pulseed 0.5.3 → 0.6.0

package/dist/platform/soil/sqlite-repository-search.js

@@ -0,0 +1,367 @@
+import { cosineSimilarity } from "../knowledge/embedding-client.js";
+import { SoilSearchRequestSchema, } from "./contracts.js";
+import { buildSnippet, decodeEmbedding, dedupeCandidates, parseJsonObject, unique, } from "./sqlite-repository-helpers.js";
+function hasExplicitMetadataFilter(request) {
+    const recordFilter = request.record_filter;
+    const pageFilter = request.page_filter;
+    return Boolean(recordFilter.record_ids?.length ||
+        recordFilter.record_keys?.length ||
+        recordFilter.record_types?.length ||
+        recordFilter.statuses?.length ||
+        recordFilter.goal_ids?.length ||
+        recordFilter.task_ids?.length ||
+        recordFilter.source_types?.length ||
+        recordFilter.source_ids?.length ||
+        recordFilter.valid_at ||
+        recordFilter.updated_after ||
+        recordFilter.updated_before ||
+        pageFilter.page_ids?.length ||
+        pageFilter.soil_ids?.length ||
+        pageFilter.routes?.length ||
+        pageFilter.kinds?.length ||
+        pageFilter.page_statuses?.length ||
+        pageFilter.relative_paths?.length);
+}
+export function buildRecordFilterSql(request, params) {
+    const clauses = [];
+    const filter = request.record_filter;
+    if (filter.active_only) {
+        clauses.push("r.is_active = 1");
+    }
+    if (filter.record_ids?.length) {
+        clauses.push(`r.record_id IN (${filter.record_ids.map(() => "?").join(", ")})`);
+        params.push(...filter.record_ids);
+    }
+    if (filter.record_keys?.length) {
+        clauses.push(`r.record_key IN (${filter.record_keys.map(() => "?").join(", ")})`);
+        params.push(...filter.record_keys);
+    }
+    if (filter.record_types?.length) {
+        clauses.push(`r.record_type IN (${filter.record_types.map(() => "?").join(", ")})`);
+        params.push(...filter.record_types);
+    }
+    if (filter.statuses?.length) {
+        clauses.push(`r.status IN (${filter.statuses.map(() => "?").join(", ")})`);
+        params.push(...filter.statuses);
+    }
+    if (filter.goal_ids?.length) {
+        clauses.push(`r.goal_id IN (${filter.goal_ids.map(() => "?").join(", ")})`);
+        params.push(...filter.goal_ids);
+    }
+    if (filter.task_ids?.length) {
+        clauses.push(`r.task_id IN (${filter.task_ids.map(() => "?").join(", ")})`);
+        params.push(...filter.task_ids);
+    }
+    if (filter.source_types?.length) {
+        clauses.push(`r.source_type IN (${filter.source_types.map(() => "?").join(", ")})`);
+        params.push(...filter.source_types);
+    }
+    if (filter.source_ids?.length) {
+        clauses.push(`r.source_id IN (${filter.source_ids.map(() => "?").join(", ")})`);
+        params.push(...filter.source_ids);
+    }
+    if (filter.valid_at) {
+        clauses.push("(r.valid_from IS NULL OR r.valid_from <= ?)");
+        clauses.push("(r.valid_to IS NULL OR r.valid_to > ?)");
+        params.push(filter.valid_at, filter.valid_at);
+    }
+    if (filter.updated_after) {
+        clauses.push("r.updated_at >= ?");
+        params.push(filter.updated_after);
+    }
+    if (filter.updated_before) {
+        clauses.push("r.updated_at <= ?");
+        params.push(filter.updated_before);
+    }
+    return clauses;
+}
+function buildPageFilterSql(request, params) {
+    const clauses = [];
+    const filter = request.page_filter;
+    if (filter.page_ids?.length) {
+        clauses.push(`p.page_id IN (${filter.page_ids.map(() => "?").join(", ")})`);
+        params.push(...filter.page_ids);
+    }
+    if (filter.soil_ids?.length) {
+        clauses.push(`p.soil_id IN (${filter.soil_ids.map(() => "?").join(", ")})`);
+        params.push(...filter.soil_ids);
+    }
+    if (filter.routes?.length) {
+        clauses.push(`p.route IN (${filter.routes.map(() => "?").join(", ")})`);
+        params.push(...filter.routes);
+    }
+    if (filter.kinds?.length) {
+        clauses.push(`p.kind IN (${filter.kinds.map(() => "?").join(", ")})`);
+        params.push(...filter.kinds);
+    }
+    if (filter.page_statuses?.length) {
+        clauses.push(`p.status IN (${filter.page_statuses.map(() => "?").join(", ")})`);
+        params.push(...filter.page_statuses);
+    }
+    if (filter.relative_paths?.length) {
+        clauses.push(`p.relative_path IN (${filter.relative_paths.map(() => "?").join(", ")})`);
+        params.push(...filter.relative_paths);
+    }
+    return clauses;
+}
+function buildPageExistsSql(recordIdExpr, request, params) {
+    const pagePredicates = buildPageFilterSql(request, params);
+    if (pagePredicates.length === 0) {
+        return [];
+    }
+    return [
+        `EXISTS (
+      SELECT 1
+      FROM soil_page_members spm
+      JOIN soil_pages p ON p.page_id = spm.page_id
+      WHERE spm.record_id = ${recordIdExpr}
+        AND ${pagePredicates.join(" AND ")}
+    )`,
+    ];
+}
+function buildCandidatePageIdSql(recordIdExpr, request, params) {
+    const pagePredicates = buildPageFilterSql(request, params);
+    const baseQuery = pagePredicates.length > 0
+        ? `SELECT spm.page_id
+       FROM soil_page_members spm
+       JOIN soil_pages p ON p.page_id = spm.page_id
+       WHERE spm.record_id = ${recordIdExpr}
+         AND ${pagePredicates.join(" AND ")}
+       ORDER BY CASE WHEN spm.role = 'primary' THEN 0 ELSE 1 END, spm.ordinal, p.relative_path, spm.page_id
+       LIMIT 1`
+        : `SELECT spm.page_id
+       FROM soil_page_members spm
+       WHERE spm.record_id = ${recordIdExpr}
+       ORDER BY CASE WHEN spm.role = 'primary' THEN 0 ELSE 1 END, spm.ordinal, spm.page_id
+       LIMIT 1`;
+    return `(${baseQuery})`;
+}
+export function lookupDirectCandidates(db, input) {
+    const request = SoilSearchRequestSchema.parse(input);
+    if (!request.direct_lookup) {
+        return { request, candidates: [] };
+    }
+    const pageParams = [request.query, request.query, request.query];
+    const pageWhere = ["(soil_id = ? OR relative_path = ? OR page_id = ?)"];
+    pageWhere.push(...buildPageFilterSql(request, pageParams));
+    pageParams.push(request.limit);
+    const pageMatches = db.prepare(`
+    SELECT page_id, soil_id
+    FROM soil_pages p
+    WHERE ${pageWhere.join(" AND ")}
+    LIMIT ?
+  `).all(...pageParams);
+    const recordParams = [request.query, request.query, request.query, request.query];
+    const recordWhere = ["(r.record_id = ? OR r.record_key = ? OR r.soil_id = ? OR r.source_id = ?)"];
+    recordWhere.push(...buildRecordFilterSql(request, recordParams));
+    recordParams.push(request.limit);
+    const recordRows = db.prepare(`
+    SELECT *
+    FROM soil_records r
+    WHERE ${recordWhere.join(" AND ")}
+    LIMIT ?
+  `).all(...recordParams);
+    const pageIdBySoilId = new Map();
+    for (const page of pageMatches) {
+        if (!pageIdBySoilId.has(page.soil_id)) {
+            pageIdBySoilId.set(page.soil_id, page.page_id);
+        }
+    }
+    const firstChunkByRecordId = new Map();
+    const recordIds = unique(recordRows.map((row) => row.record_id));
+    if (recordIds.length > 0) {
+        const chunkRows = db
+            .prepare(`
+        SELECT *
+        FROM soil_chunks
+        WHERE record_id IN (${recordIds.map(() => "?").join(", ")})
+        ORDER BY record_id, chunk_index
+      `)
+            .all(...recordIds);
+        for (const chunk of chunkRows) {
+            if (!firstChunkByRecordId.has(chunk.record_id)) {
+                firstChunkByRecordId.set(chunk.record_id, chunk);
+            }
+        }
+    }
+    const firstPageMemberByPageId = new Map();
+    const pageIds = unique(pageMatches.map((page) => page.page_id));
+    if (pageIds.length > 0) {
+        const pageMemberRows = db
+            .prepare(`
+        SELECT spm.page_id, spm.record_id, sc.chunk_id, sc.chunk_text
+        FROM soil_page_members spm
+        LEFT JOIN soil_chunks sc ON sc.record_id = spm.record_id
+        WHERE spm.page_id IN (${pageIds.map(() => "?").join(", ")})
+        ORDER BY spm.page_id, spm.ordinal, sc.chunk_index
+      `)
+            .all(...pageIds);
+        for (const row of pageMemberRows) {
+            if (!firstPageMemberByPageId.has(row.page_id)) {
+                firstPageMemberByPageId.set(row.page_id, row);
+            }
+        }
+    }
+    const candidates = [];
+    const representedPageIds = new Set();
+    for (const row of recordRows) {
+        const chunk = firstChunkByRecordId.get(row.record_id);
+        const page_id = pageIdBySoilId.get(row.soil_id) ?? null;
+        if (page_id) {
+            representedPageIds.add(page_id);
+        }
+        candidates.push({
+            chunk_id: chunk?.chunk_id ?? `record:${row.record_id}`,
+            record_id: row.record_id,
+            soil_id: row.soil_id,
+            lane: "direct",
+            rank: candidates.length + 1,
+            score: 1,
+            snippet: chunk ? buildSnippet(chunk.chunk_text, request.query) : row.summary ?? row.title,
+            page_id,
+            metadata_json: parseJsonObject(row.metadata_json),
+        });
+    }
+    for (const page of pageMatches) {
+        if (representedPageIds.has(page.page_id))
+            continue;
+        representedPageIds.add(page.page_id);
+        const member = firstPageMemberByPageId.get(page.page_id);
+        candidates.push({
+            chunk_id: member?.chunk_id ?? `page:${page.page_id}`,
+            record_id: member?.record_id ?? `page:${page.page_id}`,
+            soil_id: page.soil_id,
+            lane: "direct",
+            rank: candidates.length + 1,
+            score: 1,
+            snippet: member?.chunk_text ? buildSnippet(member.chunk_text, request.query) : page.soil_id,
+            page_id: page.page_id,
+            metadata_json: {},
+        });
+    }
+    return { request, candidates: candidates.slice(0, request.limit) };
+}
+export function searchLexicalCandidates(db, input) {
+    const request = SoilSearchRequestSchema.parse(input);
+    const pageIdParams = [];
+    const pageIdSql = buildCandidatePageIdSql("r.record_id", request, pageIdParams);
+    const whereParams = [];
+    const where = ["soil_chunk_fts MATCH ?"];
+    where.push(...buildRecordFilterSql(request, whereParams));
+    where.push(...buildPageExistsSql("r.record_id", request, whereParams));
+    const params = [...pageIdParams, request.query, ...whereParams, request.lexical_top_k];
+    const rows = db.prepare(`
+    SELECT
+      soil_chunk_fts.chunk_id AS chunk_id,
+      soil_chunk_fts.record_id AS record_id,
+      soil_chunk_fts.soil_id AS soil_id,
+      ${pageIdSql} AS page_id,
+      r.title AS title,
+      r.summary AS summary,
+      sc.chunk_text AS chunk_text,
+      bm25(soil_chunk_fts, 8.0, 5.0, 3.0, 1.0) AS score
+    FROM soil_chunk_fts
+    JOIN soil_chunks sc ON sc.chunk_id = soil_chunk_fts.chunk_id
+    JOIN soil_records r ON r.record_id = soil_chunk_fts.record_id
+    WHERE ${where.join(" AND ")}
+    ORDER BY score
+    LIMIT ?
+  `).all(...params);
+    const candidates = rows.map((row, index) => ({
+        chunk_id: row.chunk_id,
+        record_id: row.record_id,
+        soil_id: row.soil_id,
+        page_id: row.page_id,
+        lane: "lexical",
+        rank: index + 1,
+        score: -1 * row.score,
+        snippet: buildSnippet(row.chunk_text, request.query),
+        metadata_json: { title: row.title, summary: row.summary },
+    }));
+    return dedupeCandidates(candidates, request.limit);
+}
+export function searchDenseCandidates(db, input, excludedRecordIds) {
+    const request = SoilSearchRequestSchema.parse(input);
+    if (!request.query_embedding?.length) {
+        return [];
+    }
+    const pageIdParams = [];
+    const pageIdSql = buildCandidatePageIdSql("r.record_id", request, pageIdParams);
+    const params = [];
+    const where = buildRecordFilterSql(request, params);
+    where.push(...buildPageExistsSql("r.record_id", request, params));
+    const denseCandidateRecordIds = request.dense_candidate_record_ids ? unique(request.dense_candidate_record_ids) : null;
+    if (denseCandidateRecordIds?.length === 0) {
+        return [];
+    }
+    if (denseCandidateRecordIds) {
+        where.push(`r.record_id IN (${denseCandidateRecordIds.map(() => "?").join(", ")})`);
+        params.push(...denseCandidateRecordIds);
+    }
+    if (excludedRecordIds.length > 0) {
+        where.push(`r.record_id NOT IN (${excludedRecordIds.map(() => "?").join(", ")})`);
+        params.push(...excludedRecordIds);
+    }
+    if (request.query_embedding_model) {
+        where.push("se.model = ?");
+        params.push(request.query_embedding_model);
+    }
+    where.push(`
+    NOT EXISTS (
+      SELECT 1
+      FROM soil_embeddings newer
+      WHERE newer.chunk_id = se.chunk_id
+        AND newer.model = se.model
+        AND newer.embedding_version > se.embedding_version
+    )
+  `);
+    const queryParams = [...pageIdParams, ...params];
+    const rows = db.prepare(`
+    SELECT
+      se.chunk_id,
+      se.model,
+      se.embedding_version,
+      se.encoding,
+      se.embedding,
+      se.embedded_at,
+      sc.record_id,
+      sc.soil_id,
+      sc.chunk_text,
+      r.title,
+      r.summary,
+      ${pageIdSql} AS page_id
+    FROM soil_embeddings se
+    JOIN soil_chunks sc ON sc.chunk_id = se.chunk_id
+    JOIN soil_records r ON r.record_id = sc.record_id
+    ${where.length > 0 ? `WHERE ${where.join(" AND ")}` : ""}
+  `).all(...queryParams);
+    const scored = [];
+    for (const row of rows) {
+        try {
+            scored.push({
+                row,
+                similarity: cosineSimilarity(request.query_embedding, decodeEmbedding(row)),
+            });
+        }
+        catch {
+            continue;
+        }
+    }
+    scored.sort((left, right) => right.similarity - left.similarity);
+    const candidates = scored.slice(0, request.dense_top_k).map(({ row, similarity }, index) => ({
+        chunk_id: row.chunk_id,
+        record_id: row.record_id,
+        soil_id: row.soil_id,
+        page_id: row.page_id,
+        lane: "dense",
+        rank: index + 1,
+        score: similarity,
+        snippet: buildSnippet(row.chunk_text, request.query),
+        metadata_json: { model: row.model, embedding_version: row.embedding_version, title: row.title, summary: row.summary },
+    }));
+    return dedupeCandidates(candidates, request.limit);
+}
+export function shouldRunDenseSearch(request, lexicalRecordIds) {
+    return lexicalRecordIds.length > 0 || hasExplicitMetadataFilter(request);
+}
+//# sourceMappingURL=sqlite-repository-search.js.map

package/dist/platform/soil/sqlite-repository-search.js.map

@@ -0,0 +1 @@
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package/dist/platform/soil/sqlite-repository-storage.d.ts

@@ -0,0 +1,8 @@
+import { type SoilMutationInput, type SoilPageMember } from "./contracts.js";
+import { type SqliteDatabase } from "./sqlite-repository-helpers.js";
+export declare function initializeSoilSqlite(db: SqliteDatabase): void;
+export declare function initializeReadonlySoilSqlite(db: SqliteDatabase): void;
+export declare function applySoilMutation(db: SqliteDatabase, input: SoilMutationInput): void;
+export declare function replaceSoilPageMembers(db: SqliteDatabase, pageId: string, members: SoilPageMember[]): void;
+export declare function loadOpenEmbeddingReindexRecordIds(db: SqliteDatabase): string[];
+//# sourceMappingURL=sqlite-repository-storage.d.ts.map

package/dist/platform/soil/sqlite-repository-storage.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"sqlite-repository-storage.d.ts","sourceRoot":"","sources":["../../../src/platform/soil/sqlite-repository-storage.ts"],"names":[],"mappings":"AAEA,OAAO,EAIL,KAAK,iBAAiB,EACtB,KAAK,cAAc,EACpB,MAAM,gBAAgB,CAAC;AACxB,OAAO,EAKL,KAAK,cAAc,EAEpB,MAAM,gCAAgC,CAAC;AAExC,wBAAgB,oBAAoB,CAAC,EAAE,EAAE,cAAc,GAAG,IAAI,CAI7D;AAED,wBAAgB,4BAA4B,CAAC,EAAE,EAAE,cAAc,GAAG,IAAI,CAErE;AAED,wBAAgB,iBAAiB,CAAC,EAAE,EAAE,cAAc,EAAE,KAAK,EAAE,iBAAiB,GAAG,IAAI,CA8MpF;AAED,wBAAgB,sBAAsB,CAAC,EAAE,EAAE,cAAc,EAAE,MAAM,EAAE,MAAM,EAAE,OAAO,EAAE,cAAc,EAAE,GAAG,IAAI,CAY1G;AAED,wBAAgB,iCAAiC,CAAC,EAAE,EAAE,cAAc,GAAG,MAAM,EAAE,CAY9E"}