meta-edc 0.2.24__py3-none-any.whl → 1.4.0__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (1169) hide show
  1. meta_ae/action_items.py +40 -29
  2. meta_ae/admin/__init__.py +12 -2
  3. meta_ae/admin/ae_followup_admin.py +2 -2
  4. meta_ae/admin/ae_initial_admin.py +7 -4
  5. meta_ae/admin/ae_local_review_admin.py +2 -2
  6. meta_ae/admin/ae_sponsor_review_admin.py +2 -2
  7. meta_ae/admin/ae_susar_admin.py +3 -3
  8. meta_ae/admin/ae_tmg_admin.py +2 -2
  9. meta_ae/admin/death_report_admin.py +3 -3
  10. meta_ae/admin/death_report_tmg_admin.py +4 -2
  11. meta_ae/admin/death_report_tmg_second_admin.py +4 -2
  12. meta_ae/admin/hospitalization_admin.py +15 -0
  13. meta_ae/admin/modeladmin_mixins.py +14 -16
  14. meta_ae/baker_recipes.py +5 -6
  15. meta_ae/choices.py +1 -1
  16. meta_ae/forms/__init__.py +14 -0
  17. meta_ae/forms/death_report_form.py +1 -2
  18. meta_ae/forms/hospitalization_form.py +11 -0
  19. meta_ae/forms/modelform_mixins.py +2 -2
  20. meta_ae/list_data.py +2 -1
  21. meta_ae/migrations/0001_initial.py +27 -28
  22. meta_ae/migrations/0002_auto_20191024_1000.py +0 -1
  23. meta_ae/migrations/0003_auto_20191102_0033.py +0 -1
  24. meta_ae/migrations/0004_auto_20191114_0821.py +0 -1
  25. meta_ae/migrations/0005_auto_20210624_0225.py +0 -1
  26. meta_ae/migrations/0006_aelocalreview_aesponsorreview.py +5 -6
  27. meta_ae/migrations/0007_auto_20210911_2036.py +0 -1
  28. meta_ae/migrations/0008_auto_20211011_1657.py +0 -1
  29. meta_ae/migrations/0009_auto_20220307_1929.py +0 -1
  30. meta_ae/migrations/0010_auto_20220704_1841.py +0 -1
  31. meta_ae/migrations/0011_alter_aefollowup_action_identifier_and_more.py +0 -1
  32. meta_ae/migrations/0012_auto_20220826_0258.py +0 -1
  33. meta_ae/migrations/0013_auto_20220826_0322.py +0 -1
  34. meta_ae/migrations/0014_auto_20220826_0406.py +0 -1
  35. meta_ae/migrations/0015_auto_20220907_0157.py +0 -1
  36. meta_ae/migrations/0016_rename_narrative_aetmg_investigator_narrative_and_more.py +128 -0
  37. meta_ae/migrations/0017_auto_20221130_2257.py +29 -0
  38. meta_ae/migrations/0018_alter_deathreporttmg_cause_of_death_agreed_and_more.py +45 -0
  39. meta_ae/migrations/0019_alter_aefollowup_managers_alter_aeinitial_managers_and_more.py +529 -0
  40. meta_ae/migrations/0020_alter_aesusar_options_alter_aetmg_options_and_more.py +532 -0
  41. meta_ae/migrations/0021_alter_aefollowup_site_alter_aeinitial_site_and_more.py +158 -0
  42. meta_ae/migrations/0022_historicalhospitalization_hospitalization.py +590 -0
  43. meta_ae/migrations/0023_alter_aefollowup_action_identifier_and_more.py +2017 -0
  44. meta_ae/model_mixins/__init__.py +2 -0
  45. meta_ae/model_mixins/ae_review_model_mixin.py +8 -8
  46. meta_ae/model_mixins/death_report_model_mixin.py +3 -4
  47. meta_ae/models/__init__.py +14 -0
  48. meta_ae/models/ae_initial.py +4 -0
  49. meta_ae/models/death_report.py +0 -1
  50. meta_ae/models/death_report_tmg_second.py +0 -1
  51. meta_ae/models/hospitalization.py +21 -0
  52. meta_ae/models/managers.py +1 -4
  53. meta_ae/pdf_reports/__init__.py +4 -2
  54. meta_ae/pdf_reports/ae_pdf_report.py +7 -0
  55. meta_ae/pdf_reports/death_pdf_report.py +7 -0
  56. meta_ae/pdf_reports/meta_pdf_report_mixin.py +4 -2
  57. meta_ae/templatetags/meta_ae_extras.py +5 -6
  58. meta_analytics/.DS_Store +0 -0
  59. meta_analytics/README.rst +16 -0
  60. meta_analytics/dataframes/__init__.py +46 -0
  61. meta_analytics/dataframes/constants.py +36 -0
  62. meta_analytics/dataframes/get_eos_df.py +38 -0
  63. meta_analytics/dataframes/get_glucose_df.py +166 -0
  64. meta_analytics/dataframes/get_glucose_fbg_df.py +26 -0
  65. meta_analytics/dataframes/get_glucose_fbg_ogtt_df.py +21 -0
  66. meta_analytics/dataframes/get_last_imp_visits_df.py +103 -0
  67. meta_analytics/dataframes/glucose_endpoints/__init__.py +4 -0
  68. meta_analytics/dataframes/glucose_endpoints/endpoint_by_date.py +184 -0
  69. meta_analytics/dataframes/glucose_endpoints/glucose_endpoints_by_date.py +407 -0
  70. meta_analytics/dataframes/screening/__init__.py +4 -0
  71. meta_analytics/dataframes/screening/get_glucose_tested_only_df.py +19 -0
  72. meta_analytics/dataframes/screening/get_screening_df.py +156 -0
  73. meta_analytics/dataframes/utils.py +74 -0
  74. meta_analytics/get_tables.py +80 -0
  75. meta_analytics/tables/__init__.py +4 -0
  76. meta_analytics/tables/eligible.py +106 -0
  77. meta_analytics/tables/enrolled/glucose.py +27 -0
  78. meta_analytics/tables/has_dm.py +61 -0
  79. meta_analytics/utils.py +81 -0
  80. meta_auth/auth_objects.py +34 -5
  81. meta_auth/auths.py +21 -6
  82. meta_consent/action_items.py +22 -3
  83. meta_consent/admin/__init__.py +8 -1
  84. meta_consent/admin/actions/__init__.py +2 -0
  85. meta_consent/admin/actions/create_missing_prescriptions.py +2 -2
  86. meta_consent/admin/list_filters.py +22 -0
  87. meta_consent/admin/modeladmin_mixins.py +148 -0
  88. meta_consent/admin/subject_consent_admin.py +6 -134
  89. meta_consent/admin/subject_consent_v1_admin.py +19 -0
  90. meta_consent/admin/subject_consent_v1_ext_admin.py +93 -0
  91. meta_consent/baker_recipes.py +11 -11
  92. meta_consent/consents.py +27 -8
  93. meta_consent/constants.py +1 -0
  94. meta_consent/form_validators/__init__.py +3 -0
  95. meta_consent/form_validators/subject_consent_form_validator.py +30 -0
  96. meta_consent/forms/__init__.py +10 -1
  97. meta_consent/forms/subject_consent_form.py +26 -46
  98. meta_consent/forms/subject_consent_v1_ext_form.py +47 -0
  99. meta_consent/forms/subject_consent_v1_form.py +26 -0
  100. meta_consent/forms/subject_reconsent_form.py +4 -4
  101. meta_consent/locale/lg/LC_MESSAGES/django.po +69 -0
  102. meta_consent/locale/sw/LC_MESSAGES/django.po +70 -0
  103. meta_consent/management/commands/create_missing_prescriptions.py +5 -3
  104. meta_consent/migrations/0001_initial.py +9 -10
  105. meta_consent/migrations/0002_auto_20191024_1000.py +0 -1
  106. meta_consent/migrations/0003_auto_20200325_0901.py +0 -1
  107. meta_consent/migrations/0004_auto_20210624_0225.py +0 -1
  108. meta_consent/migrations/0005_alter_subjectconsent_options.py +0 -1
  109. meta_consent/migrations/0006_auto_20210911_2036.py +0 -1
  110. meta_consent/migrations/0007_auto_20220128_1719.py +0 -1
  111. meta_consent/migrations/0008_auto_20220412_2151.py +0 -1
  112. meta_consent/migrations/0009_auto_20220704_1841.py +0 -1
  113. meta_consent/migrations/0010_alter_historicalsubjectreconsent_action_identifier_and_more.py +0 -1
  114. meta_consent/migrations/0011_auto_20220826_0258.py +0 -1
  115. meta_consent/migrations/0012_auto_20220826_0322.py +0 -1
  116. meta_consent/migrations/0013_auto_20220826_0406.py +0 -1
  117. meta_consent/migrations/0014_alter_subjectconsent_managers.py +1 -2
  118. meta_consent/migrations/0015_auto_20220914_0542.py +0 -1
  119. meta_consent/migrations/0016_auto_20220914_0547.py +0 -2
  120. meta_consent/migrations/0017_auto_20220929_1742.py +3 -3
  121. meta_consent/migrations/0018_alter_subjectconsent_options_and_more.py +170 -0
  122. meta_consent/migrations/0019_alter_subjectconsent_options_and_more.py +191 -0
  123. meta_consent/migrations/0020_historicalsubjectconsent_model_name_and_more.py +34 -0
  124. meta_consent/migrations/0021_auto_20240111_0442.py +17 -0
  125. meta_consent/migrations/0022_alter_historicalsubjectconsent_site_and_more.py +36 -0
  126. meta_consent/migrations/0023_subjectconsentv1_and_more.py +86 -0
  127. meta_consent/migrations/0024_historicalsubjectconsentv1.py +595 -0
  128. meta_consent/migrations/0025_alter_historicalsubjectconsent_first_name_and_more.py +151 -0
  129. meta_consent/migrations/0026_historicalsubjectconsentv1ext_subjectconsentv1ext.py +535 -0
  130. meta_consent/migrations/0027_auto_20250111_0344.py +30 -0
  131. meta_consent/migrations/0028_historicalsubjectconsentv1ext_assessment_score_and_more.py +162 -0
  132. meta_consent/migrations/0029_alter_historicalsubjectconsentv1ext_agrees_to_extension_and_more.py +33 -0
  133. meta_consent/migrations/0030_auto_20250120_2114.py +40 -0
  134. meta_consent/migrations/0031_alter_historicalsubjectconsent_guardian_name_and_more.py +124 -0
  135. meta_consent/migrations/0032_alter_historicalsubjectconsent_device_created_and_more.py +678 -0
  136. meta_consent/migrations/0033_historicalsubjectconsentspfq_subjectconsentspfq.py +615 -0
  137. meta_consent/migrations/0034_remove_subjectconsentspfq_site_and_more.py +23 -0
  138. meta_consent/migrations/0035_alter_historicalsubjectconsent_consent_definition_name_and_more.py +43 -0
  139. meta_consent/models/__init__.py +11 -0
  140. meta_consent/models/model_mixins.py +1 -2
  141. meta_consent/models/signals.py +68 -52
  142. meta_consent/models/subject_consent.py +9 -20
  143. meta_consent/models/subject_consent_v1.py +15 -0
  144. meta_consent/models/subject_consent_v1_ext.py +34 -0
  145. meta_consent/models/subject_reconsent.py +6 -7
  146. meta_dashboard/apps.py +0 -40
  147. meta_dashboard/locale/lg/LC_MESSAGES/django.po +30 -0
  148. meta_dashboard/locale/sw/LC_MESSAGES/django.po +31 -0
  149. meta_dashboard/navbars.py +12 -14
  150. meta_dashboard/patterns.py +1 -1
  151. meta_dashboard/templates/meta_dashboard/{bootstrap3/buttons → buttons}/dashboard_button.html +1 -1
  152. meta_dashboard/templates/meta_dashboard/{bootstrap3/buttons → buttons}/eligibility_button.html +1 -1
  153. meta_dashboard/templates/meta_dashboard/{bootstrap3/buttons → buttons}/screening_button.html +1 -1
  154. meta_dashboard/templates/meta_dashboard/{bootstrap3/screening → screening}/listboard.html +18 -17
  155. meta_dashboard/templates/meta_dashboard/subject/dashboard/sidebar.html +24 -0
  156. meta_dashboard/templates/meta_dashboard/{bootstrap3/subject → subject}/dashboard/top_bar.html +1 -1
  157. meta_dashboard/templates/meta_dashboard/subject/dashboard.html +14 -0
  158. meta_dashboard/templates/meta_dashboard/{bootstrap3/subject → subject}/listboard.html +14 -6
  159. meta_dashboard/templatetags/meta_dashboard_extras.py +77 -78
  160. meta_dashboard/urls.py +10 -10
  161. meta_dashboard/view_utils/__init__.py +13 -0
  162. meta_dashboard/view_utils/subject_screening_button.py +114 -0
  163. meta_dashboard/views/__init__.py +8 -0
  164. meta_dashboard/views/ae/__init__.py +2 -0
  165. meta_dashboard/views/ae/ae_listboard_view.py +3 -4
  166. meta_dashboard/views/ae/death_report_listboard_view.py +4 -4
  167. meta_dashboard/views/screening/__init__.py +2 -0
  168. meta_dashboard/views/screening/listboard_view.py +5 -16
  169. meta_dashboard/views/subject/__init__.py +2 -0
  170. meta_dashboard/views/subject/dashboard/__init__.py +2 -0
  171. meta_dashboard/views/subject/dashboard/dashboard_view.py +41 -3
  172. meta_dashboard/views/subject/listboard/__init__.py +2 -0
  173. meta_dashboard/views/subject/listboard/listboard_view.py +8 -12
  174. meta_data_manager/handlers.py +0 -1
  175. meta_edc/__init__.py +10 -0
  176. meta_edc/admin.py +3 -4
  177. meta_edc/celery.py +6 -14
  178. meta_edc/celery_live.py +19 -0
  179. meta_edc/celery_uat.py +25 -0
  180. meta_edc/management/commands/update_forms_reference.py +16 -17
  181. meta_edc/meta_version.py +2 -2
  182. meta_edc/navbars.py +17 -12
  183. meta_edc/settings/debug.py +30 -9
  184. meta_edc/settings/defaults.py +145 -94
  185. meta_edc/settings/live.py +5 -10
  186. meta_edc/settings/logging.py +10 -3
  187. meta_edc/settings/minimal.py +5 -5
  188. meta_edc/settings/uat.py +4 -13
  189. meta_edc/templates/meta_edc/{bootstrap3/base.html → base.html} +1 -1
  190. meta_edc/templates/meta_edc/{bootstrap3/home.html → home.html} +14 -8
  191. meta_edc/urls.py +10 -4
  192. meta_edc/utils.py +3 -1
  193. meta_edc/views/__init__.py +2 -0
  194. meta_edc/views/home_view.py +6 -7
  195. meta_edc/wsgi.py +1 -1
  196. meta_edc/wsgi_live.py +1 -1
  197. meta_edc/wsgi_uat.py +1 -1
  198. meta_edc-1.4.0.dist-info/METADATA +174 -0
  199. meta_edc-1.4.0.dist-info/RECORD +1164 -0
  200. meta_edc-1.4.0.dist-info/WHEEL +4 -0
  201. meta_labs/list_data.py +2 -2
  202. meta_labs/reportables.py +80 -11
  203. meta_lists/admin.py +30 -0
  204. meta_lists/list_data.py +60 -5
  205. meta_lists/migrations/0001_initial.py +0 -1
  206. meta_lists/migrations/0002_auto_20191026_2231.py +0 -1
  207. meta_lists/migrations/0003_auto_20191102_0033.py +0 -1
  208. meta_lists/migrations/0004_auto_20191102_1859.py +0 -1
  209. meta_lists/migrations/0005_auto_20191104_0930.py +0 -1
  210. meta_lists/migrations/0006_auto_20200514_1959.py +0 -1
  211. meta_lists/migrations/0007_auto_20200516_2356.py +0 -1
  212. meta_lists/migrations/0008_auto_20200528_1517.py +3 -4
  213. meta_lists/migrations/0009_auto_20200613_2041.py +0 -1
  214. meta_lists/migrations/0010_auto_20200617_1738.py +0 -1
  215. meta_lists/migrations/0011_auto_20210624_0225.py +0 -1
  216. meta_lists/migrations/0012_auto_20210728_1809.py +0 -1
  217. meta_lists/migrations/0013_transferreasons_and_more.py +0 -1
  218. meta_lists/migrations/0014_auto_20220913_2139.py +0 -1
  219. meta_lists/migrations/0015_abnormalfootappearanceobservations_extra_value_and_more.py +67 -0
  220. meta_lists/migrations/0016_alter_abnormalfootappearanceobservations_options_and_more.py +617 -0
  221. meta_lists/migrations/0017_complications_dmmedications_dmtreatments_and_more.py +365 -0
  222. meta_lists/migrations/0018_missedreferralreasons.py +73 -0
  223. meta_lists/migrations/0019_auto_20250128_0143.py +48 -0
  224. meta_lists/migrations/0020_alter_abnormalfootappearanceobservations_extra_value_and_more.py +404 -0
  225. meta_lists/models.py +36 -0
  226. meta_pharmacy/admin/__init__.py +7 -0
  227. meta_pharmacy/admin/rx_admin.py +76 -0
  228. meta_pharmacy/admin/substitutions_admin.py +67 -0
  229. meta_pharmacy/admin_site.py +9 -0
  230. meta_pharmacy/apps.py +5 -0
  231. meta_pharmacy/constants.py +10 -0
  232. meta_pharmacy/forms/__init__.py +4 -0
  233. meta_pharmacy/forms/rx_form.py +15 -0
  234. meta_pharmacy/forms/substitutions_form.py +56 -0
  235. meta_pharmacy/label_configs.py +30 -0
  236. meta_pharmacy/labels/__init__.py +7 -0
  237. meta_pharmacy/labels/draw_label_for_subject_with_barcode.py +61 -0
  238. meta_pharmacy/labels/draw_label_for_subject_with_code128.py +14 -0
  239. meta_pharmacy/labels/draw_label_with_test_data.py +26 -0
  240. meta_pharmacy/labels/label_data.py +13 -0
  241. meta_pharmacy/labels/print_sheets.py +95 -0
  242. meta_pharmacy/list_data.py +8 -0
  243. meta_pharmacy/management/commands/update_initial_pharmacy_data.py +11 -0
  244. meta_pharmacy/migrations/0001_initial.py +32 -0
  245. meta_pharmacy/migrations/0002_initial.py +682 -0
  246. meta_pharmacy/migrations/0003_auto_20240909_2335.py +65 -0
  247. meta_pharmacy/migrations/0004_alter_historicalsubstitutions_report_datetime_and_more.py +23 -0
  248. meta_pharmacy/migrations/0005_auto_20240911_0352.py +17 -0
  249. meta_pharmacy/migrations/0006_lotnumber_label.py +280 -0
  250. meta_pharmacy/migrations/0007_lotnumber_medication.py +24 -0
  251. meta_pharmacy/migrations/0008_remove_lotnumber_medication_and_more.py +389 -0
  252. meta_pharmacy/migrations/0009_remove_historicalrx_slug.py +17 -0
  253. meta_pharmacy/migrations/0010_alter_historicallabeldata_device_created_and_more.py +382 -0
  254. meta_pharmacy/models/__init__.py +10 -0
  255. meta_pharmacy/models/label_data.py +37 -0
  256. meta_pharmacy/models/rx.py +18 -0
  257. meta_pharmacy/models/rx_label.py +38 -0
  258. meta_pharmacy/models/substitutions.py +88 -0
  259. meta_pharmacy/prepare_meta_pharmacy.py +1 -1
  260. meta_pharmacy/urls.py +8 -0
  261. meta_pharmacy/utils/__init__.py +3 -0
  262. meta_pharmacy/utils/update_initial_pharmacy_data.py +146 -0
  263. meta_prn/action_items.py +76 -27
  264. meta_prn/admin/__init__.py +20 -1
  265. meta_prn/admin/dm_referral_admin.py +50 -0
  266. meta_prn/admin/end_of_study_admin.py +28 -18
  267. meta_prn/admin/loss_to_followup_admin.py +5 -5
  268. meta_prn/admin/off_study_medication_admin.py +7 -9
  269. meta_prn/admin/offschedule_admin.py +14 -14
  270. meta_prn/admin/offschedule_dm_referral_admin.py +48 -0
  271. meta_prn/admin/offschedule_postnatal_admin.py +17 -10
  272. meta_prn/admin/offschedule_pregnancy_admin.py +20 -12
  273. meta_prn/admin/onschedule_admin.py +9 -11
  274. meta_prn/admin/onschedule_dm_referral_admin.py +38 -0
  275. meta_prn/admin/pregnancy_notification_admin.py +13 -11
  276. meta_prn/admin/protocol_incident_admin.py +6 -104
  277. meta_prn/admin/subject_transfer_admin.py +3 -2
  278. meta_prn/baker_recipes.py +15 -8
  279. meta_prn/choices.py +15 -10
  280. meta_prn/constants.py +5 -2
  281. meta_prn/form_validators/__init__.py +5 -0
  282. meta_prn/form_validators/end_of_study.py +65 -21
  283. meta_prn/form_validators/protocol_incident.py +1 -2
  284. meta_prn/forms/__init__.py +15 -0
  285. meta_prn/forms/dm_referral_form.py +34 -0
  286. meta_prn/forms/end_of_study_form.py +1 -2
  287. meta_prn/forms/loss_to_followup_form.py +1 -2
  288. meta_prn/forms/off_study_medication_form.py +2 -3
  289. meta_prn/forms/offschedule_dm_referral_form.py +35 -0
  290. meta_prn/forms/offschedule_form.py +31 -1
  291. meta_prn/forms/offschedule_pregnancy_form.py +0 -1
  292. meta_prn/forms/pregnancy_notification_form.py +16 -19
  293. meta_prn/forms/subject_transfer_form.py +0 -1
  294. meta_prn/list_data.py +3 -3
  295. meta_prn/migrations/0001_initial.py +25 -26
  296. meta_prn/migrations/0002_auto_20191024_1000.py +0 -1
  297. meta_prn/migrations/0003_auto_20200120_2020.py +0 -1
  298. meta_prn/migrations/0004_auto_20200403_0332.py +0 -1
  299. meta_prn/migrations/0005_auto_20200524_1944.py +0 -1
  300. meta_prn/migrations/0006_auto_20210624_0225.py +0 -1
  301. meta_prn/migrations/0007_auto_20210721_0335.py +0 -1
  302. meta_prn/migrations/0008_auto_20210910_0238.py +0 -1
  303. meta_prn/migrations/0009_auto_20210910_0239.py +0 -1
  304. meta_prn/migrations/0010_auto_20210910_1906.py +0 -1
  305. meta_prn/migrations/0011_auto_20210910_1911.py +1 -2
  306. meta_prn/migrations/0012_auto_20210911_0004.py +1 -2
  307. meta_prn/migrations/0013_auto_20210911_2036.py +0 -1
  308. meta_prn/migrations/0014_auto_20211003_1709.py +0 -1
  309. meta_prn/migrations/0015_auto_20211104_1447.py +0 -1
  310. meta_prn/migrations/0016_auto_20220128_1719.py +0 -1
  311. meta_prn/migrations/0017_auto_20220307_1929.py +5 -6
  312. meta_prn/migrations/0018_auto_20220309_2106.py +9 -10
  313. meta_prn/migrations/0019_auto_20220309_2230.py +0 -1
  314. meta_prn/migrations/0020_auto_20220310_0439.py +0 -1
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  598. meta_screening/migrations/0046_historicalscreeningpartone_hba1c_datetime_and_more.py +0 -1
  599. meta_screening/migrations/0047_historicalscreeningpartone_appt_datetime_repeat_and_more.py +0 -1
  600. meta_screening/migrations/0048_rename_appt_datetime_repeat_historicalscreeningpartone_repeat_appt_datetime_and_more.py +0 -1
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  602. meta_screening/migrations/0050_historicalscreeningpartone_agree_to_p3_and_more.py +0 -1
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  616. meta_screening/migrations/0064_remove_historicalscreeningpartone_fasting_duration_minutes_and_more.py +126 -0
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  623. meta_screening/model_mixins/creatinine_fields_model_mixin.py +2 -4
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  626. meta_screening/model_mixins/part_three_fields_model_mixin.py +19 -33
  627. meta_screening/model_mixins/part_two_fields_model_mixin.py +19 -18
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  630. meta_screening/models/proxy_models.py +9 -1
  631. meta_screening/models/signals.py +10 -11
  632. meta_screening/models/subject_refusal.py +5 -5
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  640. meta_subject/admin/blood_results/__init__.py +10 -2
  641. meta_subject/admin/blood_results/blood_results_fbc_admin.py +6 -3
  642. meta_subject/admin/blood_results/blood_results_hba1c_admin.py +6 -3
  643. meta_subject/admin/blood_results/blood_results_ins_admin.py +6 -3
  644. meta_subject/admin/blood_results/blood_results_lft_admin.py +6 -3
  645. meta_subject/admin/blood_results/blood_results_lipids_admin.py +24 -0
  646. meta_subject/admin/blood_results/blood_results_rft_admin.py +8 -8
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  654. meta_subject/admin/egfr_drop_notification_admin.py +1 -4
  655. meta_subject/admin/eq5d3l_admin.py +4 -4
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  657. meta_subject/admin/fieldsets.py +5 -5
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  659. meta_subject/admin/followup_vitals_admin.py +31 -7
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  662. meta_subject/admin/health_economics/__init__.py +4 -0
  663. meta_subject/admin/{health_economics_simple_admin.py → health_economics/health_economics_simple_admin.py} +7 -7
  664. meta_subject/admin/health_economics/health_economics_update_admin.py +101 -0
  665. meta_subject/admin/hepatitis_test_admin.py +4 -4
  666. meta_subject/admin/hiv_exit_review_admin.py +55 -0
  667. meta_subject/admin/list_filters.py +76 -0
  668. meta_subject/admin/malaria_test_admin.py +4 -29
  669. meta_subject/admin/medication_adherence_admin.py +5 -10
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  671. meta_subject/admin/modeladmin.py +9 -8
  672. meta_subject/admin/next_appointment_admin.py +19 -0
  673. meta_subject/admin/other_arv_regimens_admin.py +10 -14
  674. meta_subject/admin/patient_history_admin.py +7 -7
  675. meta_subject/admin/physical_exam_admin.py +4 -4
  676. meta_subject/admin/pregnancy_update_admin.py +4 -4
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  678. meta_subject/admin/study_medication_admin.py +56 -11
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  682. meta_subject/admin/urine_dipstick_test_admin.py +4 -4
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  690. meta_subject/form_validators/delivery_form_validator.py +83 -0
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  706. meta_subject/forms/blood_results/blood_results_lft_form.py +0 -1
  707. meta_subject/forms/blood_results/{blood_results_lipid_form.py → blood_results_lipids_form.py} +5 -6
  708. meta_subject/forms/blood_results/blood_results_rft_form.py +60 -5
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  710. meta_subject/forms/concomitant_medication_form.py +1 -7
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  885. meta_subject/migrations/0136_egfrdropnotification_creatinine_quantifier_and_more.py +0 -1
  886. meta_subject/migrations/0137_alter_egfrdropnotification_egfr_percent_change_and_more.py +0 -1
  887. meta_subject/migrations/0138_alter_glucose_fbg_datetime_and_more.py +0 -1
  888. meta_subject/migrations/0139_alter_bloodresultsins_ins_units_and_more.py +0 -1
  889. meta_subject/migrations/0140_alter_bloodresultsfbc_action_identifier_and_more.py +0 -1
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  906. meta_subject/migrations/0157_remove_bloodresultsfbc_crf_status_and_more.py +512 -0
  907. meta_subject/migrations/0158_alter_followupexamination_attended_clinic_and_more.py +52 -0
  908. meta_subject/migrations/0159_alter_bloodresultsfbc_results_abnormal_and_more.py +152 -0
  909. meta_subject/migrations/0160_alter_healtheconomicssimple_education_certificate_and_more.py +44 -0
  910. meta_subject/migrations/0161_alter_birthoutcomes_options_and_more.py +3307 -0
  911. meta_subject/migrations/0162_alter_followupexamination_abdominal_tenderness_and_more.py +66 -0
  912. meta_subject/migrations/0163_alter_birthoutcomes_options_and_more.py +3470 -0
  913. meta_subject/migrations/0164_dmreferralfollowup_historicaldmreferralfollowup.py +709 -0
  914. meta_subject/migrations/0165_alter_dmreferralfollowup_healthcare_workers.py +22 -0
  915. meta_subject/migrations/0166_rename_dm_medications_other_dmreferralfollowup_other_dm_medications_and_more.py +184 -0
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  917. meta_subject/migrations/0168_alter_dmreferralfollowup_last_missed_pill_and_more.py +53 -0
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  919. meta_subject/migrations/0170_remove_glucose_repeat_fbg_and_more.py +52 -0
  920. meta_subject/migrations/0171_alter_glucose_endpoint_today_and_more.py +80 -0
  921. meta_subject/migrations/0172_remove_historicalbloodresultsglu_action_item_and_more.py +67 -0
  922. meta_subject/migrations/0173_alter_glucosefbg_options_and_more.py +117 -0
  923. meta_subject/migrations/0174_remove_glucosefbg_glucose_abnormal_and_more.py +105 -0
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  925. meta_subject/migrations/0176_alter_glucosefbg_glucose_value_and_more.py +44 -0
  926. meta_subject/migrations/0177_alter_bloodresultslft_alp_value_and_more.py +91 -0
  927. meta_subject/migrations/0178_historicalhealtheconomicsupdate_and_more.py +719 -0
  928. meta_subject/migrations/0179_alter_birthoutcomes_consent_model_and_more.py +835 -0
  929. meta_subject/migrations/0180_dmreferralfollowup_missed_referral_reasons_and_more.py +62 -0
  930. meta_subject/migrations/0181_dmreferralfollowup_action_identifier_and_more.py +143 -0
  931. meta_subject/migrations/0182_rename_dmreferralfollowup_dmfollowup_and_more.py +54 -0
  932. meta_subject/migrations/0183_alter_dmfollowup_on_dm_medications_and_more.py +31 -0
  933. meta_subject/migrations/0184_alter_glucose_options_and_more.py +31 -0
  934. meta_subject/migrations/0185_alter_bloodresultsins_fasting_duration_str_and_more.py +82 -0
  935. meta_subject/migrations/0186_healtheconomicsupdate_singleton_field_and_more.py +54 -0
  936. meta_subject/migrations/0187_dmdiagnosis_historicaldmdiagnosis_dmdxresult_and_more.py +442 -0
  937. meta_subject/migrations/0188_historicaldmdxresult_dmdxresult.py +394 -0
  938. meta_subject/migrations/0189_alter_dmdxresult_options_and_more.py +116 -0
  939. meta_subject/migrations/0190_dmdiagnosis_dx_no_tmg_reason_and_more.py +65 -0
  940. meta_subject/migrations/0191_alter_dmdiagnosis_dx_no_tmg_reason_and_more.py +70 -0
  941. meta_subject/migrations/0192_rename_glucose_quantifier_glucosefbg_fbg_quantifier_and_more.py +44 -0
  942. meta_subject/migrations/0193_alter_glucosefbg_fbg_value_and_more.py +44 -0
  943. meta_subject/migrations/0194_remove_glucosefbg_assay_datetime_and_more.py +166 -0
  944. meta_subject/migrations/0195_alter_glucosefbg_fbg_datetime_and_more.py +27 -0
  945. meta_subject/migrations/0196_glucosefbg_fbg_not_performed_reason_and_more.py +49 -0
  946. meta_subject/migrations/0197_glucosefbg_fasting_duration_estimated_and_more.py +33 -0
  947. meta_subject/migrations/0198_alter_glucosefbg_fasting_duration_estimated_and_more.py +33 -0
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  949. meta_subject/migrations/0200_rename_fasting_duration_minutes_bloodresultsins_fasting_duration_delta_and_more.py +43 -0
  950. meta_subject/migrations/0201_alter_bloodresultsins_fasting_duration_delta_and_more.py +58 -0
  951. meta_subject/migrations/0202_auto_20240516_0315.py +32 -0
  952. meta_subject/migrations/0203_alter_bloodresultsins_fasting_duration_delta_and_more.py +67 -0
  953. meta_subject/migrations/0204_glucosefbg_repeat_fbg_date_and_more.py +27 -0
  954. meta_subject/migrations/0205_historicalsubjectrequisition_crf_status_and_more.py +80 -0
  955. meta_subject/migrations/0206_bloodresultsfbc_crf_status_and_more.py +62 -0
  956. meta_subject/migrations/0207_alter_historicalphysicalexam_waist_circumference_and_more.py +46 -0
  957. meta_subject/migrations/0208_birthoutcomes_crf_status_and_more.py +62 -0
  958. meta_subject/migrations/0209_remove_historicaldmdxresult_dm_diagnosis_and_more.py +36 -0
  959. meta_subject/migrations/0210_remove_dmdxresult_dm_diagnosis_and_more.py +123 -0
  960. meta_subject/migrations/0211_dmendpoint_endpoint_reached_and_more.py +45 -0
  961. meta_subject/migrations/0212_auto_20240827_2222.py +23 -0
  962. meta_subject/migrations/0213_rename_bloodresultslipid_bloodresultslipids_and_more.py +35 -0
  963. meta_subject/migrations/0214_historicalstudymedication_stock_codes_and_more.py +44 -0
  964. meta_subject/migrations/0215_alter_historicalstudymedication_stock_codes_and_more.py +46 -0
  965. meta_subject/migrations/0216_historicalnextappointment_nextappointment.py +553 -0
  966. meta_subject/migrations/0217_alter_historicalnextappointment_appt_datetime_and_more.py +42 -0
  967. meta_subject/migrations/0218_alter_historicalnextappointment_appt_date_and_more.py +53 -0
  968. meta_subject/migrations/0219_remove_historicalnextappointment_allow_create_interim_and_more.py +92 -0
  969. meta_subject/migrations/0220_historicalbloodresultsgludummy_bloodresultsgludummy.py +825 -0
  970. meta_subject/migrations/0221_auto_20250402_1913.py +42 -0
  971. meta_subject/migrations/0222_alter_historicalstudymedication_stock_codes_and_more.py +46 -0
  972. meta_subject/migrations/0223_bloodresultsfbc_errors_bloodresultsgludummy_errors_and_more.py +83 -0
  973. meta_subject/migrations/0224_bloodresultsfbc_abnormal_summary_and_more.py +153 -0
  974. meta_subject/migrations/0225_followupvitals_waist_circumference_and_more.py +46 -0
  975. meta_subject/migrations/0226_followupvitals_waist_circumference_comment_and_more.py +97 -0
  976. meta_subject/migrations/0227_alter_followupvitals_waist_circumference_comment_and_more.py +97 -0
  977. meta_subject/migrations/0228_bloodresultshba1c_hba1c_datetime_and_more.py +2518 -0
  978. meta_subject/migrations/0229_alter_glucosefbg_consent_model_and_more.py +1918 -0
  979. meta_subject/migrations/0230_alter_historicaldelivery_action_identifier_and_more.py +1733 -0
  980. meta_subject/migrations/0231_alter_historicalmedicationadherence_consent_model_and_more.py +2054 -0
  981. meta_subject/migrations/0232_alter_patienthistory_concomitant_conditions_and_more.py +1170 -0
  982. meta_subject/migrations/0233_historicalspfq_spfq.py +1066 -0
  983. meta_subject/migrations/0234_remove_spfq_site_remove_spfq_subject_visit_and_more.py +27 -0
  984. meta_subject/migrations/0235_glucosefbg_endpoint_today_and_more.py +606 -0
  985. meta_subject/migrations/0236_alter_historicalhivexitreview_other_current_arv_regimen_and_more.py +58 -0
  986. meta_subject/migrations/0237_historicalhivexitreview_singleton_field_and_more.py +68 -0
  987. meta_subject/migrations/0238_historicalhivexitreview_available_and_more.py +88 -0
  988. meta_subject/model_mixins/__init__.py +10 -0
  989. meta_subject/model_mixins/arv_history_model_mixin.py +5 -46
  990. meta_subject/model_mixins/arv_review_model_mixin.py +53 -0
  991. meta_subject/model_mixins/search_slug_model_mixin.py +1 -2
  992. meta_subject/model_mixins/vitals_fields_model_mixin.py +33 -1
  993. meta_subject/models/__init__.py +61 -4
  994. meta_subject/models/birth_outcomes.py +17 -8
  995. meta_subject/models/blood_results/__init__.py +12 -2
  996. meta_subject/models/blood_results/blood_results_fbc.py +9 -4
  997. meta_subject/models/blood_results/blood_results_glu.py +9 -4
  998. meta_subject/models/blood_results/blood_results_hba1c.py +8 -2
  999. meta_subject/models/blood_results/blood_results_ins.py +8 -2
  1000. meta_subject/models/blood_results/blood_results_lft.py +8 -2
  1001. meta_subject/models/blood_results/{blood_results_lipid.py → blood_results_lipids.py} +11 -4
  1002. meta_subject/models/blood_results/blood_results_rft.py +7 -1
  1003. meta_subject/models/complications.py +1 -3
  1004. meta_subject/models/complications_glycemia.py +3 -4
  1005. meta_subject/models/concomitant_medication.py +0 -1
  1006. meta_subject/models/delivery.py +4 -6
  1007. meta_subject/models/diabetes/__init__.py +4 -0
  1008. meta_subject/models/diabetes/dm_endpoint.py +61 -0
  1009. meta_subject/models/diabetes/dm_followup.py +215 -0
  1010. meta_subject/models/diet_and_lifestyle.py +5 -5
  1011. meta_subject/models/egfr_drop_notification.py +0 -1
  1012. meta_subject/models/followup_examination.py +28 -32
  1013. meta_subject/models/followup_vitals.py +3 -4
  1014. meta_subject/models/glucose.py +50 -15
  1015. meta_subject/models/glucose_fbg.py +74 -0
  1016. meta_subject/models/glucose_review.py +15 -0
  1017. meta_subject/models/health_economics/__init__.py +5 -0
  1018. meta_subject/models/{health_economics.py → health_economics/health_economics.py} +13 -14
  1019. meta_subject/models/{health_economics_simple.py → health_economics/health_economics_simple.py} +3 -4
  1020. meta_subject/models/health_economics/health_economics_update.py +97 -0
  1021. meta_subject/models/hepatitis_test.py +2 -3
  1022. meta_subject/models/hiv_exit_review.py +44 -0
  1023. meta_subject/models/malaria_test.py +3 -31
  1024. meta_subject/models/next_appointment.py +15 -0
  1025. meta_subject/models/off_study_drug.py +0 -1
  1026. meta_subject/models/other_arv_regimens_detail.py +3 -5
  1027. meta_subject/models/patient_history.py +6 -8
  1028. meta_subject/models/physical_exam.py +6 -6
  1029. meta_subject/models/pregnancy_update.py +1 -2
  1030. meta_subject/models/sf12.py +0 -3
  1031. meta_subject/models/signals.py +32 -11
  1032. meta_subject/models/study_medication.py +0 -1
  1033. meta_subject/models/subject_requisition.py +3 -5
  1034. meta_subject/models/subject_visit.py +5 -8
  1035. meta_subject/models/subject_visit_missed.py +0 -1
  1036. meta_subject/models/todo.txt +1 -1
  1037. meta_subject/models/urine_dipstick_test.py +2 -3
  1038. meta_subject/models/urine_pregnancy.py +1 -2
  1039. meta_subject/static/meta_subject/slider.css +1 -1
  1040. meta_subject/templates/meta_subject/endpoint_review_instructions.html +6 -0
  1041. meta_subject/templates/meta_subject/widgets/slider.html +0 -1
  1042. meta_visit_schedule/constants.py +7 -1
  1043. meta_visit_schedule/visit_schedules/__init__.py +3 -1
  1044. meta_visit_schedule/visit_schedules/phase_three/__init__.py +2 -0
  1045. meta_visit_schedule/visit_schedules/phase_three/crfs.py +212 -95
  1046. meta_visit_schedule/visit_schedules/phase_three/crfs_pregnancy.py +2 -2
  1047. meta_visit_schedule/visit_schedules/phase_three/requisitions.py +30 -51
  1048. meta_visit_schedule/visit_schedules/phase_three/schedule.py +72 -7
  1049. meta_visit_schedule/visit_schedules/phase_three/schedule_dm_referral.py +59 -0
  1050. meta_visit_schedule/visit_schedules/phase_three/schedule_pregnancy.py +7 -5
  1051. meta_visit_schedule/visit_schedules/phase_three/visit_schedule.py +3 -1
  1052. meta_ae/pdf_reports/ae_report.py +0 -8
  1053. meta_ae/pdf_reports/death_report.py +0 -8
  1054. meta_ae/tests/holidays.csv +0 -15
  1055. meta_ae/tests/tests/test_actions.py +0 -127
  1056. meta_ae/tests/urls.py +0 -10
  1057. meta_consent/admin/subject_reconsent_admin.py +0 -77
  1058. meta_consent/tests/holidays.csv +0 -15
  1059. meta_consent/tests/tests/test_form_validators.py +0 -85
  1060. meta_consent/tests/tests/test_subject_consent.py +0 -10
  1061. meta_consent/tests/urls.py +0 -18
  1062. meta_dashboard/model_wrappers/__init__.py +0 -8
  1063. meta_dashboard/model_wrappers/ae_initial_model_wrapper.py +0 -6
  1064. meta_dashboard/model_wrappers/death_report_model_wrapper.py +0 -15
  1065. meta_dashboard/model_wrappers/subject_refusal_model_wrapper.py +0 -16
  1066. meta_dashboard/model_wrappers/subject_screening_model_wrapper.py +0 -85
  1067. meta_dashboard/templates/meta_dashboard/bootstrap3/subject/dashboard.html +0 -11
  1068. meta_dashboard/tests/admin.py +0 -22
  1069. meta_dashboard/tests/holidays.csv +0 -15
  1070. meta_dashboard/tests/tests/test_model_wrappers.py +0 -71
  1071. meta_dashboard/tests/urls.py +0 -59
  1072. meta_edc/tests/etc/randomization_list_phase_three.csv +0 -241
  1073. meta_edc/tests/etc/user-aes-local.key +0 -1
  1074. meta_edc/tests/etc/user-aes-restricted.key +0 -0
  1075. meta_edc/tests/etc/user-rsa-local-private.pem +0 -27
  1076. meta_edc/tests/etc/user-rsa-local-public.pem +0 -9
  1077. meta_edc/tests/etc/user-rsa-restricted-private.pem +0 -27
  1078. meta_edc/tests/etc/user-rsa-restricted-public.pem +0 -9
  1079. meta_edc/tests/etc/user-salt-local.key +0 -0
  1080. meta_edc/tests/etc/user-salt-restricted.key +0 -0
  1081. meta_edc/tests/tests/test_endpoints.py +0 -525
  1082. meta_edc-0.2.24.dist-info/METADATA +0 -180
  1083. meta_edc-0.2.24.dist-info/RECORD +0 -849
  1084. meta_edc-0.2.24.dist-info/WHEEL +0 -5
  1085. meta_edc-0.2.24.dist-info/top_level.txt +0 -19
  1086. meta_labs/tests/test_labs.py +0 -27
  1087. meta_labs/tests/test_reportables.py +0 -16
  1088. meta_labs/tests/urls.py +0 -4
  1089. meta_lists/tests/test_lists.py +0 -8
  1090. meta_pharmacy/models.py +0 -0
  1091. meta_prn/tests/__init__.py +0 -0
  1092. meta_prn/tests/tests/__init__.py +0 -0
  1093. meta_prn/tests/tests/test_actions.py +0 -97
  1094. meta_prn/tests/tests/test_manager_order.py +0 -15
  1095. meta_prn/tests/tests/test_pregnancy_notification.py +0 -94
  1096. meta_prn/tests/urls.py +0 -10
  1097. meta_rando/tests/__init__.py +0 -0
  1098. meta_rando/tests/tests/__init__.py +0 -0
  1099. meta_rando/tests/tests/test_randomizers.py +0 -58
  1100. meta_reference/__init__.py +0 -0
  1101. meta_reference/apps.py +0 -6
  1102. meta_reference/migrations/__init__.py +0 -0
  1103. meta_reference/reference_model_configs.py +0 -5
  1104. meta_reports/models.py +0 -0
  1105. meta_reports/tests/__init__.py +0 -0
  1106. meta_reports/tests/holidays.csv +0 -15
  1107. meta_reports/tests/test_reports.py +0 -36
  1108. meta_reports/tests/urls.py +0 -4
  1109. meta_screening/offline_models.py +0 -3
  1110. meta_screening/tests/__init__.py +0 -0
  1111. meta_screening/tests/holidays.csv +0 -15
  1112. meta_screening/tests/meta_test_case_mixin.py +0 -214
  1113. meta_screening/tests/options.py +0 -124
  1114. meta_screening/tests/tests/__init__.py +0 -0
  1115. meta_screening/tests/tests/test_forms.py +0 -397
  1116. meta_screening/tests/tests/test_screening_part_one.py +0 -108
  1117. meta_screening/tests/tests/test_screening_part_three.py +0 -437
  1118. meta_screening/tests/tests/test_screening_part_two.py +0 -86
  1119. meta_sites/tests/__init__.py +0 -0
  1120. meta_sites/tests/test_sites.py +0 -16
  1121. meta_sites/tests/urls.py +0 -4
  1122. meta_subject/admin/blood_results/blood_results_glu_admin.py +0 -30
  1123. meta_subject/admin/blood_results/blood_results_lipid_admin.py +0 -21
  1124. meta_subject/forms/blood_results/blood_results_glu_form.py +0 -26
  1125. meta_subject/forms/health_economics_simple_form.py +0 -19
  1126. meta_subject/tests/__init__.py +0 -0
  1127. meta_subject/tests/holidays.csv +0 -15
  1128. meta_subject/tests/tests/__init__.py +0 -0
  1129. meta_subject/tests/tests/test_egfr.py +0 -222
  1130. meta_subject/tests/tests/test_followup.py +0 -50
  1131. meta_subject/tests/tests/test_manager_order.py +0 -31
  1132. meta_subject/tests/tests/test_medication_adherence.py +0 -72
  1133. meta_subject/tests/tests/test_metadata_rules.py +0 -105
  1134. meta_subject/tests/tests/test_mnsi.py +0 -246
  1135. meta_subject/tests/tests/test_patient_history_form.py +0 -71
  1136. meta_subject/tests/tests/test_physical_exam.py +0 -81
  1137. meta_subject/tests/tests/test_sf12.py +0 -164
  1138. meta_subject/tests/tests/test_study_medication.py +0 -230
  1139. meta_subject/tests/urls.py +0 -25
  1140. meta_visit_schedule/tests/__init__.py +0 -0
  1141. meta_visit_schedule/tests/tests/__init__.py +0 -0
  1142. meta_visit_schedule/tests/tests/test_schedule.py +0 -177
  1143. meta_visit_schedule/tests/urls.py +0 -4
  1144. tests/__init__.py +0 -0
  1145. tests/etc/randomization_list.csv +0 -241
  1146. tests/etc/user-aes-local.key +0 -0
  1147. tests/etc/user-aes-restricted.key +0 -1
  1148. tests/etc/user-rsa-local-private.pem +0 -27
  1149. tests/etc/user-rsa-local-public.pem +0 -9
  1150. tests/etc/user-rsa-restricted-private.pem +0 -27
  1151. tests/etc/user-rsa-restricted-public.pem +0 -9
  1152. tests/etc/user-salt-local.key +0 -0
  1153. tests/etc/user-salt-restricted.key +0 -0
  1154. tests/holidays.csv +0 -15
  1155. /meta_ae/templates/meta_ae/{bootstrap3/ae_initial_description.html → aeinitial_description.html} +0 -0
  1156. {meta_ae/tests → meta_analytics}/__init__.py +0 -0
  1157. /meta_ae/tests/tests/__init__.py → /meta_analytics/constants.py +0 -0
  1158. {meta_consent/tests → meta_analytics/tables/enrolled}/__init__.py +0 -0
  1159. /meta_dashboard/templates/meta_dashboard/{bootstrap3/buttons → buttons}/add_consent_button.html +0 -0
  1160. /meta_dashboard/templates/meta_dashboard/{bootstrap3/buttons → buttons}/refusal_button.html +0 -0
  1161. {meta_consent/tests/tests → meta_edc/migrations}/__init__.py +0 -0
  1162. {meta_edc-0.2.24.dist-info → meta_edc-1.4.0.dist-info/licenses}/LICENSE +0 -0
  1163. {meta_dashboard/tests → meta_pharmacy/management}/__init__.py +0 -0
  1164. {meta_dashboard/tests/tests → meta_pharmacy/management/commands}/__init__.py +0 -0
  1165. {meta_edc/tests → meta_reports/management}/__init__.py +0 -0
  1166. {meta_edc/tests/tests → meta_reports/management/commands}/__init__.py +0 -0
  1167. /meta_edc-0.2.24.dist-info/AUTHORS → /meta_reports/utils.py +0 -0
  1168. /meta_labs/tests/__init__.py → /meta_subject/management/__init__py.py +0 -0
  1169. /meta_lists/tests/__init__.py → /meta_subject/management/commands/__init__py.py +0 -0
meta_edc-0.2.24.dist-info/RECORD DELETED
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