endoreg-db 0.5.2__py3-none-any.whl → 0.6.0__py3-none-any.whl
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- endoreg_db/admin.py +90 -1
- endoreg_db/urls.py +173 -0
- endoreg_db/views.py +0 -3
- endoreg_db-0.6.0.dist-info/METADATA +151 -0
- endoreg_db-0.6.0.dist-info/RECORD +11 -0
- {endoreg_db-0.5.2.dist-info → endoreg_db-0.6.0.dist-info}/WHEEL +2 -1
- endoreg_db-0.6.0.dist-info/top_level.txt +1 -0
- endoreg_db/data/__init__.py +0 -72
- endoreg_db/data/active_model/data.yaml +0 -3
- endoreg_db/data/agl_service/data.yaml +0 -19
- endoreg_db/data/case_template/rule/00_patient_lab_sample_add_default_value.yaml +0 -167
- endoreg_db/data/case_template/rule/01_patient-set-age.yaml +0 -8
- endoreg_db/data/case_template/rule/01_patient-set-gender.yaml +0 -9
- endoreg_db/data/case_template/rule/11_create_patient_lab_sample.yaml +0 -23
- endoreg_db/data/case_template/rule/12_create-patient_medication-anticoagulation.yaml +0 -19
- endoreg_db/data/case_template/rule/13_create-patient_medication_schedule-anticoagulation.yaml +0 -19
- endoreg_db/data/case_template/rule/19_create_patient.yaml +0 -17
- endoreg_db/data/case_template/rule_type/base_types.yaml +0 -35
- endoreg_db/data/case_template/rule_value/.init +0 -0
- endoreg_db/data/case_template/rule_value_type/base_types.yaml +0 -59
- endoreg_db/data/case_template/template/base.yaml +0 -8
- endoreg_db/data/case_template/template_type/pre_endoscopy.yaml +0 -3
- endoreg_db/data/case_template/tmp/_rule_value +0 -13
- endoreg_db/data/case_template/tmp/rule/01_atrial_fibrillation.yaml +0 -21
- endoreg_db/data/case_template/tmp/rule/02_create_object.yaml +0 -10
- endoreg_db/data/case_template/tmp/template/atrial_fibrillation_low_risk.yaml +0 -7
- endoreg_db/data/center/data.yaml +0 -60
- endoreg_db/data/center_resource/green_endoscopy_dashboard_CenterResource.yaml +0 -144
- endoreg_db/data/center_waste/green_endoscopy_dashboard_CenterWaste.yaml +0 -48
- endoreg_db/data/disease/cardiovascular.yaml +0 -37
- endoreg_db/data/disease/hepatology.yaml +0 -5
- endoreg_db/data/disease/misc.yaml +0 -6
- endoreg_db/data/disease/renal.yaml +0 -5
- endoreg_db/data/disease_classification/chronic_kidney_disease.yaml +0 -6
- endoreg_db/data/disease_classification/coronary_vessel_disease.yaml +0 -6
- endoreg_db/data/disease_classification_choice/chronic_kidney_disease.yaml +0 -41
- endoreg_db/data/disease_classification_choice/coronary_vessel_disease.yaml +0 -20
- endoreg_db/data/distribution/date/patient.yaml +0 -7
- endoreg_db/data/distribution/multiple_categorical/.init +0 -0
- endoreg_db/data/distribution/numeric/.init +0 -0
- endoreg_db/data/distribution/single_categorical/patient.yaml +0 -7
- endoreg_db/data/emission_factor/green_endoscopy_dashboard_EmissionFactor.yaml +0 -132
- endoreg_db/data/endoscope_type/data.yaml +0 -11
- endoreg_db/data/endoscopy_processor/data.yaml +0 -47
- endoreg_db/data/event/cardiology.yaml +0 -28
- endoreg_db/data/event/neurology.yaml +0 -14
- endoreg_db/data/event/surgery.yaml +0 -13
- endoreg_db/data/event/thrombembolism.yaml +0 -20
- endoreg_db/data/examination/examinations/data.yaml +0 -66
- endoreg_db/data/examination/time/data.yaml +0 -48
- endoreg_db/data/examination/time-type/data.yaml +0 -8
- endoreg_db/data/examination/type/data.yaml +0 -5
- endoreg_db/data/gender/data.yaml +0 -18
- endoreg_db/data/information_source/data.yaml +0 -30
- endoreg_db/data/information_source/medication.yaml +0 -6
- endoreg_db/data/lab_value/cardiac_enzymes.yaml +0 -31
- endoreg_db/data/lab_value/coagulation.yaml +0 -49
- endoreg_db/data/lab_value/electrolytes.yaml +0 -190
- endoreg_db/data/lab_value/gastrointestinal_function.yaml +0 -121
- endoreg_db/data/lab_value/hematology.yaml +0 -169
- endoreg_db/data/lab_value/hormones.yaml +0 -53
- endoreg_db/data/lab_value/lipids.yaml +0 -44
- endoreg_db/data/lab_value/misc.yaml +0 -30
- endoreg_db/data/lab_value/renal_function.yaml +0 -11
- endoreg_db/data/label/label/data.yaml +0 -62
- endoreg_db/data/label/label-set/data.yaml +0 -18
- endoreg_db/data/label/label-type/data.yaml +0 -7
- endoreg_db/data/log_type/data.yaml +0 -57
- endoreg_db/data/material/material.yaml +0 -91
- endoreg_db/data/medication/anticoagulation.yaml +0 -65
- endoreg_db/data/medication/tah.yaml +0 -70
- endoreg_db/data/medication_indication/anticoagulation.yaml +0 -120
- endoreg_db/data/medication_indication_type/data.yaml +0 -11
- endoreg_db/data/medication_indication_type/thrombembolism.yaml +0 -41
- endoreg_db/data/medication_intake_time/base.yaml +0 -31
- endoreg_db/data/medication_schedule/apixaban.yaml +0 -95
- endoreg_db/data/medication_schedule/ass.yaml +0 -12
- endoreg_db/data/medication_schedule/enoxaparin.yaml +0 -26
- endoreg_db/data/model_type/data.yaml +0 -7
- endoreg_db/data/network_device/data.yaml +0 -29
- endoreg_db/data/network_device_type/data.yaml +0 -12
- endoreg_db/data/patient_lab_sample_type/generic.yaml +0 -6
- endoreg_db/data/pdf_type/data.yaml +0 -28
- endoreg_db/data/product/green_endoscopy_dashboard_Product.yaml +0 -66
- endoreg_db/data/product_group/green_endoscopy_dashboard_ProductGroup.yaml +0 -33
- endoreg_db/data/product_material/green_endoscopy_dashboard_ProductMaterial.yaml +0 -308
- endoreg_db/data/product_weight/green_endoscopy_dashboard_ProductWeight.yaml +0 -88
- endoreg_db/data/profession/data.yaml +0 -70
- endoreg_db/data/reference_product/green_endoscopy_dashboard_ReferenceProduct.yaml +0 -55
- endoreg_db/data/report_reader_flag/ukw-examination-generic.yaml +0 -26
- endoreg_db/data/report_reader_flag/ukw-histology-generic.yaml +0 -19
- endoreg_db/data/resource/green_endoscopy_dashboard_Resource.yaml +0 -15
- endoreg_db/data/tmp/chronic_kidney_disease.yaml +0 -0
- endoreg_db/data/tmp/congestive_heart_failure.yaml +0 -0
- endoreg_db/data/transport_route/green_endoscopy_dashboard_TransportRoute.yaml +0 -12
- endoreg_db/data/unit/concentration.yaml +0 -92
- endoreg_db/data/unit/data.yaml +0 -17
- endoreg_db/data/unit/length.yaml +0 -31
- endoreg_db/data/unit/misc.yaml +0 -20
- endoreg_db/data/unit/rate.yaml +0 -6
- endoreg_db/data/unit/time.yaml +0 -13
- endoreg_db/data/unit/volume.yaml +0 -35
- endoreg_db/data/unit/weight.yaml +0 -38
- endoreg_db/data/waste/data.yaml +0 -12
- endoreg_db/forms/__init__.py +0 -3
- endoreg_db/forms/questionnaires/__init__.py +0 -1
- endoreg_db/forms/questionnaires/tto_questionnaire.py +0 -23
- endoreg_db/forms/settings/__init__.py +0 -8
- endoreg_db/forms/unit.py +0 -6
- endoreg_db/management/commands/_load_model_template.py +0 -41
- endoreg_db/management/commands/delete_all.py +0 -18
- endoreg_db/management/commands/delete_legacy_images.py +0 -19
- endoreg_db/management/commands/delete_legacy_videos.py +0 -17
- endoreg_db/management/commands/extract_legacy_video_frames.py +0 -18
- endoreg_db/management/commands/fetch_legacy_image_dataset.py +0 -32
- endoreg_db/management/commands/fix_auth_permission.py +0 -20
- endoreg_db/management/commands/import_legacy_images.py +0 -94
- endoreg_db/management/commands/import_legacy_videos.py +0 -76
- endoreg_db/management/commands/load_active_model_data.py +0 -45
- endoreg_db/management/commands/load_ai_model_data.py +0 -45
- endoreg_db/management/commands/load_base_db_data.py +0 -136
- endoreg_db/management/commands/load_center_data.py +0 -43
- endoreg_db/management/commands/load_disease_classification_choices_data.py +0 -41
- endoreg_db/management/commands/load_disease_classification_data.py +0 -41
- endoreg_db/management/commands/load_disease_data.py +0 -40
- endoreg_db/management/commands/load_distribution_data.py +0 -66
- endoreg_db/management/commands/load_endoscope_type_data.py +0 -45
- endoreg_db/management/commands/load_endoscopy_processor_data.py +0 -45
- endoreg_db/management/commands/load_event_data.py +0 -41
- endoreg_db/management/commands/load_examination_data.py +0 -75
- endoreg_db/management/commands/load_g_play_data.py +0 -113
- endoreg_db/management/commands/load_gender_data.py +0 -44
- endoreg_db/management/commands/load_green_endoscopy_wuerzburg_data.py +0 -133
- endoreg_db/management/commands/load_information_source.py +0 -45
- endoreg_db/management/commands/load_lab_value_data.py +0 -50
- endoreg_db/management/commands/load_label_data.py +0 -67
- endoreg_db/management/commands/load_logging_data.py +0 -39
- endoreg_db/management/commands/load_medication_data.py +0 -41
- endoreg_db/management/commands/load_medication_indication_data.py +0 -63
- endoreg_db/management/commands/load_medication_indication_type_data.py +0 -41
- endoreg_db/management/commands/load_medication_intake_time_data.py +0 -41
- endoreg_db/management/commands/load_medication_schedule_data.py +0 -55
- endoreg_db/management/commands/load_network_data.py +0 -57
- endoreg_db/management/commands/load_pdf_type_data.py +0 -61
- endoreg_db/management/commands/load_profession_data.py +0 -44
- endoreg_db/management/commands/load_report_reader_flag.py +0 -46
- endoreg_db/management/commands/load_unit_data.py +0 -46
- endoreg_db/management/commands/load_user_groups.py +0 -28
- endoreg_db/management/commands/register_ai_model.py +0 -64
- endoreg_db/management/commands/reset_celery_schedule.py +0 -9
- endoreg_db/migrations/0001_initial.py +0 -1567
- endoreg_db/migrations/0002_anonymizedimagelabel_anonymousimageannotation_and_more.py +0 -55
- endoreg_db/migrations/0003_anonymousimageannotation_original_image_url_and_more.py +0 -39
- endoreg_db/migrations/0004_alter_rawpdffile_file.py +0 -20
- endoreg_db/migrations/0005_uploadedfile_alter_rawpdffile_file_anonymizedfile.py +0 -40
- endoreg_db/migrations/0006_alter_rawpdffile_file.py +0 -20
- endoreg_db/migrations/0007_networkdevicelogentry_datetime_and_more.py +0 -43
- endoreg_db/migrations/0008_networkdevicelogentry_aglnet_ip_and_more.py +0 -28
- endoreg_db/migrations/0009_alter_networkdevicelogentry_vpn_service_status.py +0 -18
- endoreg_db/migrations/0010_remove_networkdevicelogentry_hostname.py +0 -17
- endoreg_db/migrations/__init__.py +0 -0
- endoreg_db/models/__init__.py +0 -73
- endoreg_db/models/ai_model/__init__.py +0 -3
- endoreg_db/models/ai_model/active_model.py +0 -9
- endoreg_db/models/ai_model/model_meta.py +0 -24
- endoreg_db/models/ai_model/model_type.py +0 -26
- endoreg_db/models/ai_model/utils.py +0 -8
- endoreg_db/models/annotation/__init__.py +0 -3
- endoreg_db/models/annotation/anonymized_image_annotation.py +0 -60
- endoreg_db/models/annotation/binary_classification_annotation_task.py +0 -80
- endoreg_db/models/annotation/image_classification.py +0 -27
- endoreg_db/models/case_template/__init__.py +0 -6
- endoreg_db/models/case_template/case_template.py +0 -81
- endoreg_db/models/case_template/case_template_rule.py +0 -276
- endoreg_db/models/case_template/case_template_rule_value.py +0 -73
- endoreg_db/models/case_template/case_template_type.py +0 -28
- endoreg_db/models/center/__init__.py +0 -4
- endoreg_db/models/center/center.py +0 -25
- endoreg_db/models/center/center_product.py +0 -34
- endoreg_db/models/center/center_resource.py +0 -19
- endoreg_db/models/center/center_waste.py +0 -11
- endoreg_db/models/data_file/__init__.py +0 -6
- endoreg_db/models/data_file/base_classes/__init__.py +0 -2
- endoreg_db/models/data_file/base_classes/abstract_frame.py +0 -51
- endoreg_db/models/data_file/base_classes/abstract_video.py +0 -201
- endoreg_db/models/data_file/frame.py +0 -45
- endoreg_db/models/data_file/import_classes/__init__.py +0 -32
- endoreg_db/models/data_file/import_classes/processing_functions/__init__.py +0 -35
- endoreg_db/models/data_file/import_classes/processing_functions/pdf.py +0 -28
- endoreg_db/models/data_file/import_classes/processing_functions/video.py +0 -260
- endoreg_db/models/data_file/import_classes/raw_pdf.py +0 -188
- endoreg_db/models/data_file/import_classes/raw_video.py +0 -343
- endoreg_db/models/data_file/metadata/__init__.py +0 -3
- endoreg_db/models/data_file/metadata/pdf_meta.py +0 -70
- endoreg_db/models/data_file/metadata/sensitive_meta.py +0 -31
- endoreg_db/models/data_file/metadata/video_meta.py +0 -133
- endoreg_db/models/data_file/report_file.py +0 -89
- endoreg_db/models/data_file/video/__init__.py +0 -7
- endoreg_db/models/data_file/video/import_meta.py +0 -25
- endoreg_db/models/data_file/video/video.py +0 -25
- endoreg_db/models/data_file/video_segment.py +0 -107
- endoreg_db/models/disease.py +0 -56
- endoreg_db/models/emission/__init__.py +0 -1
- endoreg_db/models/emission/emission_factor.py +0 -20
- endoreg_db/models/event.py +0 -22
- endoreg_db/models/examination/__init__.py +0 -4
- endoreg_db/models/examination/examination.py +0 -26
- endoreg_db/models/examination/examination_time.py +0 -27
- endoreg_db/models/examination/examination_time_type.py +0 -24
- endoreg_db/models/examination/examination_type.py +0 -18
- endoreg_db/models/hardware/__init__.py +0 -2
- endoreg_db/models/hardware/endoscope.py +0 -44
- endoreg_db/models/hardware/endoscopy_processor.py +0 -143
- endoreg_db/models/information_source.py +0 -29
- endoreg_db/models/label/__init__.py +0 -1
- endoreg_db/models/label/label.py +0 -84
- endoreg_db/models/laboratory/__init__.py +0 -1
- endoreg_db/models/laboratory/lab_value.py +0 -102
- endoreg_db/models/legacy_data/__init__.py +0 -3
- endoreg_db/models/legacy_data/image.py +0 -34
- endoreg_db/models/logging/__init__.py +0 -4
- endoreg_db/models/logging/agl_service.py +0 -19
- endoreg_db/models/logging/base.py +0 -22
- endoreg_db/models/logging/log_type.py +0 -23
- endoreg_db/models/logging/network_device.py +0 -27
- endoreg_db/models/medication/__init__.py +0 -1
- endoreg_db/models/medication/medication.py +0 -148
- endoreg_db/models/network/__init__.py +0 -3
- endoreg_db/models/network/agl_service.py +0 -38
- endoreg_db/models/network/network_device.py +0 -53
- endoreg_db/models/network/network_device_type.py +0 -23
- endoreg_db/models/other/__init__.py +0 -5
- endoreg_db/models/other/distribution.py +0 -215
- endoreg_db/models/other/material.py +0 -16
- endoreg_db/models/other/resource.py +0 -18
- endoreg_db/models/other/transport_route.py +0 -21
- endoreg_db/models/other/waste.py +0 -20
- endoreg_db/models/patient_examination/__init__.py +0 -35
- endoreg_db/models/permissions/__init__.py +0 -44
- endoreg_db/models/persons/__init__.py +0 -7
- endoreg_db/models/persons/examiner/__init__.py +0 -2
- endoreg_db/models/persons/examiner/examiner.py +0 -16
- endoreg_db/models/persons/examiner/examiner_type.py +0 -2
- endoreg_db/models/persons/first_name.py +0 -18
- endoreg_db/models/persons/gender.py +0 -22
- endoreg_db/models/persons/last_name.py +0 -20
- endoreg_db/models/persons/patient/__init__.py +0 -8
- endoreg_db/models/persons/patient/case/__init__.py +0 -0
- endoreg_db/models/persons/patient/case/case.py +0 -30
- endoreg_db/models/persons/patient/patient.py +0 -216
- endoreg_db/models/persons/patient/patient_disease.py +0 -16
- endoreg_db/models/persons/patient/patient_event.py +0 -22
- endoreg_db/models/persons/patient/patient_lab_sample.py +0 -106
- endoreg_db/models/persons/patient/patient_lab_value.py +0 -176
- endoreg_db/models/persons/patient/patient_medication.py +0 -44
- endoreg_db/models/persons/patient/patient_medication_schedule.py +0 -28
- endoreg_db/models/persons/person.py +0 -31
- endoreg_db/models/persons/portal_user_information.py +0 -27
- endoreg_db/models/prediction/__init__.py +0 -2
- endoreg_db/models/prediction/image_classification.py +0 -37
- endoreg_db/models/prediction/video_prediction_meta.py +0 -244
- endoreg_db/models/product/__init__.py +0 -5
- endoreg_db/models/product/product.py +0 -97
- endoreg_db/models/product/product_group.py +0 -19
- endoreg_db/models/product/product_material.py +0 -24
- endoreg_db/models/product/product_weight.py +0 -26
- endoreg_db/models/product/reference_product.py +0 -99
- endoreg_db/models/questionnaires/__init__.py +0 -114
- endoreg_db/models/quiz/__init__.py +0 -2
- endoreg_db/models/quiz/quiz_answer.py +0 -41
- endoreg_db/models/quiz/quiz_question.py +0 -54
- endoreg_db/models/report_reader/__init__.py +0 -2
- endoreg_db/models/report_reader/report_reader_config.py +0 -53
- endoreg_db/models/report_reader/report_reader_flag.py +0 -20
- endoreg_db/models/rules/__init__.py +0 -5
- endoreg_db/models/rules/rule.py +0 -24
- endoreg_db/models/rules/rule_applicator.py +0 -224
- endoreg_db/models/rules/rule_attribute_dtype.py +0 -19
- endoreg_db/models/rules/rule_type.py +0 -22
- endoreg_db/models/rules/ruleset.py +0 -19
- endoreg_db/models/unit.py +0 -22
- endoreg_db/queries/__init__.py +0 -5
- endoreg_db/queries/annotations/__init__.py +0 -3
- endoreg_db/queries/annotations/legacy.py +0 -158
- endoreg_db/queries/get/__init__.py +0 -6
- endoreg_db/queries/get/annotation.py +0 -0
- endoreg_db/queries/get/center.py +0 -42
- endoreg_db/queries/get/model.py +0 -13
- endoreg_db/queries/get/patient.py +0 -14
- endoreg_db/queries/get/patient_examination.py +0 -20
- endoreg_db/queries/get/prediction.py +0 -0
- endoreg_db/queries/get/report_file.py +0 -33
- endoreg_db/queries/get/video.py +0 -31
- endoreg_db/queries/get/video_import_meta.py +0 -0
- endoreg_db/queries/get/video_prediction_meta.py +0 -0
- endoreg_db/queries/sanity/__init_.py +0 -0
- endoreg_db/serializers/__init__.py +0 -10
- endoreg_db/serializers/ai_model.py +0 -19
- endoreg_db/serializers/annotation.py +0 -17
- endoreg_db/serializers/center.py +0 -11
- endoreg_db/serializers/examination.py +0 -33
- endoreg_db/serializers/frame.py +0 -13
- endoreg_db/serializers/hardware.py +0 -21
- endoreg_db/serializers/label.py +0 -22
- endoreg_db/serializers/patient.py +0 -10
- endoreg_db/serializers/prediction.py +0 -15
- endoreg_db/serializers/report_file.py +0 -7
- endoreg_db/serializers/video.py +0 -27
- endoreg_db/utils/__init__.py +0 -1
- endoreg_db/utils/cropping.py +0 -29
- endoreg_db/utils/dataloader.py +0 -92
- endoreg_db/utils/file_operations.py +0 -30
- endoreg_db/utils/hashs.py +0 -34
- endoreg_db/utils/legacy_ocr.py +0 -201
- endoreg_db/utils/ocr.py +0 -190
- endoreg_db/utils/uuid.py +0 -4
- endoreg_db/utils/video_metadata.py +0 -87
- endoreg_db-0.5.2.dist-info/METADATA +0 -27
- endoreg_db-0.5.2.dist-info/RECORD +0 -319
- {endoreg_db-0.5.2.dist-info/licenses → endoreg_db-0.6.0.dist-info}/LICENSE +0 -0
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"""
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label = models.ForeignKey("Label", on_delete=models.CASCADE, related_name="image_classification_predictions")
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frame = models.ForeignKey("Frame", on_delete=models.CASCADE, blank=True, null=True, related_name="image_classification_predictions")
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legacy_frame = models.ForeignKey("LegacyFrame", on_delete=models.CASCADE, blank=True, null=True, related_name="image_classification_predictions")
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legacy_image = models.ForeignKey("LegacyImage", on_delete=models.CASCADE, blank=True, null=True, related_name="image_classification_predictions")
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value = models.BooleanField()
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confidence = models.FloatField()
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model_meta = models.ForeignKey("ModelMeta", on_delete=models.CASCADE, related_name="image_classification_predictions")
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date_created = models.DateTimeField(auto_now_add=True)
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class Meta:
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unique_together = ('label', 'frame', 'model_meta')
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def get_image_object(self):
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Get the image of the prediction.
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"""
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elif self.legacy_frame:
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elif self.legacy_image:
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@@ -1,244 +0,0 @@
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from django.db import models
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from endoreg_db.models.label.label import LabelSet
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from ..data_file.video import LegacyVideo, Video
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from ..data_file.frame import LegacyFrame, Frame
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from .image_classification import ImageClassificationPrediction
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from ..data_file.video_segment import LegacyLabelVideoSegment, LabelVideoSegment, find_segments_in_prediction_array
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from ..information_source import get_prediction_information_source
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import numpy as np
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import pickle
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DEFAULT_WINDOW_SIZE_IN_SECONDS_FOR_RUNNING_MEAN = 1.5
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DEFAULT_VIDEO_SEGMENT_LENGTH_THRESHOLD_IN_S = 1.0
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class AbstractVideoPredictionMeta(models.Model):
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model_meta = models.ForeignKey("ModelMeta", on_delete=models.CASCADE)
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date_created = models.DateTimeField(auto_now_add=True)
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date_modified = models.DateTimeField(auto_now=True)
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video = None # Placeholder for the video field, to be defined in derived classes
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prediction_array = models.BinaryField(blank=True, null=True)
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class Meta:
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abstract = True
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unique_together = ('model_meta', 'video')
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def __str__(self):
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return f"Video {self.video.id} - {self.model_meta.name}"
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def get_labelset(self):
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"""
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Get the labelset of the predictions.
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"""
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|
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return self.model_meta.labelset
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def get_video_model(self):
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assert 1 == 2, "This method should be overridden in derived classes"
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38
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def get_frame_model(self):
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assert 1 == 2, "This method should be overridden in derived classes"
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|
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41
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def get_label_list(self):
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"""
|
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43
|
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Get the label list of the predictions.
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44
|
-
"""
|
|
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|
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labelset:LabelSet = self.get_labelset()
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|
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|
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label_list = labelset.get_labels_in_order()
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|
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return label_list
|
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|
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|
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49
|
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def get_video_segment_model(self):
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|
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assert 1 == 2, "This method should be overridden in derived classes"
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|
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def save_prediction_array(self, prediction_array:np.array):
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"""
|
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|
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Save the prediction array to the database.
|
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|
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"""
|
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|
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self.prediction_array = pickle.dumps(prediction_array)
|
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|
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self.save()
|
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|
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|
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59
|
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def get_prediction_array(self):
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"""
|
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61
|
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Get the prediction array from the database.
|
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62
|
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"""
|
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63
|
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if self.prediction_array is None:
|
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|
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return None
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|
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else:
|
|
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|
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return pickle.loads(self.prediction_array)
|
|
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|
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|
|
68
|
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def calculate_prediction_array(self):
|
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69
|
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assert 1 == 2, "This method should be overridden in derived classes"
|
|
70
|
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|
|
71
|
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def apply_running_mean(self, confidence_array, window_size_in_seconds: int = None):
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|
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"""
|
|
73
|
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Apply a running mean filter to the confidence array for smoothing, assuming a padding
|
|
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|
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of 0.5 for the edges.
|
|
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|
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|
|
76
|
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Args:
|
|
77
|
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self: Object that has video and fps attributes, and to which this function belongs.
|
|
78
|
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confidence_array: A 2D numpy array with dimensions (num_frames),
|
|
79
|
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containing confidence scores for each label at each frame.
|
|
80
|
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window_size_in_seconds: The window size for the running mean in seconds.
|
|
81
|
-
|
|
82
|
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Returns:
|
|
83
|
-
running_mean_array: A 2D numpy array with the same dimensions as confidence_array,
|
|
84
|
-
containing the smoothed confidence scores.
|
|
85
|
-
"""
|
|
86
|
-
video = self.video
|
|
87
|
-
fps = video.fps
|
|
88
|
-
|
|
89
|
-
if not window_size_in_seconds:
|
|
90
|
-
window_size_in_seconds = DEFAULT_WINDOW_SIZE_IN_SECONDS_FOR_RUNNING_MEAN
|
|
91
|
-
|
|
92
|
-
# Calculate window size in frames, ensuring at least one frame
|
|
93
|
-
window_size_in_frames = int(window_size_in_seconds * fps)
|
|
94
|
-
window_size_in_frames = max(window_size_in_frames, 1)
|
|
95
|
-
|
|
96
|
-
# Define the window for the running mean
|
|
97
|
-
window = np.ones(window_size_in_frames) / window_size_in_frames
|
|
98
|
-
|
|
99
|
-
# Create running mean array with the same shape as the confidence array
|
|
100
|
-
running_mean_array = np.zeros(confidence_array.shape)
|
|
101
|
-
|
|
102
|
-
# Calculate the padding size
|
|
103
|
-
pad_size = window_size_in_frames // 2
|
|
104
|
-
|
|
105
|
-
# Pad the array with 0.5 on both sides
|
|
106
|
-
padded_confidences = np.pad(confidence_array, (pad_size, pad_size), 'constant', constant_values=(0.5, 0.5))
|
|
107
|
-
|
|
108
|
-
# Apply the running mean filter on the padded array
|
|
109
|
-
running_mean = np.convolve(padded_confidences, window, mode='same')
|
|
110
|
-
|
|
111
|
-
# Remove the padding from the result to match the original shape
|
|
112
|
-
running_mean = running_mean[pad_size:-pad_size]
|
|
113
|
-
|
|
114
|
-
return running_mean
|
|
115
|
-
|
|
116
|
-
|
|
117
|
-
def create_video_segments_for_label(self, segments, label):
|
|
118
|
-
"""
|
|
119
|
-
Creates video segments for the given label and segments.
|
|
120
|
-
Segments is a list of tuples (start_frame_number, end_frame_number).
|
|
121
|
-
Labels is a Label object.
|
|
122
|
-
"""
|
|
123
|
-
video = self.video
|
|
124
|
-
video_segment_model = self.get_video_segment_model()
|
|
125
|
-
information_source = get_prediction_information_source()
|
|
126
|
-
|
|
127
|
-
for segment in segments:
|
|
128
|
-
start_frame_number, end_frame_number = segment
|
|
129
|
-
|
|
130
|
-
video_segment = video_segment_model(
|
|
131
|
-
video=video,
|
|
132
|
-
prediction_meta=self,
|
|
133
|
-
start_frame_number=start_frame_number,
|
|
134
|
-
end_frame_number=end_frame_number,
|
|
135
|
-
source=information_source,
|
|
136
|
-
label=label,
|
|
137
|
-
)
|
|
138
|
-
video_segment.save()
|
|
139
|
-
|
|
140
|
-
def create_video_segments(self, segment_length_threshold_in_s:float=None):
|
|
141
|
-
if not segment_length_threshold_in_s:
|
|
142
|
-
segment_length_threshold_in_s = DEFAULT_VIDEO_SEGMENT_LENGTH_THRESHOLD_IN_S
|
|
143
|
-
|
|
144
|
-
video = self.video
|
|
145
|
-
fps = video.fps
|
|
146
|
-
min_frame_length = int(segment_length_threshold_in_s * fps)
|
|
147
|
-
|
|
148
|
-
label_list = self.get_label_list()
|
|
149
|
-
|
|
150
|
-
# if prediction array doesnt exist, create it
|
|
151
|
-
if self.prediction_array is None:
|
|
152
|
-
self.calculate_prediction_array()
|
|
153
|
-
|
|
154
|
-
prediction_array = self.get_prediction_array()
|
|
155
|
-
|
|
156
|
-
for i, label in enumerate(label_list):
|
|
157
|
-
# get predictions for this label
|
|
158
|
-
predictions = prediction_array[:, i]
|
|
159
|
-
# find segments of predictions that are longer than the threshold
|
|
160
|
-
# segments is a list of tuples (start_frame_number, end_frame_number)
|
|
161
|
-
segments = find_segments_in_prediction_array(predictions, min_frame_length)
|
|
162
|
-
|
|
163
|
-
# create video segments
|
|
164
|
-
self.create_video_segments_for_label(segments, label)
|
|
165
|
-
|
|
166
|
-
import numpy as np
|
|
167
|
-
class VideoPredictionMeta(AbstractVideoPredictionMeta):
|
|
168
|
-
video = models.OneToOneField("Video", on_delete=models.CASCADE, related_name="video_prediction_meta")
|
|
169
|
-
|
|
170
|
-
def get_video_model(self):
|
|
171
|
-
return Video
|
|
172
|
-
|
|
173
|
-
def get_frame_model(self):
|
|
174
|
-
return Frame
|
|
175
|
-
|
|
176
|
-
def get_video_segment_model(self):
|
|
177
|
-
return LabelVideoSegment
|
|
178
|
-
|
|
179
|
-
def calculate_prediction_array(self, window_size_in_seconds:int=None):
|
|
180
|
-
"""
|
|
181
|
-
Fetches all predictions for this video, labelset, and model meta.
|
|
182
|
-
"""
|
|
183
|
-
video:Video = self.video
|
|
184
|
-
|
|
185
|
-
model_meta = self.model_meta
|
|
186
|
-
label_list = self.get_label_list()
|
|
187
|
-
|
|
188
|
-
prediction_array = np.zeros((video.get_frame_number, len(label_list)))
|
|
189
|
-
for i, label in enumerate(label_list):
|
|
190
|
-
# fetch all predictions for this label, video, and model meta ordered by ImageClassificationPrediction.frame.frame_number
|
|
191
|
-
predictions = ImageClassificationPrediction.objects.filter(label=label, frame__video=video, model_meta=model_meta).order_by('frame__frame_number')
|
|
192
|
-
confidences = np.array([prediction.confidence for prediction in predictions])
|
|
193
|
-
smooth_confidences = self.apply_running_mean(confidences, window_size_in_seconds)
|
|
194
|
-
# calculate binary predictions
|
|
195
|
-
binary_predictions = smooth_confidences > 0.5
|
|
196
|
-
# add to prediction array
|
|
197
|
-
prediction_array[:, i] = binary_predictions
|
|
198
|
-
|
|
199
|
-
# save prediction array
|
|
200
|
-
self.save_prediction_array(prediction_array)
|
|
201
|
-
|
|
202
|
-
|
|
203
|
-
class LegacyVideoPredictionMeta(AbstractVideoPredictionMeta):
|
|
204
|
-
video = models.OneToOneField("LegacyVideo", on_delete=models.CASCADE, related_name="video_prediction_meta")
|
|
205
|
-
|
|
206
|
-
def get_video_model(self):
|
|
207
|
-
return LegacyVideo
|
|
208
|
-
|
|
209
|
-
def get_frame_model(self):
|
|
210
|
-
return LegacyFrame
|
|
211
|
-
|
|
212
|
-
def get_video_segment_model(self):
|
|
213
|
-
return LegacyLabelVideoSegment
|
|
214
|
-
|
|
215
|
-
def calculate_prediction_array(self, window_size_in_seconds:int=None):
|
|
216
|
-
"""
|
|
217
|
-
Fetches all predictions for this video, labelset, and model meta.
|
|
218
|
-
"""
|
|
219
|
-
video:LegacyVideo = self.video
|
|
220
|
-
|
|
221
|
-
model_meta = self.model_meta
|
|
222
|
-
label_list = self.get_label_list()
|
|
223
|
-
|
|
224
|
-
prediction_array = np.zeros((video.get_frame_number, len(label_list)))
|
|
225
|
-
for i, label in enumerate(label_list):
|
|
226
|
-
# fetch all predictions for this label, video, and model meta ordered by ImageClassificationPrediction.frame.frame_number
|
|
227
|
-
predictions = ImageClassificationPrediction.objects.filter(label=label, legacy_frame__video=video, model_meta=model_meta).order_by('legacy_frame__frame_number')
|
|
228
|
-
confidences = np.array([prediction.confidence for prediction in predictions])
|
|
229
|
-
smooth_confidences = self.apply_running_mean(confidences, window_size_in_seconds)
|
|
230
|
-
# calculate binary predictions
|
|
231
|
-
binary_predictions = smooth_confidences > 0.5
|
|
232
|
-
# add to prediction array
|
|
233
|
-
prediction_array[:, i] = binary_predictions
|
|
234
|
-
|
|
235
|
-
# save prediction array
|
|
236
|
-
self.save_prediction_array(prediction_array)
|
|
237
|
-
|
|
238
|
-
|
|
239
|
-
|
|
240
|
-
|
|
241
|
-
|
|
242
|
-
|
|
243
|
-
|
|
244
|
-
|
|
@@ -1,97 +0,0 @@
|
|
|
1
|
-
from django.db import models
|
|
2
|
-
|
|
3
|
-
class ProductManager(models.Manager):
|
|
4
|
-
def get_by_natural_key(self, name):
|
|
5
|
-
return self.get(name=name)
|
|
6
|
-
|
|
7
|
-
def sum_weights(product_materials):
|
|
8
|
-
# sum up the weights
|
|
9
|
-
weight = 0
|
|
10
|
-
reference_unit = None
|
|
11
|
-
for product_material in product_materials:
|
|
12
|
-
if not reference_unit:
|
|
13
|
-
reference_unit = product_material.unit
|
|
14
|
-
else:
|
|
15
|
-
assert reference_unit == product_material.unit, "ProductMaterial units do not match"
|
|
16
|
-
weight += product_material.quantity
|
|
17
|
-
|
|
18
|
-
return weight, reference_unit
|
|
19
|
-
|
|
20
|
-
def sum_emissions(product_materials):
|
|
21
|
-
# sum up the emissions
|
|
22
|
-
emission = 0
|
|
23
|
-
reference_unit = None
|
|
24
|
-
for product_material in product_materials:
|
|
25
|
-
if not reference_unit:
|
|
26
|
-
reference_unit = product_material.unit
|
|
27
|
-
else:
|
|
28
|
-
assert reference_unit == product_material.unit, "ProductMaterial units do not match"
|
|
29
|
-
emission, emission_unit = product_material.get_emission()
|
|
30
|
-
assert reference_unit == emission_unit, "ProductMaterial units do not match"
|
|
31
|
-
emission += emission
|
|
32
|
-
|
|
33
|
-
return emission, reference_unit
|
|
34
|
-
|
|
35
|
-
class Product(models.Model):
|
|
36
|
-
objects = ProductManager()
|
|
37
|
-
|
|
38
|
-
name = models.CharField(max_length=255)
|
|
39
|
-
name_de = models.CharField(max_length=255, null=True)
|
|
40
|
-
name_en = models.CharField(max_length=255, null=True)
|
|
41
|
-
|
|
42
|
-
transport_route = models.ForeignKey("TransportRoute", on_delete=models.SET_NULL, null=True)
|
|
43
|
-
product_group = models.ForeignKey("ProductGroup", on_delete=models.SET_NULL, null=True)
|
|
44
|
-
|
|
45
|
-
def natural_key(self):
|
|
46
|
-
return (self.name,)
|
|
47
|
-
|
|
48
|
-
def __str__(self):
|
|
49
|
-
return self.name
|
|
50
|
-
|
|
51
|
-
def get_product_weight(self):
|
|
52
|
-
# check if there is a product material weight
|
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from .product_material import ProductMaterial
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product_materials = ProductMaterial.objects.filter(product=self, component="product")
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if product_materials:
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return self.get_product_material_weight()
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# check if there is a product weight
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#TODO
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def get_package_weight(self):
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# check if there is a package material weight
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from .product_material import ProductMaterial
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64
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product_materials = ProductMaterial.objects.filter(product=self, component="package")
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if product_materials:
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return self.get_package_material_weight()
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# check if there is a package weight
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#TODO
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71
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def get_product_material_weight(self):
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# get all materials with component == "product"
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from .product_material import ProductMaterial
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product_materials = ProductMaterial.objects.filter(product=self, component="product")
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76
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return sum_weights(product_materials)
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78
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def get_package_material_weight(self):
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# get all materials with component == "package"
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from .product_material import ProductMaterial
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product_materials = ProductMaterial.objects.filter(product=self, component="package")
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83
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return sum_weights(product_materials)
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85
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def get_product_material_emission(self):
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# get all materials with component == "product"
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87
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from .product_material import ProductMaterial
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88
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product_materials = ProductMaterial.objects.filter(product=self, component="product")
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90
|
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return sum_emissions(product_materials)
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91
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92
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def get_package_material_emission(self):
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93
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# get all materials with component == "package"
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94
|
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from .product_material import ProductMaterial
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95
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product_materials = ProductMaterial.objects.filter(product=self, component="package")
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97
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return sum_emissions(product_materials)
|
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@@ -1,19 +0,0 @@
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1
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from django.db import models
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2
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3
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class ProductGroupManager(models.Manager):
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4
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def get_by_natural_key(self, name):
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5
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return self.get(name=name)
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6
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7
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class ProductGroup(models.Model):
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8
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objects = ProductGroupManager()
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9
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-
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10
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name = models.CharField(max_length=255)
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11
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name_de = models.CharField(max_length=255, null=True)
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12
|
-
name_en = models.CharField(max_length=255, null=True)
|
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13
|
-
|
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14
|
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def natural_key(self):
|
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15
|
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return (self.name,)
|
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16
|
-
|
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17
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def __str__(self):
|
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18
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return self.name
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19
|
-
|
|
@@ -1,24 +0,0 @@
|
|
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1
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-
from django.db import models
|
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2
|
-
|
|
3
|
-
class ProductMaterial(models.Model):
|
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4
|
-
component = models.CharField(max_length=255)
|
|
5
|
-
material = models.ForeignKey("Material", on_delete=models.CASCADE)
|
|
6
|
-
product = models.ForeignKey("Product", on_delete=models.CASCADE, related_name="product_materials")
|
|
7
|
-
unit = models.ForeignKey("Unit", on_delete=models.CASCADE)
|
|
8
|
-
quantity = models.FloatField()
|
|
9
|
-
|
|
10
|
-
def get_emission(self):
|
|
11
|
-
from ..emission import EmissionFactor
|
|
12
|
-
emission_factor:EmissionFactor = self.material.emission_factor
|
|
13
|
-
if emission_factor is None:
|
|
14
|
-
raise Exception("No emission factor for material " + self.material.name + " found.")
|
|
15
|
-
|
|
16
|
-
# make sure product_material.unit is the same as emission_factor.unit
|
|
17
|
-
if self.unit != emission_factor.unit:
|
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18
|
-
raise Exception("Unit mismatch: " + self.unit.name + " != " + emission_factor.unit.name)
|
|
19
|
-
|
|
20
|
-
emmision_value = emission_factor.value * self.quantity
|
|
21
|
-
emission_unit = emission_factor.unit
|
|
22
|
-
return emmision_value, emission_unit
|
|
23
|
-
|
|
24
|
-
|
|
@@ -1,26 +0,0 @@
|
|
|
1
|
-
from django.db import models
|
|
2
|
-
import pandas as pd
|
|
3
|
-
|
|
4
|
-
class ProductWeightManager(models.Manager):
|
|
5
|
-
def get_by_natural_key(self, product, product_group, weight):
|
|
6
|
-
return self.get(product=product, product_group=product_group, weight=weight)
|
|
7
|
-
|
|
8
|
-
class ProductWeight(models.Model):
|
|
9
|
-
objects = ProductWeightManager()
|
|
10
|
-
|
|
11
|
-
name = models.CharField(max_length=255, null = True)
|
|
12
|
-
product = models.ForeignKey("Product", on_delete=models.CASCADE)
|
|
13
|
-
measured = models.FloatField(null=True)
|
|
14
|
-
verified = models.FloatField(null=True)
|
|
15
|
-
manufacturer = models.FloatField(null=True)
|
|
16
|
-
unit = models.ForeignKey("Unit", on_delete=models.SET_NULL, null=True)
|
|
17
|
-
|
|
18
|
-
def get_weight(self):
|
|
19
|
-
if not pd.isnull(self.verified):
|
|
20
|
-
return self.verified
|
|
21
|
-
elif not pd.isnull(self.measured):
|
|
22
|
-
return self.measured
|
|
23
|
-
elif not pd.isnull(self.manufacturer):
|
|
24
|
-
return self.manufacturer
|
|
25
|
-
else:
|
|
26
|
-
return None
|
|
@@ -1,99 +0,0 @@
|
|
|
1
|
-
from django.db import models
|
|
2
|
-
from typing import List
|
|
3
|
-
|
|
4
|
-
class ReferenceProductManager(models.Manager):
|
|
5
|
-
def get_by_natural_key(self, product_name:str, product_group_name:str):
|
|
6
|
-
return self.get(product__name=product_name, product_group__name=product_group_name)
|
|
7
|
-
|
|
8
|
-
class ReferenceProduct(models.Model):
|
|
9
|
-
name = models.CharField(max_length=255)
|
|
10
|
-
product = models.ForeignKey("Product", on_delete=models.CASCADE)
|
|
11
|
-
product_group = models.OneToOneField("ProductGroup", on_delete=models.CASCADE, related_name="reference_product")
|
|
12
|
-
emission_factor_total = models.ForeignKey("EmissionFactor", on_delete=models.SET_NULL, null=True, blank = True)
|
|
13
|
-
emission_factor_package = models.ForeignKey("EmissionFactor", on_delete=models.SET_NULL, null=True, related_name="reference_product_package")
|
|
14
|
-
emission_factor_product = models.ForeignKey("EmissionFactor", on_delete=models.SET_NULL, null=True, related_name="reference_product_product")
|
|
15
|
-
|
|
16
|
-
objects = ReferenceProductManager()
|
|
17
|
-
|
|
18
|
-
def __str__(self):
|
|
19
|
-
return self.product.name + " (" + self.product_group.name + ")"
|
|
20
|
-
|
|
21
|
-
def set_emission_factors(self):
|
|
22
|
-
from .product import Product
|
|
23
|
-
from .product_material import ProductMaterial
|
|
24
|
-
from ..emission import EmissionFactor
|
|
25
|
-
|
|
26
|
-
product:Product = self.product
|
|
27
|
-
materials = product.product_materials.all()
|
|
28
|
-
emission_factor_name = f"{self.product_group.name}_{product.name}_total_emission_factor"
|
|
29
|
-
emission_factor_package_name = f"{self.product_group.name}_{product.name}_package_emission_factor"
|
|
30
|
-
emission_factor_product_name = f"{self.product_group.name}_{product.name}_product_emission_factor"
|
|
31
|
-
|
|
32
|
-
product_emissions = 0
|
|
33
|
-
package_emissions = 0
|
|
34
|
-
|
|
35
|
-
product_weight, product_weight_unit = product.get_product_material_weight()
|
|
36
|
-
package_weight, package_weight_unit = product.get_package_material_weight()
|
|
37
|
-
product_emission, product_emission_unit = product.get_product_material_emission()
|
|
38
|
-
package_emission, package_emission_unit = product.get_package_material_emission()
|
|
39
|
-
|
|
40
|
-
total_weight = product_weight + package_weight
|
|
41
|
-
total_emission = product_emission + package_emission
|
|
42
|
-
|
|
43
|
-
reference_unit = product_weight_unit
|
|
44
|
-
assert reference_unit == package_weight_unit, "Package weight units do not match"
|
|
45
|
-
assert reference_unit == product_emission_unit, "Product emission units do not match"
|
|
46
|
-
assert reference_unit == package_emission_unit, "Package emission units do not match"
|
|
47
|
-
|
|
48
|
-
product_emission_factor_value = product_emission / product_weight
|
|
49
|
-
package_emission_factor_value = package_emission / package_weight
|
|
50
|
-
total_emission_factor_value = total_emission / total_weight
|
|
51
|
-
|
|
52
|
-
emission_factor, created = EmissionFactor.objects.get_or_create(
|
|
53
|
-
name=emission_factor_name,
|
|
54
|
-
defaults={
|
|
55
|
-
"name": emission_factor_name,
|
|
56
|
-
"value": total_emission_factor_value,
|
|
57
|
-
"unit": reference_unit
|
|
58
|
-
}
|
|
59
|
-
)
|
|
60
|
-
self.emission_factor_total = emission_factor
|
|
61
|
-
|
|
62
|
-
emission_factor_package, created = EmissionFactor.objects.get_or_create(
|
|
63
|
-
name=emission_factor_package_name,
|
|
64
|
-
defaults={
|
|
65
|
-
"name": emission_factor_package_name,
|
|
66
|
-
"value": package_emission_factor_value,
|
|
67
|
-
"unit": reference_unit
|
|
68
|
-
}
|
|
69
|
-
)
|
|
70
|
-
self.emission_factor_package = emission_factor_package
|
|
71
|
-
|
|
72
|
-
emission_factor_product, created = EmissionFactor.objects.get_or_create(
|
|
73
|
-
name=emission_factor_product_name,
|
|
74
|
-
defaults={
|
|
75
|
-
"name": emission_factor_product_name,
|
|
76
|
-
"value": product_emission_factor_value,
|
|
77
|
-
"unit": reference_unit
|
|
78
|
-
}
|
|
79
|
-
)
|
|
80
|
-
self.emission_factor_product = emission_factor_product
|
|
81
|
-
|
|
82
|
-
self.save()
|
|
83
|
-
|
|
84
|
-
def get_emission_factor(self, component:str):
|
|
85
|
-
# check if emission_factor_total exists:
|
|
86
|
-
if self.emission_factor_total is None:
|
|
87
|
-
self.set_emission_factors()
|
|
88
|
-
|
|
89
|
-
if component == "total":
|
|
90
|
-
return self.emission_factor_total
|
|
91
|
-
elif component == "package":
|
|
92
|
-
return self.emission_factor_package
|
|
93
|
-
elif component == "product":
|
|
94
|
-
return self.emission_factor_product
|
|
95
|
-
else:
|
|
96
|
-
raise Exception("Unknown component: " + component)
|
|
97
|
-
|
|
98
|
-
|
|
99
|
-
|
|
@@ -1,114 +0,0 @@
|
|
|
1
|
-
from django.db import models
|
|
2
|
-
|
|
3
|
-
YES_NO_CHOICES = (
|
|
4
|
-
('yes', 'Ja'),
|
|
5
|
-
('no', 'Nein'),
|
|
6
|
-
)
|
|
7
|
-
|
|
8
|
-
class TtoQuestionnaire(models.Model):
|
|
9
|
-
|
|
10
|
-
# Patient Information
|
|
11
|
-
patient_name = models.CharField(max_length=255, verbose_name="Identifikation des Patienten (Name)")
|
|
12
|
-
birth_date = models.DateField(verbose_name="Geburtsdatum")
|
|
13
|
-
|
|
14
|
-
# Base documentation
|
|
15
|
-
emergency_patient = models.CharField(max_length=3, choices=YES_NO_CHOICES, verbose_name="Notfallpatient/kürzlich untersuchter Patient (Verzicht auf Team-Time-Out möglich)")
|
|
16
|
-
consent_signed = models.CharField(max_length=3, choices=YES_NO_CHOICES, verbose_name="Einverständniserklärung unterschrieben (Arzt, Patient)")
|
|
17
|
-
documents_present = models.CharField(max_length=3, choices=YES_NO_CHOICES, verbose_name="Alle Dokumente liegen vor (Labor, Befunde, etc.)")
|
|
18
|
-
communication_possible = models.CharField(max_length=3, choices=YES_NO_CHOICES, verbose_name="Kommunikation mit Patient möglich")
|
|
19
|
-
work_incapacity_certificate = models.CharField(max_length=3, choices=YES_NO_CHOICES, verbose_name="Arbeitsunfähigkeitsbescheinigung")
|
|
20
|
-
|
|
21
|
-
# priority items
|
|
22
|
-
pregnancy = models.CharField(max_length=3, choices=YES_NO_CHOICES, verbose_name="Schwangerschaft")
|
|
23
|
-
asa_classification_checked = models.CharField(max_length=3, choices=YES_NO_CHOICES, verbose_name="ASA-Klassifikation/Komorbidität geprüft")
|
|
24
|
-
previous_anesthesia_complications = models.CharField(max_length=3, choices=YES_NO_CHOICES, verbose_name="Komplikationen bei bisherigen Narkosen?")
|
|
25
|
-
last_meal_over_6_hours_ago = models.CharField(max_length=3, choices=YES_NO_CHOICES, verbose_name="Zeitpunkt letzte Mahlzeit > 6 Stunden")
|
|
26
|
-
allergies = models.CharField(max_length=3, choices=YES_NO_CHOICES, verbose_name="Allergien, welche?")
|
|
27
|
-
outpatient_accompaniment_post_sedation = models.CharField(max_length=3, choices=YES_NO_CHOICES, verbose_name="Nur bei ambulanter Vorstellung: Begleitung nach Sedierung?")
|
|
28
|
-
|
|
29
|
-
# Possessions
|
|
30
|
-
dental_prosthesis = models.BooleanField(default=False, verbose_name="Zahnprothese")
|
|
31
|
-
glasses = models.BooleanField(default=False, verbose_name="Brille")
|
|
32
|
-
implants = models.BooleanField(default=False, verbose_name="Implantate")
|
|
33
|
-
hearing_aids = models.BooleanField(default=False, verbose_name="Hörgeräte")
|
|
34
|
-
|
|
35
|
-
|
|
36
|
-
# Medical History
|
|
37
|
-
anticoagulants_ass = models.CharField(max_length=3, choices=YES_NO_CHOICES, verbose_name="Antikoagulation, ASS")
|
|
38
|
-
blood_pressure_medication = models.CharField(max_length=3, choices=YES_NO_CHOICES, verbose_name="Blutdruckmedikamente")
|
|
39
|
-
glaucoma = models.CharField(max_length=3, choices=YES_NO_CHOICES, verbose_name="Glaukom")
|
|
40
|
-
|
|
41
|
-
metal_implants = models.CharField(max_length=3, choices=YES_NO_CHOICES, verbose_name="Metallimplantate")
|
|
42
|
-
pacemaker_icd = models.CharField(max_length=3, choices=YES_NO_CHOICES, verbose_name="Herzschrittmacher/ICD")
|
|
43
|
-
|
|
44
|
-
copd = models.CharField(max_length=3, choices=YES_NO_CHOICES, verbose_name="COPD")
|
|
45
|
-
liver_cirrhosis = models.CharField(max_length=3, choices=YES_NO_CHOICES, verbose_name="Leberzirrhose")
|
|
46
|
-
|
|
47
|
-
ibd = models.CharField(max_length=3, choices=YES_NO_CHOICES, verbose_name="CED (Chronisch entzündliche Darmerkrankungen)")
|
|
48
|
-
radiation = models.CharField(max_length=3, choices=YES_NO_CHOICES, verbose_name="Bestrahlung")
|
|
49
|
-
surgeries = models.CharField(max_length=3, choices=YES_NO_CHOICES, verbose_name="OP´s")
|
|
50
|
-
|
|
51
|
-
# preflight
|
|
52
|
-
team_introduction = models.CharField(max_length=3, choices=YES_NO_CHOICES, verbose_name="Teamvorstellung mit Name und Aufgabe")
|
|
53
|
-
instruments_available = models.CharField(max_length=3, choices=YES_NO_CHOICES, verbose_name="Notwendige Instrumente vorhanden?")
|
|
54
|
-
monitoring_medications_equipment_checked = models.CharField(max_length=3, choices=YES_NO_CHOICES, verbose_name="Monitoring, Medikamente, Equipment zum Atemwegsmanagement zur Verfügung und überprüft?")
|
|
55
|
-
complete_documentation_inclusive_care_notes = models.TextField(verbose_name="Vollständige Dokumentation inklusive Hinweise für Nachsorge")
|
|
56
|
-
|
|
57
|
-
# notes
|
|
58
|
-
notes = models.TextField(verbose_name="Bemerkungen", default = "Keine Bemerkungen")
|
|
59
|
-
|
|
60
|
-
# postflight
|
|
61
|
-
specimens_secured = models.BooleanField(default=False, verbose_name="Histologische Proben gesichert")
|
|
62
|
-
patient_condition_documented = models.TextField(verbose_name="Patientenzustand dokumentiert (je nach Ausgangszustand)")
|
|
63
|
-
|
|
64
|
-
|
|
65
|
-
|
|
66
|
-
def __str__(self):
|
|
67
|
-
return f"Endoscopy Questionnaire for {self.patient_name} on {self.birth_date}"
|
|
68
|
-
|
|
69
|
-
def get_id_attributes(self):
|
|
70
|
-
_ = [self.patient_name, self.birth_date]
|
|
71
|
-
return _
|
|
72
|
-
|
|
73
|
-
def get_base_documentation_attributes(self):
|
|
74
|
-
_ = [self.emergency_patient, self.consent_signed, self.documents_present, self.communication_possible, self.work_incapacity_certificate]
|
|
75
|
-
return _
|
|
76
|
-
|
|
77
|
-
def get_priority_items_attributes(self):
|
|
78
|
-
_ = [self.pregnancy, self.asa_classification_checked, self.previous_anesthesia_complications, self.last_meal_over_6_hours_ago, self.allergies, self.outpatient_accompaniment_post_sedation]
|
|
79
|
-
return _
|
|
80
|
-
|
|
81
|
-
def get_possessions_attributes(self):
|
|
82
|
-
_ = [self.dental_prosthesis, self.glasses, self.implants, self.hearing_aids]
|
|
83
|
-
return _
|
|
84
|
-
|
|
85
|
-
def get_medical_history_attributes(self):
|
|
86
|
-
_ = [
|
|
87
|
-
self.anticoagulants_ass,
|
|
88
|
-
self.blood_pressure_medication,
|
|
89
|
-
self.glaucoma,
|
|
90
|
-
self.metal_implants,
|
|
91
|
-
self.pacemaker_icd,
|
|
92
|
-
self.copd,
|
|
93
|
-
self.liver_cirrhosis,
|
|
94
|
-
self.ibd,
|
|
95
|
-
self.radiation,
|
|
96
|
-
self.surgeries,
|
|
97
|
-
]
|
|
98
|
-
|
|
99
|
-
def get_preflight_attributes(self):
|
|
100
|
-
_ = [
|
|
101
|
-
self.team_introduction,
|
|
102
|
-
self.instruments_available,
|
|
103
|
-
self.monitoring_medications_equipment_checked,
|
|
104
|
-
]
|
|
105
|
-
|
|
106
|
-
def get_note_attributes(self):
|
|
107
|
-
_ = [self.notes]
|
|
108
|
-
|
|
109
|
-
def get_postflight_attributes(self):
|
|
110
|
-
_ = [
|
|
111
|
-
self.specimens_secured,
|
|
112
|
-
self.patient_condition_documented
|
|
113
|
-
]
|
|
114
|
-
|