research-copilot 0.1.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/LICENSE +21 -0
- package/README.md +190 -0
- package/app/build/icon.icns +0 -0
- package/app/build/icon.ico +0 -0
- package/app/build/icon.png +0 -0
- package/app/out/main/index.mjs +6719 -0
- package/app/out/preload/index.js +141 -0
- package/app/out/renderer/assets/Inter-Variable-Latin-8kRkwJBP.woff2 +0 -0
- package/app/out/renderer/assets/Inter-Variable-LatinExt-B_-bZUTo.woff2 +0 -0
- package/app/out/renderer/assets/KaTeX_AMS-Regular-BQhdFMY1.woff2 +0 -0
- package/app/out/renderer/assets/KaTeX_AMS-Regular-DMm9YOAa.woff +0 -0
- package/app/out/renderer/assets/KaTeX_AMS-Regular-DRggAlZN.ttf +0 -0
- package/app/out/renderer/assets/KaTeX_Caligraphic-Bold-ATXxdsX0.ttf +0 -0
- package/app/out/renderer/assets/KaTeX_Caligraphic-Bold-BEiXGLvX.woff +0 -0
- package/app/out/renderer/assets/KaTeX_Caligraphic-Bold-Dq_IR9rO.woff2 +0 -0
- package/app/out/renderer/assets/KaTeX_Caligraphic-Regular-CTRA-rTL.woff +0 -0
- package/app/out/renderer/assets/KaTeX_Caligraphic-Regular-Di6jR-x-.woff2 +0 -0
- package/app/out/renderer/assets/KaTeX_Caligraphic-Regular-wX97UBjC.ttf +0 -0
- package/app/out/renderer/assets/KaTeX_Fraktur-Bold-BdnERNNW.ttf +0 -0
- package/app/out/renderer/assets/KaTeX_Fraktur-Bold-BsDP51OF.woff +0 -0
- package/app/out/renderer/assets/KaTeX_Fraktur-Bold-CL6g_b3V.woff2 +0 -0
- package/app/out/renderer/assets/KaTeX_Fraktur-Regular-CB_wures.ttf +0 -0
- package/app/out/renderer/assets/KaTeX_Fraktur-Regular-CTYiF6lA.woff2 +0 -0
- package/app/out/renderer/assets/KaTeX_Fraktur-Regular-Dxdc4cR9.woff +0 -0
- package/app/out/renderer/assets/KaTeX_Main-Bold-Cx986IdX.woff2 +0 -0
- package/app/out/renderer/assets/KaTeX_Main-Bold-Jm3AIy58.woff +0 -0
- package/app/out/renderer/assets/KaTeX_Main-Bold-waoOVXN0.ttf +0 -0
- package/app/out/renderer/assets/KaTeX_Main-BoldItalic-DxDJ3AOS.woff2 +0 -0
- package/app/out/renderer/assets/KaTeX_Main-BoldItalic-DzxPMmG6.ttf +0 -0
- package/app/out/renderer/assets/KaTeX_Main-BoldItalic-SpSLRI95.woff +0 -0
- package/app/out/renderer/assets/KaTeX_Main-Italic-3WenGoN9.ttf +0 -0
- package/app/out/renderer/assets/KaTeX_Main-Italic-BMLOBm91.woff +0 -0
- package/app/out/renderer/assets/KaTeX_Main-Italic-NWA7e6Wa.woff2 +0 -0
- package/app/out/renderer/assets/KaTeX_Main-Regular-B22Nviop.woff2 +0 -0
- package/app/out/renderer/assets/KaTeX_Main-Regular-Dr94JaBh.woff +0 -0
- package/app/out/renderer/assets/KaTeX_Main-Regular-ypZvNtVU.ttf +0 -0
- package/app/out/renderer/assets/KaTeX_Math-BoldItalic-B3XSjfu4.ttf +0 -0
- package/app/out/renderer/assets/KaTeX_Math-BoldItalic-CZnvNsCZ.woff2 +0 -0
- package/app/out/renderer/assets/KaTeX_Math-BoldItalic-iY-2wyZ7.woff +0 -0
- package/app/out/renderer/assets/KaTeX_Math-Italic-DA0__PXp.woff +0 -0
- package/app/out/renderer/assets/KaTeX_Math-Italic-flOr_0UB.ttf +0 -0
- package/app/out/renderer/assets/KaTeX_Math-Italic-t53AETM-.woff2 +0 -0
- package/app/out/renderer/assets/KaTeX_SansSerif-Bold-CFMepnvq.ttf +0 -0
- package/app/out/renderer/assets/KaTeX_SansSerif-Bold-D1sUS0GD.woff2 +0 -0
- package/app/out/renderer/assets/KaTeX_SansSerif-Bold-DbIhKOiC.woff +0 -0
- package/app/out/renderer/assets/KaTeX_SansSerif-Italic-C3H0VqGB.woff2 +0 -0
- package/app/out/renderer/assets/KaTeX_SansSerif-Italic-DN2j7dab.woff +0 -0
- package/app/out/renderer/assets/KaTeX_SansSerif-Italic-YYjJ1zSn.ttf +0 -0
- package/app/out/renderer/assets/KaTeX_SansSerif-Regular-BNo7hRIc.ttf +0 -0
- package/app/out/renderer/assets/KaTeX_SansSerif-Regular-CS6fqUqJ.woff +0 -0
- package/app/out/renderer/assets/KaTeX_SansSerif-Regular-DDBCnlJ7.woff2 +0 -0
- package/app/out/renderer/assets/KaTeX_Script-Regular-C5JkGWo-.ttf +0 -0
- package/app/out/renderer/assets/KaTeX_Script-Regular-D3wIWfF6.woff2 +0 -0
- package/app/out/renderer/assets/KaTeX_Script-Regular-D5yQViql.woff +0 -0
- package/app/out/renderer/assets/KaTeX_Size1-Regular-C195tn64.woff +0 -0
- package/app/out/renderer/assets/KaTeX_Size1-Regular-Dbsnue_I.ttf +0 -0
- package/app/out/renderer/assets/KaTeX_Size1-Regular-mCD8mA8B.woff2 +0 -0
- package/app/out/renderer/assets/KaTeX_Size2-Regular-B7gKUWhC.ttf +0 -0
- package/app/out/renderer/assets/KaTeX_Size2-Regular-Dy4dx90m.woff2 +0 -0
- package/app/out/renderer/assets/KaTeX_Size2-Regular-oD1tc_U0.woff +0 -0
- package/app/out/renderer/assets/KaTeX_Size3-Regular-CTq5MqoE.woff +0 -0
- package/app/out/renderer/assets/KaTeX_Size3-Regular-DgpXs0kz.ttf +0 -0
- package/app/out/renderer/assets/KaTeX_Size4-Regular-BF-4gkZK.woff +0 -0
- package/app/out/renderer/assets/KaTeX_Size4-Regular-DWFBv043.ttf +0 -0
- package/app/out/renderer/assets/KaTeX_Size4-Regular-Dl5lxZxV.woff2 +0 -0
- package/app/out/renderer/assets/KaTeX_Typewriter-Regular-C0xS9mPB.woff +0 -0
- package/app/out/renderer/assets/KaTeX_Typewriter-Regular-CO6r4hn1.woff2 +0 -0
- package/app/out/renderer/assets/KaTeX_Typewriter-Regular-D3Ib7_Hf.ttf +0 -0
- package/app/out/renderer/assets/MilkdownMarkdownEditor-bLPxrCVb.js +89821 -0
- package/app/out/renderer/assets/MilkdownMarkdownEditor-tTNRIB2K.css +2555 -0
- package/app/out/renderer/assets/Tableau10-BqnYsPR6.js +9 -0
- package/app/out/renderer/assets/apl-fqmucPXA.js +140 -0
- package/app/out/renderer/assets/arc-J47ePHZ2.js +132 -0
- package/app/out/renderer/assets/array-DgktLKBx.js +6 -0
- package/app/out/renderer/assets/asciiarmor-DucZyvP0.js +56 -0
- package/app/out/renderer/assets/asn1-BnOEsgAm.js +144 -0
- package/app/out/renderer/assets/asterisk-QAlztEwS.js +345 -0
- package/app/out/renderer/assets/blockDiagram-c4efeb88-5uRQXgQJ.js +1817 -0
- package/app/out/renderer/assets/brainfuck-DZVCuF_t.js +53 -0
- package/app/out/renderer/assets/c4Diagram-c83219d4-C4iCTPEL.js +2464 -0
- package/app/out/renderer/assets/channel-ZAmhHE3g.js +7 -0
- package/app/out/renderer/assets/classDiagram-beda092f-7NOZxq_W.js +357 -0
- package/app/out/renderer/assets/classDiagram-v2-2358418a-5fPT-cUH.js +291 -0
- package/app/out/renderer/assets/clike-xqXYL6ge.js +805 -0
- package/app/out/renderer/assets/clojure-BhXMqnxz.js +849 -0
- package/app/out/renderer/assets/clone-CsnzsYXQ.js +8 -0
- package/app/out/renderer/assets/cmake-BGaNd9E7.js +71 -0
- package/app/out/renderer/assets/cobol-4yqQntpt.js +120 -0
- package/app/out/renderer/assets/coffeescript-D2dXvhEc.js +308 -0
- package/app/out/renderer/assets/commonlisp-CF_VNHQR.js +130 -0
- package/app/out/renderer/assets/createText-1719965b-Cji7KN4K.js +4904 -0
- package/app/out/renderer/assets/crystal-DyuLTqLs.js +398 -0
- package/app/out/renderer/assets/css-c-jst79C.js +1783 -0
- package/app/out/renderer/assets/cypher-Dlu_3r4V.js +121 -0
- package/app/out/renderer/assets/d-UURgV0Ux.js +179 -0
- package/app/out/renderer/assets/diff-B_Bi2Crb.js +25 -0
- package/app/out/renderer/assets/dockerfile-Bvk733Ga.js +201 -0
- package/app/out/renderer/assets/dtd-Dy74G54E.js +114 -0
- package/app/out/renderer/assets/dylan-TSb-Nfix.js +314 -0
- package/app/out/renderer/assets/ebnf-DAomQUbD.js +139 -0
- package/app/out/renderer/assets/ecl-B59qGGVg.js +178 -0
- package/app/out/renderer/assets/edges-96097737-CD0EvAZQ.js +1844 -0
- package/app/out/renderer/assets/eiffel-Dze7nlu3.js +134 -0
- package/app/out/renderer/assets/elm-DG7jkhNZ.js +176 -0
- package/app/out/renderer/assets/erDiagram-0228fc6a-DRYXBpi7.js +1321 -0
- package/app/out/renderer/assets/erlang-BO6gOnGA.js +674 -0
- package/app/out/renderer/assets/factor-CMxFHDqz.js +65 -0
- package/app/out/renderer/assets/fcl-CDDUNjTj.js +141 -0
- package/app/out/renderer/assets/flowDb-c6c81e3f-CuoIN-Cy.js +1713 -0
- package/app/out/renderer/assets/flowDiagram-50d868cf-CPWPLOml.js +1272 -0
- package/app/out/renderer/assets/flowDiagram-v2-4f6560a1-C_R12s4S.js +33 -0
- package/app/out/renderer/assets/flowchart-elk-definition-6af322e1-BdKUSFpi.js +92921 -0
- package/app/out/renderer/assets/forth-B9D2JCeE.js +116 -0
- package/app/out/renderer/assets/fortran-CAG2BFbe.js +467 -0
- package/app/out/renderer/assets/ganttDiagram-a2739b55-ygqT5HlG.js +3399 -0
- package/app/out/renderer/assets/gas-d3KEcW3x.js +294 -0
- package/app/out/renderer/assets/gherkin-DhZlEZiy.js +115 -0
- package/app/out/renderer/assets/gitGraphDiagram-82fe8481-D97GT4iA.js +1791 -0
- package/app/out/renderer/assets/graph-DpC13d95.js +1237 -0
- package/app/out/renderer/assets/groovy-CpwJiBl7.js +223 -0
- package/app/out/renderer/assets/haskell-BlGBCCe3.js +459 -0
- package/app/out/renderer/assets/haxe-7MlzfeYV.js +514 -0
- package/app/out/renderer/assets/http-BqypyemW.js +79 -0
- package/app/out/renderer/assets/idl-4HIGJlDI.js +985 -0
- package/app/out/renderer/assets/index-4-ziknCv.js +292 -0
- package/app/out/renderer/assets/index-5325376f-Bbs7Fbqr.js +663 -0
- package/app/out/renderer/assets/index-B2jip-rk.js +2489 -0
- package/app/out/renderer/assets/index-BKTVfokE.js +312 -0
- package/app/out/renderer/assets/index-BiJbFgVG.js +118 -0
- package/app/out/renderer/assets/index-Bn433Fat.js +83 -0
- package/app/out/renderer/assets/index-BqDyyRCx.js +39679 -0
- package/app/out/renderer/assets/index-BzFMeMPn.js +158 -0
- package/app/out/renderer/assets/index-C-_uCjZJ.css +2701 -0
- package/app/out/renderer/assets/index-C1ithNW1.js +1765 -0
- package/app/out/renderer/assets/index-CAJkRYkO.js +407 -0
- package/app/out/renderer/assets/index-CleO0-yj.js +690 -0
- package/app/out/renderer/assets/index-Cq4MH3sY.js +1020 -0
- package/app/out/renderer/assets/index-CtA0Xj22.js +705 -0
- package/app/out/renderer/assets/index-CvAZkqBZ.js +83 -0
- package/app/out/renderer/assets/index-D3UDN-5c.js +152 -0
- package/app/out/renderer/assets/index-D4F9R5ao.js +179 -0
- package/app/out/renderer/assets/index-D6RguhZ5.js +328 -0
- package/app/out/renderer/assets/index-DnEowqXv.js +386 -0
- package/app/out/renderer/assets/index-K8c8Mqdy.js +98 -0
- package/app/out/renderer/assets/index-Kh14gO6K.js +62 -0
- package/app/out/renderer/assets/index-WFd2jRnA.js +333 -0
- package/app/out/renderer/assets/index-WgMfkRFp.js +313 -0
- package/app/out/renderer/assets/index-Y4lKyF6t.js +1042 -0
- package/app/out/renderer/assets/index-fx307_f1.js +643 -0
- package/app/out/renderer/assets/infoDiagram-8eee0895-ptaVSwzq.js +511 -0
- package/app/out/renderer/assets/init-ZxktEp_H.js +16 -0
- package/app/out/renderer/assets/javascript-C3MnDRiU.js +994 -0
- package/app/out/renderer/assets/journeyDiagram-c64418c1-aloEGOQp.js +1184 -0
- package/app/out/renderer/assets/julia-Bs6JJhYG.js +407 -0
- package/app/out/renderer/assets/layout-ZeuHE_aY.js +2217 -0
- package/app/out/renderer/assets/line-CAgaGl-S.js +45 -0
- package/app/out/renderer/assets/linear-DIg7lTe1.js +539 -0
- package/app/out/renderer/assets/livescript-DmzgM3Yt.js +296 -0
- package/app/out/renderer/assets/lua-8cJgIlqe.js +256 -0
- package/app/out/renderer/assets/mathematica-DNLOL9PQ.js +110 -0
- package/app/out/renderer/assets/mbox-Ga7d4MMN.js +117 -0
- package/app/out/renderer/assets/mindmap-definition-8da855dc-B8XVoUxz.js +36054 -0
- package/app/out/renderer/assets/mirc-Dma3B8rS.js +107 -0
- package/app/out/renderer/assets/mllike-DHn7xckP.js +334 -0
- package/app/out/renderer/assets/modelica-0d55jYY0.js +147 -0
- package/app/out/renderer/assets/mscgen-DdqZYINH.js +135 -0
- package/app/out/renderer/assets/mumps-Btr8VblO.js +93 -0
- package/app/out/renderer/assets/nginx-DTDtBDVN.js +141 -0
- package/app/out/renderer/assets/nsis-3zG7tgur.js +62 -0
- package/app/out/renderer/assets/ntriples-CvgOYMpL.js +153 -0
- package/app/out/renderer/assets/octave-DYBj3-tl.js +200 -0
- package/app/out/renderer/assets/ordinal-DSZU4PqD.js +76 -0
- package/app/out/renderer/assets/oz-R_e8WMIi.js +231 -0
- package/app/out/renderer/assets/pascal-GD8iposT.js +105 -0
- package/app/out/renderer/assets/path-Cp2qmpkd.js +109 -0
- package/app/out/renderer/assets/perl-DL9mHpoi.js +1105 -0
- package/app/out/renderer/assets/pieDiagram-a8764435-DlwoeBU2.js +770 -0
- package/app/out/renderer/assets/pig-C_4T4YIV.js +101 -0
- package/app/out/renderer/assets/powershell-B0suO7Vd.js +328 -0
- package/app/out/renderer/assets/properties-BR-vP1aU.js +58 -0
- package/app/out/renderer/assets/protobuf-BxgpyhoW.js +77 -0
- package/app/out/renderer/assets/pug-By0kVCfm.js +405 -0
- package/app/out/renderer/assets/puppet-Bdao66PW.js +137 -0
- package/app/out/renderer/assets/python-CvWbmiX4.js +427 -0
- package/app/out/renderer/assets/q-CrbCVq4a.js +131 -0
- package/app/out/renderer/assets/quadrantDiagram-1e28029f-BaSi1XB4.js +1200 -0
- package/app/out/renderer/assets/r-V7nswm59.js +170 -0
- package/app/out/renderer/assets/requirementDiagram-08caed73-D3EFyegZ.js +1092 -0
- package/app/out/renderer/assets/rpm-C-DLY-If.js +109 -0
- package/app/out/renderer/assets/ruby-JDKLJNK0.js +330 -0
- package/app/out/renderer/assets/sankeyDiagram-a04cb91d-Cv44AsnM.js +1174 -0
- package/app/out/renderer/assets/sas-D2UG-yhZ.js +207 -0
- package/app/out/renderer/assets/scheme-BKzrkGJD.js +222 -0
- package/app/out/renderer/assets/sequenceDiagram-c5b8d532-CuUBu-x4.js +3337 -0
- package/app/out/renderer/assets/shell-BlsXDxCn.js +222 -0
- package/app/out/renderer/assets/sieve-CjwBwOY5.js +135 -0
- package/app/out/renderer/assets/simple-mode-DMneyfDu.js +130 -0
- package/app/out/renderer/assets/smalltalk-BOIGQuhN.js +121 -0
- package/app/out/renderer/assets/solr-CwD7U71z.js +69 -0
- package/app/out/renderer/assets/sparql-DYskk2vE.js +249 -0
- package/app/out/renderer/assets/spreadsheet-Bgtt3oLP.js +87 -0
- package/app/out/renderer/assets/sql-BSrOzCRI.js +354 -0
- package/app/out/renderer/assets/stateDiagram-1ecb1508-BOU34Zp4.js +454 -0
- package/app/out/renderer/assets/stateDiagram-v2-c2b004d7-BgRoffou.js +326 -0
- package/app/out/renderer/assets/stex-B6LNC55o.js +231 -0
- package/app/out/renderer/assets/styles-b4e223ce-BMr9TPuj.js +1483 -0
- package/app/out/renderer/assets/styles-ca3715f6-DgbNw99p.js +1363 -0
- package/app/out/renderer/assets/styles-d45a18b0-DtRYKYKf.js +574 -0
- package/app/out/renderer/assets/stylus-BkS-boTH.js +565 -0
- package/app/out/renderer/assets/svgDrawCommon-b86b1483-Bein03PD.js +100 -0
- package/app/out/renderer/assets/swift-FRZi1uvB.js +291 -0
- package/app/out/renderer/assets/tcl-CUcaCdmq.js +114 -0
- package/app/out/renderer/assets/textile-BnFpjsrl.js +414 -0
- package/app/out/renderer/assets/tiddlywiki-CjprD-Qp.js +218 -0
- package/app/out/renderer/assets/tiki-B4EPSQ1G.js +265 -0
- package/app/out/renderer/assets/timeline-definition-faaaa080-BlWpLE_4.js +1212 -0
- package/app/out/renderer/assets/toml-BOuWGMcf.js +76 -0
- package/app/out/renderer/assets/troff-E1bJ0PPL.js +61 -0
- package/app/out/renderer/assets/ttcn-cfg-Dc39-fIP.js +133 -0
- package/app/out/renderer/assets/ttcn-tKd4HLu4.js +192 -0
- package/app/out/renderer/assets/turtle-Dq7-1WAf.js +124 -0
- package/app/out/renderer/assets/vb-Dp90gtsv.js +196 -0
- package/app/out/renderer/assets/vbscript-CI6_mxxU.js +479 -0
- package/app/out/renderer/assets/velocity-BwIZK1TH.js +149 -0
- package/app/out/renderer/assets/verilog-DDCYnHN8.js +430 -0
- package/app/out/renderer/assets/vhdl-DCkMIyT9.js +158 -0
- package/app/out/renderer/assets/webidl-BTLTThCm.js +204 -0
- package/app/out/renderer/assets/xquery-BgiOC5Ce.js +525 -0
- package/app/out/renderer/assets/xychartDiagram-f5964ef8-Bhga-YXm.js +1799 -0
- package/app/out/renderer/assets/yacas-b5lAVEIl.js +130 -0
- package/app/out/renderer/assets/z80-BZV19vqv.js +93 -0
- package/app/out/renderer/index.html +13 -0
- package/app/out/skills/community-builtin/README.md +29 -0
- package/app/out/skills/community-builtin/document-docx/SKILL.md +44 -0
- package/app/out/skills/community-builtin/document-docx/scripts/docx-to-markdown.sh +20 -0
- package/app/out/skills/community-builtin/document-docx/scripts/extract-docx-text.sh +28 -0
- package/app/out/skills/community-builtin/document-docx/scripts/init-docx-template.sh +32 -0
- package/app/out/skills/community-builtin/document-docx/scripts/setup-docx-tools.sh +10 -0
- package/app/out/skills/community-builtin/markitdown/SKILL.md +105 -0
- package/app/out/skills/community-builtin/markitdown/scripts/batch-convert.sh +40 -0
- package/app/out/skills/community-builtin/markitdown/scripts/convert-file.sh +24 -0
- package/app/out/skills/community-builtin/markitdown/scripts/setup-markitdown.sh +10 -0
- package/app/out/skills/community-builtin/repo-quick-audit/SKILL.md +27 -0
- package/app/out/skills/community-builtin/repo-quick-audit/scripts/audit-basics.sh +19 -0
- package/app/out/skills/research-pilot-default-project-skills/README.md +23 -0
- package/app/out/skills/research-pilot-default-project-skills/citation-management/SKILL.md +39 -0
- package/app/out/skills/research-pilot-default-project-skills/citation-management/scripts/doi-to-bibtex.sh +25 -0
- package/app/out/skills/research-pilot-default-project-skills/citation-management/scripts/normalize-bibtex-keys.sh +51 -0
- package/app/out/skills/research-pilot-default-project-skills/citation-management/scripts/setup-citation-tools.sh +10 -0
- package/app/out/skills/research-pilot-default-project-skills/citation-management/scripts/validate-bib.sh +31 -0
- package/app/out/skills/research-pilot-default-project-skills/matplotlib/SKILL.md +34 -0
- package/app/out/skills/research-pilot-default-project-skills/matplotlib/references/api_reference.md +412 -0
- package/app/out/skills/research-pilot-default-project-skills/matplotlib/references/common_issues.md +563 -0
- package/app/out/skills/research-pilot-default-project-skills/matplotlib/references/plot_types.md +476 -0
- package/app/out/skills/research-pilot-default-project-skills/matplotlib/references/styling_guide.md +589 -0
- package/app/out/skills/research-pilot-default-project-skills/matplotlib/references/subagent_quickstart.md +30 -0
- package/app/out/skills/research-pilot-default-project-skills/matplotlib/scripts/plot_template.py +401 -0
- package/app/out/skills/research-pilot-default-project-skills/matplotlib/scripts/style_configurator.py +409 -0
- package/app/out/skills/research-pilot-default-project-skills/research-grants/SKILL.md +38 -0
- package/app/out/skills/research-pilot-default-project-skills/research-grants/scripts/check-grant-compliance.sh +40 -0
- package/app/out/skills/research-pilot-default-project-skills/research-grants/scripts/grant-summary-card.sh +32 -0
- package/app/out/skills/research-pilot-default-project-skills/research-grants/scripts/init-grant-structure.sh +70 -0
- package/app/package.json +77 -0
- package/bin/cli.mjs +56 -0
- package/lib/README.md +145 -0
- package/lib/skills/_generated.ts +13 -0
- package/lib/skills/builtin/brainstorming-research-ideas/SKILL.md +280 -0
- package/lib/skills/builtin/coding/SKILL.md +114 -0
- package/lib/skills/builtin/creative-thinking-for-research/SKILL.md +273 -0
- package/lib/skills/builtin/matplotlib/SKILL.md +361 -0
- package/lib/skills/builtin/matplotlib/references/api_reference.md +412 -0
- package/lib/skills/builtin/matplotlib/references/common_issues.md +563 -0
- package/lib/skills/builtin/matplotlib/references/plot_types.md +476 -0
- package/lib/skills/builtin/matplotlib/references/styling_guide.md +589 -0
- package/lib/skills/builtin/matplotlib/scripts/plot_template.py +401 -0
- package/lib/skills/builtin/matplotlib/scripts/style_configurator.py +409 -0
- package/lib/skills/builtin/paper-writing/SKILL.md +554 -0
- package/lib/skills/builtin/paper-writing/references/checklists.md +524 -0
- package/lib/skills/builtin/paper-writing/references/citation-workflow.md +562 -0
- package/lib/skills/builtin/paper-writing/references/reviewer-guidelines.md +462 -0
- package/lib/skills/builtin/paper-writing/references/sources.md +189 -0
- package/lib/skills/builtin/paper-writing/references/systems-conferences.md +260 -0
- package/lib/skills/builtin/paper-writing/references/writing-guide.md +476 -0
- package/lib/skills/builtin/paper-writing/templates/README.md +408 -0
- package/lib/skills/builtin/paper-writing/templates/aaai2026/README.md +534 -0
- package/lib/skills/builtin/paper-writing/templates/aaai2026/aaai2026-unified-supp.tex +144 -0
- package/lib/skills/builtin/paper-writing/templates/aaai2026/aaai2026-unified-template.tex +952 -0
- package/lib/skills/builtin/paper-writing/templates/aaai2026/aaai2026.bib +111 -0
- package/lib/skills/builtin/paper-writing/templates/aaai2026/aaai2026.bst +1493 -0
- package/lib/skills/builtin/paper-writing/templates/aaai2026/aaai2026.sty +315 -0
- package/lib/skills/builtin/paper-writing/templates/acl/README.md +50 -0
- package/lib/skills/builtin/paper-writing/templates/acl/acl.sty +312 -0
- package/lib/skills/builtin/paper-writing/templates/acl/acl_latex.tex +377 -0
- package/lib/skills/builtin/paper-writing/templates/acl/acl_lualatex.tex +101 -0
- package/lib/skills/builtin/paper-writing/templates/acl/acl_natbib.bst +1940 -0
- package/lib/skills/builtin/paper-writing/templates/acl/anthology.bib.txt +26 -0
- package/lib/skills/builtin/paper-writing/templates/acl/custom.bib +70 -0
- package/lib/skills/builtin/paper-writing/templates/acl/formatting.md +326 -0
- package/lib/skills/builtin/paper-writing/templates/asplos2027/main.tex +459 -0
- package/lib/skills/builtin/paper-writing/templates/asplos2027/references.bib +135 -0
- package/lib/skills/builtin/paper-writing/templates/colm2025/README.md +3 -0
- package/lib/skills/builtin/paper-writing/templates/colm2025/colm2025_conference.bib +11 -0
- package/lib/skills/builtin/paper-writing/templates/colm2025/colm2025_conference.bst +1440 -0
- package/lib/skills/builtin/paper-writing/templates/colm2025/colm2025_conference.pdf +0 -0
- package/lib/skills/builtin/paper-writing/templates/colm2025/colm2025_conference.sty +218 -0
- package/lib/skills/builtin/paper-writing/templates/colm2025/colm2025_conference.tex +305 -0
- package/lib/skills/builtin/paper-writing/templates/colm2025/fancyhdr.sty +485 -0
- package/lib/skills/builtin/paper-writing/templates/colm2025/math_commands.tex +508 -0
- package/lib/skills/builtin/paper-writing/templates/colm2025/natbib.sty +1246 -0
- package/lib/skills/builtin/paper-writing/templates/iclr2026/fancyhdr.sty +485 -0
- package/lib/skills/builtin/paper-writing/templates/iclr2026/iclr2026_conference.bib +24 -0
- package/lib/skills/builtin/paper-writing/templates/iclr2026/iclr2026_conference.bst +1440 -0
- package/lib/skills/builtin/paper-writing/templates/iclr2026/iclr2026_conference.pdf +0 -0
- package/lib/skills/builtin/paper-writing/templates/iclr2026/iclr2026_conference.sty +246 -0
- package/lib/skills/builtin/paper-writing/templates/iclr2026/iclr2026_conference.tex +414 -0
- package/lib/skills/builtin/paper-writing/templates/iclr2026/math_commands.tex +508 -0
- package/lib/skills/builtin/paper-writing/templates/iclr2026/natbib.sty +1246 -0
- package/lib/skills/builtin/paper-writing/templates/icml2026/algorithm.sty +79 -0
- package/lib/skills/builtin/paper-writing/templates/icml2026/algorithmic.sty +201 -0
- package/lib/skills/builtin/paper-writing/templates/icml2026/example_paper.bib +75 -0
- package/lib/skills/builtin/paper-writing/templates/icml2026/example_paper.pdf +0 -0
- package/lib/skills/builtin/paper-writing/templates/icml2026/example_paper.tex +662 -0
- package/lib/skills/builtin/paper-writing/templates/icml2026/fancyhdr.sty +864 -0
- package/lib/skills/builtin/paper-writing/templates/icml2026/icml2026.bst +1443 -0
- package/lib/skills/builtin/paper-writing/templates/icml2026/icml2026.sty +767 -0
- package/lib/skills/builtin/paper-writing/templates/icml2026/icml_numpapers.pdf +0 -0
- package/lib/skills/builtin/paper-writing/templates/neurips2025/Makefile +36 -0
- package/lib/skills/builtin/paper-writing/templates/neurips2025/extra_pkgs.tex +53 -0
- package/lib/skills/builtin/paper-writing/templates/neurips2025/main.tex +38 -0
- package/lib/skills/builtin/paper-writing/templates/neurips2025/neurips.sty +382 -0
- package/lib/skills/builtin/paper-writing/templates/nsdi2027/main.tex +426 -0
- package/lib/skills/builtin/paper-writing/templates/nsdi2027/references.bib +151 -0
- package/lib/skills/builtin/paper-writing/templates/nsdi2027/usenix-2020-09.sty +83 -0
- package/lib/skills/builtin/paper-writing/templates/osdi2026/main.tex +429 -0
- package/lib/skills/builtin/paper-writing/templates/osdi2026/references.bib +150 -0
- package/lib/skills/builtin/paper-writing/templates/osdi2026/usenix-2020-09.sty +83 -0
- package/lib/skills/builtin/paper-writing/templates/sosp2026/main.tex +532 -0
- package/lib/skills/builtin/paper-writing/templates/sosp2026/references.bib +148 -0
- package/lib/skills/builtin/research-grants/SKILL.md +958 -0
- package/lib/skills/builtin/research-grants/assets/budget_justification_template.md +453 -0
- package/lib/skills/builtin/research-grants/assets/nih_specific_aims_template.md +166 -0
- package/lib/skills/builtin/research-grants/assets/nsf_project_summary_template.md +92 -0
- package/lib/skills/builtin/research-grants/references/README.md +285 -0
- package/lib/skills/builtin/research-grants/references/broader_impacts.md +392 -0
- package/lib/skills/builtin/research-grants/references/darpa_guidelines.md +636 -0
- package/lib/skills/builtin/research-grants/references/doe_guidelines.md +586 -0
- package/lib/skills/builtin/research-grants/references/nih_guidelines.md +851 -0
- package/lib/skills/builtin/research-grants/references/nsf_guidelines.md +570 -0
- package/lib/skills/builtin/research-grants/references/nstc_guidelines.md +733 -0
- package/lib/skills/builtin/research-grants/references/specific_aims_guide.md +458 -0
- package/lib/skills/builtin/rewrite-humanize/SKILL.md +116 -0
- package/lib/skills/builtin/rewrite-humanize/references/cs-venue-tone.md +57 -0
- package/lib/skills/builtin/rewrite-humanize/references/lexicon.md +50 -0
- package/lib/skills/builtin/scholar-evaluation/SKILL.md +300 -0
- package/lib/skills/builtin/scholar-evaluation/references/evaluation_framework.md +663 -0
- package/lib/skills/builtin/scholar-evaluation/scripts/calculate_scores.py +379 -0
- package/lib/skills/builtin/scientific-schematics/SKILL.md +603 -0
- package/lib/skills/builtin/scientific-schematics/references/QUICK_REFERENCE.md +182 -0
- package/lib/skills/builtin/scientific-schematics/references/README.md +292 -0
- package/lib/skills/builtin/scientific-schematics/references/best_practices.md +560 -0
- package/lib/skills/builtin/scientific-schematics/scripts/__pycache__/generate_schematic.cpython-312.pyc +0 -0
- package/lib/skills/builtin/scientific-schematics/scripts/__pycache__/generate_schematic_ai.cpython-312.pyc +0 -0
- package/lib/skills/builtin/scientific-schematics/scripts/example_usage.sh +85 -0
- package/lib/skills/builtin/scientific-schematics/scripts/generate_schematic.py +141 -0
- package/lib/skills/builtin/scientific-schematics/scripts/generate_schematic_ai.py +910 -0
- package/lib/skills/builtin/scientific-visualization/SKILL.md +749 -0
- package/lib/skills/builtin/scientific-visualization/assets/color_palettes.py +197 -0
- package/lib/skills/builtin/scientific-visualization/assets/nature.mplstyle +63 -0
- package/lib/skills/builtin/scientific-visualization/assets/presentation.mplstyle +61 -0
- package/lib/skills/builtin/scientific-visualization/assets/publication.mplstyle +68 -0
- package/lib/skills/builtin/scientific-visualization/references/color_palettes.md +348 -0
- package/lib/skills/builtin/scientific-visualization/references/journal_requirements.md +320 -0
- package/lib/skills/builtin/scientific-visualization/references/matplotlib_examples.md +620 -0
- package/lib/skills/builtin/scientific-visualization/references/publication_guidelines.md +205 -0
- package/lib/skills/builtin/scientific-visualization/scripts/figure_export.py +343 -0
- package/lib/skills/builtin/scientific-visualization/scripts/style_presets.py +416 -0
- package/lib/skills/builtin/scientific-writing/SKILL.md +745 -0
- package/lib/skills/builtin/scientific-writing/assets/REPORT_FORMATTING_GUIDE.md +574 -0
- package/lib/skills/builtin/scientific-writing/assets/scientific_report.sty +606 -0
- package/lib/skills/builtin/scientific-writing/assets/scientific_report_template.tex +449 -0
- package/lib/skills/builtin/scientific-writing/references/citation_styles.md +720 -0
- package/lib/skills/builtin/scientific-writing/references/figures_tables.md +806 -0
- package/lib/skills/builtin/scientific-writing/references/imrad_structure.md +686 -0
- package/lib/skills/builtin/scientific-writing/references/professional_report_formatting.md +664 -0
- package/lib/skills/builtin/scientific-writing/references/reporting_guidelines.md +748 -0
- package/lib/skills/builtin/scientific-writing/references/writing_principles.md +824 -0
- package/lib/skills/builtin/seaborn/SKILL.md +674 -0
- package/lib/skills/builtin/seaborn/references/examples.md +822 -0
- package/lib/skills/builtin/seaborn/references/function_reference.md +770 -0
- package/lib/skills/builtin/seaborn/references/objects_interface.md +964 -0
- package/lib/skills/data-analysis/SKILL.md +285 -0
- package/lib/skills/generate-skill-content.mjs +58 -0
- package/lib/skills/index.ts +34 -0
- package/lib/skills/loader.ts +452 -0
- package/package.json +62 -0
|
@@ -0,0 +1,2217 @@
|
|
|
1
|
+
import { a as baseFlatten, b as baseClone, c as baseIteratee, k as keys, d as baseFindIndex, e as baseEach, f as arrayMap, g as castFunction, h as baseForOwn, j as hasPath, l as castPath, t as toKey, m as baseGet, n as hasIn, o as toString, G as Graph, p as forEach, i as isUndefined, q as filter, v as values, r as reduce } from "./graph-DpC13d95.js";
|
|
2
|
+
import { b4 as toNumber, b5 as setToString, b6 as overRest, b7 as baseRest, b8 as isIterateeCall, b9 as keysIn, ba as eq, bb as isArrayLike, bc as isArray, bd as baseFor, be as baseAssignValue, bf as isSymbol, bg as identity, bh as isObject, bi as isIndex, bj as assignValue, bk as baseUnary, bl as constant, bm as merge } from "./MilkdownMarkdownEditor-bLPxrCVb.js";
|
|
3
|
+
var INFINITY = 1 / 0, MAX_INTEGER = 17976931348623157e292;
|
|
4
|
+
function toFinite(value) {
|
|
5
|
+
if (!value) {
|
|
6
|
+
return value === 0 ? value : 0;
|
|
7
|
+
}
|
|
8
|
+
value = toNumber(value);
|
|
9
|
+
if (value === INFINITY || value === -INFINITY) {
|
|
10
|
+
var sign = value < 0 ? -1 : 1;
|
|
11
|
+
return sign * MAX_INTEGER;
|
|
12
|
+
}
|
|
13
|
+
return value === value ? value : 0;
|
|
14
|
+
}
|
|
15
|
+
function toInteger(value) {
|
|
16
|
+
var result = toFinite(value), remainder = result % 1;
|
|
17
|
+
return result === result ? remainder ? result - remainder : result : 0;
|
|
18
|
+
}
|
|
19
|
+
function flatten(array) {
|
|
20
|
+
var length = array == null ? 0 : array.length;
|
|
21
|
+
return length ? baseFlatten(array) : [];
|
|
22
|
+
}
|
|
23
|
+
function flatRest(func) {
|
|
24
|
+
return setToString(overRest(func, void 0, flatten), func + "");
|
|
25
|
+
}
|
|
26
|
+
var CLONE_DEEP_FLAG = 1, CLONE_SYMBOLS_FLAG = 4;
|
|
27
|
+
function cloneDeep(value) {
|
|
28
|
+
return baseClone(value, CLONE_DEEP_FLAG | CLONE_SYMBOLS_FLAG);
|
|
29
|
+
}
|
|
30
|
+
var objectProto$1 = Object.prototype;
|
|
31
|
+
var hasOwnProperty$1 = objectProto$1.hasOwnProperty;
|
|
32
|
+
var defaults = baseRest(function(object, sources) {
|
|
33
|
+
object = Object(object);
|
|
34
|
+
var index = -1;
|
|
35
|
+
var length = sources.length;
|
|
36
|
+
var guard = length > 2 ? sources[2] : void 0;
|
|
37
|
+
if (guard && isIterateeCall(sources[0], sources[1], guard)) {
|
|
38
|
+
length = 1;
|
|
39
|
+
}
|
|
40
|
+
while (++index < length) {
|
|
41
|
+
var source = sources[index];
|
|
42
|
+
var props = keysIn(source);
|
|
43
|
+
var propsIndex = -1;
|
|
44
|
+
var propsLength = props.length;
|
|
45
|
+
while (++propsIndex < propsLength) {
|
|
46
|
+
var key = props[propsIndex];
|
|
47
|
+
var value = object[key];
|
|
48
|
+
if (value === void 0 || eq(value, objectProto$1[key]) && !hasOwnProperty$1.call(object, key)) {
|
|
49
|
+
object[key] = source[key];
|
|
50
|
+
}
|
|
51
|
+
}
|
|
52
|
+
}
|
|
53
|
+
return object;
|
|
54
|
+
});
|
|
55
|
+
function last(array) {
|
|
56
|
+
var length = array == null ? 0 : array.length;
|
|
57
|
+
return length ? array[length - 1] : void 0;
|
|
58
|
+
}
|
|
59
|
+
function createFind(findIndexFunc) {
|
|
60
|
+
return function(collection, predicate, fromIndex) {
|
|
61
|
+
var iterable = Object(collection);
|
|
62
|
+
if (!isArrayLike(collection)) {
|
|
63
|
+
var iteratee = baseIteratee(predicate);
|
|
64
|
+
collection = keys(collection);
|
|
65
|
+
predicate = function(key) {
|
|
66
|
+
return iteratee(iterable[key], key, iterable);
|
|
67
|
+
};
|
|
68
|
+
}
|
|
69
|
+
var index = findIndexFunc(collection, predicate, fromIndex);
|
|
70
|
+
return index > -1 ? iterable[iteratee ? collection[index] : index] : void 0;
|
|
71
|
+
};
|
|
72
|
+
}
|
|
73
|
+
var nativeMax$1 = Math.max;
|
|
74
|
+
function findIndex(array, predicate, fromIndex) {
|
|
75
|
+
var length = array == null ? 0 : array.length;
|
|
76
|
+
if (!length) {
|
|
77
|
+
return -1;
|
|
78
|
+
}
|
|
79
|
+
var index = fromIndex == null ? 0 : toInteger(fromIndex);
|
|
80
|
+
if (index < 0) {
|
|
81
|
+
index = nativeMax$1(length + index, 0);
|
|
82
|
+
}
|
|
83
|
+
return baseFindIndex(array, baseIteratee(predicate), index);
|
|
84
|
+
}
|
|
85
|
+
var find = createFind(findIndex);
|
|
86
|
+
function baseMap(collection, iteratee) {
|
|
87
|
+
var index = -1, result = isArrayLike(collection) ? Array(collection.length) : [];
|
|
88
|
+
baseEach(collection, function(value, key, collection2) {
|
|
89
|
+
result[++index] = iteratee(value, key, collection2);
|
|
90
|
+
});
|
|
91
|
+
return result;
|
|
92
|
+
}
|
|
93
|
+
function map(collection, iteratee) {
|
|
94
|
+
var func = isArray(collection) ? arrayMap : baseMap;
|
|
95
|
+
return func(collection, baseIteratee(iteratee));
|
|
96
|
+
}
|
|
97
|
+
function forIn(object, iteratee) {
|
|
98
|
+
return object == null ? object : baseFor(object, castFunction(iteratee), keysIn);
|
|
99
|
+
}
|
|
100
|
+
function forOwn(object, iteratee) {
|
|
101
|
+
return object && baseForOwn(object, castFunction(iteratee));
|
|
102
|
+
}
|
|
103
|
+
function baseGt(value, other) {
|
|
104
|
+
return value > other;
|
|
105
|
+
}
|
|
106
|
+
var objectProto = Object.prototype;
|
|
107
|
+
var hasOwnProperty = objectProto.hasOwnProperty;
|
|
108
|
+
function baseHas(object, key) {
|
|
109
|
+
return object != null && hasOwnProperty.call(object, key);
|
|
110
|
+
}
|
|
111
|
+
function has(object, path) {
|
|
112
|
+
return object != null && hasPath(object, path, baseHas);
|
|
113
|
+
}
|
|
114
|
+
function baseLt(value, other) {
|
|
115
|
+
return value < other;
|
|
116
|
+
}
|
|
117
|
+
function mapValues(object, iteratee) {
|
|
118
|
+
var result = {};
|
|
119
|
+
iteratee = baseIteratee(iteratee);
|
|
120
|
+
baseForOwn(object, function(value, key, object2) {
|
|
121
|
+
baseAssignValue(result, key, iteratee(value, key, object2));
|
|
122
|
+
});
|
|
123
|
+
return result;
|
|
124
|
+
}
|
|
125
|
+
function baseExtremum(array, iteratee, comparator) {
|
|
126
|
+
var index = -1, length = array.length;
|
|
127
|
+
while (++index < length) {
|
|
128
|
+
var value = array[index], current = iteratee(value);
|
|
129
|
+
if (current != null && (computed === void 0 ? current === current && !isSymbol(current) : comparator(current, computed))) {
|
|
130
|
+
var computed = current, result = value;
|
|
131
|
+
}
|
|
132
|
+
}
|
|
133
|
+
return result;
|
|
134
|
+
}
|
|
135
|
+
function max(array) {
|
|
136
|
+
return array && array.length ? baseExtremum(array, identity, baseGt) : void 0;
|
|
137
|
+
}
|
|
138
|
+
function min(array) {
|
|
139
|
+
return array && array.length ? baseExtremum(array, identity, baseLt) : void 0;
|
|
140
|
+
}
|
|
141
|
+
function minBy(array, iteratee) {
|
|
142
|
+
return array && array.length ? baseExtremum(array, baseIteratee(iteratee), baseLt) : void 0;
|
|
143
|
+
}
|
|
144
|
+
function baseSet(object, path, value, customizer) {
|
|
145
|
+
if (!isObject(object)) {
|
|
146
|
+
return object;
|
|
147
|
+
}
|
|
148
|
+
path = castPath(path, object);
|
|
149
|
+
var index = -1, length = path.length, lastIndex = length - 1, nested = object;
|
|
150
|
+
while (nested != null && ++index < length) {
|
|
151
|
+
var key = toKey(path[index]), newValue = value;
|
|
152
|
+
if (key === "__proto__" || key === "constructor" || key === "prototype") {
|
|
153
|
+
return object;
|
|
154
|
+
}
|
|
155
|
+
if (index != lastIndex) {
|
|
156
|
+
var objValue = nested[key];
|
|
157
|
+
newValue = void 0;
|
|
158
|
+
if (newValue === void 0) {
|
|
159
|
+
newValue = isObject(objValue) ? objValue : isIndex(path[index + 1]) ? [] : {};
|
|
160
|
+
}
|
|
161
|
+
}
|
|
162
|
+
assignValue(nested, key, newValue);
|
|
163
|
+
nested = nested[key];
|
|
164
|
+
}
|
|
165
|
+
return object;
|
|
166
|
+
}
|
|
167
|
+
function basePickBy(object, paths, predicate) {
|
|
168
|
+
var index = -1, length = paths.length, result = {};
|
|
169
|
+
while (++index < length) {
|
|
170
|
+
var path = paths[index], value = baseGet(object, path);
|
|
171
|
+
if (predicate(value, path)) {
|
|
172
|
+
baseSet(result, castPath(path, object), value);
|
|
173
|
+
}
|
|
174
|
+
}
|
|
175
|
+
return result;
|
|
176
|
+
}
|
|
177
|
+
function baseSortBy(array, comparer) {
|
|
178
|
+
var length = array.length;
|
|
179
|
+
array.sort(comparer);
|
|
180
|
+
while (length--) {
|
|
181
|
+
array[length] = array[length].value;
|
|
182
|
+
}
|
|
183
|
+
return array;
|
|
184
|
+
}
|
|
185
|
+
function compareAscending(value, other) {
|
|
186
|
+
if (value !== other) {
|
|
187
|
+
var valIsDefined = value !== void 0, valIsNull = value === null, valIsReflexive = value === value, valIsSymbol = isSymbol(value);
|
|
188
|
+
var othIsDefined = other !== void 0, othIsNull = other === null, othIsReflexive = other === other, othIsSymbol = isSymbol(other);
|
|
189
|
+
if (!othIsNull && !othIsSymbol && !valIsSymbol && value > other || valIsSymbol && othIsDefined && othIsReflexive && !othIsNull && !othIsSymbol || valIsNull && othIsDefined && othIsReflexive || !valIsDefined && othIsReflexive || !valIsReflexive) {
|
|
190
|
+
return 1;
|
|
191
|
+
}
|
|
192
|
+
if (!valIsNull && !valIsSymbol && !othIsSymbol && value < other || othIsSymbol && valIsDefined && valIsReflexive && !valIsNull && !valIsSymbol || othIsNull && valIsDefined && valIsReflexive || !othIsDefined && valIsReflexive || !othIsReflexive) {
|
|
193
|
+
return -1;
|
|
194
|
+
}
|
|
195
|
+
}
|
|
196
|
+
return 0;
|
|
197
|
+
}
|
|
198
|
+
function compareMultiple(object, other, orders) {
|
|
199
|
+
var index = -1, objCriteria = object.criteria, othCriteria = other.criteria, length = objCriteria.length, ordersLength = orders.length;
|
|
200
|
+
while (++index < length) {
|
|
201
|
+
var result = compareAscending(objCriteria[index], othCriteria[index]);
|
|
202
|
+
if (result) {
|
|
203
|
+
if (index >= ordersLength) {
|
|
204
|
+
return result;
|
|
205
|
+
}
|
|
206
|
+
var order2 = orders[index];
|
|
207
|
+
return result * (order2 == "desc" ? -1 : 1);
|
|
208
|
+
}
|
|
209
|
+
}
|
|
210
|
+
return object.index - other.index;
|
|
211
|
+
}
|
|
212
|
+
function baseOrderBy(collection, iteratees, orders) {
|
|
213
|
+
if (iteratees.length) {
|
|
214
|
+
iteratees = arrayMap(iteratees, function(iteratee) {
|
|
215
|
+
if (isArray(iteratee)) {
|
|
216
|
+
return function(value) {
|
|
217
|
+
return baseGet(value, iteratee.length === 1 ? iteratee[0] : iteratee);
|
|
218
|
+
};
|
|
219
|
+
}
|
|
220
|
+
return iteratee;
|
|
221
|
+
});
|
|
222
|
+
} else {
|
|
223
|
+
iteratees = [identity];
|
|
224
|
+
}
|
|
225
|
+
var index = -1;
|
|
226
|
+
iteratees = arrayMap(iteratees, baseUnary(baseIteratee));
|
|
227
|
+
var result = baseMap(collection, function(value, key, collection2) {
|
|
228
|
+
var criteria = arrayMap(iteratees, function(iteratee) {
|
|
229
|
+
return iteratee(value);
|
|
230
|
+
});
|
|
231
|
+
return { "criteria": criteria, "index": ++index, "value": value };
|
|
232
|
+
});
|
|
233
|
+
return baseSortBy(result, function(object, other) {
|
|
234
|
+
return compareMultiple(object, other, orders);
|
|
235
|
+
});
|
|
236
|
+
}
|
|
237
|
+
function basePick(object, paths) {
|
|
238
|
+
return basePickBy(object, paths, function(value, path) {
|
|
239
|
+
return hasIn(object, path);
|
|
240
|
+
});
|
|
241
|
+
}
|
|
242
|
+
var pick = flatRest(function(object, paths) {
|
|
243
|
+
return object == null ? {} : basePick(object, paths);
|
|
244
|
+
});
|
|
245
|
+
var nativeCeil = Math.ceil, nativeMax = Math.max;
|
|
246
|
+
function baseRange(start, end, step, fromRight) {
|
|
247
|
+
var index = -1, length = nativeMax(nativeCeil((end - start) / (step || 1)), 0), result = Array(length);
|
|
248
|
+
while (length--) {
|
|
249
|
+
result[++index] = start;
|
|
250
|
+
start += step;
|
|
251
|
+
}
|
|
252
|
+
return result;
|
|
253
|
+
}
|
|
254
|
+
function createRange(fromRight) {
|
|
255
|
+
return function(start, end, step) {
|
|
256
|
+
if (step && typeof step != "number" && isIterateeCall(start, end, step)) {
|
|
257
|
+
end = step = void 0;
|
|
258
|
+
}
|
|
259
|
+
start = toFinite(start);
|
|
260
|
+
if (end === void 0) {
|
|
261
|
+
end = start;
|
|
262
|
+
start = 0;
|
|
263
|
+
} else {
|
|
264
|
+
end = toFinite(end);
|
|
265
|
+
}
|
|
266
|
+
step = step === void 0 ? start < end ? 1 : -1 : toFinite(step);
|
|
267
|
+
return baseRange(start, end, step);
|
|
268
|
+
};
|
|
269
|
+
}
|
|
270
|
+
var range = createRange();
|
|
271
|
+
var sortBy = baseRest(function(collection, iteratees) {
|
|
272
|
+
if (collection == null) {
|
|
273
|
+
return [];
|
|
274
|
+
}
|
|
275
|
+
var length = iteratees.length;
|
|
276
|
+
if (length > 1 && isIterateeCall(collection, iteratees[0], iteratees[1])) {
|
|
277
|
+
iteratees = [];
|
|
278
|
+
} else if (length > 2 && isIterateeCall(iteratees[0], iteratees[1], iteratees[2])) {
|
|
279
|
+
iteratees = [iteratees[0]];
|
|
280
|
+
}
|
|
281
|
+
return baseOrderBy(collection, baseFlatten(iteratees), []);
|
|
282
|
+
});
|
|
283
|
+
var idCounter = 0;
|
|
284
|
+
function uniqueId(prefix) {
|
|
285
|
+
var id = ++idCounter;
|
|
286
|
+
return toString(prefix) + id;
|
|
287
|
+
}
|
|
288
|
+
function baseZipObject(props, values2, assignFunc) {
|
|
289
|
+
var index = -1, length = props.length, valsLength = values2.length, result = {};
|
|
290
|
+
while (++index < length) {
|
|
291
|
+
var value = index < valsLength ? values2[index] : void 0;
|
|
292
|
+
assignFunc(result, props[index], value);
|
|
293
|
+
}
|
|
294
|
+
return result;
|
|
295
|
+
}
|
|
296
|
+
function zipObject(props, values2) {
|
|
297
|
+
return baseZipObject(props || [], values2 || [], assignValue);
|
|
298
|
+
}
|
|
299
|
+
class List {
|
|
300
|
+
constructor() {
|
|
301
|
+
var sentinel = {};
|
|
302
|
+
sentinel._next = sentinel._prev = sentinel;
|
|
303
|
+
this._sentinel = sentinel;
|
|
304
|
+
}
|
|
305
|
+
dequeue() {
|
|
306
|
+
var sentinel = this._sentinel;
|
|
307
|
+
var entry = sentinel._prev;
|
|
308
|
+
if (entry !== sentinel) {
|
|
309
|
+
unlink(entry);
|
|
310
|
+
return entry;
|
|
311
|
+
}
|
|
312
|
+
}
|
|
313
|
+
enqueue(entry) {
|
|
314
|
+
var sentinel = this._sentinel;
|
|
315
|
+
if (entry._prev && entry._next) {
|
|
316
|
+
unlink(entry);
|
|
317
|
+
}
|
|
318
|
+
entry._next = sentinel._next;
|
|
319
|
+
sentinel._next._prev = entry;
|
|
320
|
+
sentinel._next = entry;
|
|
321
|
+
entry._prev = sentinel;
|
|
322
|
+
}
|
|
323
|
+
toString() {
|
|
324
|
+
var strs = [];
|
|
325
|
+
var sentinel = this._sentinel;
|
|
326
|
+
var curr = sentinel._prev;
|
|
327
|
+
while (curr !== sentinel) {
|
|
328
|
+
strs.push(JSON.stringify(curr, filterOutLinks));
|
|
329
|
+
curr = curr._prev;
|
|
330
|
+
}
|
|
331
|
+
return "[" + strs.join(", ") + "]";
|
|
332
|
+
}
|
|
333
|
+
}
|
|
334
|
+
function unlink(entry) {
|
|
335
|
+
entry._prev._next = entry._next;
|
|
336
|
+
entry._next._prev = entry._prev;
|
|
337
|
+
delete entry._next;
|
|
338
|
+
delete entry._prev;
|
|
339
|
+
}
|
|
340
|
+
function filterOutLinks(k, v) {
|
|
341
|
+
if (k !== "_next" && k !== "_prev") {
|
|
342
|
+
return v;
|
|
343
|
+
}
|
|
344
|
+
}
|
|
345
|
+
var DEFAULT_WEIGHT_FN = constant(1);
|
|
346
|
+
function greedyFAS(g, weightFn) {
|
|
347
|
+
if (g.nodeCount() <= 1) {
|
|
348
|
+
return [];
|
|
349
|
+
}
|
|
350
|
+
var state = buildState(g, weightFn || DEFAULT_WEIGHT_FN);
|
|
351
|
+
var results = doGreedyFAS(state.graph, state.buckets, state.zeroIdx);
|
|
352
|
+
return flatten(
|
|
353
|
+
map(results, function(e) {
|
|
354
|
+
return g.outEdges(e.v, e.w);
|
|
355
|
+
})
|
|
356
|
+
);
|
|
357
|
+
}
|
|
358
|
+
function doGreedyFAS(g, buckets, zeroIdx) {
|
|
359
|
+
var results = [];
|
|
360
|
+
var sources = buckets[buckets.length - 1];
|
|
361
|
+
var sinks = buckets[0];
|
|
362
|
+
var entry;
|
|
363
|
+
while (g.nodeCount()) {
|
|
364
|
+
while (entry = sinks.dequeue()) {
|
|
365
|
+
removeNode(g, buckets, zeroIdx, entry);
|
|
366
|
+
}
|
|
367
|
+
while (entry = sources.dequeue()) {
|
|
368
|
+
removeNode(g, buckets, zeroIdx, entry);
|
|
369
|
+
}
|
|
370
|
+
if (g.nodeCount()) {
|
|
371
|
+
for (var i = buckets.length - 2; i > 0; --i) {
|
|
372
|
+
entry = buckets[i].dequeue();
|
|
373
|
+
if (entry) {
|
|
374
|
+
results = results.concat(removeNode(g, buckets, zeroIdx, entry, true));
|
|
375
|
+
break;
|
|
376
|
+
}
|
|
377
|
+
}
|
|
378
|
+
}
|
|
379
|
+
}
|
|
380
|
+
return results;
|
|
381
|
+
}
|
|
382
|
+
function removeNode(g, buckets, zeroIdx, entry, collectPredecessors) {
|
|
383
|
+
var results = collectPredecessors ? [] : void 0;
|
|
384
|
+
forEach(g.inEdges(entry.v), function(edge) {
|
|
385
|
+
var weight = g.edge(edge);
|
|
386
|
+
var uEntry = g.node(edge.v);
|
|
387
|
+
if (collectPredecessors) {
|
|
388
|
+
results.push({ v: edge.v, w: edge.w });
|
|
389
|
+
}
|
|
390
|
+
uEntry.out -= weight;
|
|
391
|
+
assignBucket(buckets, zeroIdx, uEntry);
|
|
392
|
+
});
|
|
393
|
+
forEach(g.outEdges(entry.v), function(edge) {
|
|
394
|
+
var weight = g.edge(edge);
|
|
395
|
+
var w = edge.w;
|
|
396
|
+
var wEntry = g.node(w);
|
|
397
|
+
wEntry["in"] -= weight;
|
|
398
|
+
assignBucket(buckets, zeroIdx, wEntry);
|
|
399
|
+
});
|
|
400
|
+
g.removeNode(entry.v);
|
|
401
|
+
return results;
|
|
402
|
+
}
|
|
403
|
+
function buildState(g, weightFn) {
|
|
404
|
+
var fasGraph = new Graph();
|
|
405
|
+
var maxIn = 0;
|
|
406
|
+
var maxOut = 0;
|
|
407
|
+
forEach(g.nodes(), function(v) {
|
|
408
|
+
fasGraph.setNode(v, { v, in: 0, out: 0 });
|
|
409
|
+
});
|
|
410
|
+
forEach(g.edges(), function(e) {
|
|
411
|
+
var prevWeight = fasGraph.edge(e.v, e.w) || 0;
|
|
412
|
+
var weight = weightFn(e);
|
|
413
|
+
var edgeWeight = prevWeight + weight;
|
|
414
|
+
fasGraph.setEdge(e.v, e.w, edgeWeight);
|
|
415
|
+
maxOut = Math.max(maxOut, fasGraph.node(e.v).out += weight);
|
|
416
|
+
maxIn = Math.max(maxIn, fasGraph.node(e.w)["in"] += weight);
|
|
417
|
+
});
|
|
418
|
+
var buckets = range(maxOut + maxIn + 3).map(function() {
|
|
419
|
+
return new List();
|
|
420
|
+
});
|
|
421
|
+
var zeroIdx = maxIn + 1;
|
|
422
|
+
forEach(fasGraph.nodes(), function(v) {
|
|
423
|
+
assignBucket(buckets, zeroIdx, fasGraph.node(v));
|
|
424
|
+
});
|
|
425
|
+
return { graph: fasGraph, buckets, zeroIdx };
|
|
426
|
+
}
|
|
427
|
+
function assignBucket(buckets, zeroIdx, entry) {
|
|
428
|
+
if (!entry.out) {
|
|
429
|
+
buckets[0].enqueue(entry);
|
|
430
|
+
} else if (!entry["in"]) {
|
|
431
|
+
buckets[buckets.length - 1].enqueue(entry);
|
|
432
|
+
} else {
|
|
433
|
+
buckets[entry.out - entry["in"] + zeroIdx].enqueue(entry);
|
|
434
|
+
}
|
|
435
|
+
}
|
|
436
|
+
function run$2(g) {
|
|
437
|
+
var fas = g.graph().acyclicer === "greedy" ? greedyFAS(g, weightFn(g)) : dfsFAS(g);
|
|
438
|
+
forEach(fas, function(e) {
|
|
439
|
+
var label = g.edge(e);
|
|
440
|
+
g.removeEdge(e);
|
|
441
|
+
label.forwardName = e.name;
|
|
442
|
+
label.reversed = true;
|
|
443
|
+
g.setEdge(e.w, e.v, label, uniqueId("rev"));
|
|
444
|
+
});
|
|
445
|
+
function weightFn(g2) {
|
|
446
|
+
return function(e) {
|
|
447
|
+
return g2.edge(e).weight;
|
|
448
|
+
};
|
|
449
|
+
}
|
|
450
|
+
}
|
|
451
|
+
function dfsFAS(g) {
|
|
452
|
+
var fas = [];
|
|
453
|
+
var stack = {};
|
|
454
|
+
var visited = {};
|
|
455
|
+
function dfs2(v) {
|
|
456
|
+
if (Object.prototype.hasOwnProperty.call(visited, v)) {
|
|
457
|
+
return;
|
|
458
|
+
}
|
|
459
|
+
visited[v] = true;
|
|
460
|
+
stack[v] = true;
|
|
461
|
+
forEach(g.outEdges(v), function(e) {
|
|
462
|
+
if (Object.prototype.hasOwnProperty.call(stack, e.w)) {
|
|
463
|
+
fas.push(e);
|
|
464
|
+
} else {
|
|
465
|
+
dfs2(e.w);
|
|
466
|
+
}
|
|
467
|
+
});
|
|
468
|
+
delete stack[v];
|
|
469
|
+
}
|
|
470
|
+
forEach(g.nodes(), dfs2);
|
|
471
|
+
return fas;
|
|
472
|
+
}
|
|
473
|
+
function undo$2(g) {
|
|
474
|
+
forEach(g.edges(), function(e) {
|
|
475
|
+
var label = g.edge(e);
|
|
476
|
+
if (label.reversed) {
|
|
477
|
+
g.removeEdge(e);
|
|
478
|
+
var forwardName = label.forwardName;
|
|
479
|
+
delete label.reversed;
|
|
480
|
+
delete label.forwardName;
|
|
481
|
+
g.setEdge(e.w, e.v, label, forwardName);
|
|
482
|
+
}
|
|
483
|
+
});
|
|
484
|
+
}
|
|
485
|
+
function addDummyNode(g, type, attrs, name) {
|
|
486
|
+
var v;
|
|
487
|
+
do {
|
|
488
|
+
v = uniqueId(name);
|
|
489
|
+
} while (g.hasNode(v));
|
|
490
|
+
attrs.dummy = type;
|
|
491
|
+
g.setNode(v, attrs);
|
|
492
|
+
return v;
|
|
493
|
+
}
|
|
494
|
+
function simplify(g) {
|
|
495
|
+
var simplified = new Graph().setGraph(g.graph());
|
|
496
|
+
forEach(g.nodes(), function(v) {
|
|
497
|
+
simplified.setNode(v, g.node(v));
|
|
498
|
+
});
|
|
499
|
+
forEach(g.edges(), function(e) {
|
|
500
|
+
var simpleLabel = simplified.edge(e.v, e.w) || { weight: 0, minlen: 1 };
|
|
501
|
+
var label = g.edge(e);
|
|
502
|
+
simplified.setEdge(e.v, e.w, {
|
|
503
|
+
weight: simpleLabel.weight + label.weight,
|
|
504
|
+
minlen: Math.max(simpleLabel.minlen, label.minlen)
|
|
505
|
+
});
|
|
506
|
+
});
|
|
507
|
+
return simplified;
|
|
508
|
+
}
|
|
509
|
+
function asNonCompoundGraph(g) {
|
|
510
|
+
var simplified = new Graph({ multigraph: g.isMultigraph() }).setGraph(g.graph());
|
|
511
|
+
forEach(g.nodes(), function(v) {
|
|
512
|
+
if (!g.children(v).length) {
|
|
513
|
+
simplified.setNode(v, g.node(v));
|
|
514
|
+
}
|
|
515
|
+
});
|
|
516
|
+
forEach(g.edges(), function(e) {
|
|
517
|
+
simplified.setEdge(e, g.edge(e));
|
|
518
|
+
});
|
|
519
|
+
return simplified;
|
|
520
|
+
}
|
|
521
|
+
function intersectRect(rect, point) {
|
|
522
|
+
var x = rect.x;
|
|
523
|
+
var y = rect.y;
|
|
524
|
+
var dx = point.x - x;
|
|
525
|
+
var dy = point.y - y;
|
|
526
|
+
var w = rect.width / 2;
|
|
527
|
+
var h = rect.height / 2;
|
|
528
|
+
if (!dx && !dy) {
|
|
529
|
+
throw new Error("Not possible to find intersection inside of the rectangle");
|
|
530
|
+
}
|
|
531
|
+
var sx, sy;
|
|
532
|
+
if (Math.abs(dy) * w > Math.abs(dx) * h) {
|
|
533
|
+
if (dy < 0) {
|
|
534
|
+
h = -h;
|
|
535
|
+
}
|
|
536
|
+
sx = h * dx / dy;
|
|
537
|
+
sy = h;
|
|
538
|
+
} else {
|
|
539
|
+
if (dx < 0) {
|
|
540
|
+
w = -w;
|
|
541
|
+
}
|
|
542
|
+
sx = w;
|
|
543
|
+
sy = w * dy / dx;
|
|
544
|
+
}
|
|
545
|
+
return { x: x + sx, y: y + sy };
|
|
546
|
+
}
|
|
547
|
+
function buildLayerMatrix(g) {
|
|
548
|
+
var layering = map(range(maxRank(g) + 1), function() {
|
|
549
|
+
return [];
|
|
550
|
+
});
|
|
551
|
+
forEach(g.nodes(), function(v) {
|
|
552
|
+
var node = g.node(v);
|
|
553
|
+
var rank2 = node.rank;
|
|
554
|
+
if (!isUndefined(rank2)) {
|
|
555
|
+
layering[rank2][node.order] = v;
|
|
556
|
+
}
|
|
557
|
+
});
|
|
558
|
+
return layering;
|
|
559
|
+
}
|
|
560
|
+
function normalizeRanks(g) {
|
|
561
|
+
var min$1 = min(
|
|
562
|
+
map(g.nodes(), function(v) {
|
|
563
|
+
return g.node(v).rank;
|
|
564
|
+
})
|
|
565
|
+
);
|
|
566
|
+
forEach(g.nodes(), function(v) {
|
|
567
|
+
var node = g.node(v);
|
|
568
|
+
if (has(node, "rank")) {
|
|
569
|
+
node.rank -= min$1;
|
|
570
|
+
}
|
|
571
|
+
});
|
|
572
|
+
}
|
|
573
|
+
function removeEmptyRanks(g) {
|
|
574
|
+
var offset = min(
|
|
575
|
+
map(g.nodes(), function(v) {
|
|
576
|
+
return g.node(v).rank;
|
|
577
|
+
})
|
|
578
|
+
);
|
|
579
|
+
var layers = [];
|
|
580
|
+
forEach(g.nodes(), function(v) {
|
|
581
|
+
var rank2 = g.node(v).rank - offset;
|
|
582
|
+
if (!layers[rank2]) {
|
|
583
|
+
layers[rank2] = [];
|
|
584
|
+
}
|
|
585
|
+
layers[rank2].push(v);
|
|
586
|
+
});
|
|
587
|
+
var delta = 0;
|
|
588
|
+
var nodeRankFactor = g.graph().nodeRankFactor;
|
|
589
|
+
forEach(layers, function(vs, i) {
|
|
590
|
+
if (isUndefined(vs) && i % nodeRankFactor !== 0) {
|
|
591
|
+
--delta;
|
|
592
|
+
} else if (delta) {
|
|
593
|
+
forEach(vs, function(v) {
|
|
594
|
+
g.node(v).rank += delta;
|
|
595
|
+
});
|
|
596
|
+
}
|
|
597
|
+
});
|
|
598
|
+
}
|
|
599
|
+
function addBorderNode$1(g, prefix, rank2, order2) {
|
|
600
|
+
var node = {
|
|
601
|
+
width: 0,
|
|
602
|
+
height: 0
|
|
603
|
+
};
|
|
604
|
+
if (arguments.length >= 4) {
|
|
605
|
+
node.rank = rank2;
|
|
606
|
+
node.order = order2;
|
|
607
|
+
}
|
|
608
|
+
return addDummyNode(g, "border", node, prefix);
|
|
609
|
+
}
|
|
610
|
+
function maxRank(g) {
|
|
611
|
+
return max(
|
|
612
|
+
map(g.nodes(), function(v) {
|
|
613
|
+
var rank2 = g.node(v).rank;
|
|
614
|
+
if (!isUndefined(rank2)) {
|
|
615
|
+
return rank2;
|
|
616
|
+
}
|
|
617
|
+
})
|
|
618
|
+
);
|
|
619
|
+
}
|
|
620
|
+
function partition(collection, fn) {
|
|
621
|
+
var result = { lhs: [], rhs: [] };
|
|
622
|
+
forEach(collection, function(value) {
|
|
623
|
+
if (fn(value)) {
|
|
624
|
+
result.lhs.push(value);
|
|
625
|
+
} else {
|
|
626
|
+
result.rhs.push(value);
|
|
627
|
+
}
|
|
628
|
+
});
|
|
629
|
+
return result;
|
|
630
|
+
}
|
|
631
|
+
function notime(name, fn) {
|
|
632
|
+
return fn();
|
|
633
|
+
}
|
|
634
|
+
function addBorderSegments(g) {
|
|
635
|
+
function dfs2(v) {
|
|
636
|
+
var children = g.children(v);
|
|
637
|
+
var node = g.node(v);
|
|
638
|
+
if (children.length) {
|
|
639
|
+
forEach(children, dfs2);
|
|
640
|
+
}
|
|
641
|
+
if (Object.prototype.hasOwnProperty.call(node, "minRank")) {
|
|
642
|
+
node.borderLeft = [];
|
|
643
|
+
node.borderRight = [];
|
|
644
|
+
for (var rank2 = node.minRank, maxRank2 = node.maxRank + 1; rank2 < maxRank2; ++rank2) {
|
|
645
|
+
addBorderNode(g, "borderLeft", "_bl", v, node, rank2);
|
|
646
|
+
addBorderNode(g, "borderRight", "_br", v, node, rank2);
|
|
647
|
+
}
|
|
648
|
+
}
|
|
649
|
+
}
|
|
650
|
+
forEach(g.children(), dfs2);
|
|
651
|
+
}
|
|
652
|
+
function addBorderNode(g, prop, prefix, sg, sgNode, rank2) {
|
|
653
|
+
var label = { width: 0, height: 0, rank: rank2, borderType: prop };
|
|
654
|
+
var prev = sgNode[prop][rank2 - 1];
|
|
655
|
+
var curr = addDummyNode(g, "border", label, prefix);
|
|
656
|
+
sgNode[prop][rank2] = curr;
|
|
657
|
+
g.setParent(curr, sg);
|
|
658
|
+
if (prev) {
|
|
659
|
+
g.setEdge(prev, curr, { weight: 1 });
|
|
660
|
+
}
|
|
661
|
+
}
|
|
662
|
+
function adjust(g) {
|
|
663
|
+
var rankDir = g.graph().rankdir.toLowerCase();
|
|
664
|
+
if (rankDir === "lr" || rankDir === "rl") {
|
|
665
|
+
swapWidthHeight(g);
|
|
666
|
+
}
|
|
667
|
+
}
|
|
668
|
+
function undo$1(g) {
|
|
669
|
+
var rankDir = g.graph().rankdir.toLowerCase();
|
|
670
|
+
if (rankDir === "bt" || rankDir === "rl") {
|
|
671
|
+
reverseY(g);
|
|
672
|
+
}
|
|
673
|
+
if (rankDir === "lr" || rankDir === "rl") {
|
|
674
|
+
swapXY(g);
|
|
675
|
+
swapWidthHeight(g);
|
|
676
|
+
}
|
|
677
|
+
}
|
|
678
|
+
function swapWidthHeight(g) {
|
|
679
|
+
forEach(g.nodes(), function(v) {
|
|
680
|
+
swapWidthHeightOne(g.node(v));
|
|
681
|
+
});
|
|
682
|
+
forEach(g.edges(), function(e) {
|
|
683
|
+
swapWidthHeightOne(g.edge(e));
|
|
684
|
+
});
|
|
685
|
+
}
|
|
686
|
+
function swapWidthHeightOne(attrs) {
|
|
687
|
+
var w = attrs.width;
|
|
688
|
+
attrs.width = attrs.height;
|
|
689
|
+
attrs.height = w;
|
|
690
|
+
}
|
|
691
|
+
function reverseY(g) {
|
|
692
|
+
forEach(g.nodes(), function(v) {
|
|
693
|
+
reverseYOne(g.node(v));
|
|
694
|
+
});
|
|
695
|
+
forEach(g.edges(), function(e) {
|
|
696
|
+
var edge = g.edge(e);
|
|
697
|
+
forEach(edge.points, reverseYOne);
|
|
698
|
+
if (Object.prototype.hasOwnProperty.call(edge, "y")) {
|
|
699
|
+
reverseYOne(edge);
|
|
700
|
+
}
|
|
701
|
+
});
|
|
702
|
+
}
|
|
703
|
+
function reverseYOne(attrs) {
|
|
704
|
+
attrs.y = -attrs.y;
|
|
705
|
+
}
|
|
706
|
+
function swapXY(g) {
|
|
707
|
+
forEach(g.nodes(), function(v) {
|
|
708
|
+
swapXYOne(g.node(v));
|
|
709
|
+
});
|
|
710
|
+
forEach(g.edges(), function(e) {
|
|
711
|
+
var edge = g.edge(e);
|
|
712
|
+
forEach(edge.points, swapXYOne);
|
|
713
|
+
if (Object.prototype.hasOwnProperty.call(edge, "x")) {
|
|
714
|
+
swapXYOne(edge);
|
|
715
|
+
}
|
|
716
|
+
});
|
|
717
|
+
}
|
|
718
|
+
function swapXYOne(attrs) {
|
|
719
|
+
var x = attrs.x;
|
|
720
|
+
attrs.x = attrs.y;
|
|
721
|
+
attrs.y = x;
|
|
722
|
+
}
|
|
723
|
+
function run$1(g) {
|
|
724
|
+
g.graph().dummyChains = [];
|
|
725
|
+
forEach(g.edges(), function(edge) {
|
|
726
|
+
normalizeEdge(g, edge);
|
|
727
|
+
});
|
|
728
|
+
}
|
|
729
|
+
function normalizeEdge(g, e) {
|
|
730
|
+
var v = e.v;
|
|
731
|
+
var vRank = g.node(v).rank;
|
|
732
|
+
var w = e.w;
|
|
733
|
+
var wRank = g.node(w).rank;
|
|
734
|
+
var name = e.name;
|
|
735
|
+
var edgeLabel = g.edge(e);
|
|
736
|
+
var labelRank = edgeLabel.labelRank;
|
|
737
|
+
if (wRank === vRank + 1) return;
|
|
738
|
+
g.removeEdge(e);
|
|
739
|
+
var attrs = void 0;
|
|
740
|
+
var dummy, i;
|
|
741
|
+
for (i = 0, ++vRank; vRank < wRank; ++i, ++vRank) {
|
|
742
|
+
edgeLabel.points = [];
|
|
743
|
+
attrs = {
|
|
744
|
+
width: 0,
|
|
745
|
+
height: 0,
|
|
746
|
+
edgeLabel,
|
|
747
|
+
edgeObj: e,
|
|
748
|
+
rank: vRank
|
|
749
|
+
};
|
|
750
|
+
dummy = addDummyNode(g, "edge", attrs, "_d");
|
|
751
|
+
if (vRank === labelRank) {
|
|
752
|
+
attrs.width = edgeLabel.width;
|
|
753
|
+
attrs.height = edgeLabel.height;
|
|
754
|
+
attrs.dummy = "edge-label";
|
|
755
|
+
attrs.labelpos = edgeLabel.labelpos;
|
|
756
|
+
}
|
|
757
|
+
g.setEdge(v, dummy, { weight: edgeLabel.weight }, name);
|
|
758
|
+
if (i === 0) {
|
|
759
|
+
g.graph().dummyChains.push(dummy);
|
|
760
|
+
}
|
|
761
|
+
v = dummy;
|
|
762
|
+
}
|
|
763
|
+
g.setEdge(v, w, { weight: edgeLabel.weight }, name);
|
|
764
|
+
}
|
|
765
|
+
function undo(g) {
|
|
766
|
+
forEach(g.graph().dummyChains, function(v) {
|
|
767
|
+
var node = g.node(v);
|
|
768
|
+
var origLabel = node.edgeLabel;
|
|
769
|
+
var w;
|
|
770
|
+
g.setEdge(node.edgeObj, origLabel);
|
|
771
|
+
while (node.dummy) {
|
|
772
|
+
w = g.successors(v)[0];
|
|
773
|
+
g.removeNode(v);
|
|
774
|
+
origLabel.points.push({ x: node.x, y: node.y });
|
|
775
|
+
if (node.dummy === "edge-label") {
|
|
776
|
+
origLabel.x = node.x;
|
|
777
|
+
origLabel.y = node.y;
|
|
778
|
+
origLabel.width = node.width;
|
|
779
|
+
origLabel.height = node.height;
|
|
780
|
+
}
|
|
781
|
+
v = w;
|
|
782
|
+
node = g.node(v);
|
|
783
|
+
}
|
|
784
|
+
});
|
|
785
|
+
}
|
|
786
|
+
function longestPath(g) {
|
|
787
|
+
var visited = {};
|
|
788
|
+
function dfs2(v) {
|
|
789
|
+
var label = g.node(v);
|
|
790
|
+
if (Object.prototype.hasOwnProperty.call(visited, v)) {
|
|
791
|
+
return label.rank;
|
|
792
|
+
}
|
|
793
|
+
visited[v] = true;
|
|
794
|
+
var rank2 = min(
|
|
795
|
+
map(g.outEdges(v), function(e) {
|
|
796
|
+
return dfs2(e.w) - g.edge(e).minlen;
|
|
797
|
+
})
|
|
798
|
+
);
|
|
799
|
+
if (rank2 === Number.POSITIVE_INFINITY || // return value of _.map([]) for Lodash 3
|
|
800
|
+
rank2 === void 0 || // return value of _.map([]) for Lodash 4
|
|
801
|
+
rank2 === null) {
|
|
802
|
+
rank2 = 0;
|
|
803
|
+
}
|
|
804
|
+
return label.rank = rank2;
|
|
805
|
+
}
|
|
806
|
+
forEach(g.sources(), dfs2);
|
|
807
|
+
}
|
|
808
|
+
function slack(g, e) {
|
|
809
|
+
return g.node(e.w).rank - g.node(e.v).rank - g.edge(e).minlen;
|
|
810
|
+
}
|
|
811
|
+
function feasibleTree(g) {
|
|
812
|
+
var t = new Graph({ directed: false });
|
|
813
|
+
var start = g.nodes()[0];
|
|
814
|
+
var size = g.nodeCount();
|
|
815
|
+
t.setNode(start, {});
|
|
816
|
+
var edge, delta;
|
|
817
|
+
while (tightTree(t, g) < size) {
|
|
818
|
+
edge = findMinSlackEdge(t, g);
|
|
819
|
+
delta = t.hasNode(edge.v) ? slack(g, edge) : -slack(g, edge);
|
|
820
|
+
shiftRanks(t, g, delta);
|
|
821
|
+
}
|
|
822
|
+
return t;
|
|
823
|
+
}
|
|
824
|
+
function tightTree(t, g) {
|
|
825
|
+
function dfs2(v) {
|
|
826
|
+
forEach(g.nodeEdges(v), function(e) {
|
|
827
|
+
var edgeV = e.v, w = v === edgeV ? e.w : edgeV;
|
|
828
|
+
if (!t.hasNode(w) && !slack(g, e)) {
|
|
829
|
+
t.setNode(w, {});
|
|
830
|
+
t.setEdge(v, w, {});
|
|
831
|
+
dfs2(w);
|
|
832
|
+
}
|
|
833
|
+
});
|
|
834
|
+
}
|
|
835
|
+
forEach(t.nodes(), dfs2);
|
|
836
|
+
return t.nodeCount();
|
|
837
|
+
}
|
|
838
|
+
function findMinSlackEdge(t, g) {
|
|
839
|
+
return minBy(g.edges(), function(e) {
|
|
840
|
+
if (t.hasNode(e.v) !== t.hasNode(e.w)) {
|
|
841
|
+
return slack(g, e);
|
|
842
|
+
}
|
|
843
|
+
});
|
|
844
|
+
}
|
|
845
|
+
function shiftRanks(t, g, delta) {
|
|
846
|
+
forEach(t.nodes(), function(v) {
|
|
847
|
+
g.node(v).rank += delta;
|
|
848
|
+
});
|
|
849
|
+
}
|
|
850
|
+
function CycleException() {
|
|
851
|
+
}
|
|
852
|
+
CycleException.prototype = new Error();
|
|
853
|
+
function dfs$1(g, vs, order2) {
|
|
854
|
+
if (!isArray(vs)) {
|
|
855
|
+
vs = [vs];
|
|
856
|
+
}
|
|
857
|
+
var navigation = (g.isDirected() ? g.successors : g.neighbors).bind(g);
|
|
858
|
+
var acc = [];
|
|
859
|
+
var visited = {};
|
|
860
|
+
forEach(vs, function(v) {
|
|
861
|
+
if (!g.hasNode(v)) {
|
|
862
|
+
throw new Error("Graph does not have node: " + v);
|
|
863
|
+
}
|
|
864
|
+
doDfs(g, v, order2 === "post", visited, navigation, acc);
|
|
865
|
+
});
|
|
866
|
+
return acc;
|
|
867
|
+
}
|
|
868
|
+
function doDfs(g, v, postorder2, visited, navigation, acc) {
|
|
869
|
+
if (!Object.prototype.hasOwnProperty.call(visited, v)) {
|
|
870
|
+
visited[v] = true;
|
|
871
|
+
if (!postorder2) {
|
|
872
|
+
acc.push(v);
|
|
873
|
+
}
|
|
874
|
+
forEach(navigation(v), function(w) {
|
|
875
|
+
doDfs(g, w, postorder2, visited, navigation, acc);
|
|
876
|
+
});
|
|
877
|
+
if (postorder2) {
|
|
878
|
+
acc.push(v);
|
|
879
|
+
}
|
|
880
|
+
}
|
|
881
|
+
}
|
|
882
|
+
function postorder$1(g, vs) {
|
|
883
|
+
return dfs$1(g, vs, "post");
|
|
884
|
+
}
|
|
885
|
+
function preorder(g, vs) {
|
|
886
|
+
return dfs$1(g, vs, "pre");
|
|
887
|
+
}
|
|
888
|
+
networkSimplex.initLowLimValues = initLowLimValues;
|
|
889
|
+
networkSimplex.initCutValues = initCutValues;
|
|
890
|
+
networkSimplex.calcCutValue = calcCutValue;
|
|
891
|
+
networkSimplex.leaveEdge = leaveEdge;
|
|
892
|
+
networkSimplex.enterEdge = enterEdge;
|
|
893
|
+
networkSimplex.exchangeEdges = exchangeEdges;
|
|
894
|
+
function networkSimplex(g) {
|
|
895
|
+
g = simplify(g);
|
|
896
|
+
longestPath(g);
|
|
897
|
+
var t = feasibleTree(g);
|
|
898
|
+
initLowLimValues(t);
|
|
899
|
+
initCutValues(t, g);
|
|
900
|
+
var e, f;
|
|
901
|
+
while (e = leaveEdge(t)) {
|
|
902
|
+
f = enterEdge(t, g, e);
|
|
903
|
+
exchangeEdges(t, g, e, f);
|
|
904
|
+
}
|
|
905
|
+
}
|
|
906
|
+
function initCutValues(t, g) {
|
|
907
|
+
var vs = postorder$1(t, t.nodes());
|
|
908
|
+
vs = vs.slice(0, vs.length - 1);
|
|
909
|
+
forEach(vs, function(v) {
|
|
910
|
+
assignCutValue(t, g, v);
|
|
911
|
+
});
|
|
912
|
+
}
|
|
913
|
+
function assignCutValue(t, g, child) {
|
|
914
|
+
var childLab = t.node(child);
|
|
915
|
+
var parent = childLab.parent;
|
|
916
|
+
t.edge(child, parent).cutvalue = calcCutValue(t, g, child);
|
|
917
|
+
}
|
|
918
|
+
function calcCutValue(t, g, child) {
|
|
919
|
+
var childLab = t.node(child);
|
|
920
|
+
var parent = childLab.parent;
|
|
921
|
+
var childIsTail = true;
|
|
922
|
+
var graphEdge = g.edge(child, parent);
|
|
923
|
+
var cutValue = 0;
|
|
924
|
+
if (!graphEdge) {
|
|
925
|
+
childIsTail = false;
|
|
926
|
+
graphEdge = g.edge(parent, child);
|
|
927
|
+
}
|
|
928
|
+
cutValue = graphEdge.weight;
|
|
929
|
+
forEach(g.nodeEdges(child), function(e) {
|
|
930
|
+
var isOutEdge = e.v === child, other = isOutEdge ? e.w : e.v;
|
|
931
|
+
if (other !== parent) {
|
|
932
|
+
var pointsToHead = isOutEdge === childIsTail, otherWeight = g.edge(e).weight;
|
|
933
|
+
cutValue += pointsToHead ? otherWeight : -otherWeight;
|
|
934
|
+
if (isTreeEdge(t, child, other)) {
|
|
935
|
+
var otherCutValue = t.edge(child, other).cutvalue;
|
|
936
|
+
cutValue += pointsToHead ? -otherCutValue : otherCutValue;
|
|
937
|
+
}
|
|
938
|
+
}
|
|
939
|
+
});
|
|
940
|
+
return cutValue;
|
|
941
|
+
}
|
|
942
|
+
function initLowLimValues(tree, root) {
|
|
943
|
+
if (arguments.length < 2) {
|
|
944
|
+
root = tree.nodes()[0];
|
|
945
|
+
}
|
|
946
|
+
dfsAssignLowLim(tree, {}, 1, root);
|
|
947
|
+
}
|
|
948
|
+
function dfsAssignLowLim(tree, visited, nextLim, v, parent) {
|
|
949
|
+
var low = nextLim;
|
|
950
|
+
var label = tree.node(v);
|
|
951
|
+
visited[v] = true;
|
|
952
|
+
forEach(tree.neighbors(v), function(w) {
|
|
953
|
+
if (!Object.prototype.hasOwnProperty.call(visited, w)) {
|
|
954
|
+
nextLim = dfsAssignLowLim(tree, visited, nextLim, w, v);
|
|
955
|
+
}
|
|
956
|
+
});
|
|
957
|
+
label.low = low;
|
|
958
|
+
label.lim = nextLim++;
|
|
959
|
+
if (parent) {
|
|
960
|
+
label.parent = parent;
|
|
961
|
+
} else {
|
|
962
|
+
delete label.parent;
|
|
963
|
+
}
|
|
964
|
+
return nextLim;
|
|
965
|
+
}
|
|
966
|
+
function leaveEdge(tree) {
|
|
967
|
+
return find(tree.edges(), function(e) {
|
|
968
|
+
return tree.edge(e).cutvalue < 0;
|
|
969
|
+
});
|
|
970
|
+
}
|
|
971
|
+
function enterEdge(t, g, edge) {
|
|
972
|
+
var v = edge.v;
|
|
973
|
+
var w = edge.w;
|
|
974
|
+
if (!g.hasEdge(v, w)) {
|
|
975
|
+
v = edge.w;
|
|
976
|
+
w = edge.v;
|
|
977
|
+
}
|
|
978
|
+
var vLabel = t.node(v);
|
|
979
|
+
var wLabel = t.node(w);
|
|
980
|
+
var tailLabel = vLabel;
|
|
981
|
+
var flip = false;
|
|
982
|
+
if (vLabel.lim > wLabel.lim) {
|
|
983
|
+
tailLabel = wLabel;
|
|
984
|
+
flip = true;
|
|
985
|
+
}
|
|
986
|
+
var candidates = filter(g.edges(), function(edge2) {
|
|
987
|
+
return flip === isDescendant(t, t.node(edge2.v), tailLabel) && flip !== isDescendant(t, t.node(edge2.w), tailLabel);
|
|
988
|
+
});
|
|
989
|
+
return minBy(candidates, function(edge2) {
|
|
990
|
+
return slack(g, edge2);
|
|
991
|
+
});
|
|
992
|
+
}
|
|
993
|
+
function exchangeEdges(t, g, e, f) {
|
|
994
|
+
var v = e.v;
|
|
995
|
+
var w = e.w;
|
|
996
|
+
t.removeEdge(v, w);
|
|
997
|
+
t.setEdge(f.v, f.w, {});
|
|
998
|
+
initLowLimValues(t);
|
|
999
|
+
initCutValues(t, g);
|
|
1000
|
+
updateRanks(t, g);
|
|
1001
|
+
}
|
|
1002
|
+
function updateRanks(t, g) {
|
|
1003
|
+
var root = find(t.nodes(), function(v) {
|
|
1004
|
+
return !g.node(v).parent;
|
|
1005
|
+
});
|
|
1006
|
+
var vs = preorder(t, root);
|
|
1007
|
+
vs = vs.slice(1);
|
|
1008
|
+
forEach(vs, function(v) {
|
|
1009
|
+
var parent = t.node(v).parent, edge = g.edge(v, parent), flipped = false;
|
|
1010
|
+
if (!edge) {
|
|
1011
|
+
edge = g.edge(parent, v);
|
|
1012
|
+
flipped = true;
|
|
1013
|
+
}
|
|
1014
|
+
g.node(v).rank = g.node(parent).rank + (flipped ? edge.minlen : -edge.minlen);
|
|
1015
|
+
});
|
|
1016
|
+
}
|
|
1017
|
+
function isTreeEdge(tree, u, v) {
|
|
1018
|
+
return tree.hasEdge(u, v);
|
|
1019
|
+
}
|
|
1020
|
+
function isDescendant(tree, vLabel, rootLabel) {
|
|
1021
|
+
return rootLabel.low <= vLabel.lim && vLabel.lim <= rootLabel.lim;
|
|
1022
|
+
}
|
|
1023
|
+
function rank(g) {
|
|
1024
|
+
switch (g.graph().ranker) {
|
|
1025
|
+
case "network-simplex":
|
|
1026
|
+
networkSimplexRanker(g);
|
|
1027
|
+
break;
|
|
1028
|
+
case "tight-tree":
|
|
1029
|
+
tightTreeRanker(g);
|
|
1030
|
+
break;
|
|
1031
|
+
case "longest-path":
|
|
1032
|
+
longestPathRanker(g);
|
|
1033
|
+
break;
|
|
1034
|
+
default:
|
|
1035
|
+
networkSimplexRanker(g);
|
|
1036
|
+
}
|
|
1037
|
+
}
|
|
1038
|
+
var longestPathRanker = longestPath;
|
|
1039
|
+
function tightTreeRanker(g) {
|
|
1040
|
+
longestPath(g);
|
|
1041
|
+
feasibleTree(g);
|
|
1042
|
+
}
|
|
1043
|
+
function networkSimplexRanker(g) {
|
|
1044
|
+
networkSimplex(g);
|
|
1045
|
+
}
|
|
1046
|
+
function run(g) {
|
|
1047
|
+
var root = addDummyNode(g, "root", {}, "_root");
|
|
1048
|
+
var depths = treeDepths(g);
|
|
1049
|
+
var height = max(values(depths)) - 1;
|
|
1050
|
+
var nodeSep = 2 * height + 1;
|
|
1051
|
+
g.graph().nestingRoot = root;
|
|
1052
|
+
forEach(g.edges(), function(e) {
|
|
1053
|
+
g.edge(e).minlen *= nodeSep;
|
|
1054
|
+
});
|
|
1055
|
+
var weight = sumWeights(g) + 1;
|
|
1056
|
+
forEach(g.children(), function(child) {
|
|
1057
|
+
dfs(g, root, nodeSep, weight, height, depths, child);
|
|
1058
|
+
});
|
|
1059
|
+
g.graph().nodeRankFactor = nodeSep;
|
|
1060
|
+
}
|
|
1061
|
+
function dfs(g, root, nodeSep, weight, height, depths, v) {
|
|
1062
|
+
var children = g.children(v);
|
|
1063
|
+
if (!children.length) {
|
|
1064
|
+
if (v !== root) {
|
|
1065
|
+
g.setEdge(root, v, { weight: 0, minlen: nodeSep });
|
|
1066
|
+
}
|
|
1067
|
+
return;
|
|
1068
|
+
}
|
|
1069
|
+
var top = addBorderNode$1(g, "_bt");
|
|
1070
|
+
var bottom = addBorderNode$1(g, "_bb");
|
|
1071
|
+
var label = g.node(v);
|
|
1072
|
+
g.setParent(top, v);
|
|
1073
|
+
label.borderTop = top;
|
|
1074
|
+
g.setParent(bottom, v);
|
|
1075
|
+
label.borderBottom = bottom;
|
|
1076
|
+
forEach(children, function(child) {
|
|
1077
|
+
dfs(g, root, nodeSep, weight, height, depths, child);
|
|
1078
|
+
var childNode = g.node(child);
|
|
1079
|
+
var childTop = childNode.borderTop ? childNode.borderTop : child;
|
|
1080
|
+
var childBottom = childNode.borderBottom ? childNode.borderBottom : child;
|
|
1081
|
+
var thisWeight = childNode.borderTop ? weight : 2 * weight;
|
|
1082
|
+
var minlen = childTop !== childBottom ? 1 : height - depths[v] + 1;
|
|
1083
|
+
g.setEdge(top, childTop, {
|
|
1084
|
+
weight: thisWeight,
|
|
1085
|
+
minlen,
|
|
1086
|
+
nestingEdge: true
|
|
1087
|
+
});
|
|
1088
|
+
g.setEdge(childBottom, bottom, {
|
|
1089
|
+
weight: thisWeight,
|
|
1090
|
+
minlen,
|
|
1091
|
+
nestingEdge: true
|
|
1092
|
+
});
|
|
1093
|
+
});
|
|
1094
|
+
if (!g.parent(v)) {
|
|
1095
|
+
g.setEdge(root, top, { weight: 0, minlen: height + depths[v] });
|
|
1096
|
+
}
|
|
1097
|
+
}
|
|
1098
|
+
function treeDepths(g) {
|
|
1099
|
+
var depths = {};
|
|
1100
|
+
function dfs2(v, depth) {
|
|
1101
|
+
var children = g.children(v);
|
|
1102
|
+
if (children && children.length) {
|
|
1103
|
+
forEach(children, function(child) {
|
|
1104
|
+
dfs2(child, depth + 1);
|
|
1105
|
+
});
|
|
1106
|
+
}
|
|
1107
|
+
depths[v] = depth;
|
|
1108
|
+
}
|
|
1109
|
+
forEach(g.children(), function(v) {
|
|
1110
|
+
dfs2(v, 1);
|
|
1111
|
+
});
|
|
1112
|
+
return depths;
|
|
1113
|
+
}
|
|
1114
|
+
function sumWeights(g) {
|
|
1115
|
+
return reduce(
|
|
1116
|
+
g.edges(),
|
|
1117
|
+
function(acc, e) {
|
|
1118
|
+
return acc + g.edge(e).weight;
|
|
1119
|
+
},
|
|
1120
|
+
0
|
|
1121
|
+
);
|
|
1122
|
+
}
|
|
1123
|
+
function cleanup(g) {
|
|
1124
|
+
var graphLabel = g.graph();
|
|
1125
|
+
g.removeNode(graphLabel.nestingRoot);
|
|
1126
|
+
delete graphLabel.nestingRoot;
|
|
1127
|
+
forEach(g.edges(), function(e) {
|
|
1128
|
+
var edge = g.edge(e);
|
|
1129
|
+
if (edge.nestingEdge) {
|
|
1130
|
+
g.removeEdge(e);
|
|
1131
|
+
}
|
|
1132
|
+
});
|
|
1133
|
+
}
|
|
1134
|
+
function addSubgraphConstraints(g, cg, vs) {
|
|
1135
|
+
var prev = {}, rootPrev;
|
|
1136
|
+
forEach(vs, function(v) {
|
|
1137
|
+
var child = g.parent(v), parent, prevChild;
|
|
1138
|
+
while (child) {
|
|
1139
|
+
parent = g.parent(child);
|
|
1140
|
+
if (parent) {
|
|
1141
|
+
prevChild = prev[parent];
|
|
1142
|
+
prev[parent] = child;
|
|
1143
|
+
} else {
|
|
1144
|
+
prevChild = rootPrev;
|
|
1145
|
+
rootPrev = child;
|
|
1146
|
+
}
|
|
1147
|
+
if (prevChild && prevChild !== child) {
|
|
1148
|
+
cg.setEdge(prevChild, child);
|
|
1149
|
+
return;
|
|
1150
|
+
}
|
|
1151
|
+
child = parent;
|
|
1152
|
+
}
|
|
1153
|
+
});
|
|
1154
|
+
}
|
|
1155
|
+
function buildLayerGraph(g, rank2, relationship) {
|
|
1156
|
+
var root = createRootNode(g), result = new Graph({ compound: true }).setGraph({ root }).setDefaultNodeLabel(function(v) {
|
|
1157
|
+
return g.node(v);
|
|
1158
|
+
});
|
|
1159
|
+
forEach(g.nodes(), function(v) {
|
|
1160
|
+
var node = g.node(v), parent = g.parent(v);
|
|
1161
|
+
if (node.rank === rank2 || node.minRank <= rank2 && rank2 <= node.maxRank) {
|
|
1162
|
+
result.setNode(v);
|
|
1163
|
+
result.setParent(v, parent || root);
|
|
1164
|
+
forEach(g[relationship](v), function(e) {
|
|
1165
|
+
var u = e.v === v ? e.w : e.v, edge = result.edge(u, v), weight = !isUndefined(edge) ? edge.weight : 0;
|
|
1166
|
+
result.setEdge(u, v, { weight: g.edge(e).weight + weight });
|
|
1167
|
+
});
|
|
1168
|
+
if (Object.prototype.hasOwnProperty.call(node, "minRank")) {
|
|
1169
|
+
result.setNode(v, {
|
|
1170
|
+
borderLeft: node.borderLeft[rank2],
|
|
1171
|
+
borderRight: node.borderRight[rank2]
|
|
1172
|
+
});
|
|
1173
|
+
}
|
|
1174
|
+
}
|
|
1175
|
+
});
|
|
1176
|
+
return result;
|
|
1177
|
+
}
|
|
1178
|
+
function createRootNode(g) {
|
|
1179
|
+
var v;
|
|
1180
|
+
while (g.hasNode(v = uniqueId("_root"))) ;
|
|
1181
|
+
return v;
|
|
1182
|
+
}
|
|
1183
|
+
function crossCount(g, layering) {
|
|
1184
|
+
var cc = 0;
|
|
1185
|
+
for (var i = 1; i < layering.length; ++i) {
|
|
1186
|
+
cc += twoLayerCrossCount(g, layering[i - 1], layering[i]);
|
|
1187
|
+
}
|
|
1188
|
+
return cc;
|
|
1189
|
+
}
|
|
1190
|
+
function twoLayerCrossCount(g, northLayer, southLayer) {
|
|
1191
|
+
var southPos = zipObject(
|
|
1192
|
+
southLayer,
|
|
1193
|
+
map(southLayer, function(v, i) {
|
|
1194
|
+
return i;
|
|
1195
|
+
})
|
|
1196
|
+
);
|
|
1197
|
+
var southEntries = flatten(
|
|
1198
|
+
map(northLayer, function(v) {
|
|
1199
|
+
return sortBy(
|
|
1200
|
+
map(g.outEdges(v), function(e) {
|
|
1201
|
+
return { pos: southPos[e.w], weight: g.edge(e).weight };
|
|
1202
|
+
}),
|
|
1203
|
+
"pos"
|
|
1204
|
+
);
|
|
1205
|
+
})
|
|
1206
|
+
);
|
|
1207
|
+
var firstIndex = 1;
|
|
1208
|
+
while (firstIndex < southLayer.length) firstIndex <<= 1;
|
|
1209
|
+
var treeSize = 2 * firstIndex - 1;
|
|
1210
|
+
firstIndex -= 1;
|
|
1211
|
+
var tree = map(new Array(treeSize), function() {
|
|
1212
|
+
return 0;
|
|
1213
|
+
});
|
|
1214
|
+
var cc = 0;
|
|
1215
|
+
forEach(
|
|
1216
|
+
// @ts-expect-error
|
|
1217
|
+
southEntries.forEach(function(entry) {
|
|
1218
|
+
var index = entry.pos + firstIndex;
|
|
1219
|
+
tree[index] += entry.weight;
|
|
1220
|
+
var weightSum = 0;
|
|
1221
|
+
while (index > 0) {
|
|
1222
|
+
if (index % 2) {
|
|
1223
|
+
weightSum += tree[index + 1];
|
|
1224
|
+
}
|
|
1225
|
+
index = index - 1 >> 1;
|
|
1226
|
+
tree[index] += entry.weight;
|
|
1227
|
+
}
|
|
1228
|
+
cc += entry.weight * weightSum;
|
|
1229
|
+
})
|
|
1230
|
+
);
|
|
1231
|
+
return cc;
|
|
1232
|
+
}
|
|
1233
|
+
function initOrder(g) {
|
|
1234
|
+
var visited = {};
|
|
1235
|
+
var simpleNodes = filter(g.nodes(), function(v) {
|
|
1236
|
+
return !g.children(v).length;
|
|
1237
|
+
});
|
|
1238
|
+
var maxRank2 = max(
|
|
1239
|
+
map(simpleNodes, function(v) {
|
|
1240
|
+
return g.node(v).rank;
|
|
1241
|
+
})
|
|
1242
|
+
);
|
|
1243
|
+
var layers = map(range(maxRank2 + 1), function() {
|
|
1244
|
+
return [];
|
|
1245
|
+
});
|
|
1246
|
+
function dfs2(v) {
|
|
1247
|
+
if (has(visited, v)) return;
|
|
1248
|
+
visited[v] = true;
|
|
1249
|
+
var node = g.node(v);
|
|
1250
|
+
layers[node.rank].push(v);
|
|
1251
|
+
forEach(g.successors(v), dfs2);
|
|
1252
|
+
}
|
|
1253
|
+
var orderedVs = sortBy(simpleNodes, function(v) {
|
|
1254
|
+
return g.node(v).rank;
|
|
1255
|
+
});
|
|
1256
|
+
forEach(orderedVs, dfs2);
|
|
1257
|
+
return layers;
|
|
1258
|
+
}
|
|
1259
|
+
function barycenter(g, movable) {
|
|
1260
|
+
return map(movable, function(v) {
|
|
1261
|
+
var inV = g.inEdges(v);
|
|
1262
|
+
if (!inV.length) {
|
|
1263
|
+
return { v };
|
|
1264
|
+
} else {
|
|
1265
|
+
var result = reduce(
|
|
1266
|
+
inV,
|
|
1267
|
+
function(acc, e) {
|
|
1268
|
+
var edge = g.edge(e), nodeU = g.node(e.v);
|
|
1269
|
+
return {
|
|
1270
|
+
sum: acc.sum + edge.weight * nodeU.order,
|
|
1271
|
+
weight: acc.weight + edge.weight
|
|
1272
|
+
};
|
|
1273
|
+
},
|
|
1274
|
+
{ sum: 0, weight: 0 }
|
|
1275
|
+
);
|
|
1276
|
+
return {
|
|
1277
|
+
v,
|
|
1278
|
+
barycenter: result.sum / result.weight,
|
|
1279
|
+
weight: result.weight
|
|
1280
|
+
};
|
|
1281
|
+
}
|
|
1282
|
+
});
|
|
1283
|
+
}
|
|
1284
|
+
function resolveConflicts(entries, cg) {
|
|
1285
|
+
var mappedEntries = {};
|
|
1286
|
+
forEach(entries, function(entry, i) {
|
|
1287
|
+
var tmp = mappedEntries[entry.v] = {
|
|
1288
|
+
indegree: 0,
|
|
1289
|
+
in: [],
|
|
1290
|
+
out: [],
|
|
1291
|
+
vs: [entry.v],
|
|
1292
|
+
i
|
|
1293
|
+
};
|
|
1294
|
+
if (!isUndefined(entry.barycenter)) {
|
|
1295
|
+
tmp.barycenter = entry.barycenter;
|
|
1296
|
+
tmp.weight = entry.weight;
|
|
1297
|
+
}
|
|
1298
|
+
});
|
|
1299
|
+
forEach(cg.edges(), function(e) {
|
|
1300
|
+
var entryV = mappedEntries[e.v];
|
|
1301
|
+
var entryW = mappedEntries[e.w];
|
|
1302
|
+
if (!isUndefined(entryV) && !isUndefined(entryW)) {
|
|
1303
|
+
entryW.indegree++;
|
|
1304
|
+
entryV.out.push(mappedEntries[e.w]);
|
|
1305
|
+
}
|
|
1306
|
+
});
|
|
1307
|
+
var sourceSet = filter(mappedEntries, function(entry) {
|
|
1308
|
+
return !entry.indegree;
|
|
1309
|
+
});
|
|
1310
|
+
return doResolveConflicts(sourceSet);
|
|
1311
|
+
}
|
|
1312
|
+
function doResolveConflicts(sourceSet) {
|
|
1313
|
+
var entries = [];
|
|
1314
|
+
function handleIn(vEntry) {
|
|
1315
|
+
return function(uEntry) {
|
|
1316
|
+
if (uEntry.merged) {
|
|
1317
|
+
return;
|
|
1318
|
+
}
|
|
1319
|
+
if (isUndefined(uEntry.barycenter) || isUndefined(vEntry.barycenter) || uEntry.barycenter >= vEntry.barycenter) {
|
|
1320
|
+
mergeEntries(vEntry, uEntry);
|
|
1321
|
+
}
|
|
1322
|
+
};
|
|
1323
|
+
}
|
|
1324
|
+
function handleOut(vEntry) {
|
|
1325
|
+
return function(wEntry) {
|
|
1326
|
+
wEntry["in"].push(vEntry);
|
|
1327
|
+
if (--wEntry.indegree === 0) {
|
|
1328
|
+
sourceSet.push(wEntry);
|
|
1329
|
+
}
|
|
1330
|
+
};
|
|
1331
|
+
}
|
|
1332
|
+
while (sourceSet.length) {
|
|
1333
|
+
var entry = sourceSet.pop();
|
|
1334
|
+
entries.push(entry);
|
|
1335
|
+
forEach(entry["in"].reverse(), handleIn(entry));
|
|
1336
|
+
forEach(entry.out, handleOut(entry));
|
|
1337
|
+
}
|
|
1338
|
+
return map(
|
|
1339
|
+
filter(entries, function(entry2) {
|
|
1340
|
+
return !entry2.merged;
|
|
1341
|
+
}),
|
|
1342
|
+
function(entry2) {
|
|
1343
|
+
return pick(entry2, ["vs", "i", "barycenter", "weight"]);
|
|
1344
|
+
}
|
|
1345
|
+
);
|
|
1346
|
+
}
|
|
1347
|
+
function mergeEntries(target, source) {
|
|
1348
|
+
var sum = 0;
|
|
1349
|
+
var weight = 0;
|
|
1350
|
+
if (target.weight) {
|
|
1351
|
+
sum += target.barycenter * target.weight;
|
|
1352
|
+
weight += target.weight;
|
|
1353
|
+
}
|
|
1354
|
+
if (source.weight) {
|
|
1355
|
+
sum += source.barycenter * source.weight;
|
|
1356
|
+
weight += source.weight;
|
|
1357
|
+
}
|
|
1358
|
+
target.vs = source.vs.concat(target.vs);
|
|
1359
|
+
target.barycenter = sum / weight;
|
|
1360
|
+
target.weight = weight;
|
|
1361
|
+
target.i = Math.min(source.i, target.i);
|
|
1362
|
+
source.merged = true;
|
|
1363
|
+
}
|
|
1364
|
+
function sort(entries, biasRight) {
|
|
1365
|
+
var parts = partition(entries, function(entry) {
|
|
1366
|
+
return Object.prototype.hasOwnProperty.call(entry, "barycenter");
|
|
1367
|
+
});
|
|
1368
|
+
var sortable = parts.lhs, unsortable = sortBy(parts.rhs, function(entry) {
|
|
1369
|
+
return -entry.i;
|
|
1370
|
+
}), vs = [], sum = 0, weight = 0, vsIndex = 0;
|
|
1371
|
+
sortable.sort(compareWithBias(!!biasRight));
|
|
1372
|
+
vsIndex = consumeUnsortable(vs, unsortable, vsIndex);
|
|
1373
|
+
forEach(sortable, function(entry) {
|
|
1374
|
+
vsIndex += entry.vs.length;
|
|
1375
|
+
vs.push(entry.vs);
|
|
1376
|
+
sum += entry.barycenter * entry.weight;
|
|
1377
|
+
weight += entry.weight;
|
|
1378
|
+
vsIndex = consumeUnsortable(vs, unsortable, vsIndex);
|
|
1379
|
+
});
|
|
1380
|
+
var result = { vs: flatten(vs) };
|
|
1381
|
+
if (weight) {
|
|
1382
|
+
result.barycenter = sum / weight;
|
|
1383
|
+
result.weight = weight;
|
|
1384
|
+
}
|
|
1385
|
+
return result;
|
|
1386
|
+
}
|
|
1387
|
+
function consumeUnsortable(vs, unsortable, index) {
|
|
1388
|
+
var last$1;
|
|
1389
|
+
while (unsortable.length && (last$1 = last(unsortable)).i <= index) {
|
|
1390
|
+
unsortable.pop();
|
|
1391
|
+
vs.push(last$1.vs);
|
|
1392
|
+
index++;
|
|
1393
|
+
}
|
|
1394
|
+
return index;
|
|
1395
|
+
}
|
|
1396
|
+
function compareWithBias(bias) {
|
|
1397
|
+
return function(entryV, entryW) {
|
|
1398
|
+
if (entryV.barycenter < entryW.barycenter) {
|
|
1399
|
+
return -1;
|
|
1400
|
+
} else if (entryV.barycenter > entryW.barycenter) {
|
|
1401
|
+
return 1;
|
|
1402
|
+
}
|
|
1403
|
+
return !bias ? entryV.i - entryW.i : entryW.i - entryV.i;
|
|
1404
|
+
};
|
|
1405
|
+
}
|
|
1406
|
+
function sortSubgraph(g, v, cg, biasRight) {
|
|
1407
|
+
var movable = g.children(v);
|
|
1408
|
+
var node = g.node(v);
|
|
1409
|
+
var bl = node ? node.borderLeft : void 0;
|
|
1410
|
+
var br = node ? node.borderRight : void 0;
|
|
1411
|
+
var subgraphs = {};
|
|
1412
|
+
if (bl) {
|
|
1413
|
+
movable = filter(movable, function(w) {
|
|
1414
|
+
return w !== bl && w !== br;
|
|
1415
|
+
});
|
|
1416
|
+
}
|
|
1417
|
+
var barycenters = barycenter(g, movable);
|
|
1418
|
+
forEach(barycenters, function(entry) {
|
|
1419
|
+
if (g.children(entry.v).length) {
|
|
1420
|
+
var subgraphResult = sortSubgraph(g, entry.v, cg, biasRight);
|
|
1421
|
+
subgraphs[entry.v] = subgraphResult;
|
|
1422
|
+
if (Object.prototype.hasOwnProperty.call(subgraphResult, "barycenter")) {
|
|
1423
|
+
mergeBarycenters(entry, subgraphResult);
|
|
1424
|
+
}
|
|
1425
|
+
}
|
|
1426
|
+
});
|
|
1427
|
+
var entries = resolveConflicts(barycenters, cg);
|
|
1428
|
+
expandSubgraphs(entries, subgraphs);
|
|
1429
|
+
var result = sort(entries, biasRight);
|
|
1430
|
+
if (bl) {
|
|
1431
|
+
result.vs = flatten([bl, result.vs, br]);
|
|
1432
|
+
if (g.predecessors(bl).length) {
|
|
1433
|
+
var blPred = g.node(g.predecessors(bl)[0]), brPred = g.node(g.predecessors(br)[0]);
|
|
1434
|
+
if (!Object.prototype.hasOwnProperty.call(result, "barycenter")) {
|
|
1435
|
+
result.barycenter = 0;
|
|
1436
|
+
result.weight = 0;
|
|
1437
|
+
}
|
|
1438
|
+
result.barycenter = (result.barycenter * result.weight + blPred.order + brPred.order) / (result.weight + 2);
|
|
1439
|
+
result.weight += 2;
|
|
1440
|
+
}
|
|
1441
|
+
}
|
|
1442
|
+
return result;
|
|
1443
|
+
}
|
|
1444
|
+
function expandSubgraphs(entries, subgraphs) {
|
|
1445
|
+
forEach(entries, function(entry) {
|
|
1446
|
+
entry.vs = flatten(
|
|
1447
|
+
entry.vs.map(function(v) {
|
|
1448
|
+
if (subgraphs[v]) {
|
|
1449
|
+
return subgraphs[v].vs;
|
|
1450
|
+
}
|
|
1451
|
+
return v;
|
|
1452
|
+
})
|
|
1453
|
+
);
|
|
1454
|
+
});
|
|
1455
|
+
}
|
|
1456
|
+
function mergeBarycenters(target, other) {
|
|
1457
|
+
if (!isUndefined(target.barycenter)) {
|
|
1458
|
+
target.barycenter = (target.barycenter * target.weight + other.barycenter * other.weight) / (target.weight + other.weight);
|
|
1459
|
+
target.weight += other.weight;
|
|
1460
|
+
} else {
|
|
1461
|
+
target.barycenter = other.barycenter;
|
|
1462
|
+
target.weight = other.weight;
|
|
1463
|
+
}
|
|
1464
|
+
}
|
|
1465
|
+
function order(g) {
|
|
1466
|
+
var maxRank$1 = maxRank(g), downLayerGraphs = buildLayerGraphs(g, range(1, maxRank$1 + 1), "inEdges"), upLayerGraphs = buildLayerGraphs(g, range(maxRank$1 - 1, -1, -1), "outEdges");
|
|
1467
|
+
var layering = initOrder(g);
|
|
1468
|
+
assignOrder(g, layering);
|
|
1469
|
+
var bestCC = Number.POSITIVE_INFINITY, best;
|
|
1470
|
+
for (var i = 0, lastBest = 0; lastBest < 4; ++i, ++lastBest) {
|
|
1471
|
+
sweepLayerGraphs(i % 2 ? downLayerGraphs : upLayerGraphs, i % 4 >= 2);
|
|
1472
|
+
layering = buildLayerMatrix(g);
|
|
1473
|
+
var cc = crossCount(g, layering);
|
|
1474
|
+
if (cc < bestCC) {
|
|
1475
|
+
lastBest = 0;
|
|
1476
|
+
best = cloneDeep(layering);
|
|
1477
|
+
bestCC = cc;
|
|
1478
|
+
}
|
|
1479
|
+
}
|
|
1480
|
+
assignOrder(g, best);
|
|
1481
|
+
}
|
|
1482
|
+
function buildLayerGraphs(g, ranks, relationship) {
|
|
1483
|
+
return map(ranks, function(rank2) {
|
|
1484
|
+
return buildLayerGraph(g, rank2, relationship);
|
|
1485
|
+
});
|
|
1486
|
+
}
|
|
1487
|
+
function sweepLayerGraphs(layerGraphs, biasRight) {
|
|
1488
|
+
var cg = new Graph();
|
|
1489
|
+
forEach(layerGraphs, function(lg) {
|
|
1490
|
+
var root = lg.graph().root;
|
|
1491
|
+
var sorted = sortSubgraph(lg, root, cg, biasRight);
|
|
1492
|
+
forEach(sorted.vs, function(v, i) {
|
|
1493
|
+
lg.node(v).order = i;
|
|
1494
|
+
});
|
|
1495
|
+
addSubgraphConstraints(lg, cg, sorted.vs);
|
|
1496
|
+
});
|
|
1497
|
+
}
|
|
1498
|
+
function assignOrder(g, layering) {
|
|
1499
|
+
forEach(layering, function(layer) {
|
|
1500
|
+
forEach(layer, function(v, i) {
|
|
1501
|
+
g.node(v).order = i;
|
|
1502
|
+
});
|
|
1503
|
+
});
|
|
1504
|
+
}
|
|
1505
|
+
function parentDummyChains(g) {
|
|
1506
|
+
var postorderNums = postorder(g);
|
|
1507
|
+
forEach(g.graph().dummyChains, function(v) {
|
|
1508
|
+
var node = g.node(v);
|
|
1509
|
+
var edgeObj = node.edgeObj;
|
|
1510
|
+
var pathData = findPath(g, postorderNums, edgeObj.v, edgeObj.w);
|
|
1511
|
+
var path = pathData.path;
|
|
1512
|
+
var lca = pathData.lca;
|
|
1513
|
+
var pathIdx = 0;
|
|
1514
|
+
var pathV = path[pathIdx];
|
|
1515
|
+
var ascending = true;
|
|
1516
|
+
while (v !== edgeObj.w) {
|
|
1517
|
+
node = g.node(v);
|
|
1518
|
+
if (ascending) {
|
|
1519
|
+
while ((pathV = path[pathIdx]) !== lca && g.node(pathV).maxRank < node.rank) {
|
|
1520
|
+
pathIdx++;
|
|
1521
|
+
}
|
|
1522
|
+
if (pathV === lca) {
|
|
1523
|
+
ascending = false;
|
|
1524
|
+
}
|
|
1525
|
+
}
|
|
1526
|
+
if (!ascending) {
|
|
1527
|
+
while (pathIdx < path.length - 1 && g.node(pathV = path[pathIdx + 1]).minRank <= node.rank) {
|
|
1528
|
+
pathIdx++;
|
|
1529
|
+
}
|
|
1530
|
+
pathV = path[pathIdx];
|
|
1531
|
+
}
|
|
1532
|
+
g.setParent(v, pathV);
|
|
1533
|
+
v = g.successors(v)[0];
|
|
1534
|
+
}
|
|
1535
|
+
});
|
|
1536
|
+
}
|
|
1537
|
+
function findPath(g, postorderNums, v, w) {
|
|
1538
|
+
var vPath = [];
|
|
1539
|
+
var wPath = [];
|
|
1540
|
+
var low = Math.min(postorderNums[v].low, postorderNums[w].low);
|
|
1541
|
+
var lim = Math.max(postorderNums[v].lim, postorderNums[w].lim);
|
|
1542
|
+
var parent;
|
|
1543
|
+
var lca;
|
|
1544
|
+
parent = v;
|
|
1545
|
+
do {
|
|
1546
|
+
parent = g.parent(parent);
|
|
1547
|
+
vPath.push(parent);
|
|
1548
|
+
} while (parent && (postorderNums[parent].low > low || lim > postorderNums[parent].lim));
|
|
1549
|
+
lca = parent;
|
|
1550
|
+
parent = w;
|
|
1551
|
+
while ((parent = g.parent(parent)) !== lca) {
|
|
1552
|
+
wPath.push(parent);
|
|
1553
|
+
}
|
|
1554
|
+
return { path: vPath.concat(wPath.reverse()), lca };
|
|
1555
|
+
}
|
|
1556
|
+
function postorder(g) {
|
|
1557
|
+
var result = {};
|
|
1558
|
+
var lim = 0;
|
|
1559
|
+
function dfs2(v) {
|
|
1560
|
+
var low = lim;
|
|
1561
|
+
forEach(g.children(v), dfs2);
|
|
1562
|
+
result[v] = { low, lim: lim++ };
|
|
1563
|
+
}
|
|
1564
|
+
forEach(g.children(), dfs2);
|
|
1565
|
+
return result;
|
|
1566
|
+
}
|
|
1567
|
+
function findType1Conflicts(g, layering) {
|
|
1568
|
+
var conflicts = {};
|
|
1569
|
+
function visitLayer(prevLayer, layer) {
|
|
1570
|
+
var k0 = 0, scanPos = 0, prevLayerLength = prevLayer.length, lastNode = last(layer);
|
|
1571
|
+
forEach(layer, function(v, i) {
|
|
1572
|
+
var w = findOtherInnerSegmentNode(g, v), k1 = w ? g.node(w).order : prevLayerLength;
|
|
1573
|
+
if (w || v === lastNode) {
|
|
1574
|
+
forEach(layer.slice(scanPos, i + 1), function(scanNode) {
|
|
1575
|
+
forEach(g.predecessors(scanNode), function(u) {
|
|
1576
|
+
var uLabel = g.node(u), uPos = uLabel.order;
|
|
1577
|
+
if ((uPos < k0 || k1 < uPos) && !(uLabel.dummy && g.node(scanNode).dummy)) {
|
|
1578
|
+
addConflict(conflicts, u, scanNode);
|
|
1579
|
+
}
|
|
1580
|
+
});
|
|
1581
|
+
});
|
|
1582
|
+
scanPos = i + 1;
|
|
1583
|
+
k0 = k1;
|
|
1584
|
+
}
|
|
1585
|
+
});
|
|
1586
|
+
return layer;
|
|
1587
|
+
}
|
|
1588
|
+
reduce(layering, visitLayer);
|
|
1589
|
+
return conflicts;
|
|
1590
|
+
}
|
|
1591
|
+
function findType2Conflicts(g, layering) {
|
|
1592
|
+
var conflicts = {};
|
|
1593
|
+
function scan(south, southPos, southEnd, prevNorthBorder, nextNorthBorder) {
|
|
1594
|
+
var v;
|
|
1595
|
+
forEach(range(southPos, southEnd), function(i) {
|
|
1596
|
+
v = south[i];
|
|
1597
|
+
if (g.node(v).dummy) {
|
|
1598
|
+
forEach(g.predecessors(v), function(u) {
|
|
1599
|
+
var uNode = g.node(u);
|
|
1600
|
+
if (uNode.dummy && (uNode.order < prevNorthBorder || uNode.order > nextNorthBorder)) {
|
|
1601
|
+
addConflict(conflicts, u, v);
|
|
1602
|
+
}
|
|
1603
|
+
});
|
|
1604
|
+
}
|
|
1605
|
+
});
|
|
1606
|
+
}
|
|
1607
|
+
function visitLayer(north, south) {
|
|
1608
|
+
var prevNorthPos = -1, nextNorthPos, southPos = 0;
|
|
1609
|
+
forEach(south, function(v, southLookahead) {
|
|
1610
|
+
if (g.node(v).dummy === "border") {
|
|
1611
|
+
var predecessors = g.predecessors(v);
|
|
1612
|
+
if (predecessors.length) {
|
|
1613
|
+
nextNorthPos = g.node(predecessors[0]).order;
|
|
1614
|
+
scan(south, southPos, southLookahead, prevNorthPos, nextNorthPos);
|
|
1615
|
+
southPos = southLookahead;
|
|
1616
|
+
prevNorthPos = nextNorthPos;
|
|
1617
|
+
}
|
|
1618
|
+
}
|
|
1619
|
+
scan(south, southPos, south.length, nextNorthPos, north.length);
|
|
1620
|
+
});
|
|
1621
|
+
return south;
|
|
1622
|
+
}
|
|
1623
|
+
reduce(layering, visitLayer);
|
|
1624
|
+
return conflicts;
|
|
1625
|
+
}
|
|
1626
|
+
function findOtherInnerSegmentNode(g, v) {
|
|
1627
|
+
if (g.node(v).dummy) {
|
|
1628
|
+
return find(g.predecessors(v), function(u) {
|
|
1629
|
+
return g.node(u).dummy;
|
|
1630
|
+
});
|
|
1631
|
+
}
|
|
1632
|
+
}
|
|
1633
|
+
function addConflict(conflicts, v, w) {
|
|
1634
|
+
if (v > w) {
|
|
1635
|
+
var tmp = v;
|
|
1636
|
+
v = w;
|
|
1637
|
+
w = tmp;
|
|
1638
|
+
}
|
|
1639
|
+
if (!Object.prototype.hasOwnProperty.call(conflicts, v)) {
|
|
1640
|
+
Object.defineProperty(conflicts, v, {
|
|
1641
|
+
enumerable: true,
|
|
1642
|
+
configurable: true,
|
|
1643
|
+
value: {},
|
|
1644
|
+
writable: true
|
|
1645
|
+
});
|
|
1646
|
+
}
|
|
1647
|
+
var conflictsV = conflicts[v];
|
|
1648
|
+
Object.defineProperty(conflictsV, w, {
|
|
1649
|
+
enumerable: true,
|
|
1650
|
+
configurable: true,
|
|
1651
|
+
value: true,
|
|
1652
|
+
writable: true
|
|
1653
|
+
});
|
|
1654
|
+
}
|
|
1655
|
+
function hasConflict(conflicts, v, w) {
|
|
1656
|
+
if (v > w) {
|
|
1657
|
+
var tmp = v;
|
|
1658
|
+
v = w;
|
|
1659
|
+
w = tmp;
|
|
1660
|
+
}
|
|
1661
|
+
return !!conflicts[v] && Object.prototype.hasOwnProperty.call(conflicts[v], w);
|
|
1662
|
+
}
|
|
1663
|
+
function verticalAlignment(g, layering, conflicts, neighborFn) {
|
|
1664
|
+
var root = {}, align = {}, pos = {};
|
|
1665
|
+
forEach(layering, function(layer) {
|
|
1666
|
+
forEach(layer, function(v, order2) {
|
|
1667
|
+
root[v] = v;
|
|
1668
|
+
align[v] = v;
|
|
1669
|
+
pos[v] = order2;
|
|
1670
|
+
});
|
|
1671
|
+
});
|
|
1672
|
+
forEach(layering, function(layer) {
|
|
1673
|
+
var prevIdx = -1;
|
|
1674
|
+
forEach(layer, function(v) {
|
|
1675
|
+
var ws = neighborFn(v);
|
|
1676
|
+
if (ws.length) {
|
|
1677
|
+
ws = sortBy(ws, function(w2) {
|
|
1678
|
+
return pos[w2];
|
|
1679
|
+
});
|
|
1680
|
+
var mp = (ws.length - 1) / 2;
|
|
1681
|
+
for (var i = Math.floor(mp), il = Math.ceil(mp); i <= il; ++i) {
|
|
1682
|
+
var w = ws[i];
|
|
1683
|
+
if (align[v] === v && prevIdx < pos[w] && !hasConflict(conflicts, v, w)) {
|
|
1684
|
+
align[w] = v;
|
|
1685
|
+
align[v] = root[v] = root[w];
|
|
1686
|
+
prevIdx = pos[w];
|
|
1687
|
+
}
|
|
1688
|
+
}
|
|
1689
|
+
}
|
|
1690
|
+
});
|
|
1691
|
+
});
|
|
1692
|
+
return { root, align };
|
|
1693
|
+
}
|
|
1694
|
+
function horizontalCompaction(g, layering, root, align, reverseSep) {
|
|
1695
|
+
var xs = {}, blockG = buildBlockGraph(g, layering, root, reverseSep), borderType = reverseSep ? "borderLeft" : "borderRight";
|
|
1696
|
+
function iterate(setXsFunc, nextNodesFunc) {
|
|
1697
|
+
var stack = blockG.nodes();
|
|
1698
|
+
var elem = stack.pop();
|
|
1699
|
+
var visited = {};
|
|
1700
|
+
while (elem) {
|
|
1701
|
+
if (visited[elem]) {
|
|
1702
|
+
setXsFunc(elem);
|
|
1703
|
+
} else {
|
|
1704
|
+
visited[elem] = true;
|
|
1705
|
+
stack.push(elem);
|
|
1706
|
+
stack = stack.concat(nextNodesFunc(elem));
|
|
1707
|
+
}
|
|
1708
|
+
elem = stack.pop();
|
|
1709
|
+
}
|
|
1710
|
+
}
|
|
1711
|
+
function pass1(elem) {
|
|
1712
|
+
xs[elem] = blockG.inEdges(elem).reduce(function(acc, e) {
|
|
1713
|
+
return Math.max(acc, xs[e.v] + blockG.edge(e));
|
|
1714
|
+
}, 0);
|
|
1715
|
+
}
|
|
1716
|
+
function pass2(elem) {
|
|
1717
|
+
var min2 = blockG.outEdges(elem).reduce(function(acc, e) {
|
|
1718
|
+
return Math.min(acc, xs[e.w] - blockG.edge(e));
|
|
1719
|
+
}, Number.POSITIVE_INFINITY);
|
|
1720
|
+
var node = g.node(elem);
|
|
1721
|
+
if (min2 !== Number.POSITIVE_INFINITY && node.borderType !== borderType) {
|
|
1722
|
+
xs[elem] = Math.max(xs[elem], min2);
|
|
1723
|
+
}
|
|
1724
|
+
}
|
|
1725
|
+
iterate(pass1, blockG.predecessors.bind(blockG));
|
|
1726
|
+
iterate(pass2, blockG.successors.bind(blockG));
|
|
1727
|
+
forEach(align, function(v) {
|
|
1728
|
+
xs[v] = xs[root[v]];
|
|
1729
|
+
});
|
|
1730
|
+
return xs;
|
|
1731
|
+
}
|
|
1732
|
+
function buildBlockGraph(g, layering, root, reverseSep) {
|
|
1733
|
+
var blockGraph = new Graph(), graphLabel = g.graph(), sepFn = sep(graphLabel.nodesep, graphLabel.edgesep, reverseSep);
|
|
1734
|
+
forEach(layering, function(layer) {
|
|
1735
|
+
var u;
|
|
1736
|
+
forEach(layer, function(v) {
|
|
1737
|
+
var vRoot = root[v];
|
|
1738
|
+
blockGraph.setNode(vRoot);
|
|
1739
|
+
if (u) {
|
|
1740
|
+
var uRoot = root[u], prevMax = blockGraph.edge(uRoot, vRoot);
|
|
1741
|
+
blockGraph.setEdge(uRoot, vRoot, Math.max(sepFn(g, v, u), prevMax || 0));
|
|
1742
|
+
}
|
|
1743
|
+
u = v;
|
|
1744
|
+
});
|
|
1745
|
+
});
|
|
1746
|
+
return blockGraph;
|
|
1747
|
+
}
|
|
1748
|
+
function findSmallestWidthAlignment(g, xss) {
|
|
1749
|
+
return minBy(values(xss), function(xs) {
|
|
1750
|
+
var max2 = Number.NEGATIVE_INFINITY;
|
|
1751
|
+
var min2 = Number.POSITIVE_INFINITY;
|
|
1752
|
+
forIn(xs, function(x, v) {
|
|
1753
|
+
var halfWidth = width(g, v) / 2;
|
|
1754
|
+
max2 = Math.max(x + halfWidth, max2);
|
|
1755
|
+
min2 = Math.min(x - halfWidth, min2);
|
|
1756
|
+
});
|
|
1757
|
+
return max2 - min2;
|
|
1758
|
+
});
|
|
1759
|
+
}
|
|
1760
|
+
function alignCoordinates(xss, alignTo) {
|
|
1761
|
+
var alignToVals = values(alignTo), alignToMin = min(alignToVals), alignToMax = max(alignToVals);
|
|
1762
|
+
forEach(["u", "d"], function(vert) {
|
|
1763
|
+
forEach(["l", "r"], function(horiz) {
|
|
1764
|
+
var alignment = vert + horiz, xs = xss[alignment], delta;
|
|
1765
|
+
if (xs === alignTo) return;
|
|
1766
|
+
var xsVals = values(xs);
|
|
1767
|
+
delta = horiz === "l" ? alignToMin - min(xsVals) : alignToMax - max(xsVals);
|
|
1768
|
+
if (delta) {
|
|
1769
|
+
xss[alignment] = mapValues(xs, function(x) {
|
|
1770
|
+
return x + delta;
|
|
1771
|
+
});
|
|
1772
|
+
}
|
|
1773
|
+
});
|
|
1774
|
+
});
|
|
1775
|
+
}
|
|
1776
|
+
function balance(xss, align) {
|
|
1777
|
+
return mapValues(xss.ul, function(ignore, v) {
|
|
1778
|
+
if (align) {
|
|
1779
|
+
return xss[align.toLowerCase()][v];
|
|
1780
|
+
} else {
|
|
1781
|
+
var xs = sortBy(map(xss, v));
|
|
1782
|
+
return (xs[1] + xs[2]) / 2;
|
|
1783
|
+
}
|
|
1784
|
+
});
|
|
1785
|
+
}
|
|
1786
|
+
function positionX(g) {
|
|
1787
|
+
var layering = buildLayerMatrix(g);
|
|
1788
|
+
var conflicts = merge(findType1Conflicts(g, layering), findType2Conflicts(g, layering));
|
|
1789
|
+
var xss = {};
|
|
1790
|
+
var adjustedLayering;
|
|
1791
|
+
forEach(["u", "d"], function(vert) {
|
|
1792
|
+
adjustedLayering = vert === "u" ? layering : values(layering).reverse();
|
|
1793
|
+
forEach(["l", "r"], function(horiz) {
|
|
1794
|
+
if (horiz === "r") {
|
|
1795
|
+
adjustedLayering = map(adjustedLayering, function(inner) {
|
|
1796
|
+
return values(inner).reverse();
|
|
1797
|
+
});
|
|
1798
|
+
}
|
|
1799
|
+
var neighborFn = (vert === "u" ? g.predecessors : g.successors).bind(g);
|
|
1800
|
+
var align = verticalAlignment(g, adjustedLayering, conflicts, neighborFn);
|
|
1801
|
+
var xs = horizontalCompaction(g, adjustedLayering, align.root, align.align, horiz === "r");
|
|
1802
|
+
if (horiz === "r") {
|
|
1803
|
+
xs = mapValues(xs, function(x) {
|
|
1804
|
+
return -x;
|
|
1805
|
+
});
|
|
1806
|
+
}
|
|
1807
|
+
xss[vert + horiz] = xs;
|
|
1808
|
+
});
|
|
1809
|
+
});
|
|
1810
|
+
var smallestWidth = findSmallestWidthAlignment(g, xss);
|
|
1811
|
+
alignCoordinates(xss, smallestWidth);
|
|
1812
|
+
return balance(xss, g.graph().align);
|
|
1813
|
+
}
|
|
1814
|
+
function sep(nodeSep, edgeSep, reverseSep) {
|
|
1815
|
+
return function(g, v, w) {
|
|
1816
|
+
var vLabel = g.node(v);
|
|
1817
|
+
var wLabel = g.node(w);
|
|
1818
|
+
var sum = 0;
|
|
1819
|
+
var delta;
|
|
1820
|
+
sum += vLabel.width / 2;
|
|
1821
|
+
if (Object.prototype.hasOwnProperty.call(vLabel, "labelpos")) {
|
|
1822
|
+
switch (vLabel.labelpos.toLowerCase()) {
|
|
1823
|
+
case "l":
|
|
1824
|
+
delta = -vLabel.width / 2;
|
|
1825
|
+
break;
|
|
1826
|
+
case "r":
|
|
1827
|
+
delta = vLabel.width / 2;
|
|
1828
|
+
break;
|
|
1829
|
+
}
|
|
1830
|
+
}
|
|
1831
|
+
if (delta) {
|
|
1832
|
+
sum += reverseSep ? delta : -delta;
|
|
1833
|
+
}
|
|
1834
|
+
delta = 0;
|
|
1835
|
+
sum += (vLabel.dummy ? edgeSep : nodeSep) / 2;
|
|
1836
|
+
sum += (wLabel.dummy ? edgeSep : nodeSep) / 2;
|
|
1837
|
+
sum += wLabel.width / 2;
|
|
1838
|
+
if (Object.prototype.hasOwnProperty.call(wLabel, "labelpos")) {
|
|
1839
|
+
switch (wLabel.labelpos.toLowerCase()) {
|
|
1840
|
+
case "l":
|
|
1841
|
+
delta = wLabel.width / 2;
|
|
1842
|
+
break;
|
|
1843
|
+
case "r":
|
|
1844
|
+
delta = -wLabel.width / 2;
|
|
1845
|
+
break;
|
|
1846
|
+
}
|
|
1847
|
+
}
|
|
1848
|
+
if (delta) {
|
|
1849
|
+
sum += reverseSep ? delta : -delta;
|
|
1850
|
+
}
|
|
1851
|
+
delta = 0;
|
|
1852
|
+
return sum;
|
|
1853
|
+
};
|
|
1854
|
+
}
|
|
1855
|
+
function width(g, v) {
|
|
1856
|
+
return g.node(v).width;
|
|
1857
|
+
}
|
|
1858
|
+
function position(g) {
|
|
1859
|
+
g = asNonCompoundGraph(g);
|
|
1860
|
+
positionY(g);
|
|
1861
|
+
forOwn(positionX(g), function(x, v) {
|
|
1862
|
+
g.node(v).x = x;
|
|
1863
|
+
});
|
|
1864
|
+
}
|
|
1865
|
+
function positionY(g) {
|
|
1866
|
+
var layering = buildLayerMatrix(g);
|
|
1867
|
+
var rankSep = g.graph().ranksep;
|
|
1868
|
+
var prevY = 0;
|
|
1869
|
+
forEach(layering, function(layer) {
|
|
1870
|
+
var maxHeight = max(
|
|
1871
|
+
map(layer, function(v) {
|
|
1872
|
+
return g.node(v).height;
|
|
1873
|
+
})
|
|
1874
|
+
);
|
|
1875
|
+
forEach(layer, function(v) {
|
|
1876
|
+
g.node(v).y = prevY + maxHeight / 2;
|
|
1877
|
+
});
|
|
1878
|
+
prevY += maxHeight + rankSep;
|
|
1879
|
+
});
|
|
1880
|
+
}
|
|
1881
|
+
function layout(g, opts) {
|
|
1882
|
+
var time = notime;
|
|
1883
|
+
time("layout", () => {
|
|
1884
|
+
var layoutGraph = time(" buildLayoutGraph", () => buildLayoutGraph(g));
|
|
1885
|
+
time(" runLayout", () => runLayout(layoutGraph, time));
|
|
1886
|
+
time(" updateInputGraph", () => updateInputGraph(g, layoutGraph));
|
|
1887
|
+
});
|
|
1888
|
+
}
|
|
1889
|
+
function runLayout(g, time) {
|
|
1890
|
+
time(" makeSpaceForEdgeLabels", () => makeSpaceForEdgeLabels(g));
|
|
1891
|
+
time(" removeSelfEdges", () => removeSelfEdges(g));
|
|
1892
|
+
time(" acyclic", () => run$2(g));
|
|
1893
|
+
time(" nestingGraph.run", () => run(g));
|
|
1894
|
+
time(" rank", () => rank(asNonCompoundGraph(g)));
|
|
1895
|
+
time(" injectEdgeLabelProxies", () => injectEdgeLabelProxies(g));
|
|
1896
|
+
time(" removeEmptyRanks", () => removeEmptyRanks(g));
|
|
1897
|
+
time(" nestingGraph.cleanup", () => cleanup(g));
|
|
1898
|
+
time(" normalizeRanks", () => normalizeRanks(g));
|
|
1899
|
+
time(" assignRankMinMax", () => assignRankMinMax(g));
|
|
1900
|
+
time(" removeEdgeLabelProxies", () => removeEdgeLabelProxies(g));
|
|
1901
|
+
time(" normalize.run", () => run$1(g));
|
|
1902
|
+
time(" parentDummyChains", () => parentDummyChains(g));
|
|
1903
|
+
time(" addBorderSegments", () => addBorderSegments(g));
|
|
1904
|
+
time(" order", () => order(g));
|
|
1905
|
+
time(" insertSelfEdges", () => insertSelfEdges(g));
|
|
1906
|
+
time(" adjustCoordinateSystem", () => adjust(g));
|
|
1907
|
+
time(" position", () => position(g));
|
|
1908
|
+
time(" positionSelfEdges", () => positionSelfEdges(g));
|
|
1909
|
+
time(" removeBorderNodes", () => removeBorderNodes(g));
|
|
1910
|
+
time(" normalize.undo", () => undo(g));
|
|
1911
|
+
time(" fixupEdgeLabelCoords", () => fixupEdgeLabelCoords(g));
|
|
1912
|
+
time(" undoCoordinateSystem", () => undo$1(g));
|
|
1913
|
+
time(" translateGraph", () => translateGraph(g));
|
|
1914
|
+
time(" assignNodeIntersects", () => assignNodeIntersects(g));
|
|
1915
|
+
time(" reversePoints", () => reversePointsForReversedEdges(g));
|
|
1916
|
+
time(" acyclic.undo", () => undo$2(g));
|
|
1917
|
+
}
|
|
1918
|
+
function updateInputGraph(inputGraph, layoutGraph) {
|
|
1919
|
+
forEach(inputGraph.nodes(), function(v) {
|
|
1920
|
+
var inputLabel = inputGraph.node(v);
|
|
1921
|
+
var layoutLabel = layoutGraph.node(v);
|
|
1922
|
+
if (inputLabel) {
|
|
1923
|
+
inputLabel.x = layoutLabel.x;
|
|
1924
|
+
inputLabel.y = layoutLabel.y;
|
|
1925
|
+
if (layoutGraph.children(v).length) {
|
|
1926
|
+
inputLabel.width = layoutLabel.width;
|
|
1927
|
+
inputLabel.height = layoutLabel.height;
|
|
1928
|
+
}
|
|
1929
|
+
}
|
|
1930
|
+
});
|
|
1931
|
+
forEach(inputGraph.edges(), function(e) {
|
|
1932
|
+
var inputLabel = inputGraph.edge(e);
|
|
1933
|
+
var layoutLabel = layoutGraph.edge(e);
|
|
1934
|
+
inputLabel.points = layoutLabel.points;
|
|
1935
|
+
if (Object.prototype.hasOwnProperty.call(layoutLabel, "x")) {
|
|
1936
|
+
inputLabel.x = layoutLabel.x;
|
|
1937
|
+
inputLabel.y = layoutLabel.y;
|
|
1938
|
+
}
|
|
1939
|
+
});
|
|
1940
|
+
inputGraph.graph().width = layoutGraph.graph().width;
|
|
1941
|
+
inputGraph.graph().height = layoutGraph.graph().height;
|
|
1942
|
+
}
|
|
1943
|
+
var graphNumAttrs = ["nodesep", "edgesep", "ranksep", "marginx", "marginy"];
|
|
1944
|
+
var graphDefaults = { ranksep: 50, edgesep: 20, nodesep: 50, rankdir: "tb" };
|
|
1945
|
+
var graphAttrs = ["acyclicer", "ranker", "rankdir", "align"];
|
|
1946
|
+
var nodeNumAttrs = ["width", "height"];
|
|
1947
|
+
var nodeDefaults = { width: 0, height: 0 };
|
|
1948
|
+
var edgeNumAttrs = ["minlen", "weight", "width", "height", "labeloffset"];
|
|
1949
|
+
var edgeDefaults = {
|
|
1950
|
+
minlen: 1,
|
|
1951
|
+
weight: 1,
|
|
1952
|
+
width: 0,
|
|
1953
|
+
height: 0,
|
|
1954
|
+
labeloffset: 10,
|
|
1955
|
+
labelpos: "r"
|
|
1956
|
+
};
|
|
1957
|
+
var edgeAttrs = ["labelpos"];
|
|
1958
|
+
function buildLayoutGraph(inputGraph) {
|
|
1959
|
+
var g = new Graph({ multigraph: true, compound: true });
|
|
1960
|
+
var graph = canonicalize(inputGraph.graph());
|
|
1961
|
+
g.setGraph(
|
|
1962
|
+
merge({}, graphDefaults, selectNumberAttrs(graph, graphNumAttrs), pick(graph, graphAttrs))
|
|
1963
|
+
);
|
|
1964
|
+
forEach(inputGraph.nodes(), function(v) {
|
|
1965
|
+
var node = canonicalize(inputGraph.node(v));
|
|
1966
|
+
g.setNode(v, defaults(selectNumberAttrs(node, nodeNumAttrs), nodeDefaults));
|
|
1967
|
+
g.setParent(v, inputGraph.parent(v));
|
|
1968
|
+
});
|
|
1969
|
+
forEach(inputGraph.edges(), function(e) {
|
|
1970
|
+
var edge = canonicalize(inputGraph.edge(e));
|
|
1971
|
+
g.setEdge(
|
|
1972
|
+
e,
|
|
1973
|
+
merge({}, edgeDefaults, selectNumberAttrs(edge, edgeNumAttrs), pick(edge, edgeAttrs))
|
|
1974
|
+
);
|
|
1975
|
+
});
|
|
1976
|
+
return g;
|
|
1977
|
+
}
|
|
1978
|
+
function makeSpaceForEdgeLabels(g) {
|
|
1979
|
+
var graph = g.graph();
|
|
1980
|
+
graph.ranksep /= 2;
|
|
1981
|
+
forEach(g.edges(), function(e) {
|
|
1982
|
+
var edge = g.edge(e);
|
|
1983
|
+
edge.minlen *= 2;
|
|
1984
|
+
if (edge.labelpos.toLowerCase() !== "c") {
|
|
1985
|
+
if (graph.rankdir === "TB" || graph.rankdir === "BT") {
|
|
1986
|
+
edge.width += edge.labeloffset;
|
|
1987
|
+
} else {
|
|
1988
|
+
edge.height += edge.labeloffset;
|
|
1989
|
+
}
|
|
1990
|
+
}
|
|
1991
|
+
});
|
|
1992
|
+
}
|
|
1993
|
+
function injectEdgeLabelProxies(g) {
|
|
1994
|
+
forEach(g.edges(), function(e) {
|
|
1995
|
+
var edge = g.edge(e);
|
|
1996
|
+
if (edge.width && edge.height) {
|
|
1997
|
+
var v = g.node(e.v);
|
|
1998
|
+
var w = g.node(e.w);
|
|
1999
|
+
var label = { rank: (w.rank - v.rank) / 2 + v.rank, e };
|
|
2000
|
+
addDummyNode(g, "edge-proxy", label, "_ep");
|
|
2001
|
+
}
|
|
2002
|
+
});
|
|
2003
|
+
}
|
|
2004
|
+
function assignRankMinMax(g) {
|
|
2005
|
+
var maxRank2 = 0;
|
|
2006
|
+
forEach(g.nodes(), function(v) {
|
|
2007
|
+
var node = g.node(v);
|
|
2008
|
+
if (node.borderTop) {
|
|
2009
|
+
node.minRank = g.node(node.borderTop).rank;
|
|
2010
|
+
node.maxRank = g.node(node.borderBottom).rank;
|
|
2011
|
+
maxRank2 = max(maxRank2, node.maxRank);
|
|
2012
|
+
}
|
|
2013
|
+
});
|
|
2014
|
+
g.graph().maxRank = maxRank2;
|
|
2015
|
+
}
|
|
2016
|
+
function removeEdgeLabelProxies(g) {
|
|
2017
|
+
forEach(g.nodes(), function(v) {
|
|
2018
|
+
var node = g.node(v);
|
|
2019
|
+
if (node.dummy === "edge-proxy") {
|
|
2020
|
+
g.edge(node.e).labelRank = node.rank;
|
|
2021
|
+
g.removeNode(v);
|
|
2022
|
+
}
|
|
2023
|
+
});
|
|
2024
|
+
}
|
|
2025
|
+
function translateGraph(g) {
|
|
2026
|
+
var minX = Number.POSITIVE_INFINITY;
|
|
2027
|
+
var maxX = 0;
|
|
2028
|
+
var minY = Number.POSITIVE_INFINITY;
|
|
2029
|
+
var maxY = 0;
|
|
2030
|
+
var graphLabel = g.graph();
|
|
2031
|
+
var marginX = graphLabel.marginx || 0;
|
|
2032
|
+
var marginY = graphLabel.marginy || 0;
|
|
2033
|
+
function getExtremes(attrs) {
|
|
2034
|
+
var x = attrs.x;
|
|
2035
|
+
var y = attrs.y;
|
|
2036
|
+
var w = attrs.width;
|
|
2037
|
+
var h = attrs.height;
|
|
2038
|
+
minX = Math.min(minX, x - w / 2);
|
|
2039
|
+
maxX = Math.max(maxX, x + w / 2);
|
|
2040
|
+
minY = Math.min(minY, y - h / 2);
|
|
2041
|
+
maxY = Math.max(maxY, y + h / 2);
|
|
2042
|
+
}
|
|
2043
|
+
forEach(g.nodes(), function(v) {
|
|
2044
|
+
getExtremes(g.node(v));
|
|
2045
|
+
});
|
|
2046
|
+
forEach(g.edges(), function(e) {
|
|
2047
|
+
var edge = g.edge(e);
|
|
2048
|
+
if (Object.prototype.hasOwnProperty.call(edge, "x")) {
|
|
2049
|
+
getExtremes(edge);
|
|
2050
|
+
}
|
|
2051
|
+
});
|
|
2052
|
+
minX -= marginX;
|
|
2053
|
+
minY -= marginY;
|
|
2054
|
+
forEach(g.nodes(), function(v) {
|
|
2055
|
+
var node = g.node(v);
|
|
2056
|
+
node.x -= minX;
|
|
2057
|
+
node.y -= minY;
|
|
2058
|
+
});
|
|
2059
|
+
forEach(g.edges(), function(e) {
|
|
2060
|
+
var edge = g.edge(e);
|
|
2061
|
+
forEach(edge.points, function(p) {
|
|
2062
|
+
p.x -= minX;
|
|
2063
|
+
p.y -= minY;
|
|
2064
|
+
});
|
|
2065
|
+
if (Object.prototype.hasOwnProperty.call(edge, "x")) {
|
|
2066
|
+
edge.x -= minX;
|
|
2067
|
+
}
|
|
2068
|
+
if (Object.prototype.hasOwnProperty.call(edge, "y")) {
|
|
2069
|
+
edge.y -= minY;
|
|
2070
|
+
}
|
|
2071
|
+
});
|
|
2072
|
+
graphLabel.width = maxX - minX + marginX;
|
|
2073
|
+
graphLabel.height = maxY - minY + marginY;
|
|
2074
|
+
}
|
|
2075
|
+
function assignNodeIntersects(g) {
|
|
2076
|
+
forEach(g.edges(), function(e) {
|
|
2077
|
+
var edge = g.edge(e);
|
|
2078
|
+
var nodeV = g.node(e.v);
|
|
2079
|
+
var nodeW = g.node(e.w);
|
|
2080
|
+
var p1, p2;
|
|
2081
|
+
if (!edge.points) {
|
|
2082
|
+
edge.points = [];
|
|
2083
|
+
p1 = nodeW;
|
|
2084
|
+
p2 = nodeV;
|
|
2085
|
+
} else {
|
|
2086
|
+
p1 = edge.points[0];
|
|
2087
|
+
p2 = edge.points[edge.points.length - 1];
|
|
2088
|
+
}
|
|
2089
|
+
edge.points.unshift(intersectRect(nodeV, p1));
|
|
2090
|
+
edge.points.push(intersectRect(nodeW, p2));
|
|
2091
|
+
});
|
|
2092
|
+
}
|
|
2093
|
+
function fixupEdgeLabelCoords(g) {
|
|
2094
|
+
forEach(g.edges(), function(e) {
|
|
2095
|
+
var edge = g.edge(e);
|
|
2096
|
+
if (Object.prototype.hasOwnProperty.call(edge, "x")) {
|
|
2097
|
+
if (edge.labelpos === "l" || edge.labelpos === "r") {
|
|
2098
|
+
edge.width -= edge.labeloffset;
|
|
2099
|
+
}
|
|
2100
|
+
switch (edge.labelpos) {
|
|
2101
|
+
case "l":
|
|
2102
|
+
edge.x -= edge.width / 2 + edge.labeloffset;
|
|
2103
|
+
break;
|
|
2104
|
+
case "r":
|
|
2105
|
+
edge.x += edge.width / 2 + edge.labeloffset;
|
|
2106
|
+
break;
|
|
2107
|
+
}
|
|
2108
|
+
}
|
|
2109
|
+
});
|
|
2110
|
+
}
|
|
2111
|
+
function reversePointsForReversedEdges(g) {
|
|
2112
|
+
forEach(g.edges(), function(e) {
|
|
2113
|
+
var edge = g.edge(e);
|
|
2114
|
+
if (edge.reversed) {
|
|
2115
|
+
edge.points.reverse();
|
|
2116
|
+
}
|
|
2117
|
+
});
|
|
2118
|
+
}
|
|
2119
|
+
function removeBorderNodes(g) {
|
|
2120
|
+
forEach(g.nodes(), function(v) {
|
|
2121
|
+
if (g.children(v).length) {
|
|
2122
|
+
var node = g.node(v);
|
|
2123
|
+
var t = g.node(node.borderTop);
|
|
2124
|
+
var b = g.node(node.borderBottom);
|
|
2125
|
+
var l = g.node(last(node.borderLeft));
|
|
2126
|
+
var r = g.node(last(node.borderRight));
|
|
2127
|
+
node.width = Math.abs(r.x - l.x);
|
|
2128
|
+
node.height = Math.abs(b.y - t.y);
|
|
2129
|
+
node.x = l.x + node.width / 2;
|
|
2130
|
+
node.y = t.y + node.height / 2;
|
|
2131
|
+
}
|
|
2132
|
+
});
|
|
2133
|
+
forEach(g.nodes(), function(v) {
|
|
2134
|
+
if (g.node(v).dummy === "border") {
|
|
2135
|
+
g.removeNode(v);
|
|
2136
|
+
}
|
|
2137
|
+
});
|
|
2138
|
+
}
|
|
2139
|
+
function removeSelfEdges(g) {
|
|
2140
|
+
forEach(g.edges(), function(e) {
|
|
2141
|
+
if (e.v === e.w) {
|
|
2142
|
+
var node = g.node(e.v);
|
|
2143
|
+
if (!node.selfEdges) {
|
|
2144
|
+
node.selfEdges = [];
|
|
2145
|
+
}
|
|
2146
|
+
node.selfEdges.push({ e, label: g.edge(e) });
|
|
2147
|
+
g.removeEdge(e);
|
|
2148
|
+
}
|
|
2149
|
+
});
|
|
2150
|
+
}
|
|
2151
|
+
function insertSelfEdges(g) {
|
|
2152
|
+
var layers = buildLayerMatrix(g);
|
|
2153
|
+
forEach(layers, function(layer) {
|
|
2154
|
+
var orderShift = 0;
|
|
2155
|
+
forEach(layer, function(v, i) {
|
|
2156
|
+
var node = g.node(v);
|
|
2157
|
+
node.order = i + orderShift;
|
|
2158
|
+
forEach(node.selfEdges, function(selfEdge) {
|
|
2159
|
+
addDummyNode(
|
|
2160
|
+
g,
|
|
2161
|
+
"selfedge",
|
|
2162
|
+
{
|
|
2163
|
+
width: selfEdge.label.width,
|
|
2164
|
+
height: selfEdge.label.height,
|
|
2165
|
+
rank: node.rank,
|
|
2166
|
+
order: i + ++orderShift,
|
|
2167
|
+
e: selfEdge.e,
|
|
2168
|
+
label: selfEdge.label
|
|
2169
|
+
},
|
|
2170
|
+
"_se"
|
|
2171
|
+
);
|
|
2172
|
+
});
|
|
2173
|
+
delete node.selfEdges;
|
|
2174
|
+
});
|
|
2175
|
+
});
|
|
2176
|
+
}
|
|
2177
|
+
function positionSelfEdges(g) {
|
|
2178
|
+
forEach(g.nodes(), function(v) {
|
|
2179
|
+
var node = g.node(v);
|
|
2180
|
+
if (node.dummy === "selfedge") {
|
|
2181
|
+
var selfNode = g.node(node.e.v);
|
|
2182
|
+
var x = selfNode.x + selfNode.width / 2;
|
|
2183
|
+
var y = selfNode.y;
|
|
2184
|
+
var dx = node.x - x;
|
|
2185
|
+
var dy = selfNode.height / 2;
|
|
2186
|
+
g.setEdge(node.e, node.label);
|
|
2187
|
+
g.removeNode(v);
|
|
2188
|
+
node.label.points = [
|
|
2189
|
+
{ x: x + 2 * dx / 3, y: y - dy },
|
|
2190
|
+
{ x: x + 5 * dx / 6, y: y - dy },
|
|
2191
|
+
{ x: x + dx, y },
|
|
2192
|
+
{ x: x + 5 * dx / 6, y: y + dy },
|
|
2193
|
+
{ x: x + 2 * dx / 3, y: y + dy }
|
|
2194
|
+
];
|
|
2195
|
+
node.label.x = node.x;
|
|
2196
|
+
node.label.y = node.y;
|
|
2197
|
+
}
|
|
2198
|
+
});
|
|
2199
|
+
}
|
|
2200
|
+
function selectNumberAttrs(obj, attrs) {
|
|
2201
|
+
return mapValues(pick(obj, attrs), Number);
|
|
2202
|
+
}
|
|
2203
|
+
function canonicalize(attrs) {
|
|
2204
|
+
var newAttrs = {};
|
|
2205
|
+
forEach(attrs, function(v, k) {
|
|
2206
|
+
newAttrs[k.toLowerCase()] = v;
|
|
2207
|
+
});
|
|
2208
|
+
return newAttrs;
|
|
2209
|
+
}
|
|
2210
|
+
export {
|
|
2211
|
+
defaults as d,
|
|
2212
|
+
layout as l,
|
|
2213
|
+
map as m,
|
|
2214
|
+
pick as p,
|
|
2215
|
+
range as r,
|
|
2216
|
+
uniqueId as u
|
|
2217
|
+
};
|