quantum-spherifier 1.0.0

package/research/hypotheses/quantum_error_correction/doc_83a8579f/manifest.json

@@ -0,0 +1,143 @@
+{
+  "id": "doc_83a8579f",
+  "version": "1.0",
+  "title": "Cat-qubit Bacon-Shor logical qubits with biased-noise protection, combined with QPE for molecular en",
+  "category": "hypotheses",
+  "topic": "quantum_error_correction",
+  "researchLine": "quantum_error_correction",
+  "tags": [
+    "qec",
+    "cross_linked",
+    "intermediate_result"
+  ],
+  "references": [
+    "qec_bacon_shor",
+    "qubit_cat",
+    "algo_qpe"
+  ],
+  "crossLinks": [
+    {
+      "id": "doc_05f0ed46",
+      "shared": 1,
+      "relationship": "related"
+    },
+    {
+      "id": "doc_0b51b472",
+      "shared": 1,
+      "relationship": "related"
+    },
+    {
+      "id": "doc_32b3ea58",
+      "shared": 1,
+      "relationship": "related"
+    },
+    {
+      "id": "doc_9c000140",
+      "shared": 1,
+      "relationship": "related"
+    },
+    {
+      "id": "doc_ae0d0b6f",
+      "shared": 1,
+      "relationship": "related"
+    }
+  ],
+  "patent": {
+    "eligible": false,
+    "claims": []
+  },
+  "createdAt": 1783512869598,
+  "updatedAt": 1783512869598,
+  "extra": {
+    "hypothesis": {
+      "statement": "Cat-qubit Bacon-Shor logical qubits with biased-noise protection, combined with QPE for molecular energy estimation, reduce the T-gate factory footprint by 4x-x, enabling FeMoco-scale chemistry on a 100000-physical-qubit processor — a coherent integration of QEC, qubit-modality, and algorithm advances.",
+      "rationale": "Synthesised by combining the qec_bacon_shor + qubit_cat + algo_qpe pattern within research line \"quantum_error_correction\" (cross-linking with \"molecular_simulation\"). The hypothesis is anchored to 3 knowledge-graph concepts to ensure no advance stays isolated.",
+      "supportingConcepts": [
+        "qec_bacon_shor",
+        "qubit_cat",
+        "algo_qpe"
+      ],
+      "predictedImpact": {
+        "metric": "factory_footprint",
+        "direction": "decrease",
+        "magnitude": "4x"
+      },
+      "parameters": {
+        "physicalQubits": 100000,
+        "logicalQubits": 3000,
+        "modality": "cat_bosonic",
+        "algorithm": "QPE",
+        "researchLine": "quantum_error_correction"
+      },
+      "feasibility": {
+        "tier": "long_term",
+        "confidence": 0.51,
+        "anchors": [],
+        "ruleResults": [
+          {
+            "tier": "mid_term",
+            "reason": "100000 physical qubits is 5-8 years from current 1K-scale"
+          },
+          {
+            "tier": "long_term",
+            "reason": "3000 logical qubits requires 2035+ fault-tolerant scale"
+          }
+        ],
+        "gaps": [
+          "Kilo-to-mega-qubit scale-up: requires new cryogenic wiring (cryo-CMOS) and calibration automation",
+          "Code distance must increase to ≥5 for multiple logical qubits with useful error rates"
+        ],
+        "costEstimate": {
+          "low": 5000000000,
+          "high": 50000000000,
+          "currency": "USD",
+          "note": "Order-of-magnitude estimate; refine with bottom-up EPC + cryogenics + control electronics analysis."
+        },
+        "timelineEstimate": "10-20 years",
+        "resourceProfile": {
+          "physicalQubits": 100000,
+          "logicalQubits": 3000,
+          "codeDistance": null,
+          "tgateCount": null,
+          "modality": "cat_bosonic",
+          "cryoRequired": false,
+          "operatingTemp": "10-20mK (dilution refrigerator)"
+        },
+        "crossLinks": {
+          "linkedConcepts": 3,
+          "totalConcepts": 3,
+          "sufficient": true,
+          "note": "Solution is cross-linked to the quantum knowledge graph."
+        },
+        "patentEligible": false
+      },
+      "patentabilityHint": "MAYBE",
+      "proposedExperiments": [
+        "Implement a distance-7 code on a cat_bosonic processor and measure the logical error rate over 10000 cycles.",
+        "Simulate the decoder (MWPM or neural) under realistic circuit-level noise to verify threshold crossing.",
+        "Benchmark syndrome extraction latency against the coherence budget to ensure real-time decoding feasibility."
+      ],
+      "source": "template",
+      "templatePattern": [
+        "qec_bacon_shor",
+        "qubit_cat",
+        "algo_qpe"
+      ],
+      "id": "hyp_d6e4f1d6",
+      "researchLine": "quantum_error_correction",
+      "crossLink": true,
+      "pairedLine": "molecular_simulation",
+      "createdAt": 1783512869548,
+      "seedTopic": "qubit_nv_center"
+    },
+    "routing": {
+      "line": "quantum_error_correction",
+      "crossLink": true,
+      "pairedLine": "molecular_simulation",
+      "seedTopic": "qec_surface_code"
+    }
+  },
+  "files": {
+    "markdown": "main.md"
+  }
+}

package/research/hypotheses/quantum_error_correction/doc_8ec38dbd/main.md

@@ -0,0 +1,62 @@
+# A reconfigurable neutral-atom platform implementing a qLDPC code with constant-rate encoding provides the 3000 logical q
+
+**ID:** hyp_32fd5325
+**Research Line:** quantum_error_correction (cross-linking with new_qubit_modalities)
+**Source:** template
+**Created:** 2026-07-08T12:17:13.495Z
+
+## Research Line: Quantum Error Correction
+
+Build fault-tolerant logical qubits by suppressing physical errors below threshold and reducing overhead.
+
+## Statement
+
+A reconfigurable neutral-atom platform implementing a qLDPC code with constant-rate encoding provides the 3000 logical qubits needed for FeMoco simulation at 10x-x lower physical-qubit overhead than surface-code architectures, bridging QEC, qubit-modality, and molecular-simulation advances into a single viable path to useful quantum chemistry.
+
+## Rationale
+
+Synthesised by combining the qec_qldpc + qubit_neutral_atom + sim_femoco pattern within research line "quantum_error_correction" (cross-linking with "new_qubit_modalities"). The hypothesis is anchored to 2 knowledge-graph concepts to ensure no advance stays isolated.
+
+## Supporting Concepts (Cross-Links)
+
+> quantum-spherifier principle: every hypothesis must cross-link to the KG — nothing stays isolated.
+
+- qec_qldpc
+- qubit_neutral_atom
+
+## Predicted Impact
+
+Metric: **physical_qubit_overhead** — decrease by 10x
+
+## Feasibility Assessment
+
+Tier: **long_term** (confidence 0.59)
+
+### Resource Anchors
+
+
+### Identified Gaps
+
+- Kilo-to-mega-qubit scale-up: requires new cryogenic wiring (cryo-CMOS) and calibration automation
+- Code distance must increase to ≥5 for multiple logical qubits with useful error rates
+
+### Resource Profile
+
+Physical qubits: 50000
+Logical qubits: 3000
+Code distance: —
+Modality: neutral_atom
+Operating temp: µK (magneto-optical trap)
+
+### Cross-Link Verification
+
+✓ Solution is cross-linked to 2 KG concept(s).
+
+## Proposed Experiments
+
+- Implement a distance-7 code on a neutral_atom processor and measure the logical error rate over 10000 cycles.
+- Simulate the decoder (MWPM or neural) under realistic circuit-level noise to verify threshold crossing.
+- Benchmark syndrome extraction latency against the coherence budget to ensure real-time decoding feasibility.
+
+## Candidate Patent Claims
+

package/research/hypotheses/quantum_error_correction/doc_8ec38dbd/manifest.json

@@ -0,0 +1,146 @@
+{
+  "id": "doc_8ec38dbd",
+  "version": "1.0",
+  "title": "A reconfigurable neutral-atom platform implementing a qLDPC code with constant-rate encoding provide",
+  "category": "hypotheses",
+  "topic": "quantum_error_correction",
+  "researchLine": "quantum_error_correction",
+  "tags": [
+    "qec",
+    "cross_linked",
+    "intermediate_result"
+  ],
+  "references": [
+    "qec_qldpc",
+    "qubit_neutral_atom"
+  ],
+  "crossLinks": [
+    {
+      "id": "doc_07aff3d1",
+      "shared": 1,
+      "relationship": "related"
+    },
+    {
+      "id": "doc_08e086ad",
+      "shared": 1,
+      "relationship": "related"
+    },
+    {
+      "id": "doc_0f665487",
+      "shared": 2,
+      "relationship": "builds_on"
+    },
+    {
+      "id": "doc_2014700e",
+      "shared": 1,
+      "relationship": "related"
+    },
+    {
+      "id": "doc_25a11cb2",
+      "shared": 1,
+      "relationship": "related"
+    }
+  ],
+  "patent": {
+    "eligible": false,
+    "claims": []
+  },
+  "createdAt": 1783513033568,
+  "updatedAt": 1783513033568,
+  "extra": {
+    "hypothesis": {
+      "statement": "A reconfigurable neutral-atom platform implementing a qLDPC code with constant-rate encoding provides the 3000 logical qubits needed for FeMoco simulation at 10x-x lower physical-qubit overhead than surface-code architectures, bridging QEC, qubit-modality, and molecular-simulation advances into a single viable path to useful quantum chemistry.",
+      "rationale": "Synthesised by combining the qec_qldpc + qubit_neutral_atom + sim_femoco pattern within research line \"quantum_error_correction\" (cross-linking with \"new_qubit_modalities\"). The hypothesis is anchored to 2 knowledge-graph concepts to ensure no advance stays isolated.",
+      "supportingConcepts": [
+        "qec_qldpc",
+        "qubit_neutral_atom"
+      ],
+      "predictedImpact": {
+        "metric": "physical_qubit_overhead",
+        "direction": "decrease",
+        "magnitude": "10x"
+      },
+      "parameters": {
+        "physicalQubits": 50000,
+        "logicalQubits": 3000,
+        "modality": "neutral_atom",
+        "code": "qLDPC",
+        "application": "FeMoco",
+        "researchLine": "quantum_error_correction"
+      },
+      "feasibility": {
+        "tier": "long_term",
+        "confidence": 0.59,
+        "anchors": [],
+        "ruleResults": [
+          {
+            "tier": "mid_term",
+            "reason": "50000 physical qubits is 5-8 years from current 1K-scale"
+          },
+          {
+            "tier": "long_term",
+            "reason": "3000 logical qubits requires 2035+ fault-tolerant scale"
+          },
+          {
+            "tier": "current",
+            "reason": "neutral_atom: demonstrated at scale (IBM, Google, IonQ, Atom)"
+          }
+        ],
+        "gaps": [
+          "Kilo-to-mega-qubit scale-up: requires new cryogenic wiring (cryo-CMOS) and calibration automation",
+          "Code distance must increase to ≥5 for multiple logical qubits with useful error rates"
+        ],
+        "costEstimate": {
+          "low": 5000000000,
+          "high": 50000000000,
+          "currency": "USD",
+          "note": "Order-of-magnitude estimate; refine with bottom-up EPC + cryogenics + control electronics analysis."
+        },
+        "timelineEstimate": "10-20 years",
+        "resourceProfile": {
+          "physicalQubits": 50000,
+          "logicalQubits": 3000,
+          "codeDistance": null,
+          "tgateCount": null,
+          "modality": "neutral_atom",
+          "cryoRequired": false,
+          "operatingTemp": "µK (magneto-optical trap)"
+        },
+        "crossLinks": {
+          "linkedConcepts": 2,
+          "totalConcepts": 2,
+          "sufficient": true,
+          "note": "Solution is cross-linked to the quantum knowledge graph."
+        },
+        "patentEligible": false
+      },
+      "patentabilityHint": "MAYBE",
+      "proposedExperiments": [
+        "Implement a distance-7 code on a neutral_atom processor and measure the logical error rate over 10000 cycles.",
+        "Simulate the decoder (MWPM or neural) under realistic circuit-level noise to verify threshold crossing.",
+        "Benchmark syndrome extraction latency against the coherence budget to ensure real-time decoding feasibility."
+      ],
+      "source": "template",
+      "templatePattern": [
+        "qec_qldpc",
+        "qubit_neutral_atom",
+        "sim_femoco"
+      ],
+      "id": "hyp_32fd5325",
+      "researchLine": "quantum_error_correction",
+      "crossLink": true,
+      "pairedLine": "new_qubit_modalities",
+      "createdAt": 1783513033495,
+      "seedTopic": "qubit_nv_center"
+    },
+    "routing": {
+      "line": "quantum_error_correction",
+      "crossLink": true,
+      "pairedLine": "new_qubit_modalities",
+      "seedTopic": "qec_surface_code"
+    }
+  },
+  "files": {
+    "markdown": "main.md"
+  }
+}

package/research/hypotheses/quantum_error_correction/doc_90cb416e/main.md

@@ -0,0 +1,61 @@
+# Fluxonium qubits with T1 = 1000 ms extend the effective circuit depth for NISQ-era VQE on transition-metal catalysts by 
+
+**ID:** hyp_0dbc4895
+**Research Line:** quantum_error_correction (cross-linking with new_qubit_modalities)
+**Source:** template
+**Created:** 2026-07-08T12:22:15.492Z
+
+## Research Line: Quantum Error Correction
+
+Build fault-tolerant logical qubits by suppressing physical errors below threshold and reducing overhead.
+
+## Statement
+
+Fluxonium qubits with T1 = 1000 ms extend the effective circuit depth for NISQ-era VQE on transition-metal catalysts by 10x-x, while a QSVT-structured ansatz reduces gate count by 5-x — together enabling catalyst screening beyond classical DFT accuracy.
+
+## Rationale
+
+Synthesised by combining the algo_qsvt + qubit_fluxonium + sim_transition_metal pattern within research line "quantum_error_correction" (cross-linking with "new_qubit_modalities"). The hypothesis is anchored to 3 knowledge-graph concepts to ensure no advance stays isolated.
+
+## Supporting Concepts (Cross-Links)
+
+> quantum-spherifier principle: every hypothesis must cross-link to the KG — nothing stays isolated.
+
+- algo_qsvt
+- qubit_fluxonium
+- sim_transition_metal
+
+## Predicted Impact
+
+Metric: **effective_circuit_depth** — increase by 10x
+
+## Feasibility Assessment
+
+Tier: **mid_term** (confidence 0.51)
+
+### Resource Anchors
+
+
+### Identified Gaps
+
+
+### Resource Profile
+
+Physical qubits: 200
+Logical qubits: —
+Code distance: —
+Modality: fluxonium
+Operating temp: 10-20mK (dilution refrigerator)
+
+### Cross-Link Verification
+
+✓ Solution is cross-linked to 3 KG concept(s).
+
+## Proposed Experiments
+
+- Implement a distance-7 code on a fluxonium processor and measure the logical error rate over 10000 cycles.
+- Simulate the decoder (MWPM or neural) under realistic circuit-level noise to verify threshold crossing.
+- Benchmark syndrome extraction latency against the coherence budget to ensure real-time decoding feasibility.
+
+## Candidate Patent Claims
+

package/research/hypotheses/quantum_error_correction/doc_90cb416e/manifest.json

@@ -0,0 +1,140 @@
+{
+  "id": "doc_90cb416e",
+  "version": "1.0",
+  "title": "Fluxonium qubits with T1 = 1000 ms extend the effective circuit depth for NISQ-era VQE on transition",
+  "category": "hypotheses",
+  "topic": "quantum_error_correction",
+  "researchLine": "quantum_error_correction",
+  "tags": [
+    "qec",
+    "cross_linked",
+    "intermediate_result"
+  ],
+  "references": [
+    "algo_qsvt",
+    "qubit_fluxonium",
+    "sim_transition_metal"
+  ],
+  "crossLinks": [
+    {
+      "id": "doc_0035ce8c",
+      "shared": 1,
+      "relationship": "related"
+    },
+    {
+      "id": "doc_0894efe7",
+      "shared": 1,
+      "relationship": "related"
+    },
+    {
+      "id": "doc_1f409f63",
+      "shared": 1,
+      "relationship": "related"
+    },
+    {
+      "id": "doc_22744a09",
+      "shared": 1,
+      "relationship": "related"
+    },
+    {
+      "id": "doc_26180f52",
+      "shared": 1,
+      "relationship": "related"
+    }
+  ],
+  "patent": {
+    "eligible": false,
+    "claims": []
+  },
+  "createdAt": 1783513335585,
+  "updatedAt": 1783513335585,
+  "extra": {
+    "hypothesis": {
+      "statement": "Fluxonium qubits with T1 = 1000 ms extend the effective circuit depth for NISQ-era VQE on transition-metal catalysts by 10x-x, while a QSVT-structured ansatz reduces gate count by 5-x — together enabling catalyst screening beyond classical DFT accuracy.",
+      "rationale": "Synthesised by combining the algo_qsvt + qubit_fluxonium + sim_transition_metal pattern within research line \"quantum_error_correction\" (cross-linking with \"new_qubit_modalities\"). The hypothesis is anchored to 3 knowledge-graph concepts to ensure no advance stays isolated.",
+      "supportingConcepts": [
+        "algo_qsvt",
+        "qubit_fluxonium",
+        "sim_transition_metal"
+      ],
+      "predictedImpact": {
+        "metric": "effective_circuit_depth",
+        "direction": "increase",
+        "magnitude": "10x"
+      },
+      "parameters": {
+        "physicalQubits": 200,
+        "modality": "fluxonium",
+        "algorithm": "VQE_QSVT_ansatz",
+        "T1_s": 1,
+        "researchLine": "quantum_error_correction"
+      },
+      "feasibility": {
+        "tier": "mid_term",
+        "confidence": 0.51,
+        "anchors": [],
+        "ruleResults": [
+          {
+            "tier": "current",
+            "reason": "200 physical qubits demonstrated (IBM Condor 1121, Atom 1180)"
+          },
+          {
+            "tier": "current",
+            "reason": "T1=1000.0ms within superconducting / neutral atom range"
+          }
+        ],
+        "gaps": [],
+        "costEstimate": {
+          "low": 500000000,
+          "high": 5000000000,
+          "currency": "USD",
+          "note": "Order-of-magnitude estimate; refine with bottom-up EPC + cryogenics + control electronics analysis."
+        },
+        "timelineEstimate": "5-10 years",
+        "resourceProfile": {
+          "physicalQubits": 200,
+          "logicalQubits": null,
+          "codeDistance": null,
+          "tgateCount": null,
+          "modality": "fluxonium",
+          "cryoRequired": false,
+          "operatingTemp": "10-20mK (dilution refrigerator)"
+        },
+        "crossLinks": {
+          "linkedConcepts": 3,
+          "totalConcepts": 3,
+          "sufficient": true,
+          "note": "Solution is cross-linked to the quantum knowledge graph."
+        },
+        "patentEligible": false
+      },
+      "patentabilityHint": "MAYBE",
+      "proposedExperiments": [
+        "Implement a distance-7 code on a fluxonium processor and measure the logical error rate over 10000 cycles.",
+        "Simulate the decoder (MWPM or neural) under realistic circuit-level noise to verify threshold crossing.",
+        "Benchmark syndrome extraction latency against the coherence budget to ensure real-time decoding feasibility."
+      ],
+      "source": "template",
+      "templatePattern": [
+        "algo_qsvt",
+        "qubit_fluxonium",
+        "sim_transition_metal"
+      ],
+      "id": "hyp_0dbc4895",
+      "researchLine": "quantum_error_correction",
+      "crossLink": true,
+      "pairedLine": "new_qubit_modalities",
+      "createdAt": 1783513335492,
+      "seedTopic": "qubit_nv_center"
+    },
+    "routing": {
+      "line": "quantum_error_correction",
+      "crossLink": true,
+      "pairedLine": "new_qubit_modalities",
+      "seedTopic": "qec_surface_code"
+    }
+  },
+  "files": {
+    "markdown": "main.md"
+  }
+}

package/research/hypotheses/quantum_error_correction/doc_a40b574c/main.md

@@ -0,0 +1,62 @@
+# A reconfigurable neutral-atom platform implementing a qLDPC code with constant-rate encoding provides the 3000 logical q
+
+**ID:** hyp_cfc69ff7
+**Research Line:** quantum_error_correction (cross-linking with quantum_algorithms)
+**Source:** template
+**Created:** 2026-07-08T12:01:01.639Z
+
+## Research Line: Quantum Error Correction
+
+Build fault-tolerant logical qubits by suppressing physical errors below threshold and reducing overhead.
+
+## Statement
+
+A reconfigurable neutral-atom platform implementing a qLDPC code with constant-rate encoding provides the 3000 logical qubits needed for FeMoco simulation at 10x-x lower physical-qubit overhead than surface-code architectures, bridging QEC, qubit-modality, and molecular-simulation advances into a single viable path to useful quantum chemistry.
+
+## Rationale
+
+Synthesised by combining the qec_qldpc + qubit_neutral_atom + sim_femoco pattern within research line "quantum_error_correction" (cross-linking with "quantum_algorithms"). The hypothesis is anchored to 2 knowledge-graph concepts to ensure no advance stays isolated.
+
+## Supporting Concepts (Cross-Links)
+
+> quantum-spherifier principle: every hypothesis must cross-link to the KG — nothing stays isolated.
+
+- qec_qldpc
+- qubit_neutral_atom
+
+## Predicted Impact
+
+Metric: **physical_qubit_overhead** — decrease by 10x
+
+## Feasibility Assessment
+
+Tier: **long_term** (confidence 0.59)
+
+### Resource Anchors
+
+
+### Identified Gaps
+
+- Kilo-to-mega-qubit scale-up: requires new cryogenic wiring (cryo-CMOS) and calibration automation
+- Code distance must increase to ≥5 for multiple logical qubits with useful error rates
+
+### Resource Profile
+
+Physical qubits: 50000
+Logical qubits: 3000
+Code distance: —
+Modality: neutral_atom
+Operating temp: µK (magneto-optical trap)
+
+### Cross-Link Verification
+
+✓ Solution is cross-linked to 2 KG concept(s).
+
+## Proposed Experiments
+
+- Implement a distance-7 code on a neutral_atom processor and measure the logical error rate over 10000 cycles.
+- Simulate the decoder (MWPM or neural) under realistic circuit-level noise to verify threshold crossing.
+- Benchmark syndrome extraction latency against the coherence budget to ensure real-time decoding feasibility.
+
+## Candidate Patent Claims
+