quantum-spherifier 1.0.0

package/research/hypotheses/new_qubit_modalities/doc_22744a09/main.md

@@ -0,0 +1,60 @@
+# A fluxonium-on-sapphire qubit with T1 = 1000 ms and 2-qubit gate fidelity of 99.9% achieves a 3x-fold coherence improvem
+
+**ID:** hyp_5ea89b15
+**Research Line:** new_qubit_modalities
+**Source:** template
+**Created:** 2026-07-08T12:07:14.870Z
+
+## Research Line: Molecular Simulation
+
+Simulate fermionic systems (catalysts, drugs, materials) beyond classical capability.
+
+## Statement
+
+A fluxonium-on-sapphire qubit with T1 = 1000 ms and 2-qubit gate fidelity of 99.9% achieves a 3x-fold coherence improvement over state-of-the-art transmons while retaining CMOS-compatible fabrication, enabling deeper circuits on 100-qubit processors without QEC.
+
+## Rationale
+
+Synthesised by combining the qubit_fluxonium + qubit_transmon pattern within research line "new_qubit_modalities". The hypothesis is anchored to 2 knowledge-graph concepts to ensure no advance stays isolated.
+
+## Supporting Concepts (Cross-Links)
+
+> quantum-spherifier principle: every hypothesis must cross-link to the KG — nothing stays isolated.
+
+- qubit_fluxonium
+- qubit_transmon
+
+## Predicted Impact
+
+Metric: **T1** — increase by 3x
+
+## Feasibility Assessment
+
+Tier: **mid_term** (confidence 0.59)
+
+### Resource Anchors
+
+
+### Identified Gaps
+
+
+### Resource Profile
+
+Physical qubits: 100
+Logical qubits: —
+Code distance: —
+Modality: superconducting_fluxonium
+Operating temp: 10-20mK (dilution refrigerator)
+
+### Cross-Link Verification
+
+✓ Solution is cross-linked to 2 KG concept(s).
+
+## Proposed Experiments
+
+- Fabricate a superconducting_fluxonium test chip and measure T1, T2, and 2-qubit gate fidelity over 1000 randomized benchmarking sequences.
+- Characterize the noise spectrum (1/f, quasiparticle, photon shot noise) to identify the dominant decoherence channel.
+- Scale to a 2x2 or 3x3 grid and verify cross-talk remains below the QEC threshold.
+
+## Candidate Patent Claims
+

package/research/hypotheses/new_qubit_modalities/doc_22744a09/manifest.json

@@ -0,0 +1,139 @@
+{
+  "id": "doc_22744a09",
+  "version": "1.0",
+  "title": "A fluxonium-on-sapphire qubit with T1 = 1000 ms and 2-qubit gate fidelity of 99.9% achieves a 3x-fol",
+  "category": "hypotheses",
+  "topic": "new_qubit_modalities",
+  "researchLine": "new_qubit_modalities",
+  "tags": [
+    "qubits",
+    "intermediate_result"
+  ],
+  "references": [
+    "qubit_fluxonium",
+    "qubit_transmon"
+  ],
+  "crossLinks": [
+    {
+      "id": "doc_0705eed0",
+      "shared": 1,
+      "relationship": "related"
+    },
+    {
+      "id": "doc_0894efe7",
+      "shared": 2,
+      "relationship": "builds_on"
+    },
+    {
+      "id": "doc_0929ce83",
+      "shared": 1,
+      "relationship": "related"
+    },
+    {
+      "id": "doc_0d9f04a2",
+      "shared": 1,
+      "relationship": "related"
+    },
+    {
+      "id": "doc_18a79edc",
+      "shared": 1,
+      "relationship": "related"
+    }
+  ],
+  "patent": {
+    "eligible": false,
+    "claims": []
+  },
+  "createdAt": 1783512434911,
+  "updatedAt": 1783512434911,
+  "extra": {
+    "hypothesis": {
+      "statement": "A fluxonium-on-sapphire qubit with T1 = 1000 ms and 2-qubit gate fidelity of 99.9% achieves a 3x-fold coherence improvement over state-of-the-art transmons while retaining CMOS-compatible fabrication, enabling deeper circuits on 100-qubit processors without QEC.",
+      "rationale": "Synthesised by combining the qubit_fluxonium + qubit_transmon pattern within research line \"new_qubit_modalities\". The hypothesis is anchored to 2 knowledge-graph concepts to ensure no advance stays isolated.",
+      "supportingConcepts": [
+        "qubit_fluxonium",
+        "qubit_transmon"
+      ],
+      "predictedImpact": {
+        "metric": "T1",
+        "direction": "increase",
+        "magnitude": "3x"
+      },
+      "parameters": {
+        "modality": "superconducting_fluxonium",
+        "T1_s": 1,
+        "gate2qFidelity": 0.999,
+        "physicalQubits": 100,
+        "researchLine": "new_qubit_modalities"
+      },
+      "feasibility": {
+        "tier": "mid_term",
+        "confidence": 0.59,
+        "anchors": [],
+        "ruleResults": [
+          {
+            "tier": "current",
+            "reason": "100 physical qubits well within current capability"
+          },
+          {
+            "tier": "current",
+            "reason": "2Q fidelity 99.90% excellent (Quantinuum H2: 99.87%)"
+          },
+          {
+            "tier": "current",
+            "reason": "T1=1000.0ms within superconducting / neutral atom range"
+          }
+        ],
+        "gaps": [],
+        "costEstimate": {
+          "low": 500000000,
+          "high": 5000000000,
+          "currency": "USD",
+          "note": "Order-of-magnitude estimate; refine with bottom-up EPC + cryogenics + control electronics analysis."
+        },
+        "timelineEstimate": "5-10 years",
+        "resourceProfile": {
+          "physicalQubits": 100,
+          "logicalQubits": null,
+          "codeDistance": null,
+          "tgateCount": null,
+          "modality": "superconducting_fluxonium",
+          "cryoRequired": false,
+          "operatingTemp": "10-20mK (dilution refrigerator)"
+        },
+        "crossLinks": {
+          "linkedConcepts": 2,
+          "totalConcepts": 2,
+          "sufficient": true,
+          "note": "Solution is cross-linked to the quantum knowledge graph."
+        },
+        "patentEligible": false
+      },
+      "patentabilityHint": "MAYBE",
+      "proposedExperiments": [
+        "Fabricate a superconducting_fluxonium test chip and measure T1, T2, and 2-qubit gate fidelity over 1000 randomized benchmarking sequences.",
+        "Characterize the noise spectrum (1/f, quasiparticle, photon shot noise) to identify the dominant decoherence channel.",
+        "Scale to a 2x2 or 3x3 grid and verify cross-talk remains below the QEC threshold."
+      ],
+      "source": "template",
+      "templatePattern": [
+        "qubit_fluxonium",
+        "qubit_transmon"
+      ],
+      "id": "hyp_5ea89b15",
+      "researchLine": "new_qubit_modalities",
+      "crossLink": false,
+      "pairedLine": null,
+      "createdAt": 1783512434870,
+      "seedTopic": "qubit_nv_center"
+    },
+    "routing": {
+      "line": "new_qubit_modalities",
+      "crossLink": false,
+      "seedTopic": "sim_transition_metal"
+    }
+  },
+  "files": {
+    "markdown": "main.md"
+  }
+}

package/research/hypotheses/new_qubit_modalities/doc_25a11cb2/main.md

@@ -0,0 +1,59 @@
+# A hybrid architecture using 1000 neutral-atom qubits for computation and 100 silicon-spin qubits for long-term quantum m
+
+**ID:** hyp_4b5ffe83
+**Research Line:** new_qubit_modalities
+**Source:** template
+**Created:** 2026-07-08T12:05:37.061Z
+
+## Research Line: Quantum Algorithms
+
+Discover and optimize algorithms with provable or practical quantum advantage on near-term and fault-tolerant hardware.
+
+## Statement
+
+A hybrid architecture using 1000 neutral-atom qubits for computation and 100 silicon-spin qubits for long-term quantum memory (T2 = 10 ms) enables coherent interleaving of subroutines across a 100x-times-longer effective circuit depth.
+
+## Rationale
+
+Synthesised by combining the qubit_neutral_atom + qubit_silicon_spin pattern within research line "new_qubit_modalities". The hypothesis is anchored to 1 knowledge-graph concepts to ensure no advance stays isolated.
+
+## Supporting Concepts (Cross-Links)
+
+> quantum-spherifier principle: every hypothesis must cross-link to the KG — nothing stays isolated.
+
+- qubit_neutral_atom
+
+## Predicted Impact
+
+Metric: **effective_coherence** — increase by 100x
+
+## Feasibility Assessment
+
+Tier: **mid_term** (confidence 0.43)
+
+### Resource Anchors
+
+
+### Identified Gaps
+
+
+### Resource Profile
+
+Physical qubits: 1000
+Logical qubits: —
+Code distance: —
+Modality: hybrid_neutral_spin
+Operating temp: 10-20mK (dilution refrigerator)
+
+### Cross-Link Verification
+
+✓ Solution is cross-linked to 1 KG concept(s).
+
+## Proposed Experiments
+
+- Fabricate a hybrid_neutral_spin test chip and measure T1, T2, and 2-qubit gate fidelity over 1000 randomized benchmarking sequences.
+- Characterize the noise spectrum (1/f, quasiparticle, photon shot noise) to identify the dominant decoherence channel.
+- Scale to a 2x2 or 3x3 grid and verify cross-talk remains below the QEC threshold.
+
+## Candidate Patent Claims
+

package/research/hypotheses/new_qubit_modalities/doc_25a11cb2/manifest.json

@@ -0,0 +1,128 @@
+{
+  "id": "doc_25a11cb2",
+  "version": "1.0",
+  "title": "A hybrid architecture using 1000 neutral-atom qubits for computation and 100 silicon-spin qubits for",
+  "category": "hypotheses",
+  "topic": "new_qubit_modalities",
+  "researchLine": "new_qubit_modalities",
+  "tags": [
+    "qubits",
+    "intermediate_result"
+  ],
+  "references": [
+    "qubit_neutral_atom"
+  ],
+  "crossLinks": [
+    {
+      "id": "doc_07aff3d1",
+      "shared": 1,
+      "relationship": "related"
+    },
+    {
+      "id": "doc_08e086ad",
+      "shared": 1,
+      "relationship": "related"
+    },
+    {
+      "id": "doc_2014700e",
+      "shared": 1,
+      "relationship": "related"
+    },
+    {
+      "id": "doc_3d55724e",
+      "shared": 1,
+      "relationship": "related"
+    },
+    {
+      "id": "doc_3e27ad06",
+      "shared": 1,
+      "relationship": "related"
+    }
+  ],
+  "patent": {
+    "eligible": false,
+    "claims": []
+  },
+  "createdAt": 1783512337098,
+  "updatedAt": 1783512337098,
+  "extra": {
+    "hypothesis": {
+      "statement": "A hybrid architecture using 1000 neutral-atom qubits for computation and 100 silicon-spin qubits for long-term quantum memory (T2 = 10 ms) enables coherent interleaving of subroutines across a 100x-times-longer effective circuit depth.",
+      "rationale": "Synthesised by combining the qubit_neutral_atom + qubit_silicon_spin pattern within research line \"new_qubit_modalities\". The hypothesis is anchored to 1 knowledge-graph concepts to ensure no advance stays isolated.",
+      "supportingConcepts": [
+        "qubit_neutral_atom"
+      ],
+      "predictedImpact": {
+        "metric": "effective_coherence",
+        "direction": "increase",
+        "magnitude": "100x"
+      },
+      "parameters": {
+        "modality": "hybrid_neutral_spin",
+        "physicalQubits": 1000,
+        "T2_s": 0.01,
+        "researchLine": "new_qubit_modalities"
+      },
+      "feasibility": {
+        "tier": "mid_term",
+        "confidence": 0.43,
+        "anchors": [],
+        "ruleResults": [
+          {
+            "tier": "current",
+            "reason": "1000 physical qubits demonstrated (IBM Condor 1121, Atom 1180)"
+          }
+        ],
+        "gaps": [],
+        "costEstimate": {
+          "low": 500000000,
+          "high": 5000000000,
+          "currency": "USD",
+          "note": "Order-of-magnitude estimate; refine with bottom-up EPC + cryogenics + control electronics analysis."
+        },
+        "timelineEstimate": "5-10 years",
+        "resourceProfile": {
+          "physicalQubits": 1000,
+          "logicalQubits": null,
+          "codeDistance": null,
+          "tgateCount": null,
+          "modality": "hybrid_neutral_spin",
+          "cryoRequired": false,
+          "operatingTemp": "10-20mK (dilution refrigerator)"
+        },
+        "crossLinks": {
+          "linkedConcepts": 1,
+          "totalConcepts": 1,
+          "sufficient": true,
+          "note": "Solution is cross-linked to the quantum knowledge graph."
+        },
+        "patentEligible": false
+      },
+      "patentabilityHint": "MAYBE",
+      "proposedExperiments": [
+        "Fabricate a hybrid_neutral_spin test chip and measure T1, T2, and 2-qubit gate fidelity over 1000 randomized benchmarking sequences.",
+        "Characterize the noise spectrum (1/f, quasiparticle, photon shot noise) to identify the dominant decoherence channel.",
+        "Scale to a 2x2 or 3x3 grid and verify cross-talk remains below the QEC threshold."
+      ],
+      "source": "template",
+      "templatePattern": [
+        "qubit_neutral_atom",
+        "qubit_silicon_spin"
+      ],
+      "id": "hyp_4b5ffe83",
+      "researchLine": "new_qubit_modalities",
+      "crossLink": false,
+      "pairedLine": null,
+      "createdAt": 1783512337061,
+      "seedTopic": "qubit_nv_center"
+    },
+    "routing": {
+      "line": "new_qubit_modalities",
+      "crossLink": false,
+      "seedTopic": "algo_qsvt"
+    }
+  },
+  "files": {
+    "markdown": "main.md"
+  }
+}

package/research/hypotheses/new_qubit_modalities/doc_26180f52/main.md

@@ -0,0 +1,60 @@
+# A fluxonium-on-sapphire qubit with T1 = 1000 ms and 2-qubit gate fidelity of 99.9% achieves a 3x-fold coherence improvem
+
+**ID:** hyp_1da40c32
+**Research Line:** new_qubit_modalities
+**Source:** template
+**Created:** 2026-07-08T12:18:40.695Z
+
+## Research Line: New Qubit Modalities
+
+Develop qubit platforms with longer coherence, higher gate fidelity, lower cost, and better scalability.
+
+## Statement
+
+A fluxonium-on-sapphire qubit with T1 = 1000 ms and 2-qubit gate fidelity of 99.9% achieves a 3x-fold coherence improvement over state-of-the-art transmons while retaining CMOS-compatible fabrication, enabling deeper circuits on 100-qubit processors without QEC.
+
+## Rationale
+
+Synthesised by combining the qubit_fluxonium + qubit_transmon pattern within research line "new_qubit_modalities". The hypothesis is anchored to 2 knowledge-graph concepts to ensure no advance stays isolated.
+
+## Supporting Concepts (Cross-Links)
+
+> quantum-spherifier principle: every hypothesis must cross-link to the KG — nothing stays isolated.
+
+- qubit_fluxonium
+- qubit_transmon
+
+## Predicted Impact
+
+Metric: **T1** — increase by 3x
+
+## Feasibility Assessment
+
+Tier: **mid_term** (confidence 0.59)
+
+### Resource Anchors
+
+
+### Identified Gaps
+
+
+### Resource Profile
+
+Physical qubits: 100
+Logical qubits: —
+Code distance: —
+Modality: superconducting_fluxonium
+Operating temp: 10-20mK (dilution refrigerator)
+
+### Cross-Link Verification
+
+✓ Solution is cross-linked to 2 KG concept(s).
+
+## Proposed Experiments
+
+- Fabricate a superconducting_fluxonium test chip and measure T1, T2, and 2-qubit gate fidelity over 1000 randomized benchmarking sequences.
+- Characterize the noise spectrum (1/f, quasiparticle, photon shot noise) to identify the dominant decoherence channel.
+- Scale to a 2x2 or 3x3 grid and verify cross-talk remains below the QEC threshold.
+
+## Candidate Patent Claims
+

package/research/hypotheses/new_qubit_modalities/doc_26180f52/manifest.json

@@ -0,0 +1,139 @@
+{
+  "id": "doc_26180f52",
+  "version": "1.0",
+  "title": "A fluxonium-on-sapphire qubit with T1 = 1000 ms and 2-qubit gate fidelity of 99.9% achieves a 3x-fol",
+  "category": "hypotheses",
+  "topic": "new_qubit_modalities",
+  "researchLine": "new_qubit_modalities",
+  "tags": [
+    "qubits",
+    "intermediate_result"
+  ],
+  "references": [
+    "qubit_fluxonium",
+    "qubit_transmon"
+  ],
+  "crossLinks": [
+    {
+      "id": "doc_0035ce8c",
+      "shared": 2,
+      "relationship": "builds_on"
+    },
+    {
+      "id": "doc_0705eed0",
+      "shared": 1,
+      "relationship": "related"
+    },
+    {
+      "id": "doc_0894efe7",
+      "shared": 2,
+      "relationship": "builds_on"
+    },
+    {
+      "id": "doc_0929ce83",
+      "shared": 1,
+      "relationship": "related"
+    },
+    {
+      "id": "doc_0cfcfcbe",
+      "shared": 1,
+      "relationship": "related"
+    }
+  ],
+  "patent": {
+    "eligible": false,
+    "claims": []
+  },
+  "createdAt": 1783513120769,
+  "updatedAt": 1783513120769,
+  "extra": {
+    "hypothesis": {
+      "statement": "A fluxonium-on-sapphire qubit with T1 = 1000 ms and 2-qubit gate fidelity of 99.9% achieves a 3x-fold coherence improvement over state-of-the-art transmons while retaining CMOS-compatible fabrication, enabling deeper circuits on 100-qubit processors without QEC.",
+      "rationale": "Synthesised by combining the qubit_fluxonium + qubit_transmon pattern within research line \"new_qubit_modalities\". The hypothesis is anchored to 2 knowledge-graph concepts to ensure no advance stays isolated.",
+      "supportingConcepts": [
+        "qubit_fluxonium",
+        "qubit_transmon"
+      ],
+      "predictedImpact": {
+        "metric": "T1",
+        "direction": "increase",
+        "magnitude": "3x"
+      },
+      "parameters": {
+        "modality": "superconducting_fluxonium",
+        "T1_s": 1,
+        "gate2qFidelity": 0.999,
+        "physicalQubits": 100,
+        "researchLine": "new_qubit_modalities"
+      },
+      "feasibility": {
+        "tier": "mid_term",
+        "confidence": 0.59,
+        "anchors": [],
+        "ruleResults": [
+          {
+            "tier": "current",
+            "reason": "100 physical qubits well within current capability"
+          },
+          {
+            "tier": "current",
+            "reason": "2Q fidelity 99.90% excellent (Quantinuum H2: 99.87%)"
+          },
+          {
+            "tier": "current",
+            "reason": "T1=1000.0ms within superconducting / neutral atom range"
+          }
+        ],
+        "gaps": [],
+        "costEstimate": {
+          "low": 500000000,
+          "high": 5000000000,
+          "currency": "USD",
+          "note": "Order-of-magnitude estimate; refine with bottom-up EPC + cryogenics + control electronics analysis."
+        },
+        "timelineEstimate": "5-10 years",
+        "resourceProfile": {
+          "physicalQubits": 100,
+          "logicalQubits": null,
+          "codeDistance": null,
+          "tgateCount": null,
+          "modality": "superconducting_fluxonium",
+          "cryoRequired": false,
+          "operatingTemp": "10-20mK (dilution refrigerator)"
+        },
+        "crossLinks": {
+          "linkedConcepts": 2,
+          "totalConcepts": 2,
+          "sufficient": true,
+          "note": "Solution is cross-linked to the quantum knowledge graph."
+        },
+        "patentEligible": false
+      },
+      "patentabilityHint": "MAYBE",
+      "proposedExperiments": [
+        "Fabricate a superconducting_fluxonium test chip and measure T1, T2, and 2-qubit gate fidelity over 1000 randomized benchmarking sequences.",
+        "Characterize the noise spectrum (1/f, quasiparticle, photon shot noise) to identify the dominant decoherence channel.",
+        "Scale to a 2x2 or 3x3 grid and verify cross-talk remains below the QEC threshold."
+      ],
+      "source": "template",
+      "templatePattern": [
+        "qubit_fluxonium",
+        "qubit_transmon"
+      ],
+      "id": "hyp_1da40c32",
+      "researchLine": "new_qubit_modalities",
+      "crossLink": false,
+      "pairedLine": null,
+      "createdAt": 1783513120695,
+      "seedTopic": "qubit_nv_center"
+    },
+    "routing": {
+      "line": "new_qubit_modalities",
+      "crossLink": false,
+      "seedTopic": "qubit_fluxonium"
+    }
+  },
+  "files": {
+    "markdown": "main.md"
+  }
+}

package/research/hypotheses/new_qubit_modalities/doc_264f31a7/main.md

@@ -0,0 +1,59 @@
+# A 1000-qubit silicon spin-qubit processor fabricated on Intel 3 CMOS nodes, with 2-qubit gate fidelity 99.9% and dot pit
+
+**ID:** hyp_87098c05
+**Research Line:** new_qubit_modalities
+**Source:** template
+**Created:** 2026-07-08T12:16:16.539Z
+
+## Research Line: New Qubit Modalities
+
+Develop qubit platforms with longer coherence, higher gate fidelity, lower cost, and better scalability.
+
+## Statement
+
+A 1000-qubit silicon spin-qubit processor fabricated on Intel 3 CMOS nodes, with 2-qubit gate fidelity 99.9% and dot pitch of 100 nm, achieves 1000000 qubits/mm² — a 1000x-x density improvement over transmon processors — at cryogenic cost $1M.
+
+## Rationale
+
+Synthesised by combining the qubit_silicon_spin + qubit_transmon pattern within research line "new_qubit_modalities". The hypothesis is anchored to 1 knowledge-graph concepts to ensure no advance stays isolated.
+
+## Supporting Concepts (Cross-Links)
+
+> quantum-spherifier principle: every hypothesis must cross-link to the KG — nothing stays isolated.
+
+- qubit_transmon
+
+## Predicted Impact
+
+Metric: **qubit_density** — increase by 1000x
+
+## Feasibility Assessment
+
+Tier: **mid_term** (confidence 0.51)
+
+### Resource Anchors
+
+
+### Identified Gaps
+
+
+### Resource Profile
+
+Physical qubits: 1000
+Logical qubits: —
+Code distance: —
+Modality: silicon_spin_qubit
+Operating temp: 10-20mK (dilution refrigerator)
+
+### Cross-Link Verification
+
+✓ Solution is cross-linked to 1 KG concept(s).
+
+## Proposed Experiments
+
+- Fabricate a silicon_spin_qubit test chip and measure T1, T2, and 2-qubit gate fidelity over 1000 randomized benchmarking sequences.
+- Characterize the noise spectrum (1/f, quasiparticle, photon shot noise) to identify the dominant decoherence channel.
+- Scale to a 2x2 or 3x3 grid and verify cross-talk remains below the QEC threshold.
+
+## Candidate Patent Claims
+