desdeo 1.2__py3-none-any.whl → 2.0.0__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- desdeo/__init__.py +8 -8
- desdeo/api/README.md +73 -0
- desdeo/api/__init__.py +15 -0
- desdeo/api/app.py +40 -0
- desdeo/api/config.py +69 -0
- desdeo/api/config.toml +53 -0
- desdeo/api/db.py +25 -0
- desdeo/api/db_init.py +79 -0
- desdeo/api/db_models.py +164 -0
- desdeo/api/malaga_db_init.py +27 -0
- desdeo/api/models/__init__.py +66 -0
- desdeo/api/models/archive.py +34 -0
- desdeo/api/models/preference.py +90 -0
- desdeo/api/models/problem.py +507 -0
- desdeo/api/models/reference_point_method.py +18 -0
- desdeo/api/models/session.py +46 -0
- desdeo/api/models/state.py +96 -0
- desdeo/api/models/user.py +51 -0
- desdeo/api/routers/_NAUTILUS.py +245 -0
- desdeo/api/routers/_NAUTILUS_navigator.py +233 -0
- desdeo/api/routers/_NIMBUS.py +762 -0
- desdeo/api/routers/__init__.py +5 -0
- desdeo/api/routers/problem.py +110 -0
- desdeo/api/routers/reference_point_method.py +117 -0
- desdeo/api/routers/session.py +76 -0
- desdeo/api/routers/test.py +16 -0
- desdeo/api/routers/user_authentication.py +366 -0
- desdeo/api/schema.py +94 -0
- desdeo/api/tests/__init__.py +0 -0
- desdeo/api/tests/conftest.py +59 -0
- desdeo/api/tests/test_models.py +701 -0
- desdeo/api/tests/test_routes.py +216 -0
- desdeo/api/utils/database.py +274 -0
- desdeo/api/utils/logger.py +29 -0
- desdeo/core.py +27 -0
- desdeo/emo/__init__.py +29 -0
- desdeo/emo/hooks/archivers.py +172 -0
- desdeo/emo/methods/EAs.py +418 -0
- desdeo/emo/methods/__init__.py +0 -0
- desdeo/emo/methods/bases.py +59 -0
- desdeo/emo/operators/__init__.py +1 -0
- desdeo/emo/operators/crossover.py +780 -0
- desdeo/emo/operators/evaluator.py +118 -0
- desdeo/emo/operators/generator.py +356 -0
- desdeo/emo/operators/mutation.py +1053 -0
- desdeo/emo/operators/selection.py +1036 -0
- desdeo/emo/operators/termination.py +178 -0
- desdeo/explanations/__init__.py +6 -0
- desdeo/explanations/explainer.py +100 -0
- desdeo/explanations/utils.py +90 -0
- desdeo/mcdm/__init__.py +19 -0
- desdeo/mcdm/nautili.py +345 -0
- desdeo/mcdm/nautilus.py +477 -0
- desdeo/mcdm/nautilus_navigator.py +655 -0
- desdeo/mcdm/nimbus.py +417 -0
- desdeo/mcdm/pareto_navigator.py +269 -0
- desdeo/mcdm/reference_point_method.py +116 -0
- desdeo/problem/__init__.py +79 -0
- desdeo/problem/evaluator.py +561 -0
- desdeo/problem/gurobipy_evaluator.py +562 -0
- desdeo/problem/infix_parser.py +341 -0
- desdeo/problem/json_parser.py +944 -0
- desdeo/problem/pyomo_evaluator.py +468 -0
- desdeo/problem/schema.py +1808 -0
- desdeo/problem/simulator_evaluator.py +298 -0
- desdeo/problem/sympy_evaluator.py +244 -0
- desdeo/problem/testproblems/__init__.py +73 -0
- desdeo/problem/testproblems/binh_and_korn_problem.py +88 -0
- desdeo/problem/testproblems/dtlz2_problem.py +102 -0
- desdeo/problem/testproblems/forest_problem.py +275 -0
- desdeo/problem/testproblems/knapsack_problem.py +163 -0
- desdeo/problem/testproblems/mcwb_problem.py +831 -0
- desdeo/problem/testproblems/mixed_variable_dimenrions_problem.py +83 -0
- desdeo/problem/testproblems/momip_problem.py +172 -0
- desdeo/problem/testproblems/nimbus_problem.py +143 -0
- desdeo/problem/testproblems/pareto_navigator_problem.py +89 -0
- desdeo/problem/testproblems/re_problem.py +492 -0
- desdeo/problem/testproblems/river_pollution_problem.py +434 -0
- desdeo/problem/testproblems/rocket_injector_design_problem.py +140 -0
- desdeo/problem/testproblems/simple_problem.py +351 -0
- desdeo/problem/testproblems/simulator_problem.py +92 -0
- desdeo/problem/testproblems/spanish_sustainability_problem.py +945 -0
- desdeo/problem/testproblems/zdt_problem.py +271 -0
- desdeo/problem/utils.py +245 -0
- desdeo/tools/GenerateReferencePoints.py +181 -0
- desdeo/tools/__init__.py +102 -0
- desdeo/tools/generics.py +145 -0
- desdeo/tools/gurobipy_solver_interfaces.py +258 -0
- desdeo/tools/indicators_binary.py +11 -0
- desdeo/tools/indicators_unary.py +375 -0
- desdeo/tools/interaction_schema.py +38 -0
- desdeo/tools/intersection.py +54 -0
- desdeo/tools/iterative_pareto_representer.py +99 -0
- desdeo/tools/message.py +234 -0
- desdeo/tools/ng_solver_interfaces.py +199 -0
- desdeo/tools/non_dominated_sorting.py +133 -0
- desdeo/tools/patterns.py +281 -0
- desdeo/tools/proximal_solver.py +99 -0
- desdeo/tools/pyomo_solver_interfaces.py +464 -0
- desdeo/tools/reference_vectors.py +462 -0
- desdeo/tools/scalarization.py +3138 -0
- desdeo/tools/scipy_solver_interfaces.py +454 -0
- desdeo/tools/score_bands.py +464 -0
- desdeo/tools/utils.py +320 -0
- desdeo/utopia_stuff/__init__.py +0 -0
- desdeo/utopia_stuff/data/1.json +15 -0
- desdeo/utopia_stuff/data/2.json +13 -0
- desdeo/utopia_stuff/data/3.json +15 -0
- desdeo/utopia_stuff/data/4.json +17 -0
- desdeo/utopia_stuff/data/5.json +15 -0
- desdeo/utopia_stuff/from_json.py +40 -0
- desdeo/utopia_stuff/reinit_user.py +38 -0
- desdeo/utopia_stuff/utopia_db_init.py +212 -0
- desdeo/utopia_stuff/utopia_problem.py +403 -0
- desdeo/utopia_stuff/utopia_problem_old.py +415 -0
- desdeo/utopia_stuff/utopia_reference_solutions.py +79 -0
- desdeo-2.0.0.dist-info/LICENSE +21 -0
- desdeo-2.0.0.dist-info/METADATA +168 -0
- desdeo-2.0.0.dist-info/RECORD +120 -0
- {desdeo-1.2.dist-info → desdeo-2.0.0.dist-info}/WHEEL +1 -1
- desdeo-1.2.dist-info/METADATA +0 -16
- desdeo-1.2.dist-info/RECORD +0 -4
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import math
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import numpy as np
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from pathlib import Path
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import polars as pl
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from desdeo.problem.schema import (
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Constant,
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Constraint,
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ConstraintTypeEnum,
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DiscreteRepresentation,
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ExtraFunction,
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Objective,
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ObjectiveTypeEnum,
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Problem,
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TensorConstant,
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TensorVariable,
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Variable,
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VariableTypeEnum,
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)
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from desdeo.tools.utils import available_solvers, payoff_table_method
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def utopia_problem_old(problem_name: str = "Forest problem", holding: int = 1) -> tuple[Problem, dict]:
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r"""Defines a test forest problem that has TensorConstants and TensorVariables.
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The problem has TensorConstants V, W and P as vectors taking values from a data file and
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TensorVariables X_n, where n is the number of units in the data, as vectors matching the constants in shape.
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The variables are binary and each variable vector X_i has one variable with the value 1 while others have value 0.
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The variable with the value 1 for each vector X_i represents the optimal plan for the corresponding unit i.
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The three objective functions f_1, f_2, f_3 represent the net present value, wood volume at the end of
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the planning period, and the profit from harvesting.
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All of the objective functions are to be maximized.
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The problem is defined as follows:
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\begin{align}
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\mbox{maximize~} & \sum_{j=1}^N\sum_{i \in I_j} v_{ij} x_{ij} & \\
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\mbox{maximize~} & \sum_{j=1}^N\sum_{i \in I_j} w_{ij} x_{ij} & \\
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\mbox{maximize~} & \sum_{j=1}^N\sum_{i \in I_j} p_{ij} x_{ij} & \\
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\nonumber\\
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\mbox{subject to~} & \sum\limits_{i \in I_j} x_{ij} = 1, & \forall j = 1 \ldots N \\
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& x_{ij}\in \{0,1\}& \forall j = 1 \ldots N, ~\forall i\in I_j,
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\end{align}
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where $x_{ij}$ are decision variables representing the choice of implementing management plan $i$ in stand $j$,
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and $I_j$ is the set of available management plans for stand $j$. For each plan $i$ in stand $j$
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the net present value, wood volume at the end of the planning period, and the profit from harvesting
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are represented by $v_{ij}$, $w_{ij}$, and $p_{ij}$ respectively.
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Args:
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holding (int, optional): The number of the holding to be optimized. Defaults to 1.
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comparing (bool, optional): Determines if solutions are to be compared to those from the rahti app.
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Defaults to None.
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Returns:
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Problem: An instance of the test forest problem.
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"""
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# TODO: remove this at some point
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comparing = False
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schedule_dict = {}
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discounting_factor = 3 # This can be 1, 2, 3, 4 or 5. It represents %
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discounting = [
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(1 - 0.01 * discounting_factor) ** 3,
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(1 - 0.01 * discounting_factor) ** 8,
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(1 - 0.01 * discounting_factor) ** 13,
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]
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df = pl.read_csv(Path("tests/data/alternatives_290124.csv"), dtypes={"unit": pl.Float64})
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df_key = pl.read_csv(Path("tests/data/alternatives_key_290124.csv"), dtypes={"unit": pl.Float64})
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selected_df_v = df.filter(pl.col("holding") == holding).select(
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["unit", "schedule", f"npv_{discounting_factor}_percent"]
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)
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unique_units = selected_df_v.unique(["unit"], maintain_order=True).get_column("unit")
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selected_df_v.group_by(["unit", "schedule"])
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rows_by_key = selected_df_v.rows_by_key(key=["unit", "schedule"])
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v_array = np.zeros((selected_df_v["unit"].n_unique(), selected_df_v["schedule"].n_unique()))
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for i in range(np.shape(v_array)[0]):
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for j in range(np.shape(v_array)[1]):
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if (unique_units[i], j) in rows_by_key:
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v_array[i][j] = rows_by_key[(unique_units[i], j)][0][0]
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# determine whether the results are to be compared to those from the rahti app (for testing purposes)
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# if compared, the stock values are calculated by substacting the value after 2025 period from
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# the value after the 2035 period (in other words, last value - first value)
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if comparing:
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selected_df_w = df.filter(pl.col("holding") == holding).select(["unit", "schedule", "stock_2025", "stock_2035"])
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selected_df_w.group_by(["unit", "schedule"])
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rows_by_key = selected_df_w.rows_by_key(key=["unit", "schedule"])
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selected_df_key_w = df_key.select(["unit", "schedule", "treatment"])
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selected_df_key_w.group_by(["unit", "schedule"])
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rows_by_key_df_key = selected_df_key_w.rows_by_key(key=["unit", "schedule"])
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w_array = np.zeros((selected_df_w["unit"].n_unique(), selected_df_w["schedule"].n_unique()))
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for i in range(np.shape(w_array)[0]):
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for j in range(np.shape(w_array)[1]):
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if len(rows_by_key_df_key[(unique_units[i], j)]) == 0:
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continue
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if (unique_units[i], j) in rows_by_key:
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w_array[i][j] = rows_by_key[(unique_units[i], j)][0][1] - rows_by_key[(unique_units[i], j)][0][0]
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else:
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selected_df_w = df.filter(pl.col("holding") == holding).select(["unit", "schedule", "stock_2035"])
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selected_df_w.group_by(["unit", "schedule"])
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rows_by_key = selected_df_w.rows_by_key(key=["unit", "schedule"])
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selected_df_key_w = df_key.select(["unit", "schedule", "treatment"])
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selected_df_key_w.group_by(["unit", "schedule"])
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rows_by_key_df_key = selected_df_key_w.rows_by_key(key=["unit", "schedule"])
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w_array = np.zeros((selected_df_w["unit"].n_unique(), selected_df_w["schedule"].n_unique()))
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for i in range(np.shape(w_array)[0]):
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for j in range(np.shape(w_array)[1]):
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if len(rows_by_key_df_key[(unique_units[i], j)]) == 0:
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continue
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if (unique_units[i], j) in rows_by_key:
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w_array[i][j] = rows_by_key[(unique_units[i], j)][0][0]
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"""
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selected_df_p = df.filter(pl.col("holding") == holding).select(
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["unit", "schedule", "harvest_value_period_2025", "harvest_value_period_2030", "harvest_value_period_2035"]
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)
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selected_df_p.group_by(["unit", "schedule"])
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rows_by_key = selected_df_p.rows_by_key(key=["unit", "schedule"])
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p_array = np.zeros((selected_df_p["unit"].n_unique(), selected_df_p["schedule"].n_unique()))
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discounting = [0.95**5, 0.95**10, 0.95**15]
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for i in range(np.shape(p_array)[0]):
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for j in range(np.shape(p_array)[1]):
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if (unique_units[i], j) in rows_by_key:
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p_array[i][j] = (
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sum(x * y for x, y in zip(rows_by_key[(unique_units[i], j)][0], discounting, strict=True)) + 1e-6
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) # the 1E-6 is to deal with an annoying corner case, don't worry about it
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v_array[i][j] += p_array[i][j]
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"""
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selected_df_p1 = df.filter(pl.col("holding") == holding).select(["unit", "schedule", "harvest_value_period_2025"])
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selected_df_p1.group_by(["unit", "schedule"])
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rows_by_key = selected_df_p1.rows_by_key(key=["unit", "schedule"])
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p1_array = np.zeros((selected_df_p1["unit"].n_unique(), selected_df_p1["schedule"].n_unique()))
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for i in range(np.shape(p1_array)[0]):
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for j in range(np.shape(p1_array)[1]):
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if (unique_units[i], j) in rows_by_key:
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p1_array[i][j] = rows_by_key[(unique_units[i], j)][0][0] + 1e-6
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selected_df_p2 = df.filter(pl.col("holding") == holding).select(["unit", "schedule", "harvest_value_period_2030"])
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selected_df_p2.group_by(["unit", "schedule"])
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rows_by_key = selected_df_p2.rows_by_key(key=["unit", "schedule"])
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p2_array = np.zeros((selected_df_p2["unit"].n_unique(), selected_df_p2["schedule"].n_unique()))
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for i in range(np.shape(p2_array)[0]):
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for j in range(np.shape(p2_array)[1]):
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if (unique_units[i], j) in rows_by_key:
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p2_array[i][j] = rows_by_key[(unique_units[i], j)][0][0] + 1e-6
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selected_df_p3 = df.filter(pl.col("holding") == holding).select(["unit", "schedule", "harvest_value_period_2035"])
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selected_df_p3.group_by(["unit", "schedule"])
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rows_by_key = selected_df_p3.rows_by_key(key=["unit", "schedule"])
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p3_array = np.zeros((selected_df_p3["unit"].n_unique(), selected_df_p3["schedule"].n_unique()))
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for i in range(np.shape(p3_array)[0]):
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for j in range(np.shape(p3_array)[1]):
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if (unique_units[i], j) in rows_by_key:
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p3_array[i][j] = rows_by_key[(unique_units[i], j)][0][0] + 1e-6
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constants = []
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variables = []
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constraints = []
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f_1_func = []
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f_2_func = []
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p1_func = []
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p2_func = []
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p3_func = []
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# define the constants V, W and P, decision variable X, constraints, and objective function expressions in one loop
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for i in range(np.shape(v_array)[0]):
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# Constants V, W and P
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v = TensorConstant(
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name=f"V_{i+1}",
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symbol=f"V_{i+1}",
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shape=[np.shape(v_array)[1]], # NOTE: vectors have to be of form [2] instead of [2,1] or [1,2]
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values=v_array[i].tolist(),
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)
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constants.append(v)
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178
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w = TensorConstant(
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name=f"W_{i+1}",
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+
symbol=f"W_{i+1}",
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+
shape=[np.shape(w_array)[1]], # NOTE: vectors have to be of form [2] instead of [2,1] or [1,2]
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+
values=w_array[i].tolist(),
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+
)
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constants.append(w)
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185
|
+
p1 = TensorConstant(
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name=f"P1_{i+1}",
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+
symbol=f"P1_{i+1}",
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+
shape=[np.shape(p1_array)[1]], # NOTE: vectors have to be of form [2] instead of [2,1] or [1,2]
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189
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+
values=p1_array[i].tolist(),
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+
)
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+
constants.append(p1)
|
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192
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+
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193
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+
p2 = TensorConstant(
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+
name=f"P2_{i+1}",
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+
symbol=f"P2_{i+1}",
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+
shape=[np.shape(p2_array)[1]], # NOTE: vectors have to be of form [2] instead of [2,1] or [1,2]
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values=p2_array[i].tolist(),
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+
)
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constants.append(p2)
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+
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201
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+
p3 = TensorConstant(
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name=f"P3_{i+1}",
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+
symbol=f"P3_{i+1}",
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+
shape=[np.shape(p3_array)[1]], # NOTE: vectors have to be of form [2] instead of [2,1] or [1,2]
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+
values=p3_array[i].tolist(),
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+
)
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+
constants.append(p3)
|
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+
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209
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+
# Decision variable X
|
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x = TensorVariable(
|
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+
name=f"X_{i+1}",
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+
symbol=f"X_{i+1}",
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+
variable_type=VariableTypeEnum.binary,
|
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+
shape=[np.shape(v_array)[1]], # NOTE: vectors have to be of form [2] instead of [2,1] or [1,2]
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215
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+
lowerbounds=np.shape(v_array)[1] * [0],
|
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+
upperbounds=np.shape(v_array)[1] * [1],
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217
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+
initial_values=np.shape(v_array)[1] * [0],
|
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+
)
|
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+
variables.append(x)
|
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220
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+
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221
|
+
# Fill out the dict with information about treatments associated with X_{i+1}
|
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+
treatment_list = (
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+
df_key.filter((pl.col("holding") == holding) & (pl.col("unit") == unique_units[i]))
|
|
224
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+
.get_column("treatment")
|
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+
.to_list()
|
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+
)
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|
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+
schedule_dict[f"X_{i+1}"] = dict(zip(range(len(treatment_list)), treatment_list, strict=True))
|
|
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|
+
schedule_dict[f"X_{i+1}"]["unit"] = unique_units[i]
|
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229
|
+
|
|
230
|
+
# Constraints
|
|
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+
con = Constraint(
|
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|
+
name=f"x_con_{i+1}",
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233
|
+
symbol=f"x_con_{i+1}",
|
|
234
|
+
cons_type=ConstraintTypeEnum.EQ,
|
|
235
|
+
func=f"Sum(X_{i+1}) - 1",
|
|
236
|
+
is_twice_differentiable=True,
|
|
237
|
+
)
|
|
238
|
+
constraints.append(con)
|
|
239
|
+
|
|
240
|
+
# Objective function expressions
|
|
241
|
+
exprs = f"V_{i+1}@X_{i+1}"
|
|
242
|
+
f_1_func.append(exprs)
|
|
243
|
+
|
|
244
|
+
exprs = f"W_{i+1}@X_{i+1}"
|
|
245
|
+
f_2_func.append(exprs)
|
|
246
|
+
|
|
247
|
+
exprs = f"P1_{i+1}@X_{i+1}"
|
|
248
|
+
p1_func.append(exprs)
|
|
249
|
+
|
|
250
|
+
exprs = f"P2_{i+1}@X_{i+1}"
|
|
251
|
+
p2_func.append(exprs)
|
|
252
|
+
|
|
253
|
+
exprs = f"P3_{i+1}@X_{i+1}"
|
|
254
|
+
p3_func.append(exprs)
|
|
255
|
+
|
|
256
|
+
for i in range(1, 4):
|
|
257
|
+
pvar = Variable(name=f"P_{i}", symbol=f"P_{i}", variable_type=VariableTypeEnum.real, lowerbound=0)
|
|
258
|
+
variables.append(pvar)
|
|
259
|
+
|
|
260
|
+
vvar = Variable(name="V_end", symbol="V_end", variable_type=VariableTypeEnum.real, lowerbound=0)
|
|
261
|
+
variables.append(vvar)
|
|
262
|
+
|
|
263
|
+
# get the remainder value of the forest into decision variable V_end
|
|
264
|
+
v_func = "V_end - " + " - ".join(f_1_func)
|
|
265
|
+
con = Constraint(
|
|
266
|
+
name="v_con",
|
|
267
|
+
symbol="v_con",
|
|
268
|
+
cons_type=ConstraintTypeEnum.EQ,
|
|
269
|
+
func=v_func,
|
|
270
|
+
is_twice_differentiable=True,
|
|
271
|
+
)
|
|
272
|
+
constraints.append(con)
|
|
273
|
+
|
|
274
|
+
# These are here, so that we can get the harvesting incomes into decision variables P_i
|
|
275
|
+
p1_func = "P_1 - " + " - ".join(p1_func)
|
|
276
|
+
con = Constraint(
|
|
277
|
+
name="p1_con",
|
|
278
|
+
symbol="p1_con",
|
|
279
|
+
cons_type=ConstraintTypeEnum.EQ,
|
|
280
|
+
func=p1_func,
|
|
281
|
+
is_twice_differentiable=True,
|
|
282
|
+
)
|
|
283
|
+
constraints.append(con)
|
|
284
|
+
|
|
285
|
+
p2_func = "P_2 - " + " - ".join(p2_func)
|
|
286
|
+
con = Constraint(
|
|
287
|
+
name="p2_con",
|
|
288
|
+
symbol="p2_con",
|
|
289
|
+
cons_type=ConstraintTypeEnum.EQ,
|
|
290
|
+
func=p2_func,
|
|
291
|
+
is_twice_differentiable=True,
|
|
292
|
+
)
|
|
293
|
+
constraints.append(con)
|
|
294
|
+
|
|
295
|
+
p3_func = "P_3 - " + " - ".join(p3_func)
|
|
296
|
+
con = Constraint(
|
|
297
|
+
name="p3_con",
|
|
298
|
+
symbol="p3_con",
|
|
299
|
+
cons_type=ConstraintTypeEnum.EQ,
|
|
300
|
+
func=p3_func,
|
|
301
|
+
is_twice_differentiable=True,
|
|
302
|
+
)
|
|
303
|
+
constraints.append(con)
|
|
304
|
+
|
|
305
|
+
# print(v_func)
|
|
306
|
+
# print(p1_func)
|
|
307
|
+
# print(p2_func)
|
|
308
|
+
# print(p3_func)
|
|
309
|
+
|
|
310
|
+
# form the objective function sums
|
|
311
|
+
f_2_func = " + ".join(f_2_func)
|
|
312
|
+
f_3_func = f"{discounting[0]} * P_1 + {discounting[1]} * P_2 + {discounting[2]} * P_3"
|
|
313
|
+
f_1_func = "V_end + " + f_3_func
|
|
314
|
+
|
|
315
|
+
# print(f_1_func)
|
|
316
|
+
# print(f_2_func)
|
|
317
|
+
# print(f_3_func)
|
|
318
|
+
|
|
319
|
+
f_1 = Objective(
|
|
320
|
+
name="Net present value",
|
|
321
|
+
symbol="f_1",
|
|
322
|
+
func=f_1_func,
|
|
323
|
+
maximize=True,
|
|
324
|
+
objective_type=ObjectiveTypeEnum.analytical,
|
|
325
|
+
is_linear=True,
|
|
326
|
+
is_convex=False, # not checked
|
|
327
|
+
is_twice_differentiable=True,
|
|
328
|
+
)
|
|
329
|
+
|
|
330
|
+
f_2 = Objective(
|
|
331
|
+
name="Wood stock volume",
|
|
332
|
+
symbol="f_2",
|
|
333
|
+
func=f_2_func,
|
|
334
|
+
maximize=True,
|
|
335
|
+
objective_type=ObjectiveTypeEnum.analytical,
|
|
336
|
+
is_linear=True,
|
|
337
|
+
is_convex=False, # not checked
|
|
338
|
+
is_twice_differentiable=True,
|
|
339
|
+
)
|
|
340
|
+
|
|
341
|
+
f_3 = Objective(
|
|
342
|
+
name="Harvest value",
|
|
343
|
+
symbol="f_3",
|
|
344
|
+
func=f_3_func,
|
|
345
|
+
maximize=True,
|
|
346
|
+
objective_type=ObjectiveTypeEnum.analytical,
|
|
347
|
+
is_linear=True,
|
|
348
|
+
is_convex=False, # not checked
|
|
349
|
+
is_twice_differentiable=True,
|
|
350
|
+
)
|
|
351
|
+
|
|
352
|
+
# This is so bad, but we currently don't have a better way
|
|
353
|
+
ideals, nadirs = payoff_table_method(
|
|
354
|
+
problem=Problem(
|
|
355
|
+
name=problem_name,
|
|
356
|
+
description="A test forest problem.",
|
|
357
|
+
constants=constants,
|
|
358
|
+
variables=variables,
|
|
359
|
+
objectives=[f_1, f_2, f_3],
|
|
360
|
+
constraints=constraints,
|
|
361
|
+
),
|
|
362
|
+
solver=available_solvers["gurobipy"],
|
|
363
|
+
)
|
|
364
|
+
|
|
365
|
+
print(ideals)
|
|
366
|
+
print(nadirs)
|
|
367
|
+
|
|
368
|
+
f_1 = Objective(
|
|
369
|
+
name="Nettonykyarvo / €",
|
|
370
|
+
symbol="f_1",
|
|
371
|
+
func=f_1_func,
|
|
372
|
+
maximize=True,
|
|
373
|
+
ideal=math.ceil(ideals["f_1"]),
|
|
374
|
+
nadir=math.floor(nadirs["f_1"]),
|
|
375
|
+
objective_type=ObjectiveTypeEnum.analytical,
|
|
376
|
+
is_linear=True,
|
|
377
|
+
is_convex=False, # not checked
|
|
378
|
+
is_twice_differentiable=True,
|
|
379
|
+
)
|
|
380
|
+
|
|
381
|
+
f_2 = Objective(
|
|
382
|
+
name="Puuston tilavuus / m^3",
|
|
383
|
+
symbol="f_2",
|
|
384
|
+
func=f_2_func,
|
|
385
|
+
maximize=True,
|
|
386
|
+
ideal=math.ceil(ideals["f_2"]),
|
|
387
|
+
nadir=math.floor(nadirs["f_2"]),
|
|
388
|
+
objective_type=ObjectiveTypeEnum.analytical,
|
|
389
|
+
is_linear=True,
|
|
390
|
+
is_convex=False, # not checked
|
|
391
|
+
is_twice_differentiable=True,
|
|
392
|
+
)
|
|
393
|
+
|
|
394
|
+
f_3 = Objective(
|
|
395
|
+
name="Hakkuiden tuotto / €",
|
|
396
|
+
symbol="f_3",
|
|
397
|
+
func=f_3_func,
|
|
398
|
+
maximize=True,
|
|
399
|
+
ideal=math.ceil(ideals["f_3"]),
|
|
400
|
+
nadir=math.floor(nadirs["f_3"]),
|
|
401
|
+
objective_type=ObjectiveTypeEnum.analytical,
|
|
402
|
+
is_linear=True,
|
|
403
|
+
is_convex=False, # not checked
|
|
404
|
+
is_twice_differentiable=True,
|
|
405
|
+
)
|
|
406
|
+
|
|
407
|
+
return Problem(
|
|
408
|
+
name=problem_name,
|
|
409
|
+
description="A test forest problem.",
|
|
410
|
+
constants=constants,
|
|
411
|
+
variables=variables,
|
|
412
|
+
objectives=[f_1, f_2, f_3],
|
|
413
|
+
constraints=constraints,
|
|
414
|
+
is_twice_differentiable=True,
|
|
415
|
+
), schedule_dict
|
|
@@ -0,0 +1,79 @@
|
|
|
1
|
+
"""This is a docstring."""
|
|
2
|
+
|
|
3
|
+
import json
|
|
4
|
+
|
|
5
|
+
from desdeo.api.db import SessionLocal
|
|
6
|
+
from desdeo.api.db_models import Method, SolutionArchive, User, Utopia
|
|
7
|
+
from desdeo.api.db_models import Problem as ProblemInDB
|
|
8
|
+
from desdeo.api.schema import Methods
|
|
9
|
+
from desdeo.utopia_stuff.utopia_problem import utopia_problem
|
|
10
|
+
|
|
11
|
+
|
|
12
|
+
def get_chosen_solution(username: str):
|
|
13
|
+
"""Recreates the forest problem for the specified user.
|
|
14
|
+
|
|
15
|
+
Args:
|
|
16
|
+
username (str): username of the forest owner
|
|
17
|
+
"""
|
|
18
|
+
db = SessionLocal()
|
|
19
|
+
user = db.query(User).filter(User.username == username).first()
|
|
20
|
+
if user is None:
|
|
21
|
+
raise Exception("User not found") # noqa: TRY002
|
|
22
|
+
problem_in_db = (
|
|
23
|
+
db.query(ProblemInDB).filter(ProblemInDB.owner == user.id, ProblemInDB.name == "Metsänhoitosuunnitelma").first()
|
|
24
|
+
)
|
|
25
|
+
# map_info = db.query(Utopia).filter(Utopia.problem == problem_in_db.id, Utopia.user == user.id)
|
|
26
|
+
|
|
27
|
+
nimbus_method = db.query(Method).filter(Method.kind == Methods.NIMBUS).first()
|
|
28
|
+
|
|
29
|
+
solution = (
|
|
30
|
+
db.query(SolutionArchive)
|
|
31
|
+
.filter(
|
|
32
|
+
SolutionArchive.user == user.id,
|
|
33
|
+
SolutionArchive.problem == problem_in_db.id,
|
|
34
|
+
SolutionArchive.method == nimbus_method.id,
|
|
35
|
+
)
|
|
36
|
+
.first()
|
|
37
|
+
)
|
|
38
|
+
|
|
39
|
+
if not solution:
|
|
40
|
+
return (None, None)
|
|
41
|
+
|
|
42
|
+
return (solution.objectives, solution.decision_variables)
|
|
43
|
+
|
|
44
|
+
|
|
45
|
+
""" with open("C:/MyTemp/data/forest_owners.json") as file: # noqa: PTH123
|
|
46
|
+
fo_dict = json.load(file)
|
|
47
|
+
|
|
48
|
+
print(fo_dict[username])
|
|
49
|
+
|
|
50
|
+
problem, schedule_dict = utopia_problem(
|
|
51
|
+
simulation_results=fo_dict[username]["simulation_results"],
|
|
52
|
+
treatment_key=fo_dict[username]["treatment_key"],
|
|
53
|
+
problem_name="Metsänhoitosuunnitelma",
|
|
54
|
+
)
|
|
55
|
+
|
|
56
|
+
problem_in_db.value = problem.model_dump(mode="json")
|
|
57
|
+
map_info.schedule_dict = schedule_dict
|
|
58
|
+
|
|
59
|
+
db.commit()"""
|
|
60
|
+
|
|
61
|
+
|
|
62
|
+
if __name__ == "__main__":
|
|
63
|
+
# print(get_chosen_solution("Iisakkila"))
|
|
64
|
+
with open("C:/MyTemp/data/forest_owners.json") as file: # noqa: PTH123
|
|
65
|
+
fo_dict = json.load(file)
|
|
66
|
+
|
|
67
|
+
reference_dict = {}
|
|
68
|
+
for fo in fo_dict:
|
|
69
|
+
objectives, decision_vars = get_chosen_solution(fo)
|
|
70
|
+
if objectives is None:
|
|
71
|
+
continue
|
|
72
|
+
reference_dict[fo] = {
|
|
73
|
+
"objectives": objectives,
|
|
74
|
+
"decisions_vars": decision_vars,
|
|
75
|
+
"simulation_results": fo_dict[fo]["simulation_results"],
|
|
76
|
+
}
|
|
77
|
+
|
|
78
|
+
with open("reference_solutions.json", "w") as file:
|
|
79
|
+
json.dump(reference_dict, file, indent=4) # indent=4 makes it nicely formatted
|
|
@@ -0,0 +1,21 @@
|
|
|
1
|
+
MIT License
|
|
2
|
+
|
|
3
|
+
Copyright (c) 2023 The Multiobjective Optimization Group (http://www.mit.jyu.fi/optgroup/).
|
|
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Metadata-Version: 2.3
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Name: desdeo
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Version: 2.0.0
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Summary: DESDEO is a modular and open source framework for interactive multiobjective optimization.
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License: MIT
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Author: Giovanni Misitano
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Author-email: giovanni.a.misitano@jyu.fi
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Requires-Python: >=3.12,<3.13
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Classifier: License :: OSI Approved :: MIT License
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Classifier: Programming Language :: Python :: 3
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Classifier: Programming Language :: Python :: 3.12
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Description-Content-Type: text/markdown
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# DESDEO: the open-source software framework for interactive multiobjective optimization
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[](https://desdeo.readthedocs.io/en/latest/) 
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[](https://discord.gg/TgSnUmzv5M)
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## Introduction
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DESDEO is an open-source framework for interactive multiobjective optimization
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methods. The framework contains implementations of both scalarization- and
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population-based interactive methods. There are currently no other open-source
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software frameworks that focus solely on the implementation of interactive
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multiobjective optimization methods.
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The mission of DESDEO is to increase awareness of the benefits of interactive
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multiobjective optimization methods, make interactive methods openly available,
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and to function as _the_ central hub for implementations of various interactive
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methods. Apart from existing methods, DESDEO offers various tools to facilitate
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the development of new methods and their application as well. Another important
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goal of DESDEO is to answer the needs of decision makers and practitioners when
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it comes to modeling and solving real-life multiobjective optimization problems.
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In the bigger picture, DESDEO will be composed of three major components:
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1. The __core-logic__, which contains the algorithmic implementation of
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interactive methods, various tools related to multiobjective optimization, and
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means to model a variety of multiobjective optimization problems. The core-logic
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can be considered stable enough for use in research and applications.
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2. The __web-API__ (WIP), which implements a web-based application programming
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interface (API) to allow the use of the various functionalities found in
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DESDEO's core-logic through a web connection. The web-API implements also a
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database, which is a vital component for managing and enabling
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decision-support using the framework. __The
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web-API is currently under heavy development, and is subject to changes.__
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3. The __web-GUI__ (WIP), which implements a web-based interface for utilizing
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the interactive methods and tools for modeling and solving multiobjective
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optimization problems. __The web-GUI relies heavily on the web-API, and is also being actively developed currently, and therefore subject to sudden changes.__
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For developing and experimenting with interactive multiobjective optimization
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methods on a "grass root" level, the __core-logic__ provides the necessary
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tools. For deploying interactive methods, the __web-API__ and the __web_GUI__
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play a central role.
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DESDEO is an open-source project and everybody is welcome to contribute!
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## Core-logic: key features
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DESDEO's core-logic offers various features that can facilitate the application and
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development of new interactive multiobjective optimization methods. Some
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of the key features include, but are not limited to,
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- A powerful, pydantic-based, schema for modeling multiobjective optimization
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problem of various kinds. Including, analytically defined problems, data-based
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problems, surrogate-based problems, and simulation-based problems.
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Both continuous and (mixed-)integer problems are supported as well.
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- Support to interface to many popular and powerful optimization software for
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solving multiobjective optimization problems. Including Gurobi, various solvers
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from the COIN-OR project, and nevergrad, for instance.
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- A wide assortment of modular software components for implementing existing
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and new interactive multiobjective optimization methods. For example, many
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scalarization functions and evolutionary operators for multiobjective
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optimization are available.
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- An extensive documentation suitable for both newcomers to DESDEO and
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interactive multiobjective optimization in general, and seasoned veterans.
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## Web-API: key features
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DESDEO's web-API is currently under active development. Once it stabilized, its
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key features will be listed here. In the meantime, the interested user can
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follow (and contribute!) the development progress of the web-API in [this
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issue](https://github.com/industrial-optimization-group/DESDEO/issues/245).
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## Web-GUI: key features
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DESDEO's web-GUI is currently in a planning stage. Once its active development
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starts, an issue will be created for documenting its development, as is
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currently the case with the web-API.
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## Installation instructions
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For installing DESDEO, please see the documentation (TODO) for instructions.
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## Documentation
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Care has been taken to make sure DESDEO is well documented, making it accessible
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to both newcomers and seasoned users alike. [The documentation of DESDEO is
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available online.](https://desdeo.readthedocs.io/en/desdeo2/)
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## Contributing
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As DESDEO is an open source-project, anybody is welcome to contribute.
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An extensive tutorial to get started contributing to DESDEO
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[is available in the documentation](https://desdeo.readthedocs.io/en/desdeo2/tutorials/contributing/).
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Be sure to check it out!
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For additional support for contributing to DESDEO,
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be sure to check out the DESDEO channels
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in the MCDM Community's Discord server. You may join the server
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[through this invite](https://discord.gg/TgSnUmzv5M).
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## License
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DESDEO is licensed under the MIT license. For more information,
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check the `LICENSE` file.
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## Citing DESDEO
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To cite DESDEO, please include the following reference:
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[Misitano, G., Saini, B. S., Afsar, B., Shavazipour, B., & Miettinen, K. (2021). DESDEO: The modular and open source framework for interactive multiobjective optimization. IEEE Access, 9, 148277-148295.](https://doi.org/10.1109/ACCESS.2021.3123825)
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```
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@article{misitano2021desdeo,
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title={DESDEO: The modular and open source framework for interactive multiobjective optimization},
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author={Misitano, Giovanni and Saini, Bhupinder Singh and Afsar, Bekir and Shavazipour, Babooshka and Miettinen, Kaisa},
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journal={IEEE Access},
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volume={9},
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pages={148277--148295},
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year={2021},
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publisher={IEEE}
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}
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```
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__Note__: A new article describing the latest iteration of the framework,
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also known as _DESDEO 2.0_ is currently being prepared. The content of
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this repository's master branch is considered to be _DESDEO 2.0_.
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## Funding
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Currently, DESDEO's development is partly funded by two projects granted by the
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[Research Council of Finland](https://www.aka.fi/en/). The most recent ones
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include:
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- DESIDES (project 355346)
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- UTOPIA (project 352784)
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- DAEMON (project 322221)
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