_hardware_state: PostRunHardwareState = PostRunHardwareState.HOME_AND_STAY_ENGAGED,
+        drop_tips_after_run: bool = True,
+    ) -> None:
+        """Initialize the JsonRunner with its dependencies."""
+        super().__init__(protocol_engine)
+        self._protocol_engine = protocol_engine
+        self._json_file_reader = json_file_reader or JsonFileReader()
+        self._json_translator = json_translator or JsonTranslator()
+        # TODO(mc, 2022-01-11): replace task queue with specific implementations
+        # of runner interface
+        self._task_queue = (
+            task_queue or TaskQueue()
+        )  # cleanup_func=protocol_engine.finish))
+        self._task_queue.set_cleanup_func(
+            func=protocol_engine.finish,
+            drop_tips_after_run=drop_tips_after_run,
+            post_run_hardware_state=post_run_hardware_state,
+        )
+
+        hardware_api.should_taskify_movement_execution(taskify=False)
+        self._queued_commands: List[pe_commands.CommandCreate] = []
+        self._command_annotations: List[CommandAnnotation] = []
+
+    @property
+    def command_annotations(self) -> List[CommandAnnotation]:
+        """Command annotations defined by protocol, if any."""
+        return self._command_annotations
+
+    async def load(self, protocol_source: ProtocolSource) -> None:
+        """Load a JSONv6+ ProtocolSource into managed ProtocolEngine."""
+        labware_definitions = await protocol_reader.extract_labware_definitions(
+            protocol_source=protocol_source
+        )
+        for definition in labware_definitions:
+            # Assume adding a labware definition is fast and there are not many labware
+            # definitions, so we don't need to yield here.
+            self._protocol_engine.add_labware_definition(definition)
+
+        protocol = await anyio.to_thread.run_sync(
+            self._json_file_reader.read,
+            protocol_source,
+        )
+
+        commands = await anyio.to_thread.run_sync(
+            self._json_translator.translate_commands,
+            protocol,
+        )
+
+        # Add commands and liquids to the ProtocolEngine.
+        #
+        # We yield on every iteration so that loading large protocols doesn't block the
+        # event loop. With a 24-step 10k-command protocol (See RQA-443), adding all the
+        # commands can take 3 to 7 seconds.
+        #
+        # It wouldn't be safe to do this in a worker thread because each addition
+        # invokes the ProtocolEngine's ChangeNotifier machinery, which is not
+        # thread-safe.
+        liquids = await anyio.to_thread.run_sync(
+            self._json_translator.translate_liquids, protocol
+        )
+        for liquid in liquids:
+            self._protocol_engine.add_liquid(
+                id=liquid.id,
+                name=liquid.displayName,
+                description=liquid.description,
+                color=liquid.displayColor,
+            )
+            await asyncio_yield()
+
+        self._command_annotations = await anyio.to_thread.run_sync(
+            self._json_translator.translate_command_annotations,
+            protocol,
+        )
+
+        initial_home_command = pe_commands.HomeCreate(
+            params=pe_commands.HomeParams(axes=None)
+        )
+        # this command homes all axes, including pipette plugner and gripper jaw
+        self._protocol_engine.add_command(request=initial_home_command)
+
+        self._queued_commands = commands
+
+        self._task_queue.set_run_func(func=self._add_and_execute_commands)
+
+    async def run(  # noqa: D102
+        self,
+        deck_configuration: DeckConfigurationType,
+        protocol_source: Optional[ProtocolSource] = None,
+        run_time_param_values: Optional[PrimitiveRunTimeParamValuesType] = None,
+    ) -> RunResult:
+        # TODO(mc, 2022-01-11): move load to runner creation, remove from `run`
+        # currently `protocol_source` arg is only used by tests
+        if protocol_source:
+            await self.load(protocol_source)
+
+        self.play(deck_configuration=deck_configuration)
+        self._task_queue.start()
+        await self._task_queue.join()
+
+        run_data = self._protocol_engine.state_view.get_summary()
+        commands = self._protocol_engine.state_view.commands.get_all()
+        return RunResult(
+            commands=commands,
+            state_summary=run_data,
+            parameters=[],
+            command_annotations=self._command_annotations,
+        )
+
+    async def _add_and_execute_commands(self) -> None:
+        for command_request in self._queued_commands:
+            # todo(mm, 2024-07-05): This logic to handle the various command execution
+            # outcomes mirrors PAPI's ChildThreadTransport. Simplify or deduplicate it.
+            executed_command = (
+                await self._protocol_engine.add_and_execute_command_wait_for_recovery(
+                    command_request
+                )
+            )
+            if executed_command.error is not None:
+                error_recovery_type = (
+                    self._protocol_engine.state_view.commands.get_error_recovery_type(
+                        executed_command.id
+                    )
+                )
+                error_should_fail_run = (
+                    error_recovery_type == ErrorRecoveryType.FAIL_RUN
+                )
+                if error_should_fail_run:
+                    raise ProtocolCommandFailedError(
+                        original_error=executed_command.error,
+                        message=f"{executed_command.error.errorType}: {executed_command.error.detail}",
+                    )
+            elif executed_command.status == CommandStatus.QUEUED:
+                # This can happen if another task stops the ProtocolEngine before
+                # the ProtocolEngine gets around to executing this command.
+                # See docs on add_and_execute_command_wait_for_recovery().
+                break
+
+
+class LiveRunner(AbstractRunner):
+    """Protocol runner implementation for live http protocols."""
+
+    def __init__(
+        self,
+        protocol_engine: ProtocolEngine,
+        hardware_api: HardwareControlAPI,
+        task_queue: Optional[TaskQueue] = None,
+    ) -> None:
+        """Initialize the LiveRunner with its dependencies."""
+        super().__init__(protocol_engine)
+        self._protocol_engine = protocol_engine
+        # TODO(mc, 2022-01-11): replace task queue with specific implementations
+        # of runner interface
+        self._hardware_api = hardware_api
+        self._task_queue = task_queue or TaskQueue()
+        self._task_queue.set_cleanup_func(func=protocol_engine.finish)
+
+        self._hardware_api.should_taskify_movement_execution(taskify=False)
+
+    # TODO(tz, 6-10-2024): explore moving this method into the constructor.
+    def prepare(self) -> None:
+        """Set the task queue to wait until all commands are executed."""
+        self._task_queue.set_run_func(func=self._protocol_engine.wait_until_complete)
+
+    async def run(  # noqa: D102
+        self,
+        deck_configuration: DeckConfigurationType,
+        protocol_source: Optional[ProtocolSource] = None,
+        run_time_param_values: Optional[PrimitiveRunTimeParamValuesType] = None,
+    ) -> RunResult:
+        assert protocol_source is None
+        await self._hardware_api.home()
+        self.play(deck_configuration=deck_configuration)
+        self._task_queue.start()
+        await self._task_queue.join()
+
+        run_data = self._protocol_engine.state_view.get_summary()
+        commands = self._protocol_engine.state_view.commands.get_all()
+        return RunResult(
+            commands=commands,
+            state_summary=run_data,
+            parameters=[],
+            command_annotations=[],
+        )
+
+
+AnyRunner = Union[PythonAndLegacyRunner, JsonRunner, LiveRunner]
+
+
+def create_protocol_runner(
+    protocol_engine: ProtocolEngine,
+    hardware_api: HardwareControlAPI,
+    protocol_config: Union[JsonProtocolConfig, PythonProtocolConfig],
+    task_queue: Optional[TaskQueue] = None,
+    json_file_reader: Optional[JsonFileReader] = None,
+    json_translator: Optional[JsonTranslator] = None,
+    python_and_legacy_file_reader: Optional[PythonAndLegacyFileReader] = None,
+    protocol_context_creator: Optional[ProtocolContextCreator] = None,
+    python_protocol_executor: Optional[PythonProtocolExecutor] = None,
+    post_run_hardware_state: PostRunHardwareState = PostRunHardwareState.HOME_AND_STAY_ENGAGED,
+    drop_tips_after_run: bool = True,
+) -> Union[JsonRunner, PythonAndLegacyRunner]:
+    """Create a protocol runner."""
+    if (
+        isinstance(protocol_config, JsonProtocolConfig)
+        and protocol_config.schema_version >= LEGACY_JSON_SCHEMA_VERSION_CUTOFF
+    ):
+        return JsonRunner(
+            protocol_engine=protocol_engine,
+            hardware_api=hardware_api,
+            json_file_reader=json_file_reader,
+            json_translator=json_translator,
+            task_queue=task_queue,
+            post_run_hardware_state=post_run_hardware_state,
+            drop_tips_after_run=drop_tips_after_run,
+        )
+    else:
+        return PythonAndLegacyRunner(
+            protocol_engine=protocol_engine,
+            hardware_api=hardware_api,
+            task_queue=task_queue,
+            python_and_legacy_file_reader=python_and_legacy_file_reader,
+            protocol_context_creator=protocol_context_creator,
+            python_protocol_executor=python_protocol_executor,
+            post_run_hardware_state=post_run_hardware_state,
+            drop_tips_after_run=drop_tips_after_run,
+        )