meta-edc 0.2.24__py3-none-any.whl → 1.4.0__py3-none-any.whl

meta_reports/migrations/0046_auto_20240829_0250.py

@@ -0,0 +1,54 @@
+# Generated by Django 5.0.8 on 2024-08-28 23:50
+
+import django_db_views.migration_functions
+import django_db_views.operations
+from django.db import migrations
+
+
+class Migration(migrations.Migration):
+
+    dependencies = [
+        ("meta_reports", "0045_auto_20240829_0248"),
+    ]
+
+    operations = [
+        django_db_views.operations.ViewRunPython(
+            code=django_db_views.migration_functions.ForwardViewMigration(
+                "select *, uuid() as id, now() as `created`, 'onstudy_missing_values_view' as `report_model` from (SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No HIV Diagnosis date' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.hiv_diagnosis_date IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No VL value or VL date' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.viral_load IS NULL OR crf.viral_load_date IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No CD4 value or CD4 date' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.cd4 IS NULL OR crf.cd4_date IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No current ARV start date' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.current_arv_regimen_start_date IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No current ARV start date but previous ARV is YES' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.has_previous_arv_regimen = 'Yes' AND crf.current_arv_regimen_start_date IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'Other current ARV regimen missing' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id LEFT JOIN meta_lists_arvregimens AS arvregimen ON crf.current_arv_regimen_id = arvregimen.id WHERE crf.other_current_arv_regimen IS NULL AND arvregimen.name = 'OTHER' GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.glucose' AS label_lower, 'FBG/OGTT: missing OGTT' AS label, COUNT(*) AS records FROM meta_subject_glucose AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE (NOT crf.fbg_value IS NULL AND crf.ogtt_value IS NULL) AND ogtt_performed = 'Yes' GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified) as A ORDER BY subject_identifier, site_id",
+                "onstudy_missing_values_view",
+                engine="django.db.backends.mysql",
+            ),
+            reverse_code=django_db_views.migration_functions.BackwardViewMigration(
+                "select *, uuid() as id, now() as `created`, 'onstudy_missing_values_view' as `report_model` from (SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No HIV Diagnosis date' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.hiv_diagnosis_date IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No VL value' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.viral_load IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No VL date' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.viral_load_date IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No CD4 value' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.cd4 IS NULL OR crf.cd4_date IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No current ARV start date' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.current_arv_regimen_start_date IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No current ARV start date but previous ARV is YES' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.has_previous_arv_regimen = 'Yes' AND crf.current_arv_regimen_start_date IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'Other current ARV regimen missing' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id LEFT JOIN meta_lists_arvregimens AS arvregimen ON crf.current_arv_regimen_id = arvregimen.id WHERE crf.other_current_arv_regimen IS NULL AND arvregimen.name = 'OTHER' GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.glucose' AS label_lower, 'FBG/OGTT: missing OGTT' AS label, COUNT(*) AS records FROM meta_subject_glucose AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE (NOT crf.fbg_value IS NULL AND crf.ogtt_value IS NULL) AND ogtt_performed = 'Yes' GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified) as A ORDER BY subject_identifier, site_id",
+                "onstudy_missing_values_view",
+                engine="django.db.backends.mysql",
+            ),
+            atomic=False,
+        ),
+        django_db_views.operations.ViewRunPython(
+            code=django_db_views.migration_functions.ForwardViewMigration(
+                "select *, get_random_uuid() as id, now() as created, 'onstudy_missing_values_view' as report_model from (SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No HIV Diagnosis date' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.hiv_diagnosis_date IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No VL value or VL date' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.viral_load IS NULL OR crf.viral_load_date IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No CD4 value or CD4 date' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.cd4 IS NULL OR crf.cd4_date IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No current ARV start date' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.current_arv_regimen_start_date IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No current ARV start date but previous ARV is YES' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.has_previous_arv_regimen = 'Yes' AND crf.current_arv_regimen_start_date IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'Other current ARV regimen missing' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id LEFT JOIN meta_lists_arvregimens AS arvregimen ON crf.current_arv_regimen_id = arvregimen.id WHERE crf.other_current_arv_regimen IS NULL AND arvregimen.name = 'OTHER' GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.glucose' AS label_lower, 'FBG/OGTT: missing OGTT' AS label, COUNT(*) AS records FROM meta_subject_glucose AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE (NOT crf.fbg_value IS NULL AND crf.ogtt_value IS NULL) AND ogtt_performed = 'Yes' GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified) as A ORDER BY subject_identifier, site_id",
+                "onstudy_missing_values_view",
+                engine="django.db.backends.postgresql",
+            ),
+            reverse_code=django_db_views.migration_functions.BackwardViewMigration(
+                "select *, get_random_uuid() as id, now() as created, 'onstudy_missing_values_view' as report_model from (SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No HIV Diagnosis date' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.hiv_diagnosis_date IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No VL value' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.viral_load IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No VL date' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.viral_load_date IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No CD4 value' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.cd4 IS NULL OR crf.cd4_date IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No current ARV start date' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.current_arv_regimen_start_date IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No current ARV start date but previous ARV is YES' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.has_previous_arv_regimen = 'Yes' AND crf.current_arv_regimen_start_date IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'Other current ARV regimen missing' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id LEFT JOIN meta_lists_arvregimens AS arvregimen ON crf.current_arv_regimen_id = arvregimen.id WHERE crf.other_current_arv_regimen IS NULL AND arvregimen.name = 'OTHER' GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.glucose' AS label_lower, 'FBG/OGTT: missing OGTT' AS label, COUNT(*) AS records FROM meta_subject_glucose AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE (NOT crf.fbg_value IS NULL AND crf.ogtt_value IS NULL) AND ogtt_performed = 'Yes' GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified) as A ORDER BY subject_identifier, site_id",
+                "onstudy_missing_values_view",
+                engine="django.db.backends.postgresql",
+            ),
+            atomic=False,
+        ),
+        django_db_views.operations.ViewRunPython(
+            code=django_db_views.migration_functions.ForwardViewMigration(
+                "select *, uuid() as id, datetime() as created, 'onstudy_missing_values_view' as report_model from (SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No HIV Diagnosis date' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.hiv_diagnosis_date IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No VL value or VL date' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.viral_load IS NULL OR crf.viral_load_date IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No CD4 value or CD4 date' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.cd4 IS NULL OR crf.cd4_date IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No current ARV start date' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.current_arv_regimen_start_date IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No current ARV start date but previous ARV is YES' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.has_previous_arv_regimen = 'Yes' AND crf.current_arv_regimen_start_date IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'Other current ARV regimen missing' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id LEFT JOIN meta_lists_arvregimens AS arvregimen ON crf.current_arv_regimen_id = arvregimen.id WHERE crf.other_current_arv_regimen IS NULL AND arvregimen.name = 'OTHER' GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.glucose' AS label_lower, 'FBG/OGTT: missing OGTT' AS label, COUNT(*) AS records FROM meta_subject_glucose AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE (NOT crf.fbg_value IS NULL AND crf.ogtt_value IS NULL) AND ogtt_performed = 'Yes' GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified) as A ORDER BY subject_identifier, site_id",
+                "onstudy_missing_values_view",
+                engine="django.db.backends.sqlite3",
+            ),
+            reverse_code=django_db_views.migration_functions.BackwardViewMigration(
+                "select *, uuid() as id, datetime() as created, 'onstudy_missing_values_view' as report_model from (SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No HIV Diagnosis date' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.hiv_diagnosis_date IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No VL value' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.viral_load IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No VL date' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.viral_load_date IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No CD4 value' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.cd4 IS NULL OR crf.cd4_date IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No current ARV start date' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.current_arv_regimen_start_date IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'No current ARV start date but previous ARV is YES' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE crf.has_previous_arv_regimen = 'Yes' AND crf.current_arv_regimen_start_date IS NULL GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.patienthistory' AS label_lower, 'Other current ARV regimen missing' AS label, COUNT(*) AS records FROM meta_subject_patienthistory AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id LEFT JOIN meta_lists_arvregimens AS arvregimen ON crf.current_arv_regimen_id = arvregimen.id WHERE crf.other_current_arv_regimen IS NULL AND arvregimen.name = 'OTHER' GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified UNION SELECT v.subject_identifier, crf.id AS original_id, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified, 'meta_subject.glucose' AS label_lower, 'FBG/OGTT: missing OGTT' AS label, COUNT(*) AS records FROM meta_subject_glucose AS crf LEFT JOIN meta_subject_subjectvisit AS v ON v.id = crf.subject_visit_id WHERE (NOT crf.fbg_value IS NULL AND crf.ogtt_value IS NULL) AND ogtt_performed = 'Yes' GROUP BY v.subject_identifier, crf.subject_visit_id, crf.report_datetime, crf.site_id, v.visit_code, v.visit_code_sequence, v.schedule_name, crf.modified) as A ORDER BY subject_identifier, site_id",
+                "onstudy_missing_values_view",
+                engine="django.db.backends.sqlite3",
+            ),
+            atomic=False,
+        ),
+    ]

meta_reports/migrations/0047_impsubstitutions.py

@@ -0,0 +1,56 @@
+# Generated by Django 5.1 on 2024-09-09 20:37
+
+from django.db import migrations, models
+
+
+class Migration(migrations.Migration):
+
+    dependencies = [
+        ("meta_reports", "0046_auto_20240829_0250"),
+    ]
+
+    operations = [
+        migrations.CreateModel(
+            name="ImpSubstitutions",
+            fields=[
+                (
+                    "id",
+                    models.BigAutoField(
+                        auto_created=True, primary_key=True, serialize=False, verbose_name="ID"
+                    ),
+                ),
+                ("report_model", models.CharField(max_length=50)),
+                ("subject_identifier", models.CharField(max_length=25)),
+                ("created", models.DateTimeField()),
+                ("original_id", models.UUIDField(null=True)),
+                ("sid", models.IntegerField(null=True, verbose_name="Original SID")),
+                (
+                    "dispensed_sid",
+                    models.IntegerField(null=True, verbose_name="Dispensed SID"),
+                ),
+                (
+                    "arm_match",
+                    models.CharField(
+                        choices=[
+                            ("Yes", "Yes"),
+                            ("No", "No"),
+                            ("not_evaluated", "Not evaluated"),
+                        ],
+                        default="not_evaluated",
+                        max_length=15,
+                    ),
+                ),
+                ("allocated_datetime", models.DateTimeField(null=True)),
+                ("user_created", models.CharField(max_length=25)),
+                ("user_modified", models.CharField(max_length=25)),
+                ("modified", models.DateTimeField(null=True)),
+            ],
+            options={
+                "verbose_name": "IMP Substitutions",
+                "verbose_name_plural": "IMP Substitutions",
+                "db_table": "imp_subjectitutions_view",
+                "managed": False,
+                "default_permissions": ("view", "export", "viewallsites"),
+            },
+        ),
+    ]

meta_reports/migrations/0048_auto_20240909_2338.py

@@ -0,0 +1,48 @@
+# Generated by Django 5.1 on 2024-09-09 20:38
+
+import django_db_views.migration_functions
+import django_db_views.operations
+from django.db import migrations
+
+
+class Migration(migrations.Migration):
+
+    dependencies = [
+        ("meta_reports", "0047_impsubstitutions"),
+    ]
+
+    operations = [
+        django_db_views.operations.ViewRunPython(
+            code=django_db_views.migration_functions.ForwardViewMigration(
+                "select *, uuid() as id, now() as `created`, 'meta_reports.imp_subjectitutions_view' as `report_model` from (SELECT s.subject_identifier, s.sid, s.dispensed_sid, arm_match, r.allocated_datetime, s.site_id, s.user_created, s.user_modified, s.modified, s.id AS original_id FROM meta_pharmacy_substitutions AS s LEFT JOIN meta_rando_randomizationlist AS r ON r.subject_identifier = s.subject_identifier ORDER BY s.subject_identifier) as A ORDER BY subject_identifier, site_id",
+                "imp_subjectitutions_view",
+                engine="django.db.backends.mysql",
+            ),
+            reverse_code=django_db_views.migration_functions.BackwardViewMigration(
+                "", "imp_subjectitutions_view", engine="django.db.backends.mysql"
+            ),
+            atomic=False,
+        ),
+        django_db_views.operations.ViewRunPython(
+            code=django_db_views.migration_functions.ForwardViewMigration(
+                "select *, get_random_uuid() as id, now() as created, 'meta_reports.imp_subjectitutions_view' as report_model from (SELECT s.subject_identifier, s.sid, s.dispensed_sid, arm_match, r.allocated_datetime, s.site_id, s.user_created, s.user_modified, s.modified, s.id AS original_id FROM meta_pharmacy_substitutions AS s LEFT JOIN meta_rando_randomizationlist AS r ON r.subject_identifier = s.subject_identifier ORDER BY s.subject_identifier NULLS FIRST) as A ORDER BY subject_identifier, site_id",
+                "imp_subjectitutions_view",
+                engine="django.db.backends.postgresql",
+            ),
+            reverse_code=django_db_views.migration_functions.BackwardViewMigration(
+                "", "imp_subjectitutions_view", engine="django.db.backends.postgresql"
+            ),
+            atomic=False,
+        ),
+        django_db_views.operations.ViewRunPython(
+            code=django_db_views.migration_functions.ForwardViewMigration(
+                "select *, uuid() as id, datetime() as created, 'meta_reports.imp_subjectitutions_view' as report_model from (SELECT s.subject_identifier, s.sid, s.dispensed_sid, arm_match, r.allocated_datetime, s.site_id, s.user_created, s.user_modified, s.modified, s.id AS original_id FROM meta_pharmacy_substitutions AS s LEFT JOIN meta_rando_randomizationlist AS r ON r.subject_identifier = s.subject_identifier ORDER BY s.subject_identifier) as A ORDER BY subject_identifier, site_id",
+                "imp_subjectitutions_view",
+                engine="django.db.backends.sqlite3",
+            ),
+            reverse_code=django_db_views.migration_functions.BackwardViewMigration(
+                "", "imp_subjectitutions_view", engine="django.db.backends.sqlite3"
+            ),
+            atomic=False,
+        ),
+    ]

meta_reports/migrations/0049_auto_20240911_0327.py

@@ -0,0 +1,54 @@
+# Generated by Django 5.1 on 2024-09-11 00:27
+
+import django_db_views.migration_functions
+import django_db_views.operations
+from django.db import migrations
+
+
+class Migration(migrations.Migration):
+
+    dependencies = [
+        ("meta_reports", "0048_auto_20240909_2338"),
+    ]
+
+    operations = [
+        django_db_views.operations.ViewRunPython(
+            code=django_db_views.migration_functions.ForwardViewMigration(
+                "select *, uuid() as id, now() as `created`, 'meta_reports.imp_subjectitutions_view' as `report_model` from (SELECT s.subject_identifier, s.sid, s.dispensed_sid, arm_match, s.report_datetime, r.allocated_datetime, s.site_id, s.user_created, s.user_modified, s.modified, s.id AS original_id FROM meta_pharmacy_substitutions AS s LEFT JOIN meta_rando_randomizationlist AS r ON r.subject_identifier = s.subject_identifier ORDER BY s.subject_identifier) as A ORDER BY subject_identifier, site_id",
+                "imp_subjectitutions_view",
+                engine="django.db.backends.mysql",
+            ),
+            reverse_code=django_db_views.migration_functions.BackwardViewMigration(
+                "select *, uuid() as id, now() as `created`, 'meta_reports.imp_subjectitutions_view' as `report_model` from (SELECT s.subject_identifier, s.sid, s.dispensed_sid, arm_match, r.allocated_datetime, s.site_id, s.user_created, s.user_modified, s.modified, s.id AS original_id FROM meta_pharmacy_substitutions AS s LEFT JOIN meta_rando_randomizationlist AS r ON r.subject_identifier = s.subject_identifier ORDER BY s.subject_identifier) as A ORDER BY subject_identifier, site_id",
+                "imp_subjectitutions_view",
+                engine="django.db.backends.mysql",
+            ),
+            atomic=False,
+        ),
+        django_db_views.operations.ViewRunPython(
+            code=django_db_views.migration_functions.ForwardViewMigration(
+                "select *, get_random_uuid() as id, now() as created, 'meta_reports.imp_subjectitutions_view' as report_model from (SELECT s.subject_identifier, s.sid, s.dispensed_sid, arm_match, s.report_datetime, r.allocated_datetime, s.site_id, s.user_created, s.user_modified, s.modified, s.id AS original_id FROM meta_pharmacy_substitutions AS s LEFT JOIN meta_rando_randomizationlist AS r ON r.subject_identifier = s.subject_identifier ORDER BY s.subject_identifier NULLS FIRST) as A ORDER BY subject_identifier, site_id",
+                "imp_subjectitutions_view",
+                engine="django.db.backends.postgresql",
+            ),
+            reverse_code=django_db_views.migration_functions.BackwardViewMigration(
+                "select *, get_random_uuid() as id, now() as created, 'meta_reports.imp_subjectitutions_view' as report_model from (SELECT s.subject_identifier, s.sid, s.dispensed_sid, arm_match, r.allocated_datetime, s.site_id, s.user_created, s.user_modified, s.modified, s.id AS original_id FROM meta_pharmacy_substitutions AS s LEFT JOIN meta_rando_randomizationlist AS r ON r.subject_identifier = s.subject_identifier ORDER BY s.subject_identifier NULLS FIRST) as A ORDER BY subject_identifier, site_id",
+                "imp_subjectitutions_view",
+                engine="django.db.backends.postgresql",
+            ),
+            atomic=False,
+        ),
+        django_db_views.operations.ViewRunPython(
+            code=django_db_views.migration_functions.ForwardViewMigration(
+                "select *, uuid() as id, datetime() as created, 'meta_reports.imp_subjectitutions_view' as report_model from (SELECT s.subject_identifier, s.sid, s.dispensed_sid, arm_match, s.report_datetime, r.allocated_datetime, s.site_id, s.user_created, s.user_modified, s.modified, s.id AS original_id FROM meta_pharmacy_substitutions AS s LEFT JOIN meta_rando_randomizationlist AS r ON r.subject_identifier = s.subject_identifier ORDER BY s.subject_identifier) as A ORDER BY subject_identifier, site_id",
+                "imp_subjectitutions_view",
+                engine="django.db.backends.sqlite3",
+            ),
+            reverse_code=django_db_views.migration_functions.BackwardViewMigration(
+                "select *, uuid() as id, datetime() as created, 'meta_reports.imp_subjectitutions_view' as report_model from (SELECT s.subject_identifier, s.sid, s.dispensed_sid, arm_match, r.allocated_datetime, s.site_id, s.user_created, s.user_modified, s.modified, s.id AS original_id FROM meta_pharmacy_substitutions AS s LEFT JOIN meta_rando_randomizationlist AS r ON r.subject_identifier = s.subject_identifier ORDER BY s.subject_identifier) as A ORDER BY subject_identifier, site_id",
+                "imp_subjectitutions_view",
+                engine="django.db.backends.sqlite3",
+            ),
+            atomic=False,
+        ),
+    ]

meta_reports/migrations/0050_alter_endpoints_created.py

@@ -0,0 +1,19 @@
+# Generated by Django 5.1 on 2024-10-07 22:02
+
+import edc_utils.date
+from django.db import migrations, models
+
+
+class Migration(migrations.Migration):
+
+    dependencies = [
+        ("meta_reports", "0049_auto_20240911_0327"),
+    ]
+
+    operations = [
+        migrations.AlterField(
+            model_name="endpoints",
+            name="created",
+            field=models.DateTimeField(default=edc_utils.date.get_utcnow),
+        ),
+    ]

meta_reports/migrations/0051_remove_endpoints_baseline_datetime_and_more.py

@@ -0,0 +1,40 @@
+# Generated by Django 5.1 on 2024-10-09 16:04
+
+from django.db import migrations, models
+
+
+class Migration(migrations.Migration):
+
+    dependencies = [
+        ("meta_reports", "0050_alter_endpoints_created"),
+    ]
+
+    operations = [
+        migrations.RemoveField(
+            model_name="endpoints",
+            name="baseline_datetime",
+        ),
+        migrations.RemoveField(
+            model_name="endpoints",
+            name="fbg_datetime",
+        ),
+        migrations.RemoveField(
+            model_name="endpoints",
+            name="offstudy_datetime",
+        ),
+        migrations.AddField(
+            model_name="endpoints",
+            name="baseline_date",
+            field=models.DateField(null=True),
+        ),
+        migrations.AddField(
+            model_name="endpoints",
+            name="fbg_date",
+            field=models.DateField(null=True),
+        ),
+        migrations.AddField(
+            model_name="endpoints",
+            name="offstudy_date",
+            field=models.DateField(null=True),
+        ),
+    ]

meta_reports/migrations/0052_lastimpvisit.py

@@ -0,0 +1,57 @@
+# Generated by Django 5.1.2 on 2024-10-16 00:53
+
+import django.db.models.deletion
+import edc_utils.date
+from django.db import migrations, models
+
+
+class Migration(migrations.Migration):
+
+    dependencies = [
+        ("meta_reports", "0051_remove_endpoints_baseline_datetime_and_more"),
+        ("sites", "0002_alter_domain_unique"),
+    ]
+
+    operations = [
+        migrations.CreateModel(
+            name="LastImpVisit",
+            fields=[
+                (
+                    "id",
+                    models.BigAutoField(
+                        auto_created=True, primary_key=True, serialize=False, verbose_name="ID"
+                    ),
+                ),
+                ("report_model", models.CharField(max_length=50)),
+                ("subject_identifier", models.CharField(max_length=25)),
+                ("created", models.DateTimeField(default=edc_utils.date.get_utcnow)),
+                ("reference_date", models.DateField(null=True)),
+                ("imp_visit_code", models.FloatField(null=True)),
+                ("imp_visit_date", models.DateField(null=True)),
+                ("next_visit_code", models.FloatField(null=True)),
+                ("next_appt_date", models.DateField(null=True)),
+                ("visit_code", models.CharField(max_length=15, null=True)),
+                ("visit_code_sequence", models.IntegerField(null=True)),
+                ("days_since", models.IntegerField(null=True)),
+                ("days_until", models.IntegerField(null=True)),
+                (
+                    "site",
+                    models.ForeignKey(
+                        on_delete=django.db.models.deletion.DO_NOTHING, to="sites.site"
+                    ),
+                ),
+            ],
+            options={
+                "verbose_name": "Last IMP Visit",
+                "verbose_name_plural": "Last IMP Visits",
+                "abstract": False,
+                "default_permissions": ("view", "export", "viewallsites"),
+                "indexes": [
+                    models.Index(
+                        fields=["subject_identifier", "site"],
+                        name="meta_report_subject_4a9e15_idx",
+                    )
+                ],
+            },
+        ),
+    ]

meta_reports/migrations/0053_rename_lastimpvisit_lastimprefill_and_more.py

@@ -0,0 +1,31 @@
+# Generated by Django 5.1.2 on 2024-10-16 01:39
+
+from django.db import migrations
+
+
+class Migration(migrations.Migration):
+
+    dependencies = [
+        ("meta_reports", "0052_lastimpvisit"),
+        ("sites", "0002_alter_domain_unique"),
+    ]
+
+    operations = [
+        migrations.RenameModel(
+            old_name="LastImpVisit",
+            new_name="LastImpRefill",
+        ),
+        migrations.AlterModelOptions(
+            name="lastimprefill",
+            options={
+                "default_permissions": ("view", "export", "viewallsites"),
+                "verbose_name": "Last IMP Refill",
+                "verbose_name_plural": "Last IMP Refills",
+            },
+        ),
+        migrations.RenameIndex(
+            model_name="lastimprefill",
+            new_name="meta_report_subject_bc8268_idx",
+            old_name="meta_report_subject_4a9e15_idx",
+        ),
+    ]

meta_reports/migrations/0054_auto_20250422_2003.py

@@ -0,0 +1,81 @@
+# Generated by Django 6.0 on 2025-04-22 17:03
+
+import django_db_views.migration_functions
+import django_db_views.operations
+from django.db import migrations
+
+
+class Migration(migrations.Migration):
+
+    dependencies = [
+        ("meta_reports", "0053_rename_lastimpvisit_lastimprefill_and_more"),
+    ]
+
+    operations = [
+        django_db_views.operations.ViewRunPython(
+            code=django_db_views.migration_functions.ForwardViewMigration(
+                "select *, uuid() as id, now() as `created`, 'meta_reports.glucosesummaryview' as `report_model` from (SELECT v.subject_identifier, fbg_value, fbg_datetime, NULL AS `ogtt_value`, NULL AS `ogtt_datetime`, CASE WHEN fasting = 'fasting' THEN 'Yes' WHEN fasting = 'non_fasting' THEN 'No' ELSE fasting END AS `fasted`, fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id, eos.offstudy_datetime, fasting_duration_delta FROM meta_subject_glucosefbg AS fbg LEFT JOIN meta_subject_subjectvisit AS v ON v.id = fbg.subject_visit_id LEFT JOIN meta_prn_endofstudy AS eos ON v.subject_identifier = eos.subject_identifier UNION SELECT v.subject_identifier, fbg_value, fbg_datetime, ogtt_value, ogtt_datetime, CASE WHEN fasting = 'fasting' THEN 'Yes' WHEN fasting = 'non_fasting' THEN 'No' ELSE fasting END AS `fasted`, fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id, eos.offstudy_datetime, fasting_duration_delta FROM meta_subject_glucose AS fbg LEFT JOIN meta_subject_subjectvisit AS v ON v.id = fbg.subject_visit_id LEFT JOIN meta_prn_endofstudy AS eos ON v.subject_identifier = eos.subject_identifier) as A ORDER BY subject_identifier, site_id",
+                "meta_reports_glucosesummaryview",
+                engine="django.db.backends.mysql",
+            ),
+            reverse_code=django_db_views.migration_functions.BackwardViewMigration(
+                "", "meta_reports_glucosesummaryview", engine="django.db.backends.mysql"
+            ),
+            atomic=False,
+        ),
+        django_db_views.operations.ViewRunPython(
+            code=django_db_views.migration_functions.ForwardViewMigration(
+                "select *, get_random_uuid() as id, now() as created, 'meta_reports.glucosesummaryview' as report_model from (SELECT v.subject_identifier, fbg_value, fbg_datetime, NULL AS \"ogtt_value\", NULL AS \"ogtt_datetime\", CASE WHEN fasting = 'fasting' THEN 'Yes' WHEN fasting = 'non_fasting' THEN 'No' ELSE fasting END AS \"fasted\", fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id, eos.offstudy_datetime, fasting_duration_delta FROM meta_subject_glucosefbg AS fbg LEFT JOIN meta_subject_subjectvisit AS v ON v.id = fbg.subject_visit_id LEFT JOIN meta_prn_endofstudy AS eos ON v.subject_identifier = eos.subject_identifier UNION SELECT v.subject_identifier, fbg_value, fbg_datetime, ogtt_value, ogtt_datetime, CASE WHEN fasting = 'fasting' THEN 'Yes' WHEN fasting = 'non_fasting' THEN 'No' ELSE fasting END AS \"fasted\", fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id, eos.offstudy_datetime, fasting_duration_delta FROM meta_subject_glucose AS fbg LEFT JOIN meta_subject_subjectvisit AS v ON v.id = fbg.subject_visit_id LEFT JOIN meta_prn_endofstudy AS eos ON v.subject_identifier = eos.subject_identifier) as A ORDER BY subject_identifier, site_id",
+                "meta_reports_glucosesummaryview",
+                engine="django.db.backends.postgresql",
+            ),
+            reverse_code=django_db_views.migration_functions.BackwardViewMigration(
+                "", "meta_reports_glucosesummaryview", engine="django.db.backends.postgresql"
+            ),
+            atomic=False,
+        ),
+        django_db_views.operations.ViewRunPython(
+            code=django_db_views.migration_functions.ForwardViewMigration(
+                "select *, uuid() as id, datetime() as created, 'meta_reports.glucosesummaryview' as report_model from (SELECT v.subject_identifier, fbg_value, fbg_datetime, NULL AS \"ogtt_value\", NULL AS \"ogtt_datetime\", CASE WHEN fasting = 'fasting' THEN 'Yes' WHEN fasting = 'non_fasting' THEN 'No' ELSE fasting END AS \"fasted\", fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id, eos.offstudy_datetime, fasting_duration_delta FROM meta_subject_glucosefbg AS fbg LEFT JOIN meta_subject_subjectvisit AS v ON v.id = fbg.subject_visit_id LEFT JOIN meta_prn_endofstudy AS eos ON v.subject_identifier = eos.subject_identifier UNION SELECT v.subject_identifier, fbg_value, fbg_datetime, ogtt_value, ogtt_datetime, CASE WHEN fasting = 'fasting' THEN 'Yes' WHEN fasting = 'non_fasting' THEN 'No' ELSE fasting END AS \"fasted\", fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id, eos.offstudy_datetime, fasting_duration_delta FROM meta_subject_glucose AS fbg LEFT JOIN meta_subject_subjectvisit AS v ON v.id = fbg.subject_visit_id LEFT JOIN meta_prn_endofstudy AS eos ON v.subject_identifier = eos.subject_identifier) as A ORDER BY subject_identifier, site_id",
+                "meta_reports_glucosesummaryview",
+                engine="django.db.backends.sqlite3",
+            ),
+            reverse_code=django_db_views.migration_functions.BackwardViewMigration(
+                "", "meta_reports_glucosesummaryview", engine="django.db.backends.sqlite3"
+            ),
+            atomic=False,
+        ),
+        django_db_views.operations.ViewDropRunPython(
+            code=django_db_views.migration_functions.DropView(
+                "glucose_summary_view", engine="django.db.backends.mysql"
+            ),
+            reverse_code=django_db_views.migration_functions.BackwardViewMigration(
+                "select *, uuid() as id, now() as `created`, 'meta_reports.glucose_summary_view' as `report_model` from (SELECT v.subject_identifier, fbg_value, fbg_datetime, NULL AS `ogtt_value`, NULL AS `ogtt_datetime`, CASE WHEN fasting = 'fasting' THEN 'Yes' WHEN fasting = 'non_fasting' THEN 'No' ELSE fasting END AS `fasted`, fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id, eos.offstudy_datetime FROM meta_subject_glucosefbg AS fbg LEFT JOIN meta_subject_subjectvisit AS v ON v.id = fbg.subject_visit_id LEFT JOIN meta_prn_endofstudy AS eos ON v.subject_identifier = eos.subject_identifier UNION SELECT v.subject_identifier, fbg_value, fbg_datetime, ogtt_value, ogtt_datetime, CASE WHEN fasting = 'fasting' THEN 'Yes' WHEN fasting = 'non_fasting' THEN 'No' ELSE fasting END AS `fasted`, fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id, eos.offstudy_datetime FROM meta_subject_glucose AS fbg LEFT JOIN meta_subject_subjectvisit AS v ON v.id = fbg.subject_visit_id LEFT JOIN meta_prn_endofstudy AS eos ON v.subject_identifier = eos.subject_identifier) as A ORDER BY subject_identifier, site_id",
+                "glucose_summary_view",
+                engine="django.db.backends.mysql",
+            ),
+            atomic=False,
+        ),
+        django_db_views.operations.ViewDropRunPython(
+            code=django_db_views.migration_functions.DropView(
+                "glucose_summary_view", engine="django.db.backends.postgresql"
+            ),
+            reverse_code=django_db_views.migration_functions.BackwardViewMigration(
+                "select *, get_random_uuid() as id, now() as created, 'meta_reports.glucose_summary_view' as report_model from (SELECT v.subject_identifier, fbg_value, fbg_datetime, NULL AS \"ogtt_value\", NULL AS \"ogtt_datetime\", CASE WHEN fasting = 'fasting' THEN 'Yes' WHEN fasting = 'non_fasting' THEN 'No' ELSE fasting END AS \"fasted\", fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id, eos.offstudy_datetime FROM meta_subject_glucosefbg AS fbg LEFT JOIN meta_subject_subjectvisit AS v ON v.id = fbg.subject_visit_id LEFT JOIN meta_prn_endofstudy AS eos ON v.subject_identifier = eos.subject_identifier UNION SELECT v.subject_identifier, fbg_value, fbg_datetime, ogtt_value, ogtt_datetime, CASE WHEN fasting = 'fasting' THEN 'Yes' WHEN fasting = 'non_fasting' THEN 'No' ELSE fasting END AS \"fasted\", fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id, eos.offstudy_datetime FROM meta_subject_glucose AS fbg LEFT JOIN meta_subject_subjectvisit AS v ON v.id = fbg.subject_visit_id LEFT JOIN meta_prn_endofstudy AS eos ON v.subject_identifier = eos.subject_identifier) as A ORDER BY subject_identifier, site_id",
+                "glucose_summary_view",
+                engine="django.db.backends.postgresql",
+            ),
+            atomic=False,
+        ),
+        django_db_views.operations.ViewDropRunPython(
+            code=django_db_views.migration_functions.DropView(
+                "glucose_summary_view", engine="django.db.backends.sqlite3"
+            ),
+            reverse_code=django_db_views.migration_functions.BackwardViewMigration(
+                "select *, uuid() as id, datetime() as created, 'meta_reports.glucose_summary_view' as report_model from (SELECT v.subject_identifier, fbg_value, fbg_datetime, NULL AS \"ogtt_value\", NULL AS \"ogtt_datetime\", CASE WHEN fasting = 'fasting' THEN 'Yes' WHEN fasting = 'non_fasting' THEN 'No' ELSE fasting END AS \"fasted\", fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id, eos.offstudy_datetime FROM meta_subject_glucosefbg AS fbg LEFT JOIN meta_subject_subjectvisit AS v ON v.id = fbg.subject_visit_id LEFT JOIN meta_prn_endofstudy AS eos ON v.subject_identifier = eos.subject_identifier UNION SELECT v.subject_identifier, fbg_value, fbg_datetime, ogtt_value, ogtt_datetime, CASE WHEN fasting = 'fasting' THEN 'Yes' WHEN fasting = 'non_fasting' THEN 'No' ELSE fasting END AS \"fasted\", fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id, eos.offstudy_datetime FROM meta_subject_glucose AS fbg LEFT JOIN meta_subject_subjectvisit AS v ON v.id = fbg.subject_visit_id LEFT JOIN meta_prn_endofstudy AS eos ON v.subject_identifier = eos.subject_identifier) as A ORDER BY subject_identifier, site_id",
+                "glucose_summary_view",
+                engine="django.db.backends.sqlite3",
+            ),
+            atomic=False,
+        ),
+    ]

meta_reports/migrations/0055_alter_glucosesummary_table.py

@@ -0,0 +1,17 @@
+# Generated by Django 6.0 on 2025-04-22 19:14
+
+from django.db import migrations
+
+
+class Migration(migrations.Migration):
+
+    dependencies = [
+        ("meta_reports", "0054_auto_20250422_2003"),
+    ]
+
+    operations = [
+        migrations.AlterModelTable(
+            name="glucosesummary",
+            table="meta_reports_glucosesummaryview",
+        ),
+    ]

meta_reports/migrations/0056_auto_20250422_2214.py

@@ -0,0 +1,54 @@
+# Generated by Django 6.0 on 2025-04-22 19:14
+
+import django_db_views.migration_functions
+import django_db_views.operations
+from django.db import migrations
+
+
+class Migration(migrations.Migration):
+
+    dependencies = [
+        ("meta_reports", "0055_alter_glucosesummary_table"),
+    ]
+
+    operations = [
+        django_db_views.operations.ViewRunPython(
+            code=django_db_views.migration_functions.ForwardViewMigration(
+                "select *, uuid() as id, now() as `created`, 'meta_reports.glucosesummaryview' as `report_model` from (SELECT v.subject_identifier, fbg_value, fbg_datetime, NULL AS `ogtt_value`, NULL AS `ogtt_datetime`, CASE WHEN fasting = 'fasting' THEN 'Yes' WHEN fasting = 'non_fasting' THEN 'No' ELSE fasting END AS `fasted`, fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id, eos.offstudy_datetime, fasting_duration_delta, 'meta_subject.glucosefbg' AS source FROM meta_subject_glucosefbg AS fbg LEFT JOIN meta_subject_subjectvisit AS v ON v.id = fbg.subject_visit_id LEFT JOIN meta_prn_endofstudy AS eos ON v.subject_identifier = eos.subject_identifier UNION SELECT v.subject_identifier, fbg_value, fbg_datetime, ogtt_value, ogtt_datetime, CASE WHEN fasting = 'fasting' THEN 'Yes' WHEN fasting = 'non_fasting' THEN 'No' ELSE fasting END AS `fasted`, fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id, eos.offstudy_datetime, fasting_duration_delta, 'meta_subject.glucose' AS source FROM meta_subject_glucose AS fbg LEFT JOIN meta_subject_subjectvisit AS v ON v.id = fbg.subject_visit_id LEFT JOIN meta_prn_endofstudy AS eos ON v.subject_identifier = eos.subject_identifier) as A ORDER BY subject_identifier, site_id",
+                "meta_reports_glucosesummaryview",
+                engine="django.db.backends.mysql",
+            ),
+            reverse_code=django_db_views.migration_functions.BackwardViewMigration(
+                "select *, uuid() as id, now() as `created`, 'meta_reports.glucosesummaryview' as `report_model` from (SELECT v.subject_identifier, fbg_value, fbg_datetime, NULL AS `ogtt_value`, NULL AS `ogtt_datetime`, CASE WHEN fasting = 'fasting' THEN 'Yes' WHEN fasting = 'non_fasting' THEN 'No' ELSE fasting END AS `fasted`, fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id, eos.offstudy_datetime, fasting_duration_delta FROM meta_subject_glucosefbg AS fbg LEFT JOIN meta_subject_subjectvisit AS v ON v.id = fbg.subject_visit_id LEFT JOIN meta_prn_endofstudy AS eos ON v.subject_identifier = eos.subject_identifier UNION SELECT v.subject_identifier, fbg_value, fbg_datetime, ogtt_value, ogtt_datetime, CASE WHEN fasting = 'fasting' THEN 'Yes' WHEN fasting = 'non_fasting' THEN 'No' ELSE fasting END AS `fasted`, fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id, eos.offstudy_datetime, fasting_duration_delta FROM meta_subject_glucose AS fbg LEFT JOIN meta_subject_subjectvisit AS v ON v.id = fbg.subject_visit_id LEFT JOIN meta_prn_endofstudy AS eos ON v.subject_identifier = eos.subject_identifier) as A ORDER BY subject_identifier, site_id",
+                "meta_reports_glucosesummaryview",
+                engine="django.db.backends.mysql",
+            ),
+            atomic=False,
+        ),
+        django_db_views.operations.ViewRunPython(
+            code=django_db_views.migration_functions.ForwardViewMigration(
+                "select *, get_random_uuid() as id, now() as created, 'meta_reports.glucosesummaryview' as report_model from (SELECT v.subject_identifier, fbg_value, fbg_datetime, NULL AS \"ogtt_value\", NULL AS \"ogtt_datetime\", CASE WHEN fasting = 'fasting' THEN 'Yes' WHEN fasting = 'non_fasting' THEN 'No' ELSE fasting END AS \"fasted\", fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id, eos.offstudy_datetime, fasting_duration_delta, 'meta_subject.glucosefbg' AS source FROM meta_subject_glucosefbg AS fbg LEFT JOIN meta_subject_subjectvisit AS v ON v.id = fbg.subject_visit_id LEFT JOIN meta_prn_endofstudy AS eos ON v.subject_identifier = eos.subject_identifier UNION SELECT v.subject_identifier, fbg_value, fbg_datetime, ogtt_value, ogtt_datetime, CASE WHEN fasting = 'fasting' THEN 'Yes' WHEN fasting = 'non_fasting' THEN 'No' ELSE fasting END AS \"fasted\", fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id, eos.offstudy_datetime, fasting_duration_delta, 'meta_subject.glucose' AS source FROM meta_subject_glucose AS fbg LEFT JOIN meta_subject_subjectvisit AS v ON v.id = fbg.subject_visit_id LEFT JOIN meta_prn_endofstudy AS eos ON v.subject_identifier = eos.subject_identifier) as A ORDER BY subject_identifier, site_id",
+                "meta_reports_glucosesummaryview",
+                engine="django.db.backends.postgresql",
+            ),
+            reverse_code=django_db_views.migration_functions.BackwardViewMigration(
+                "select *, get_random_uuid() as id, now() as created, 'meta_reports.glucosesummaryview' as report_model from (SELECT v.subject_identifier, fbg_value, fbg_datetime, NULL AS \"ogtt_value\", NULL AS \"ogtt_datetime\", CASE WHEN fasting = 'fasting' THEN 'Yes' WHEN fasting = 'non_fasting' THEN 'No' ELSE fasting END AS \"fasted\", fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id, eos.offstudy_datetime, fasting_duration_delta FROM meta_subject_glucosefbg AS fbg LEFT JOIN meta_subject_subjectvisit AS v ON v.id = fbg.subject_visit_id LEFT JOIN meta_prn_endofstudy AS eos ON v.subject_identifier = eos.subject_identifier UNION SELECT v.subject_identifier, fbg_value, fbg_datetime, ogtt_value, ogtt_datetime, CASE WHEN fasting = 'fasting' THEN 'Yes' WHEN fasting = 'non_fasting' THEN 'No' ELSE fasting END AS \"fasted\", fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id, eos.offstudy_datetime, fasting_duration_delta FROM meta_subject_glucose AS fbg LEFT JOIN meta_subject_subjectvisit AS v ON v.id = fbg.subject_visit_id LEFT JOIN meta_prn_endofstudy AS eos ON v.subject_identifier = eos.subject_identifier) as A ORDER BY subject_identifier, site_id",
+                "meta_reports_glucosesummaryview",
+                engine="django.db.backends.postgresql",
+            ),
+            atomic=False,
+        ),
+        django_db_views.operations.ViewRunPython(
+            code=django_db_views.migration_functions.ForwardViewMigration(
+                "select *, uuid() as id, datetime() as created, 'meta_reports.glucosesummaryview' as report_model from (SELECT v.subject_identifier, fbg_value, fbg_datetime, NULL AS \"ogtt_value\", NULL AS \"ogtt_datetime\", CASE WHEN fasting = 'fasting' THEN 'Yes' WHEN fasting = 'non_fasting' THEN 'No' ELSE fasting END AS \"fasted\", fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id, eos.offstudy_datetime, fasting_duration_delta, 'meta_subject.glucosefbg' AS source FROM meta_subject_glucosefbg AS fbg LEFT JOIN meta_subject_subjectvisit AS v ON v.id = fbg.subject_visit_id LEFT JOIN meta_prn_endofstudy AS eos ON v.subject_identifier = eos.subject_identifier UNION SELECT v.subject_identifier, fbg_value, fbg_datetime, ogtt_value, ogtt_datetime, CASE WHEN fasting = 'fasting' THEN 'Yes' WHEN fasting = 'non_fasting' THEN 'No' ELSE fasting END AS \"fasted\", fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id, eos.offstudy_datetime, fasting_duration_delta, 'meta_subject.glucose' AS source FROM meta_subject_glucose AS fbg LEFT JOIN meta_subject_subjectvisit AS v ON v.id = fbg.subject_visit_id LEFT JOIN meta_prn_endofstudy AS eos ON v.subject_identifier = eos.subject_identifier) as A ORDER BY subject_identifier, site_id",
+                "meta_reports_glucosesummaryview",
+                engine="django.db.backends.sqlite3",
+            ),
+            reverse_code=django_db_views.migration_functions.BackwardViewMigration(
+                "select *, uuid() as id, datetime() as created, 'meta_reports.glucosesummaryview' as report_model from (SELECT v.subject_identifier, fbg_value, fbg_datetime, NULL AS \"ogtt_value\", NULL AS \"ogtt_datetime\", CASE WHEN fasting = 'fasting' THEN 'Yes' WHEN fasting = 'non_fasting' THEN 'No' ELSE fasting END AS \"fasted\", fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id, eos.offstudy_datetime, fasting_duration_delta FROM meta_subject_glucosefbg AS fbg LEFT JOIN meta_subject_subjectvisit AS v ON v.id = fbg.subject_visit_id LEFT JOIN meta_prn_endofstudy AS eos ON v.subject_identifier = eos.subject_identifier UNION SELECT v.subject_identifier, fbg_value, fbg_datetime, ogtt_value, ogtt_datetime, CASE WHEN fasting = 'fasting' THEN 'Yes' WHEN fasting = 'non_fasting' THEN 'No' ELSE fasting END AS \"fasted\", fbg.site_id, v.visit_code, v.visit_code_sequence, v.appointment_id, eos.offstudy_datetime, fasting_duration_delta FROM meta_subject_glucose AS fbg LEFT JOIN meta_subject_subjectvisit AS v ON v.id = fbg.subject_visit_id LEFT JOIN meta_prn_endofstudy AS eos ON v.subject_identifier = eos.subject_identifier) as A ORDER BY subject_identifier, site_id",
+                "meta_reports_glucosesummaryview",
+                engine="django.db.backends.sqlite3",
+            ),
+            atomic=False,
+        ),
+    ]