agent-os-kernel 1.1.0__py3-none-any.whl → 1.2.0__py3-none-any.whl

modules/scak/paper/arxiv_submission/bibliography.bib

@@ -0,0 +1,284 @@
+% Self-Correcting Agent Kernel - Bibliography
+% Generated: 2026-01-18
+% For use in academic paper submission
+
+% ===== Core Inspirations =====
+
+@inproceedings{shinn2023reflexion,
+  title={Reflexion: Language Agents with Verbal Reinforcement Learning},
+  author={Shinn, Noah and Cassano, Federico and Berman, Edward and Gopinath, Ashwin and Narasimhan, Karthik and Yao, Shunyu},
+  booktitle={Advances in Neural Information Processing Systems (NeurIPS)},
+  year={2023},
+  url={https://arxiv.org/abs/2303.11366}
+}
+
+@article{madaan2023self,
+  title={Self-Refine: Iterative Refinement with Self-Feedback},
+  author={Madaan, Aman and Tandon, Niket and Gupta, Prakhar and others},
+  journal={Advances in Neural Information Processing Systems (NeurIPS)},
+  year={2023},
+  url={https://arxiv.org/abs/2303.17651}
+}
+
+@article{wang2023voyager,
+  title={Voyager: An Open-Ended Embodied Agent with Large Language Models},
+  author={Wang, Guanzhi and Xie, Yuqi and Jiang, Yunfan and others},
+  year={2023},
+  url={https://arxiv.org/abs/2305.16291}
+}
+
+@article{bai2022constitutional,
+  title={Constitutional AI: Harmlessness from AI Feedback},
+  author={Bai, Yuntao and Kadavath, Saurav and Kundu, Sandipan and others},
+  journal={arXiv preprint arXiv:2212.08073},
+  year={2022},
+  publisher={Anthropic}
+}
+
+% ===== Reinforcement Learning from Human Feedback =====
+
+@inproceedings{christiano2017deep,
+  title={Deep Reinforcement Learning from Human Feedback},
+  author={Christiano, Paul F and Leike, Jan and Brown, Tom and others},
+  booktitle={Advances in Neural Information Processing Systems (NeurIPS)},
+  year={2017},
+  url={https://arxiv.org/abs/1706.03741}
+}
+
+@article{ouyang2022training,
+  title={Training language models to follow instructions with human feedback},
+  author={Ouyang, Long and Wu, Jeffrey and Jiang, Xu and others},
+  journal={arXiv preprint arXiv:2203.02155},
+  year={2022},
+  publisher={OpenAI}
+}
+
+@article{stiennon2020learning,
+  title={Learning to summarize with human feedback},
+  author={Stiennon, Nisan and Ouyang, Long and Wu, Jeffrey and others},
+  booktitle={Advances in Neural Information Processing Systems (NeurIPS)},
+  year={2020},
+  url={https://arxiv.org/abs/2009.01325}
+}
+
+% ===== Multi-Agent Systems =====
+
+@article{wu2023autogen,
+  title={AutoGen: Enabling Next-Gen LLM Applications via Multi-Agent Conversation},
+  author={Wu, Qingyun and Bansal, Gagan and Zhang, Jieyu and others},
+  journal={arXiv preprint arXiv:2308.08155},
+  year={2023},
+  publisher={Microsoft Research}
+}
+
+@article{park2023generative,
+  title={Generative Agents: Interactive Simulacra of Human Behavior},
+  author={Park, Joon Sung and O'Brien, Joseph C and Cai, Carrie J and others},
+  year={2023},
+  url={https://arxiv.org/abs/2304.03442}
+}
+
+@article{hong2023metagpt,
+  title={MetaGPT: Meta Programming for A Multi-Agent Collaborative Framework},
+  author={Hong, Sirui and Zhuge, Mingchen and Chen, Jiaqi and Zheng, Xiawu and Cheng, Yuheng and Zhang, Ceyao and others},
+  year={2023},
+  url={https://arxiv.org/abs/2308.00352}
+}
+
+% ===== Tool Use and Grounding =====
+
+@article{schick2023toolformer,
+  title={Toolformer: Language Models Can Teach Themselves to Use Tools},
+  author={Schick, Timo and Dwivedi-Yu, Jane and Dessi, Roberto and others},
+  year={2023},
+  url={https://arxiv.org/abs/2302.04761}
+}
+
+@inproceedings{yao2023react,
+  title={ReAct: Synergizing Reasoning and Acting in Language Models},
+  author={Yao, Shunyu and Zhao, Jeffrey and Yu, Dian and others},
+  booktitle={International Conference on Learning Representations (ICLR)},
+  year={2023},
+  url={https://arxiv.org/abs/2210.03629}
+}
+
+@article{qin2023toolllm,
+  title={ToolLLM: Facilitating Large Language Models to Master 16000+ Real-world APIs},
+  author={Qin, Yujia and Liang, Shihao and Ye, Yining and others},
+  year={2023},
+  url={https://arxiv.org/abs/2307.16789}
+}
+
+% ===== Context Management =====
+
+@article{liu2023lost,
+  title={Lost in the Middle: How Language Models Use Long Contexts},
+  author={Liu, Nelson F and Lin, Kevin and Hewitt, John and others},
+  year={2023},
+  url={https://arxiv.org/abs/2307.03172}
+}
+
+@article{mohtashami2023landmark,
+  title={Landmark Attention: Random-Access Infinite Context Length for Transformers},
+  author={Mohtashami, Amirkeivan and Jaggi, Martin},
+  year={2023},
+  url={https://arxiv.org/abs/2305.16300}
+}
+
+@inproceedings{lewis2020retrieval,
+  title={Retrieval-Augmented Generation for Knowledge-Intensive NLP Tasks},
+  author={Lewis, Patrick and Perez, Ethan and Piktus, Aleksandra and others},
+  booktitle={Advances in Neural Information Processing Systems (NeurIPS)},
+  year={2020},
+  url={https://arxiv.org/abs/2005.11401}
+}
+
+% ===== Safety and Alignment (2024-2025) =====
+
+@misc{meta2024llamaguard2,
+  title={LlamaGuard 2: Safety Classification for LLM Interactions},
+  author={{Meta AI}},
+  year={2024},
+  howpublished={Meta Research Blog},
+  note={Technical report on improved safety classification}
+}
+
+@article{han2024wildguard,
+  title={WildGuard: Open One-Stop Moderation Tools for Safety Risks, Jailbreaks, and Refusals of LLMs},
+  author={Han, Seungju and Rao, Kavel and Ettinger, Allyson and Jiang, Liwei and Lin, Bill Yuchen and Lambert, Nathan and Choi, Yejin and Dziri, Nouha},
+  journal={Advances in Neural Information Processing Systems (NeurIPS)},
+  year={2024},
+  url={https://arxiv.org/abs/2406.18495}
+}
+
+@article{zou2023universal,
+  title={Universal and Transferable Adversarial Attacks on Aligned Language Models},
+  author={Zou, Andy and Wang, Zifan and Carlini, Nicholas and Nasr, Milad and Kolter, J. Zico and Fredrikson, Matt},
+  year={2023},
+  url={https://arxiv.org/abs/2307.15043}
+}
+
+% ===== Benchmarks =====
+
+@article{mialon2023gaia,
+  title={GAIA: a benchmark for General AI Assistants},
+  author={Mialon, Gr{\'e}goire and Fourrier, Cl{\'e}mentine and Swift, Craig and Wolf, Thomas and LeCun, Yann and Scialom, Thomas},
+  year={2023},
+  url={https://arxiv.org/abs/2311.12983}
+}
+
+@article{liu2023agentbench,
+  title={AgentBench: Evaluating LLMs as Agents},
+  author={Liu, Xiao and Yu, Hao and Zhang, Hanchen and others},
+  year={2023},
+  url={https://arxiv.org/abs/2308.03688}
+}
+
+% ===== Production ML =====
+
+@inproceedings{sculley2015hidden,
+  title={Hidden Technical Debt in Machine Learning Systems},
+  author={Sculley, David and Holt, Gary and Golovin, Daniel and others},
+  booktitle={Advances in Neural Information Processing Systems (NeurIPS)},
+  year={2015}
+}
+
+@inproceedings{breck2019data,
+  title={Data Validation for Machine Learning},
+  author={Breck, Eric and Polyzotis, Neoklis and Roy, Sudip and others},
+  booktitle={MLSys},
+  year={2019}
+}
+
+% ===== Cognitive Science Foundations =====
+
+@book{kahneman2011thinking,
+  title={Thinking, Fast and Slow},
+  author={Kahneman, Daniel},
+  year={2011},
+  publisher={Farrar, Straus and Giroux}
+}
+
+@book{boyd1987discourse,
+  title={A Discourse on Winning and Losing},
+  author={Boyd, John R},
+  year={1987},
+  publisher={Air University Press}
+}
+
+% ===== Governance and Policy (2025) =====
+
+@misc{wef2025governance,
+  title={AI Agents in the Workplace: Governance Framework and Risk Mitigation},
+  author={{World Economic Forum}},
+  year={2025},
+  howpublished={WEF Whitepaper},
+  month={January}
+}
+
+@misc{euai2024,
+  title={Regulation (EU) 2024/1689 - Artificial Intelligence Act},
+  author={{European Parliament}},
+  year={2024},
+  howpublished={Official Journal of the European Union}
+}
+
+% ===== LLM Models Referenced =====
+
+@misc{openai2023gpt4,
+  title={GPT-4 Technical Report},
+  author={{OpenAI}},
+  year={2023},
+  url={https://arxiv.org/abs/2303.08774}
+}
+
+@misc{openai2024o1,
+  title={Learning to Reason with LLMs},
+  author={{OpenAI}},
+  year={2024},
+  howpublished={OpenAI Blog},
+  month={September}
+}
+
+@misc{anthropic2024claude,
+  title={Claude 3.5 Sonnet: Extended Context and Reasoning},
+  author={{Anthropic}},
+  year={2024},
+  howpublished={Anthropic Release Notes},
+  month={June}
+}
+
+% ===== Additional References =====
+
+@article{chen2023teaching,
+  title={Teaching Large Language Models to Self-Debug},
+  author={Chen, Xinyun and Lin, Maxwell and Sch{\"a}rli, Nathanael and Zhou, Denny},
+  year={2023},
+  url={https://arxiv.org/abs/2304.05128}
+}
+
+@article{zhang2023multimodal,
+  title={Multimodal Chain-of-Thought Reasoning in Language Models},
+  author={Zhang, Zhuosheng and Zhang, Aston and Li, Mu and others},
+  year={2023},
+  url={https://arxiv.org/abs/2302.00923}
+}
+
+@misc{basiri2016chaos,
+  title={Chaos Engineering},
+  author={Basiri, Ali and Behnam, Niosha and de Rooij, Ruud and others},
+  journal={IEEE Software},
+  year={2016},
+  publisher={IEEE}
+}
+
+% ===== Our Work =====
+
+@software{scak2026,
+  title={Self-Correcting Agent Kernel: Automated Alignment via Differential Auditing and Semantic Memory Hygiene},
+  author={{Self-Correcting Agent Team}},
+  year={2026},
+  version={1.1.0},
+  url={https://github.com/imran-siddique/self-correcting-agent-kernel},
+  note={Research foundations: Reflexion (NeurIPS 2023), Constitutional AI (Anthropic 2022), Voyager (arXiv:2305.16291)}
+}

modules/scak/paper/arxiv_submission/main.aux

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+\bibstyle{plainnat}
+\bibdata{bibliography}
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+\bibcite{basiri2016chaos}{{2}{2016}{{Basiri et~al.}}{{Basiri, Behnam, de~Rooij, et~al.}}}
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modules/scak/paper/arxiv_submission/main.bbl

@@ -0,0 +1,113 @@
+\begin{thebibliography}{16}
+\providecommand{\natexlab}[1]{#1}
+\providecommand{\url}[1]{\texttt{#1}}
+\expandafter\ifx\csname urlstyle\endcsname\relax
+  \providecommand{\doi}[1]{doi: #1}\else
+  \providecommand{\doi}{doi: \begingroup \urlstyle{rm}\Url}\fi
+
+\bibitem[Bai et~al.(2022)Bai, Kadavath, Kundu, et~al.]{bai2022constitutional}
+Yuntao Bai, Saurav Kadavath, Sandipan Kundu, et~al.
+\newblock Constitutional ai: Harmlessness from ai feedback.
+\newblock \emph{arXiv preprint arXiv:2212.08073}, 2022.
+
+\bibitem[Basiri et~al.(2016)Basiri, Behnam, de~Rooij, et~al.]{basiri2016chaos}
+Ali Basiri, Niosha Behnam, Ruud de~Rooij, et~al.
+\newblock Chaos engineering, 2016.
+
+\bibitem[Boyd(1987)]{boyd1987discourse}
+John~R Boyd.
+\newblock \emph{A Discourse on Winning and Losing}.
+\newblock Air University Press, 1987.
+
+\bibitem[{European Parliament}(2024)]{euai2024}
+{European Parliament}.
+\newblock Regulation (eu) 2024/1689 - artificial intelligence act.
+\newblock Official Journal of the European Union, 2024.
+
+\bibitem[Han et~al.(2024)Han, Rao, Ettinger, Jiang, Lin, Lambert, Choi, and
+  Dziri]{han2024wildguard}
+Seungju Han, Kavel Rao, Allyson Ettinger, Liwei Jiang, Bill~Yuchen Lin, Nathan
+  Lambert, Yejin Choi, and Nouha Dziri.
+\newblock Wildguard: Open one-stop moderation tools for safety risks,
+  jailbreaks, and refusals of llms.
+\newblock \emph{Advances in Neural Information Processing Systems (NeurIPS)},
+  2024.
+\newblock URL \url{https://arxiv.org/abs/2406.18495}.
+
+\bibitem[Hong et~al.(2023)Hong, Zhuge, Chen, Zheng, Cheng, Zhang,
+  et~al.]{hong2023metagpt}
+Sirui Hong, Mingchen Zhuge, Jiaqi Chen, Xiawu Zheng, Yuheng Cheng, Ceyao Zhang,
+  et~al.
+\newblock Metagpt: Meta programming for a multi-agent collaborative framework.
+\newblock 2023.
+\newblock URL \url{https://arxiv.org/abs/2308.00352}.
+
+\bibitem[Lewis et~al.(2020)Lewis, Perez, Piktus, et~al.]{lewis2020retrieval}
+Patrick Lewis, Ethan Perez, Aleksandra Piktus, et~al.
+\newblock Retrieval-augmented generation for knowledge-intensive nlp tasks.
+\newblock In \emph{Advances in Neural Information Processing Systems
+  (NeurIPS)}, 2020.
+\newblock URL \url{https://arxiv.org/abs/2005.11401}.
+
+\bibitem[Liu et~al.(2023)Liu, Lin, Hewitt, et~al.]{liu2023lost}
+Nelson~F Liu, Kevin Lin, John Hewitt, et~al.
+\newblock Lost in the middle: How language models use long contexts.
+\newblock 2023.
+\newblock URL \url{https://arxiv.org/abs/2307.03172}.
+
+\bibitem[Madaan et~al.(2023)Madaan, Tandon, Gupta, et~al.]{madaan2023self}
+Aman Madaan, Niket Tandon, Prakhar Gupta, et~al.
+\newblock Self-refine: Iterative refinement with self-feedback.
+\newblock \emph{Advances in Neural Information Processing Systems (NeurIPS)},
+  2023.
+\newblock URL \url{https://arxiv.org/abs/2303.17651}.
+
+\bibitem[{Meta AI}(2024)]{meta2024llamaguard2}
+{Meta AI}.
+\newblock Llamaguard 2: Safety classification for llm interactions.
+\newblock Meta Research Blog, 2024.
+\newblock Technical report on improved safety classification.
+
+\bibitem[Mohtashami and Jaggi(2023)]{mohtashami2023landmark}
+Amirkeivan Mohtashami and Martin Jaggi.
+\newblock Landmark attention: Random-access infinite context length for
+  transformers.
+\newblock 2023.
+\newblock URL \url{https://arxiv.org/abs/2305.16300}.
+
+\bibitem[{Self-Correcting Agent Team}(2026)]{scak2026}
+{Self-Correcting Agent Team}.
+\newblock Self-correcting agent kernel: Automated alignment via differential
+  auditing and semantic memory hygiene, 2026.
+\newblock URL
+  \url{https://github.com/imran-siddique/self-correcting-agent-kernel}.
+\newblock Research foundations: Reflexion (NeurIPS 2023), Constitutional AI
+  (Anthropic 2022), Voyager (arXiv:2305.16291).
+
+\bibitem[Shinn et~al.(2023)Shinn, Cassano, Berman, Gopinath, Narasimhan, and
+  Yao]{shinn2023reflexion}
+Noah Shinn, Federico Cassano, Edward Berman, Ashwin Gopinath, Karthik
+  Narasimhan, and Shunyu Yao.
+\newblock Reflexion: Language agents with verbal reinforcement learning.
+\newblock In \emph{Advances in Neural Information Processing Systems
+  (NeurIPS)}, 2023.
+\newblock URL \url{https://arxiv.org/abs/2303.11366}.
+
+\bibitem[Wang et~al.(2023)Wang, Xie, Jiang, et~al.]{wang2023voyager}
+Guanzhi Wang, Yuqi Xie, Yunfan Jiang, et~al.
+\newblock Voyager: An open-ended embodied agent with large language models.
+\newblock 2023.
+\newblock URL \url{https://arxiv.org/abs/2305.16291}.
+
+\bibitem[{World Economic Forum}(2025)]{wef2025governance}
+{World Economic Forum}.
+\newblock Ai agents in the workplace: Governance framework and risk mitigation.
+\newblock WEF Whitepaper, January 2025.
+
+\bibitem[Wu et~al.(2023)Wu, Bansal, Zhang, et~al.]{wu2023autogen}
+Qingyun Wu, Gagan Bansal, Jieyu Zhang, et~al.
+\newblock Autogen: Enabling next-gen llm applications via multi-agent
+  conversation.
+\newblock \emph{arXiv preprint arXiv:2308.08155}, 2023.
+
+\end{thebibliography}

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