port-nuker 1.0.1 → 1.0.4

package/.agent/skills/skills/loki-mode/CHANGELOG.md

@@ -1,1822 +0,0 @@
-# Changelog
-
-All notable changes to Loki Mode will be documented in this file.
-
-The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/),
-and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
-
-## [2.35.1] - 2026-01-11
-
-### Validated - External Research Audit
-
-**External resources analyzed (11 sources):**
-- [extremeclarity/claude-plugins/worldview](https://github.com/extremeclarity/claude-plugins/tree/master/plugins/worldview) - Context persistence plugin
-- [trails.pieterma.es](https://trails.pieterma.es/) - Context management
-- [Yeachan-Heo/oh-my-claude-sisyphus](https://github.com/Yeachan-Heo/oh-my-claude-sisyphus) - Multi-agent orchestration
-- [mihaileric.com - The Emperor Has No Clothes](https://www.mihaileric.com/The-Emperor-Has-No-Clothes/) - AI agent architecture insights
-- [sawirstudio/effectphp](https://github.com/sawirstudio/effectphp) - Functional effects library
-- [camel-ai.org/SETA](https://www.camel-ai.org/blogs/seta-scaling-environments-for-terminal-agents) - Terminal agent research
-- [rush86999/atom](https://github.com/rush86999/atom) - Workflow automation platform
-- [penberg.org/disaggregated-agentfs](https://penberg.org/blog/disaggregated-agentfs.html) - Storage architecture
-- [onmax/npm-agentskills](https://github.com/onmax/npm-agentskills) - SKILL.md standard
-- [xrip/tinycode](https://github.com/xrip/tinycode) - Minimal AI assistant
-- [akz4ol/agentlint](https://github.com/akz4ol/agentlint) - Agent security scanner
-
-**Audit Outcome: No Critical Features Missing**
-
-Loki Mode already implements more comprehensive versions of:
-
-| Feature | Loki Mode | Best External |
-|---------|-----------|---------------|
-| Agent Types | 37 specialized | Sisyphus: 11 |
-| Memory System | Episodic/semantic/procedural + cross-project | Worldview: single-project |
-| Recovery | RARV + circuit breakers + git checkpoints | Sisyphus: session recovery |
-| Quality Gates | 7 gates + blind review + devil's advocate | None comparable |
-| Enterprise Security | Audit logging, staged autonomy, path restrictions | Atom: BYOK |
-| Benchmarks | 98.78% HumanEval, 99.67% SWE-bench | SETA: 46.5% Terminal-Bench |
-
-**Potential additions evaluated but rejected:**
-- LSP/AST integration (Sisyphus) - specialized feature, adds complexity without core value
-- Knowledge graph (Atom) - complex infrastructure, overkill for CLI skill
-- WAL-based storage (AgentFS) - over-engineering; git checkpoints serve same purpose
-
-**Validation:**
-- All existing tests pass (8/8 bootstrap, 8/8 task-queue)
-- SKILL.md syntax valid
-- run.sh functioning correctly
-- Example PRDs available and documented
-
----
-
-## [2.35.0] - 2026-01-08
-
-### Added - Anthropic Agent Harness Patterns & Claude Agent SDK
-
-**Sources:**
-- [Effective Harnesses for Long-Running Agents](https://www.anthropic.com/engineering/effective-harnesses-for-long-running-agents) - Anthropic Engineering
-- [Claude Agent SDK Overview](https://platform.claude.com/docs/en/agent-sdk/overview) - Anthropic Platform
-
-**New Patterns:**
-
-1. **One Feature at a Time** (Rule #7 in Core Autonomy)
-   - Work on exactly one feature per iteration
-   - Complete, commit, verify before moving to next
-   - Prevents over-commitment and ensures clean progress tracking
-
-2. **E2E Browser Testing with Playwright MCP**
-   - Features NOT complete until verified via browser automation
-   - New Essential Pattern: `Playwright MCP -> Automate browser -> Verify UI features visually`
-   - Detailed verification flow added to SKILL.md
-   - Note: Playwright cannot detect browser-native alert modals
-
-3. **Advanced Task Tool Parameters**
-   - `run_in_background`: Returns output_file path, output truncated to 30K chars
-   - `resume`: Continue interrupted agents with full context
-   - Use cases: Context limits, rate limits, multi-session work
-
-### Fixed
-
-- Release workflow: Use gh CLI instead of softprops action for atomic release creation
-
----
-
-## [2.33.0] - 2026-01-08
-
-### Added - AWS Bedrock Routing Mode Optimization
-
-**Source:** [AWS Multi-Agent Orchestration Guidance](https://aws.amazon.com/solutions/guidance/multi-agent-orchestration-on-aws/)
-
-**New Pattern: Routing Mode Optimization**
-
-Two dispatch modes based on task complexity - reduces latency for simple tasks:
-
-| Mode | When to Use | Behavior |
-|------|-------------|----------|
-| **Direct Routing** | Simple, single-domain tasks | Route directly to specialist agent, skip orchestration |
-| **Supervisor Mode** | Complex, multi-step tasks | Full decomposition, coordination, result synthesis |
-
-**Key Insights from AWS:**
-- Simple tasks → Direct dispatch to Haiku (faster, minimal context)
-- Complex tasks → Full supervisor orchestration (Sonnet coordination)
-- Context depth varies by routing mode (avoid confusing simple agents with complex history)
-- 10-agent limit per supervisor (validates our MAX_PARALLEL_AGENTS=10)
-
-**Files Updated:**
-- `SKILL.md` - Added Routing Mode pattern to Essential Patterns and new section with decision logic
-- `ACKNOWLEDGEMENTS.md` - Added AWS Bedrock section with 4 source citations
-
----
-
-## [2.32.1] - 2026-01-08
-
-### Fixed - Critical Bug Fixes
-
-**5 bugs fixed in autonomy/run.sh:**
-
-| Bug | Symptom | Root Cause | Fix |
-|-----|---------|------------|-----|
-| Dashboard crash on edit | Dashboard killed mid-session | Bash reads scripts incrementally; editing corrupts execution | Self-copy to `/tmp/loki-run-PID.sh` before exec |
-| Parse error: `name 'pattern' is not defined` | Python errors during PRD processing | PRD content with quotes breaking Python string literals | Pass context via `LOKI_CONTEXT` env var |
-| `datetime.utcnow()` deprecated | DeprecationWarning spam in logs | Python 3.12+ deprecation | Use `datetime.now(timezone.utc)` |
-| `log_warning: command not found` | Errors during resource monitoring | Function name mismatch (`log_warn` vs `log_warning`) | Added `log_warning()` as alias |
-| CPU showing 45226498% | False resource warnings | Summed process CPU instead of system-wide | Parse idle% from `top` header |
-
-**New Safeguards:**
-- **Protected Files section** in SKILL.md - Documents files that shouldn't be edited during active sessions
-- **Rule #6** in Core Autonomy Rules - "NEVER edit `autonomy/run.sh` while running"
-
-### Added
-
-- **ACKNOWLEDGEMENTS.md** - Comprehensive citations for 50+ research sources:
-  - Anthropic (8 papers)
-  - Google DeepMind (7 papers)
-  - OpenAI (12 resources)
-  - Academic papers (9)
-  - HN discussions (7) and Show HN projects (4)
-  - Individual contributors
-
-- **README.md** - Enhanced acknowledgements section with top research papers
-
----
-
-## [2.32.0] - 2026-01-07
-
-### Added - Hacker News Production Patterns
-
-**Sources analyzed:**
-- [What Actually Works in Production for Autonomous Agents](https://news.ycombinator.com/item?id=44623207)
-- [Coding with LLMs in Summer 2025](https://news.ycombinator.com/item?id=44623953)
-- [Superpowers: How I'm Using Coding Agents](https://news.ycombinator.com/item?id=45547344)
-- [Claude Code Experience After Two Weeks](https://news.ycombinator.com/item?id=44596472)
-- [AI Agent Benchmarks Are Broken](https://news.ycombinator.com/item?id=44531697)
-- [How to Orchestrate Multi-Agent Workflows](https://news.ycombinator.com/item?id=45955997)
-
-**New Reference File: `references/production-patterns.md`**
-Battle-tested patterns from practitioners:
-- **Human-in-the-Loop (HITL)**: "Zero companies without humans in loop"
-- **Narrow Scope Wins**: 3-5 steps max before human review
-- **Confidence-Based Routing**: Auto-approve high confidence, escalate low
-- **Deterministic Outer Loops**: Rule-based validation, not LLM-judged
-- **Context Curation**: Manual selection beats automatic RAG
-- **Sub-Agents for Context Isolation**: Prevent token waste
-- **Event-Driven Orchestration**: Async, decoupled coordination
-- **Policy-First Enforcement**: Runtime governance
-
-**New Patterns in SKILL.md:**
-- **Narrow Scope**: `3-5 steps max -> Human review -> Continue`
-- **Context Curation**: `Manual selection -> Focused context -> Fresh per task`
-- **Deterministic Validation**: `LLM output -> Rule-based checks -> Retry or approve`
-
-**New Section: Production Patterns (HN 2025)**
-- Narrow Scope Wins with task constraints
-- Confidence-Based Routing thresholds
-- Deterministic Outer Loops workflow
-- Context Engineering principles
-- Sub-Agents for Context Isolation
-
-### Key Practitioner Insights
-
-| Insight | Source | Implementation |
-|---------|--------|----------------|
-| "Zero companies without HITL" | Amazon AI engineer | Confidence thresholds |
-| "3-5 steps max before review" | Multiple practitioners | Task scope constraints |
-| "Deterministic validation wins" | Production teams | Rule-based outer loops |
-| "Less context is more" | Simon Willison | Context curation |
-| "LLM-as-judge has blind spots" | Benchmark discussion | Objective metrics only |
-
-### Changed
-- SKILL.md: Updated version to 2.32.0, ~600 lines
-- SKILL.md: Added 3 new patterns to Essential Patterns
-- SKILL.md: Added Production Patterns (HN 2025) section
-- References: Added production-patterns.md to table
-
----
-
-## [2.31.0] - 2026-01-07
-
-### Added - DeepMind + Anthropic Research Patterns
-
-**Research sources analyzed:**
-
-**Google DeepMind:**
-- [SIMA 2: Generalist AI Agent](https://deepmind.google/blog/sima-2-an-agent-that-plays-reasons-and-learns-with-you-in-virtual-3d-worlds/)
-- [Gemini Robotics 1.5](https://deepmind.google/blog/gemini-robotics-15-brings-ai-agents-into-the-physical-world/)
-- [Dreamer 4: World Model Training](https://danijar.com/project/dreamer4/)
-- [Scalable AI Safety via Debate](https://deepmind.google/research/publications/34920/)
-- [Amplified Oversight](https://deepmindsafetyresearch.medium.com/human-ai-complementarity-a-goal-for-amplified-oversight-0ad8a44cae0a)
-- [Technical AGI Safety Approach](https://arxiv.org/html/2504.01849v1)
-
-**Anthropic:**
-- [Constitutional AI](https://www.anthropic.com/research/constitutional-ai-harmlessness-from-ai-feedback)
-- [Building Effective Agents](https://www.anthropic.com/research/building-effective-agents)
-- [Claude Code Best Practices](https://www.anthropic.com/engineering/claude-code-best-practices)
-- [Sleeper Agents Detection](https://www.anthropic.com/research/probes-catch-sleeper-agents)
-- [Alignment Faking](https://www.anthropic.com/research/alignment-faking)
-
-**New Reference File: `references/lab-research-patterns.md`**
-Comprehensive guide covering:
-- **World Model Training** (Dreamer 4): Train agents inside simulation for safety
-- **Self-Improvement Loop** (SIMA 2): Gemini-based teacher + learned reward model
-- **Hierarchical Reasoning** (Gemini Robotics): High-level planner + low-level executor
-- **Scalable Oversight via Debate**: Pit AI capabilities against each other
-- **Constitutional AI**: Principles-based self-critique and revision
-- **Sleeper Agent Detection**: Defection probes for anomaly detection
-- **Explore-Plan-Code**: Research -> Plan -> Implement workflow
-- **Extended Thinking Levels**: think < think hard < ultrathink
-
-**New Patterns in SKILL.md:**
-- **Explore-Plan-Code**: `Research files -> Create plan (NO CODE) -> Execute plan`
-- **Constitutional Self-Critique**: `Generate -> Critique against principles -> Revise`
-- **Hierarchical Reasoning**: `High-level planner -> Skill selection -> Local executor`
-- **Debate Verification**: `Proponent defends -> Opponent challenges -> Synthesize`
-
-**New Sections in SKILL.md:**
-- **Constitutional AI Principles**: Loki Mode constitution with 8 core principles
-- **Debate-Based Verification**: For architecture decisions and security changes
-
-### Changed
-- SKILL.md: Updated version to 2.31.0, ~530 lines
-- SKILL.md: Added 4 new patterns to Essential Patterns section
-- SKILL.md: Added Constitutional AI Principles section
-- SKILL.md: Added Debate-Based Verification section
-- References: Added lab-research-patterns.md to table
-
-### Research Insights Applied
-
-| Lab | Key Insight | Loki Mode Implementation |
-|-----|-------------|-------------------------|
-| DeepMind | "Hierarchical reasoning separates planning from execution" | Orchestrator = planner, agents = executors |
-| DeepMind | "Debate can verify beyond human capability" | Debate verification for critical changes |
-| Anthropic | "Self-critique against principles is more robust" | Constitutional AI workflow |
-| Anthropic | "Explore before planning, plan before coding" | Explore-Plan-Code pattern |
-| Anthropic | "Extended thinking levels for complexity" | Thinking mode in model selection |
-
----
-
-## [2.30.0] - 2026-01-07
-
-### Added - OpenAI Agent Patterns
-
-**Research sources analyzed:**
-- [OpenAI Agents SDK](https://openai.github.io/openai-agents-python/) - Core primitives
-- [Practical Guide to Building Agents](https://cdn.openai.com/business-guides-and-resources/a-practical-guide-to-building-agents.pdf)
-- [Building Agents Track](https://developers.openai.com/tracks/building-agents/)
-- [AGENTS.md Specification](https://agents.md/)
-- [Deep Research System Card](https://cdn.openai.com/deep-research-system-card.pdf)
-- [Chain of Thought Monitoring](https://openai.com/index/chain-of-thought-monitoring/)
-- [Agentic AI Foundation](https://openai.com/index/agentic-ai-foundation/)
-
-**New Reference File: `references/openai-patterns.md`**
-Comprehensive guide covering:
-- **Tracing Spans Architecture**: Hierarchical event tracking with span types (agent_span, generation_span, function_span, guardrail_span, handoff_span)
-- **Guardrails & Tripwires**: Input/output validation with early termination
-- **Handoff Callbacks**: on_handoff for data preparation during agent transfers
-- **Multi-Tiered Fallbacks**: Model-level and workflow-level failure recovery
-- **Confidence-Based Human Escalation**: Threshold-based intervention triggers
-- **AGENTS.md Integration**: Read target project context using AAIF standard
-- **Session State Management**: Automatic state persistence
-
-**New Patterns in SKILL.md:**
-- **Guardrails**: `Input Guard (BLOCK) -> Execute -> Output Guard (VALIDATE)`
-- **Tripwires**: `Validation fails -> Halt execution -> Escalate or retry`
-- **Fallbacks**: `Try primary -> Model fallback -> Workflow fallback -> Human escalation`
-- **Handoff Callbacks**: `on_handoff -> Pre-fetch context -> Transfer with data`
-
-**Enhanced Quality Gates:**
-- Added Input Guardrails (validate scope, detect injection, check constraints)
-- Added Output Guardrails (validate code quality, spec compliance, no secrets)
-- Guardrails execution modes: Blocking vs Parallel
-- Tripwire handling with exception hierarchy
-
-**Human Escalation Triggers:**
-| Trigger | Action |
-|---------|--------|
-| retry_count > 3 | Pause and escalate |
-| domain in [payments, auth, pii] | Require approval |
-| confidence_score < 0.6 | Pause and escalate |
-| wall_time > expected * 3 | Pause and escalate |
-| tokens_used > budget * 0.8 | Pause and escalate |
-
-### Changed
-- SKILL.md: Updated version to 2.30.0, ~470 lines
-- SKILL.md: Added 4 new patterns to Essential Patterns section
-- SKILL.md: Added Multi-Tiered Fallback System section
-- SKILL.md: Added AGENTS.md Integration section
-- SKILL.md: Enhanced Quality Gates with guardrails and tripwires
-- quality-control.md: Added Guardrails & Tripwires System section with layered defense
-- tool-orchestration.md: Added Tracing Spans Architecture section
-- tool-orchestration.md: Added OpenAI sources to references
-
-### OpenAI Key Insights Applied
-| Insight | Implementation |
-|---------|----------------|
-| "Layered defense with multiple guardrails" | 4-layer guardrail system |
-| "Tripwires halt execution immediately" | Exception hierarchy for validation failures |
-| "on_handoff for data preparation" | Pre-fetch context during agent transfers |
-| "Model fallback chains" | opus -> sonnet -> haiku on failure |
-| "Confidence-based escalation" | Threshold-triggered human review |
-| "AGENTS.md for agent instructions" | Read target project's AGENTS.md |
-
----
-
-## [2.29.0] - 2026-01-07
-
-### Added - Research-Backed Multi-Agent Best Practices
-
-**Research sources analyzed (15+ papers/guides):**
-- [Anthropic: Building Effective Agents](https://www.anthropic.com/research/building-effective-agents)
-- [Stanford/Harvard: Demo-to-Deployment Gap](https://www.marktechpost.com/2025/12/24/)
-- [Maxim AI: Production Multi-Agent Systems](https://www.getmaxim.ai/articles/best-practices-for-building-production-ready-multi-agent-systems/)
-- [UiPath: Agent Builder Best Practices](https://www.uipath.com/blog/ai/agent-builder-best-practices)
-- [Assessment Framework for Agentic AI (arXiv 2512.12791)](https://arxiv.org/html/2512.12791v1)
-- [Measurement Imbalance in Agentic AI (arXiv 2506.02064)](https://arxiv.org/abs/2506.02064)
-
-**New Metrics & Schema Fields:**
-- `correlation_id`: Distributed tracing across multi-agent sessions (Maxim AI)
-- `tool_reliability_rate`: Separate from tool selection - key demo-to-deploy gap (Stanford/Harvard)
-- `recovery_rate`: Successful retries / total retries
-- `goal_adherence`: Did agent stay on task? (0.0-1.0)
-
-**New Principles:**
-- **Single-Responsibility Agents**: Each agent has ONE clear goal and narrow scope (UiPath)
-- **Multi-Dimensional Evaluation**: Technical + Human-Centered + Safety + Economic axes
-
-**Model Selection Clarification:**
-- **Opus**: Planning and architecture ONLY
-- **Sonnet**: Development and functional testing
-- **Haiku**: Unit tests, monitoring, and simple tasks
-
-### Changed
-- SKILL.md: Added Single-Responsibility Principle to subagent guidance
-- SKILL.md: Clarified model selection (Opus=planning, Sonnet=dev, Haiku=tests)
-- SKILL.md: Dynamic Agent Selection table now shows Planning/Development/Testing columns
-- tool-orchestration.md: Added correlation_id, tool_reliability_rate to schema
-- tool-orchestration.md: Added Multi-Dimensional Evaluation section
-- tool-orchestration.md: Expanded sources with 8 new research references
-
-### Research Validation
-Loki Mode already implements most research-backed patterns:
-| Pattern | Research Source | Status |
-|---------|----------------|--------|
-| Evaluator-optimizer | Anthropic | RARV cycle |
-| Parallelization | Anthropic | Parallel review |
-| Routing | Anthropic | Model selection |
-| Failure handling | Maxim AI | Circuit breakers |
-| Skill library | Voyager | Procedural memory |
-| Four-pillar evaluation | arXiv 2512.12791 | Quality pillars |
-
----
-
-## [2.28.0] - 2026-01-06
-
-### Added - ToolOrchestra-Inspired Efficiency & Reward System
-
-**Research source analyzed:**
-- [NVIDIA ToolOrchestra](https://github.com/NVlabs/ToolOrchestra) - #1 on GAIA benchmark, 37.1% on HLE
-- ToolOrchestra achieves 70% cost reduction vs GPT-5 through explicit efficiency optimization
-
-**New Tool Orchestration Reference (`references/tool-orchestration.md`):**
-- **Efficiency Metrics System**
-  - Track wall time, agent count, retry count per task
-  - Calculate efficiency scores against complexity baselines
-  - Store metrics in `.loki/metrics/efficiency/`
-
-- **Three-Reward Signal Framework** (ToolOrchestra pattern)
-  - **Outcome Reward**: +1.0 (success) | 0.0 (partial) | -1.0 (failure)
-  - **Efficiency Reward**: 0.0-1.0 based on resources vs baseline
-  - **Preference Reward**: Inferred from user actions (commit/revert/edit)
-  - Weighted aggregation: 60% outcome, 25% efficiency, 15% preference
-
-- **Dynamic Agent Selection by Complexity**
-  - Trivial: 1 agent, haiku, skip review
-  - Simple: 2 agents, haiku, single review
-  - Moderate: 4 agents, sonnet, standard 3-way review
-  - Complex: 8 agents, sonnet, deep review + devil's advocate
-  - Critical: 12 agents, opus, exhaustive + human checkpoint
-
-- **Task Complexity Classification**
-  - File scope signals (single/few/many/system-wide)
-  - Change type signals (typo/bug/feature/refactor/architecture)
-  - Domain signals (docs/tests/frontend/backend/fullstack/infra/security)
-
-- **Tool Usage Analytics**
-  - Track tool effectiveness per tool type
-  - Success rate, result quality, common patterns
-  - Weekly insights for continuous improvement
-
-- **Continuous Improvement Loop**
-  - Collect → Analyze → Adapt → Validate cycle
-  - A/B testing for agent selection strategies
-
-**New Directory Structure:**
-```
-.loki/metrics/
-├── efficiency/     # Task efficiency scores
-├── rewards/        # Outcome/efficiency/preference rewards
-└── dashboard.json  # Rolling 7-day metrics summary
-```
-
-### Changed
-- SKILL.md updated to v2.28.0 (~410 lines)
-- Quick Reference includes efficiency tracking step
-- Key Files includes `.loki/metrics/efficiency/`
-- Essential Patterns includes Tool Orchestration
-- Directory Structure includes metrics subsystem
-- References includes `tool-orchestration.md`
-
-### Comparison: Loki Mode vs ToolOrchestra
-
-| Feature | ToolOrchestra | Loki Mode 2.28.0 |
-|---------|---------------|------------------|
-| Multi-turn reasoning | Orchestrator-8B | RARV cycle |
-| Efficiency tracking | ✅ 70% cost reduction | ✅ Now implemented |
-| Reward signals | 3 types | ✅ 3 types (same) |
-| Dynamic tool selection | 5/10/15/20/all | ✅ By complexity (5 levels) |
-| Memory system | None | ✅ Episodic/Semantic/Procedural |
-| Anti-sycophancy | None | ✅ Blind review + Devil's Advocate |
-| Benchmarks | GAIA #1, HLE 37.1% | HumanEval 98.78%, SWE-bench 99.67% |
-
----
-
-## [2.27.0] - 2026-01-06
-
-### Added - 2025 Research-Backed Enhancements
-
-**Research sources analyzed:**
-- [Awesome Agentic Patterns](https://github.com/nibzard/awesome-agentic-patterns) - 105 production patterns
-- [Multi-Agent Collaboration Mechanisms Survey](https://arxiv.org/abs/2501.06322)
-- [CONSENSAGENT Anti-Sycophancy Framework](https://aclanthology.org/2025.findings-acl.1141/)
-- [GoalAct Hierarchical Planning](https://arxiv.org/abs/2504.16563)
-- [A-Mem/MIRIX Memory Systems](https://arxiv.org/html/2502.12110v11)
-- [Multi-Agent Reflexion (MAR)](https://arxiv.org/html/2512.20845)
-- [Iter-VF Verification](https://arxiv.org/html/2511.21734v1)
-
-**New Memory Architecture:**
-- **Episodic Memory** (`.loki/memory/episodic/`) - Specific interaction traces with timestamps
-- **Semantic Memory** (`.loki/memory/semantic/`) - Generalized patterns and anti-patterns
-- **Procedural Memory** (`.loki/memory/skills/`) - Learned action sequences
-- **Episodic-to-Semantic Consolidation** - Automatic pattern extraction (MemGPT/Voyager pattern)
-- **Zettelkasten-Style Linking** - Atomic notes with relation links (A-Mem pattern)
-
-**Anti-Sycophancy Protocol (CONSENSAGENT):**
-- **Blind Review Mode** - Reviewers cannot see each other's findings initially
-- **Devil's Advocate Reviewer** - Runs on unanimous approval to catch missed issues
-- **Heterogeneous Team Composition** - Different personalities/expertise per reviewer
-- **Research finding:** 30% fewer false positives with blind review + devil's advocate
-
-**Hierarchical Planning (GoalAct/TMS):**
-- **Global Planning** - Maintains overall goal and strategy
-- **High-Level Skills** - Decomposition into searching, coding, testing, writing, deploying
-- **Local Execution** - Specific actions within skill context
-- **Research finding:** 12% improvement in success rate
-
-**Iter-VF Verification Pattern:**
-- Verify extracted answer only (not whole reasoning chain)
-- Markovian retry process prevents context overflow
-- Fresh context with just error info on failure
-
-**New Reference Files:**
-- `references/advanced-patterns.md` (453 lines) - All 2025 research patterns
-- `references/memory-system.md` (437 lines) - Enhanced memory architecture
-
-### Changed
-- SKILL.md updated to v2.27.0 with research citations
-- Quality gates now include anti-sycophancy checks
-- Directory structure includes episodic/semantic/skills memory layers
-- Essential patterns include Memory Consolidation and Hierarchical Planning
-
-### Research Impact Summary
-| Enhancement | Source | Improvement |
-|-------------|--------|-------------|
-| Blind Review + Devil's Advocate | CONSENSAGENT | 30% fewer false positives |
-| Heterogeneous Teams | A-HMAD | 4-6% accuracy improvement |
-| Hierarchical Planning | GoalAct | 12% success rate improvement |
-| Episodic-to-Semantic | MemGPT | Genuine cross-session learning |
-
-## [2.26.0] - 2026-01-05
-
-### Added - Official SWE-bench Submission Support
-
-**Full trajectory logging and submission preparation for official SWE-bench leaderboard!**
-
-**New Features:**
-- **Trajectory Logging**: Full reasoning traces saved to `trajs/` directory
-  - Complete prompts and outputs for each agent step
-  - Timestamps and durations for performance analysis
-  - QA validation checks recorded
-- **Execution Logs**: Per-problem logs saved to `logs/` directory
-  - `patch.diff` - Generated patch file
-  - `report.json` - Execution metadata
-  - `test_output.txt` - Test results placeholder
-- **Submission Template**: Ready-to-use files for SWE-bench/experiments PR
-  - `metadata.yaml` - Submission metadata
-  - `README.md` - System description
-- **Prepare Submission Script**: `./benchmarks/prepare-submission.sh`
-  - Converts benchmark results to official submission format
-  - Generates JSONL predictions file
-  - Creates submission checklist
-
-**Usage:**
-```bash
-# Run benchmark with trajectory logging
-./benchmarks/run-benchmarks.sh swebench --execute --loki
-
-# Prepare submission from results
-./benchmarks/prepare-submission.sh benchmarks/results/YYYY-MM-DD-HH-MM-SS
-```
-
-## [2.25.0] - 2026-01-05
-
-### Added - Loki Mode SWE-bench Benchmark (99.67% Patch Generation)
-
-**Full SWE-bench Lite Multi-Agent Benchmark** - 299/300 problems!
-
-| System | SWE-bench Patch Gen | Notes |
-|--------|---------------------|-------|
-| Direct Claude | 99.67% (299/300) | Single agent baseline |
-| **Loki Mode (multi-agent)** | **99.67%** (299/300) | 4-agent pipeline with RARV |
-
-**Key Results:**
-- 299/300 problems generated patches (matches single-agent baseline)
-- Multi-agent pipeline: Architect -> Engineer -> QA -> Reviewer
-- Time: 3.5 hours
-- Only 1 problem failed
-
-**Key Finding:** After timeout optimization, multi-agent RARV matches single-agent performance on SWE-bench. The 4-agent pipeline adds verification without sacrificing coverage.
-
-### Changed
-- Updated README with SWE-bench Loki Mode results
-- Updated competitive analysis with benchmark comparison
-- Increased Architect timeout from 60s to 120s for complex problems
-- Increased Reviewer timeout from 30s to 60s
-
-## [2.24.0] - 2026-01-05
-
-### Added - Loki Mode Multi-Agent Benchmark (98.78% Pass@1)
-
-**True Multi-Agent Benchmark Implementation** - Now benchmarks actually use the Loki Mode agent pipeline!
-
-| System | HumanEval Pass@1 | Agent Type |
-|--------|------------------|------------|
-| **Loki Mode (multi-agent)** | **98.78%** | Architect->Engineer->QA->Reviewer |
-| Direct Claude | 98.17% | Single agent |
-| MetaGPT | 85.9-87.7% | Multi-agent |
-
-**Key Results:**
-- 162/164 problems passed (98.78%)
-- RARV cycle recovered 2 problems (HumanEval/38, HumanEval/132)
-- Only 2 problems failed after 3 RARV attempts (HumanEval/32, HumanEval/50)
-- Average attempts: 1.04 (most solved on first try)
-- Time: 45.1 minutes
-
-### Added
-- `--loki` flag for benchmark runner to use multi-agent system
-- `--retries N` flag to control RARV retry attempts
-- Architect agent (analyzes problem, designs approach)
-- Engineer agent (implements solution)
-- QA agent (tests solution)
-- Reviewer agent (analyzes failures, suggests fixes)
-- Engineer-Fix agent (applies fixes based on feedback)
-- Three-way comparison in README and competitive analysis
-
-### Changed
-- Updated README with Loki Mode badge (98.78%)
-- Updated competitive analysis with three-way comparison
-- Results stored in `benchmarks/results/humaneval-loki-results.json`
-
-## [2.23.0] - 2026-01-05
-
-### Added - Full SWE-bench Lite Benchmark (300 Problems)
-
-**99.67% Patch Generation on SWE-bench Lite** - 299/300 problems successfully generated patches!
-
-| Metric | Value |
-|--------|-------|
-| Patch Generation | 99.67% |
-| Generated | 299/300 |
-| Errors | 1 |
-| Model | Claude Opus 4.5 |
-| Time | 6.17 hours |
-
-### Changed
-- Updated competitive analysis with full SWE-bench results
-- Full results stored in `benchmarks/results/2026-01-05-01-24-17/`
-
-## [2.22.0] - 2026-01-05
-
-### Added - SWE-bench Lite Benchmark Results (50 Problems)
-
-**100% Patch Generation on SWE-bench Lite** - Initial 50 problems successfully generated patches!
-
-| Metric | Value |
-|--------|-------|
-| Patch Generation | 100% |
-| Generated | 50/50 |
-| Errors | 0 |
-| Model | Claude Opus 4.5 |
-| Time | 56.9 minutes |
-
-### Added
-- Benchmark badge in README showing 98.17% HumanEval Pass@1
-- Benchmark Results section in README
-- SWE-bench results in competitive analysis
-
-### Changed
-- Updated `docs/COMPETITIVE-ANALYSIS.md` with SWE-bench results
-- Results stored in `benchmarks/results/2026-01-05-01-35-39/`
-
-## [2.21.0] - 2026-01-05
-
-### Added - Published HumanEval Benchmark Results
-
-**98.17% Pass@1 on HumanEval** - Beats MetaGPT by 10.5 percentage points!
-
-| Metric | Value |
-|--------|-------|
-| Pass Rate | 98.17% |
-| Passed | 161/164 |
-| Failed | 3 |
-| Model | Claude Opus 4.5 |
-| Time | 21.1 minutes |
-
-**Competitor Comparison:**
-- MetaGPT: 85.9-87.7%
-- **Loki Mode: 98.17%** (+10.5%)
-
-### Fixed
-- **Benchmark Indentation Bug** - Solutions now include complete function with proper indentation
-  - Previous bug: Claude returned function body without indentation
-  - Fix: Prompt now requests complete function and auto-fixes indentation
-  - Result: Pass rate improved from ~2% to 98.17%
-
-### Changed
-- Updated `docs/COMPETITIVE-ANALYSIS.md` with published benchmark results
-- Benchmark results stored in `benchmarks/results/2026-01-05-00-49-17/`
-
-## [2.20.0] - 2026-01-05
-
-### Added - Benchmark Execution Mode
-
-#### `--execute` Flag for Benchmarks
-Full implementation of benchmark execution that runs problems through Claude:
-
-**HumanEval Execution** (`benchmarks/run-benchmarks.sh humaneval --execute`):
-- Sends each of 164 Python problems to Claude
-- Receives solution code from Claude
-- Executes solution against HumanEval test cases
-- Tracks pass/fail results with real-time progress
-- Saves solutions to `humaneval-solutions/` directory
-- Compares results to MetaGPT baseline (85.9-87.7%)
-
-**SWE-bench Execution** (`benchmarks/run-benchmarks.sh swebench --execute`):
-- Loads SWE-bench Lite dataset (300 real GitHub issues)
-- Generates git patches for each issue using Claude
-- Saves patches for SWE-bench evaluator
-- Outputs predictions file compatible with official harness
-
-**New Options**:
-- `--execute` - Actually run problems through Claude (vs setup only)
-- `--limit N` - Only run first N problems (useful for testing)
-- `--model MODEL` - Claude model to use (default: sonnet)
-- `--timeout N` - Timeout per problem in seconds (default: 120)
-- `--parallel N` - Run N problems in parallel (default: 1)
-
-**Example Usage**:
-```bash
-# Run first 10 HumanEval problems
-./benchmarks/run-benchmarks.sh humaneval --execute --limit 10
-
-# Run all 164 problems with Opus
-./benchmarks/run-benchmarks.sh humaneval --execute --model opus
-
-# Run 5 SWE-bench problems
-./benchmarks/run-benchmarks.sh swebench --execute --limit 5
-```
-
-### Changed
-- Benchmark runner now has two modes: SETUP (default) and EXECUTE
-- Results include pass rates, timing, and competitor comparison
-- Summary generation includes actual benchmark results when available
-
-## [2.19.1] - 2026-01-05
-
-### Fixed
-- **Enterprise Security Defaults** - All enterprise features now OFF by default
-  - `LOKI_AUDIT_LOG` changed from `true` to `false`
-  - Ensures Loki Mode works exactly as before with `--dangerously-skip-permissions`
-  - Enterprise features are opt-in, not forced
-
-## [2.19.0] - 2026-01-04
-
-### Added - Major Competitive Improvements
-
-Based on comprehensive competitive analysis against Claude-Flow (10.7K stars), MetaGPT (62.4K stars), CrewAI (25K+ stars), Cursor Agent ($29B valuation), and Devin AI ($10.2B valuation).
-
-#### 1. Benchmark Runner Infrastructure (`benchmarks/run-benchmarks.sh`)
-- **HumanEval Benchmark** - 164 Python programming problems
-  - Downloads official dataset from OpenAI
-  - Creates results JSON with pass rates
-  - Target: Match MetaGPT's 85.9-87.7% Pass@1
-- **SWE-bench Lite Benchmark** - 300 real-world GitHub issues
-  - Integrates with official SWE-bench harness
-  - Tracks resolution rates against competitors
-  - Target: Compete with top agents (45-77% resolution)
-- **Results Directory** - Timestamped results in `benchmarks/results/YYYY-MM-DD-HH-MM-SS/`
-- **Summary Generation** - Markdown report with methodology explanation
-
-#### 2. Enterprise Security Features (run.sh:70-76, 923-983)
-- **Staged Autonomy Mode** (`LOKI_STAGED_AUTONOMY=true`)
-  - Creates execution plan in `.loki/plans/current-plan.md`
-  - Waits for `.loki/signals/PLAN_APPROVED` before proceeding
-  - Mirrors Cursor's staged autonomy pattern
-- **Audit Logging** (`LOKI_AUDIT_LOG=true`)
-  - JSONL audit trail at `.loki/logs/audit-YYYYMMDD.jsonl`
-  - Logs: timestamp, event type, data, user, PID
-  - Events: SESSION_START, SESSION_END, AGENT_SPAWN, TASK_COMPLETE
-- **Command Blocking** (`LOKI_BLOCKED_COMMANDS`)
-  - Default blocks: `rm -rf /`, `dd if=`, `mkfs`, fork bomb
-  - Customizable via environment variable
-- **Parallel Agent Limiting** (`LOKI_MAX_PARALLEL_AGENTS=10`)
-  - Prevents resource exhaustion from too many agents
-  - Enforced in RARV instruction
-- **Path Restrictions** (`LOKI_ALLOWED_PATHS`)
-  - Restrict agent access to specific directories
-  - Empty = all paths allowed (default)
-
-#### 3. Cross-Project Learnings Database (run.sh:986-1136)
-- **Global Learnings Directory** (`~/.loki/learnings/`)
-  - `patterns.jsonl` - Successful patterns from past projects
-  - `mistakes.jsonl` - Errors to avoid with prevention strategies
-  - `successes.jsonl` - Proven approaches that worked
-- **Automatic Learning Extraction** - Parses CONTINUITY.md "Mistakes & Learnings" section at session end
-- **Contextual Loading** - Loads relevant learnings based on PRD content at session start
-- **Relevant Learnings File** - `.loki/state/relevant-learnings.json` for agent access
-- **Addresses Gap** - Competitors like Claude-Flow have AgentDB; now Loki Mode has cross-project memory
-
-#### 4. Competitive Analysis Documentation (`docs/COMPETITIVE-ANALYSIS.md`)
-- **Factual Comparison Table** - Real metrics vs competitors
-  - GitHub stars, agent counts, benchmark scores
-  - Enterprise security, observability, pricing
-  - Production readiness assessment
-- **Detailed Competitor Analysis** - Claude-Flow, MetaGPT, CrewAI, Cursor, Devin
-- **Critical Gaps Identified** - 5 priority areas for improvement
-- **Loki Mode Advantages** - Business ops, full SDLC, RARV, resource monitoring
-- **Improvement Roadmap** - Phased plan for addressing gaps
-
-### Changed
-- **RARV Cycle** - Enhanced to check cross-project learnings (run.sh:1430)
-  - Reads `.loki/state/relevant-learnings.json` at REASON step
-  - Avoids known mistakes from previous projects
-  - Applies successful patterns automatically
-- **Main Function** - Initializes learnings DB and extracts learnings at session end
-
-### Impact
-- **Credibility** - Benchmark infrastructure for verifiable claims
-- **Enterprise Ready** - Security features required for adoption
-- **Learning System** - Agents improve across projects, not just within sessions
-- **Competitive Positioning** - Clear documentation of advantages and gaps
-
-### Competitive Position After This Release
-| Capability | Before | After |
-|------------|--------|-------|
-| Published Benchmarks | None | HumanEval + SWE-bench infrastructure |
-| Enterprise Security | `--dangerously-skip-permissions` | Staged autonomy, audit logs, command blocking |
-| Cross-Project Learning | None | Global learnings database |
-| Competitive Documentation | None | Detailed analysis with sources |
-
-## [2.18.5] - 2026-01-04
-
-### Added
-- **System Resource Monitoring** - Prevents computer overload from too many parallel agents (run.sh:786-899):
-  - **Background Resource Monitor** checks CPU and memory usage every 5 minutes (configurable)
-  - **Automatic Warnings** logged when CPU or memory exceeds thresholds (default: 80%)
-  - **Resources JSON File** (`.loki/state/resources.json`) contains real-time resource status
-  - **RARV Integration** - Claude checks resources.json during REASON step and throttles agents if needed
-  - **macOS & Linux Support** - Platform-specific CPU/memory detection using `top`, `vm_stat`, `free`
-  - **Configurable Thresholds** via environment variables:
-    - `LOKI_RESOURCE_CHECK_INTERVAL` (default: 300 seconds = 5 minutes)
-    - `LOKI_RESOURCE_CPU_THRESHOLD` (default: 80%)
-    - `LOKI_RESOURCE_MEM_THRESHOLD` (default: 80%)
-
-### Changed
-- **RARV Cycle** - Updated REASON step to check `.loki/state/resources.json` for warnings (run.sh:1194)
-  - If CPU or memory is high, Claude will reduce parallel agent spawning or pause non-critical tasks
-  - Prevents system from becoming unusable due to too many agents
-- **Cleanup Handlers** - `stop_status_monitor()` now also stops resource monitor (run.sh:335)
-
-### Why This Matters
-**User Problem:** "Loki Mode spinning agents made my computer unusable and I had to hard restart"
-**Solution:** Resource monitoring prevents this by:
-1. Continuously tracking CPU and memory usage every 5 minutes
-2. Warning when thresholds are exceeded
-3. Allowing Claude to self-throttle by reducing agent count
-4. User can configure thresholds based on their hardware
-
-### Impact
-- **Prevents System Overload:** No more hard restarts due to too many parallel agents
-- **Self-Regulating:** Claude automatically reduces agent spawning when resources are constrained
-- **Transparent:** Resource status visible in `.loki/state/resources.json`
-- **Configurable:** Users can set custom thresholds for their hardware
-- **Cross-Platform:** Works on macOS and Linux
-- **User Request:** Directly addresses "add capability to check cpu and memory every few mins and let claude take decision on it"
-
-## [2.18.4] - 2026-01-04
-
-### Changed
-- **README.md Complete Restructure** - Transformed README to focus on value proposition and user experience:
-  - **New Hero Section:** Clear tagline "The First Truly Autonomous Multi-Agent Startup System" with compelling value prop
-  - **"Why Loki Mode?" Section:** Direct comparison table showing what others do vs. what Loki Mode does
-  - **Core Advantages List:** 5 key differentiators (truly autonomous, massively parallel, production-ready, self-improving, zero babysitting)
-  - **Dashboard & Real-Time Monitoring Section:** Dedicated section showcasing agent monitoring and task queue visualization with screenshot placeholders
-  - **Autonomous Capabilities Section:** Prominent explanation of RARV cycle, perpetual improvement mode, and auto-resume/self-healing
-  - **Simplified Quick Start:** 5-step getting started guide with clear "walk away" messaging
-  - **Cleaner Installation:** Moved detailed installation steps to separate INSTALLATION.md
-  - **Better Structure:** Logical flow from "what it is" → "why it's better" → "how to use it" → "how it works"
-
-### Added
-- **INSTALLATION.md** - Comprehensive installation guide with all platforms:
-  - Table of contents for easy navigation
-  - Quick install section (recommended approach)
-  - Three installation options for Claude Code (git clone, releases, minimal curl)
-  - Claude.ai web installation instructions
-  - Anthropic API Console installation instructions
-  - Verify installation section for all platforms
-  - Troubleshooting section with common issues and solutions
-  - Updating and uninstalling instructions
-
-- **docs/screenshots/** - Screenshot directory with detailed instructions:
-  - README.md explaining what screenshots to capture
-  - Specifications for dashboard-agents.png and dashboard-tasks.png
-  - Step-by-step instructions for creating screenshots
-  - Alternative methods using test fixtures
-  - Guidelines for professional, clean screenshots
-
-### Impact
-- **User Experience:** README now immediately conveys value and differentiators
-- **Clarity:** Installation details no longer clutter the main README
-- **Visual Appeal:** Dashboard screenshots section makes capabilities tangible
-- **Competitive Positioning:** Clear comparison shows why Loki Mode is better than alternatives
-- **Autonomous Focus:** RARV cycle and perpetual improvement are now prominent features
-- **Ease of Use:** Quick Start shows users can literally "walk away" after starting Loki Mode
-- **Professional Documentation:** Meets industry standards with proper structure, badges, and navigation
-- **User Request:** Directly addresses "focus on what it is, how it's better than anything out there, autonomous capabilities, usage for the user, dashboard screenshots and standard things"
-
-## [2.18.3] - 2026-01-04
-
-### Changed
-- **Clarified Agent Scaling Model** - Fixed misleading "37 agents" references across all documentation:
-  - **README.md:** Badge changed to "Agent Types: 37", description now emphasizes dynamic scaling (few agents for simple projects, 100+ for complex startups)
-  - **README.md:** Features table updated to "37 agent types across 6 swarms - dynamically spawned based on workload"
-  - **README.md:** Comparison table changed "Agents: 37" → "Agent Types: 37 (dynamically spawned)" and added "Parallel Scaling" row
-  - **README.md:** Vibe Kanban benefits changed from "all 37 agents" → "all active agents"
-  - **SKILL.md:** Section header changed to "Agent Types (37 Specialized Types)" with clarification about dynamic spawning
-  - **SKILL.md:** All swarm headers changed from "(X agents)" → "(X types)"
-  - **SKILL.md:** Example updated from "37 parallel agents" → "100+ parallel agents"
-  - **CONTEXT-EXPORT.md:** Updated to emphasize "37 specialized agent types" and dynamic scaling
-  - **agents.md:** Header changed to "Agent Type Definitions" with note about dynamic spawning based on project needs
-  - **integrations/vibe-kanban.md:** Changed "all 37 Loki agents" → "all active Loki agents"
-
-### Why This Matters
-The previous "37 agents" messaging was misleading because:
-- **37 is the number of agent TYPES**, not the number of agents that spawn
-- Loki Mode **dynamically spawns** only the agents needed for your specific project
-- A simple todo app might use 5-10 agents total
-- A complex startup could spawn 100+ agents working in parallel (multiple instances of the same type)
-- The system is designed for **functionality-based scaling**, not fixed counts
-
-### Impact
-- **Clarity:** Eliminates confusion about how many agents will actually run
-- **Realistic Expectations:** Users understand the system scales to their needs
-- **Accuracy:** Documentation now reflects the actual dynamic agent spawning behavior
-- **User Feedback:** Directly addresses user question about why docs mention "37 agents"
-
-## [2.18.2] - 2026-01-04
-
-### Added
-- **Agent Monitoring Dashboard** - Real-time visibility into active agents (run.sh:330-735):
-  - **Active Agents Section** with grid layout displaying all spawned agents
-  - **Agent Cards** showing:
-    - Agent ID and type (general-purpose, QA, DevOps, etc.)
-    - Model badge with color coding (Sonnet = blue, Haiku = orange, Opus = purple)
-    - Current status (active/completed)
-    - Current work being performed
-    - Runtime duration (e.g., "2h 15m")
-    - Tasks completed count
-  - **Active Agents Stat** in top stats bar
-  - Auto-refreshes every 3 seconds alongside task queue
-  - Responsive grid layout (adapts to screen size)
-
-- **Agent State Aggregator** - Collects agent data for dashboard (run.sh:737-773):
-  - `update_agents_state()` function aggregates `.agent/sub-agents/*.json` files
-  - Writes to `.loki/state/agents.json` for dashboard consumption
-  - Runs every 5 seconds via status monitor (run.sh:305, 311)
-  - Handles missing directories gracefully (returns empty array)
-  - Supports agent lineage schema from CONSTITUTION.md
-
-### Changed
-- **Dashboard Layout** - Reorganized for agent monitoring (run.sh:622-630):
-  - Added "Active Agents" section header above agent grid
-  - Added "Task Queue" section header above task columns
-  - Reordered stats to show "Active Agents" first
-  - Enhanced visual hierarchy with section separators
-
-- **Status Monitor** - Now updates agent state alongside tasks (run.sh:300-319):
-  - Calls `update_agents_state()` on startup
-  - Updates agents.json every 5 seconds in background loop
-  - Provides real-time agent tracking data for dashboard
-
-### Impact
-- **Visibility:** Real-time monitoring of all active agents, their models, and work
-- **Performance Tracking:** See which agents are using which models (Haiku vs Sonnet vs Opus)
-- **Debugging:** Quickly identify stuck agents or unbalanced workloads
-- **Cost Awareness:** Visual indication of model usage (expensive Opus vs cheap Haiku)
-- **User Request:** Directly addresses user's question "can you also have ability to see how many agents and their roles and work being done and their model?"
-
-## [2.18.1] - 2026-01-04
-
-### Fixed
-- **Model Selection Hierarchy** - Corrected default model documentation (SKILL.md:83-91):
-  - **Sonnet 4.5** is now clearly marked as **DEFAULT** for all standard implementation work
-  - **Haiku 4.5** changed to **OPTIMIZATION ONLY** for simple/parallelizable tasks
-  - **Opus 4.5** changed to **COMPLEX ONLY** for architecture & security
-  - Previous documentation incorrectly suggested Haiku as default for most subagents
-  - Aligns with best practices: Sonnet for quality, Haiku for speed optimization only
-
-- **run.sh Implementation Gap** - RARV cycle now implemented in runner script (run.sh:870-871, 908-916):
-  - Updated `rar_instruction` to `rarv_instruction` with full VERIFY step
-  - Added "Mistakes & Learnings" reading in REASON step
-  - Added self-verification loop: test → fail → capture error → update CONTINUITY.md → retry
-  - Added git checkpoint rollback on verification failure
-  - Mentions 2-3x quality improvement from self-verification
-  - **CRITICAL FIX:** v2.18.0 documented RARV but run.sh still used old RAR cycle
-  - run.sh now aligns with SKILL.md patterns
-
-### Impact
-- **Clarity:** Eliminates confusion about which model to use by default
-- **Consistency:** run.sh now implements what SKILL.md documents
-- **Quality:** Self-verification loop now active in production runs (not just documentation)
-- **Real-World Testing:** Fixes gap identified during actual project usage
-
-## [2.18.0] - 2026-01-04
-
-### Added
-- **Self-Updating Learning System** - Agents learn from mistakes automatically (SKILL.md:253-278):
-  - "Mistakes & Learnings" section in CONTINUITY.md template
-  - Error → Learning → Prevention pattern
-  - Self-update protocol: capture error, analyze root cause, write learning, retry
-  - Example format with timestamp, agent ID, what failed, why, how to prevent
-  - Prevents repeating same errors across agent spawns
-
-- **Automatic Self-Verification Loop (RARV Cycle)** - 2-3x quality improvement (SKILL.md:178-229):
-  - Enhanced RAR to RARV: Reason → Act → Reflect → **Verify**
-  - VERIFY step runs automated tests after every change
-  - Feedback loop: Test → Fail → Learn → Update CONTINUITY.md → Retry
-  - Rollback to last good git checkpoint on verification failure
-  - Achieves 2-3x quality improvement (Boris Cherny's observed result)
-  - AI tests its own work automatically
-
-- **Extended Thinking Mode Guidance** - For complex problems (SKILL.md:89-107):
-  - Added "Thinking Mode" column to model selection table
-  - Sonnet 4.5 with thinking for complex debugging, architecture
-  - Opus 4.5 with thinking for system design, security reviews
-  - When to use: architecture decisions, complex debugging, security analysis
-  - When NOT to use: simple tasks (wastes time and tokens)
-  - How it works: Model shows reasoning in `<thinking>` tags
-
-### Changed
-- **RARV Cycle** - Enhanced from RAR to include VERIFY step (SKILL.md:178):
-  - Added "READ Mistakes & Learnings" to REASON step
-  - Added "git checkpoint" note to ACT step
-  - Added complete VERIFY step with failure handling protocol
-  - Loop back to REASON on verification failure with learned context
-
-- **Quick Reference** - Updated with new patterns (SKILL.md:14-20):
-  - Step 1: Read CONTINUITY.md + "Mistakes & Learnings"
-  - Step 4: RARV cycle (added VERIFY)
-  - Step 6: NEW - Learn from errors pattern
-  - Essential Patterns: Added "Self-Verification Loop (Boris Cherny)"
-  - Memory Hierarchy: Added CONSTITUTION.md, noted "Mistakes & Learnings"
-
-- **Model Selection Table** - Added Thinking Mode column (SKILL.md:83-87):
-  - Haiku: Not available
-  - Sonnet: "Use for complex problems"
-  - Opus: "Use for architecture"
-
-### Inspired By
-**Boris Cherny (Creator of Claude Code) - "Max Setup" Pattern:**
-- Self-updating CLAUDE.md based on mistakes (we adapted to CONTINUITY.md)
-- Let AI test its own work (2-3x quality improvement observed)
-- Extended thinking mode for complex problems
-- "Less prompting, more systems. Parallelize + standardize + verify."
-
-### Impact
-- **Quality Improvement:** 2-3x (from automatic self-verification loop)
-- **Error Reduction:** Mistakes logged and prevented from repeating
-- **Learning System:** Agents build institutional knowledge over time
-- **Debugging Speed:** Extended thinking improves complex problem-solving
-
-### Migration Notes
-Existing `.loki/` projects automatically benefit from:
-- Enhanced RARV cycle (no changes needed)
-- Self-verification loop (runs automatically on task completion)
-- Extended thinking (agents will use when appropriate)
-
-To fully utilize:
-1. Add "Mistakes & Learnings" section to CONTINUITY.md (see template)
-2. Enable automatic testing in VERIFY step
-3. Use extended thinking mode for complex tasks
-
-## [2.17.0] - 2026-01-04
-
-### Added
-- **Git Checkpoint System** - Automatic commit protocol for rollback safety (SKILL.md:479-578):
-  - Automatic git commit after every completed task
-  - Structured commit message format with agent metadata
-  - [Loki] prefix for easy filtering in git log
-  - Commit SHA tracking in task metadata and CONTINUITY.md
-  - Rollback strategy for quality gate failures
-  - Benefits: Instant rollback, clear history, audit trail
-
-- **Agent Lineage & Context Preservation** - Prevent context drift across multi-agent execution (SKILL.md:580-748):
-  - `.agent/sub-agents/` directory structure for per-agent context files
-  - Agent context schema with inherited_context (immutable) and agent-specific context (mutable)
-  - Lineage tracking: every agent knows its parent and children
-  - Decision logging: all choices logged with rationale and alternatives
-  - Question tracking: clarifying questions and answers preserved
-  - Context handoff protocol when agent completes
-  - Lineage tree in `.agent/lineage.json` for full spawn hierarchy
-
-- **CONSTITUTION.md** - Machine-enforceable behavioral contract (autonomy/CONSTITUTION.md):
-  - 5 core inviolable principles with enforcement logic
-  - Agent behavioral contracts (orchestrator, engineering, QA, DevOps)
-  - Quality gates as YAML configs (pre-commit blocking, post-implementation auto-fix)
-  - Memory hierarchy (CONTINUITY.md → CONSTITUTION.md → CLAUDE.md → Ledgers → Agent context)
-  - Context lineage schema with JSON structure
-  - Git checkpoint protocol integration
-  - Runtime invariants (TypeScript assertions)
-  - Amendment process for constitution versioning
-
-- **Visual Specification Aids** - Mermaid diagram generation requirement (SKILL.md:481-485, CONSTITUTION.md):
-  - `.loki/specs/diagrams/` directory for Mermaid diagrams
-  - Required for complex features (3+ steps, architecture changes, state machines, integrations)
-  - Examples: authentication flows, system architecture, multi-step workflows
-  - Prevents ambiguity in AI-to-AI communication
-
-- **Machine-Readable Rules** - Structured artifacts over markdown (SKILL.md:2507-2511):
-  - `.loki/rules/` directory for enforceable contracts
-  - `pre-commit.schema.json` - Validation schemas
-  - `quality-gates.yaml` - Quality thresholds
-  - `agent-contracts.json` - Agent responsibilities
-  - `invariants.ts` - Runtime assertions
-
-### Changed
-- **Directory Structure** - Enhanced with new agent and rules directories (SKILL.md:2475-2541):
-  - Added `.agent/sub-agents/` for agent context tracking
-  - Added `.agent/lineage.json` for spawn tree
-  - Added `.loki/specs/diagrams/` for Mermaid diagrams
-  - Added `.loki/rules/` for machine-enforceable contracts
-- **Bootstrap Script** - Updated to create new directories (SKILL.md:2571)
-- **Quick Reference** - Added references to CONSTITUTION.md and agent lineage
-
-### Inspired By
-This release incorporates best practices from AI infrastructure thought leaders:
-- **Ivan Steshov** - Centralized constitution, agent lineage tracking, structured artifacts as contracts
-- **Addy Osmani** - Git as checkpoint system, specification-first approach, visual aids (Mermaid diagrams)
-- **Community Consensus** - Machine-enforceable rules over advisory markdown
-
-### Breaking Changes
-None - All additions are backward compatible with existing Loki Mode projects.
-
-### Migration Guide
-For existing `.loki/` projects:
-1. Run updated bootstrap script to create new directories
-2. Copy `autonomy/CONSTITUTION.md` to your project
-3. Optional: Enable git checkpoint protocol in orchestrator
-4. Optional: Enable agent lineage tracking for context preservation
-
-## [2.16.0] - 2026-01-02
-
-### Added
-- **Model Selection Strategy** - Performance and cost optimization (SKILL.md:78-119):
-  - Comprehensive model selection table (Haiku/Sonnet/Opus)
-  - Use Haiku 4.5 for simple tasks (tests, docs, commands, fixes)
-  - Use Sonnet 4.5 for standard implementation (default)
-  - Use Opus 4.5 for complex architecture/planning
-  - Speed/cost comparison matrix
-  - Haiku task categories checklist (10 common use cases)
-
-- **Haiku Parallelization Examples** - Maximize speed with 10+ concurrent agents (SKILL.md:2748-2806):
-  - Parallel unit testing (1 Haiku agent per test file)
-  - Parallel documentation (1 Haiku agent per module)
-  - Parallel linting (1 Haiku agent per directory)
-  - Background task execution with TaskOutput aggregation
-  - Performance gain calculations (8x faster with Haiku parallelization)
-
-- **Model Parameter in Task Dispatch Templates** - All templates now include model selection:
-  - Updated Task Tool Dispatch template with model parameter (SKILL.md:337)
-  - Added 5 concrete examples (Haiku for tests/docs/linting, Sonnet for implementation, Opus for architecture)
-  - Updated UNIT_TESTS phase with parallel Haiku execution strategy (SKILL.md:2041-2084)
-
-### Changed
-- **Quick Reference** - Added 5th critical step: "OPTIMIZE - Use Haiku for simple tasks" (SKILL.md:19)
-- **Agent Spawning Section** - Clarified model selection for implementation agents (SKILL.md:2744)
-- **Code Review** - Maintained Opus for security/architecture reviewers, Sonnet for performance
-
-### Performance Impact
-- **Unit Testing**: 50 test files × 30s = 25 min (sequential Sonnet) → 3 min (parallel Haiku) = **8x faster**
-- **Cost Reduction**: Haiku is cheapest model, using it for 70% of tasks significantly reduces costs
-- **Throughput**: 10+ Haiku agents running concurrently vs sequential Sonnet agents
-
-## [2.15.0] - 2026-01-02
-
-### Added
-- **Enhanced Quick Reference Section** - Immediate orientation for every turn:
-  - Critical First Steps checklist (4-step workflow)
-  - Key Files priority table with update frequency
-  - Decision Tree flowchart for "What To Do Next?"
-  - SDLC Phase Flow diagram (high-level overview)
-  - Essential Patterns (one-line quick reference)
-  - Common Issues & Solutions troubleshooting table
-
-### Changed
-- **Consolidated Redundant Templates** - Improved maintainability:
-  - CONTINUITY.md template: Single canonical version (lines 152-190), referenced in bootstrap
-  - Task Completion Report: Single canonical template (lines 298-341), all duplicates now reference it
-  - Severity-Based Blocking: Detailed table (lines 2639-2647), simplified version references it
-- **Improved Navigation** - Better file organization:
-  - Added comprehensive Table of Contents with categorized sections
-  - Cross-references between related sections
-  - Line number references for quick jumps
-
-### Fixed
-- Removed duplicate CONTINUITY.md template from bootstrap script (was lines 2436-2470)
-- Removed duplicate Task Completion Report from subagent dispatch section (was lines 1731-1764)
-- Consolidated severity matrices (removed duplicates, kept one authoritative version)
-
-## [2.14.0] - 2026-01-02
-
-### Added
-- **Claude Code Best Practices** - Integrated patterns from "Claude Code in Action" course:
-
-  **CLAUDE.md Generation:**
-  - Comprehensive codebase summary generated on bootstrap
-  - Included in EVERY Claude request for persistent context
-  - Contains: project summary, architecture, key files, critical patterns
-  - Auto-updated by agents on significant changes
-
-  **Three Memory Levels:**
-  1. **Project Memory**: `.loki/CONTINUITY.md` + `CLAUDE.md` (shared, committed)
-  2. **Agent Memory**: `.loki/memory/ledgers/` (per-agent, not committed)
-  3. **Global Memory**: `.loki/rules/` (permanent patterns, committed)
-
-  **Plan Mode Pattern:**
-  - Research phase (read-only, find all relevant files)
-  - Planning phase (create detailed plan, NO code yet)
-  - Review checkpoint (get approval before implementing)
-  - Implementation phase (execute plan systematically)
-  - Use for: multi-file refactoring, architecture decisions, complex features
-
-  **Thinking Mode:**
-  - Trigger with "Ultra think" prefix
-  - Extended reasoning budget for complex logic
-  - Use for: subtle bugs, performance optimization, security assessment, architectural trade-offs
-
-- **Hooks System (Quality Gates)**:
-
-  **Pre-Tool-Use Hooks** - Block execution (exit code 2):
-  - Prevent writes to auto-generated files
-  - Validate implementation matches spec before write
-  - Example: `.loki/hooks/pre-write.sh`
-
-  **Post-Tool-Use Hooks** - Auto-fix after execution:
-  - Type checking (TypeScript/mypy) with auto-fix feedback
-  - Auto-formatting (Prettier, Black, gofmt)
-  - Update CLAUDE.md on architecture changes
-  - Example: `.loki/hooks/post-write.sh`
-
-  **Deduplication Hook** - Prevent AI slop:
-  - Launches separate Claude instance to detect duplicates
-  - Suggests existing functions to reuse
-  - Example: `.loki/hooks/post-write-deduplicate.sh`
-
-- **Problem-Solving Workflows**:
-
-  **3-Step Pattern** (for non-trivial tasks):
-  1. Identify & Analyze: Grep/Read relevant files, create mental model
-  2. Request Planning: Describe feature, get implementation plan (NO CODE)
-  3. Implement Plan: Execute systematically, test after each file
-
-  **Test-Driven Development Pattern:**
-  1. Context Gathering: Read code, understand patterns, review spec
-  2. Test Design: Ask Claude to suggest tests based on spec
-  3. Test Implementation: Implement tests → FAIL (red phase)
-  4. Implementation: Write code to pass tests → GREEN → refactor
-
-- **Performance Optimization Pattern**:
-  - Profile critical paths (benchmarks, profiling tools)
-  - Create todo list of optimization opportunities
-  - Implement fixes systematically
-  - Real example: Chalk library 3.9x throughput improvement
-
-### Changed
-- **Directory Structure** - Added:
-  - `.loki/hooks/` - Pre/post tool-use hooks for quality gates
-  - `.loki/plans/` - Implementation plans (Plan Mode output)
-
-- **Bootstrap Script** - Creates hooks/ and plans/ directories
-
-- **RAR Cycle** - Enhanced with Claude Code patterns:
-  - REASON: Read CONTINUITY.md + CLAUDE.md
-  - ACT: Use hooks for quality gates
-  - REFLECT: Update CONTINUITY.md + CLAUDE.md
-
-### Best Practices
-1. **Build incrementally** - Plan mode for architecture, small steps for implementation
-2. **Maintain context** - Update CLAUDE.md and CONTINUITY.md continuously
-3. **Verify outputs** - Use hooks for automated quality checks
-4. **Prevent duplicates** - Deduplication hooks before shipping
-5. **Test first** - TDD workflow prevents regressions
-6. **Think deeply** - Use "Ultra think" for complex decisions
-7. **Block bad writes** - Pre-tool-use hooks enforce quality gates
-
-**"Claude Code functions best as flexible assistant that grows with team needs through tool expansion rather than fixed functionality"**
-
-## [2.13.0] - 2026-01-02
-
-### Added
-- **Spec-Driven Development (SDD)** - Specifications as source of truth BEFORE code:
-
-  **Philosophy**: `Spec → Tests from Spec → Code to Satisfy Spec → Validation`
-
-  - OpenAPI 3.1 specifications written FIRST (before architecture/code)
-  - Spec is executable contract between frontend/backend
-  - Prevents API drift and breaking changes
-  - Enables parallel development (frontend mocks from spec)
-  - Documentation auto-generated from spec (always accurate)
-
-  **Workflow**:
-  1. Parse PRD and extract API requirements
-  2. Generate OpenAPI spec with all endpoints, schemas, error codes
-  3. Validate spec with Spectral linter
-  4. Generate TypeScript types, client SDK, server stubs, docs
-  5. Implement contract tests BEFORE implementation
-  6. Code implements ONLY what's in spec
-  7. CI/CD validates implementation against spec
-
-  **Spec Storage**: `.loki/specs/openapi.yaml`
-
-  **Spec Precedence**: Spec > PRD, Spec > Code, Spec > Documentation
-
-- **Model Context Protocol (MCP) Integration** - Standardized agent communication:
-
-  **Architecture**:
-  - Each swarm is an MCP server (engineering, operations, business, data, growth)
-  - Orchestrator is MCP client consuming swarm servers
-  - Standardized tool/resource exchange protocol
-  - Composable, interoperable agents
-
-  **Benefits**:
-  1. **Composability**: Mix agents from different sources
-  2. **Interoperability**: Work with GitHub Copilot, other AI assistants
-  3. **Modularity**: Each swarm is independent, replaceable
-  4. **Discoverability**: Listed in GitHub MCP Registry
-  5. **Reusability**: Other teams can use Loki agents standalone
-
-  **MCP Servers Implemented**:
-  - `loki-engineering-swarm`: Frontend, backend, database, QA agents
-    - Tools: implement-feature, run-tests, review-code, refactor-code
-    - Resources: loki://engineering/state, loki://engineering/continuity
-  - `loki-operations-swarm`: DevOps, security, monitoring agents
-    - Tools: deploy-application, run-security-scan, setup-monitoring
-  - `loki-business-swarm`: Marketing, sales, legal agents
-    - Tools: create-marketing-campaign, generate-sales-materials
-
-  **External MCP Integration**:
-  - GitHub MCP (create PRs, manage issues)
-  - Playwright MCP (browser automation, E2E tests)
-  - Notion MCP (knowledge base, documentation)
-
-  **MCP Directory**: `.loki/mcp/` with servers/, orchestrator.ts, registry.yaml
-
-- **Spec Evolution & Versioning**:
-  - Semver for API versions (breaking → major, new endpoints → minor, fixes → patch)
-  - Backwards compatibility via multiple version support (/v1, /v2)
-  - Breaking change detection in CI/CD
-  - 6-month deprecation migration path
-
-- **Contract Testing**:
-  - Tests written from spec BEFORE implementation
-  - Request/response validation against OpenAPI schema
-  - Auto-generated Postman collections
-  - Schemathesis integration for fuzz testing
-
-### Changed
-- **Phase 2: Architecture** - Now SPEC-FIRST:
-  1. Extract API requirements from PRD
-  2. Generate OpenAPI 3.1 specification (BEFORE code)
-  3. Generate artifacts from spec (types, SDK, stubs, docs)
-  4. Select tech stack (based on spec requirements)
-  5. Generate infrastructure requirements (from spec)
-  6. Create project scaffolding (with contract testing)
-
-- **Directory Structure** - Added new directories:
-  - `.loki/specs/` - OpenAPI, GraphQL, AsyncAPI specifications
-  - `.loki/mcp/` - MCP server implementations and registry
-  - `.loki/logs/static-analysis/` - Static analysis results
-
-- **Bootstrap Script** - Creates specs/ and mcp/ directories
-
-### Philosophy
-**"Be the best"** - Integrating top approaches from 2025:
-
-1. **Agentic AI**: Autonomous agents that iterate, recognize errors, fix mistakes in real-time
-2. **MCP**: Standardized agent communication for composability across platforms
-3. **Spec-Driven Development**: Specifications as executable contracts, not afterthoughts
-
-Loki Mode now combines the best practices from GitHub's ecosystem:
-- **Speed**: Autonomous multi-agent development
-- **Control**: Static analysis + AI review + spec validation
-- **Interoperability**: MCP-compatible agents work with any AI platform
-- **Quality**: Spec-first prevents drift, contract tests ensure compliance
-
-"Specifications are the shared source of truth" - enabling parallel development, preventing API drift, and ensuring documentation accuracy.
-
-## [2.12.0] - 2026-01-02
-
-### Added
-- **Quality Control Principles** - Integrated GitHub's "Speed Without Control" framework:
-
-  **Principle 1: Guardrails, Not Just Acceleration**
-  - Static analysis before AI review (CodeQL, ESLint, Pylint, type checking)
-  - Automated detection of unused vars, duplicated logic, code smells
-  - Cyclomatic complexity limits (max 15 per function)
-  - Secret scanning to prevent credential leaks
-  - 5 quality gate categories with blocking rules
-
-  **Principle 2: Structured Prompting for Subagents**
-  - All subagent dispatches must include: GOAL, CONSTRAINTS, CONTEXT, OUTPUT FORMAT
-  - Goals explain "what success looks like" (not just actions)
-  - Constraints define boundaries (dependencies, compatibility, performance)
-  - Context includes CONTINUITY.md, ledgers, learnings, architecture decisions
-  - Output format specifies deliverables (tests, docs, benchmarks)
-
-  **Principle 3: Document Decisions, Not Just Code**
-  - Every completed task requires decision documentation
-  - WHY: Problem, root cause, solution chosen, alternatives considered
-  - WHAT: Files modified, APIs changed, behavior changes, dependencies
-  - TRADE-OFFS: Gains, costs, neutral changes
-  - RISKS: What could go wrong, mitigation strategies
-  - TEST RESULTS: Unit/integration/performance metrics
-  - NEXT STEPS: Follow-up tasks
-
-- **AI Slop Prevention** - Automated detection and blocking:
-  - Warning signs: quality degradation, copy-paste duplication, over-engineering
-  - Missing error handling, generic variable names, magic numbers
-  - Commented-out code, TODO comments without issues
-  - Auto-fail and re-dispatch with stricter constraints
-
-- **Two-Stage Code Review**:
-  - **Stage 1**: Static analysis (automated) runs first
-  - **Stage 2**: AI reviewers (opus/sonnet) only after static analysis passes
-  - AI reviewers receive static analysis results as context
-  - Prevents wasting AI review time on issues machines can catch
-
-- **Enhanced Task Schema**:
-  - `payload.goal` - High-level objective (required)
-  - `payload.constraints` - Array of limitations
-  - `payload.context` - Related files, ADRs, previous attempts
-  - `result.decisionReport` - Complete Why/What/Trade-offs documentation
-  - Decision reports archived to `.loki/logs/decisions/`
-
-### Changed
-- CODE_REVIEW phase now requires static analysis before AI reviewers
-- Subagent dispatch template updated with GOAL/CONSTRAINTS/CONTEXT/OUTPUT
-- Task completion requires decision documentation (not just code output)
-- Quality gates now include static analysis tools (CodeQL, linters, security scanners)
-- Context-Aware Subagent Dispatch section rewritten for structured prompting
-
-### Philosophy
-"Speed and control aren't trade-offs. They reinforce each other." - GitHub
-
-AI accelerates velocity but can introduce "AI slop" (semi-functional code accumulating technical debt). Loki Mode now pairs acceleration with visible guardrails: static analysis catches machine-detectable issues, structured prompting ensures intentional development, and decision documentation demonstrates thinking beyond shipping features.
-
-## [2.11.0] - 2026-01-02
-
-### Added
-- **CONTINUITY.md Working Memory Protocol** - Inspired by OpenAI's persistent memory pattern:
-  - Single working memory file at `.loki/CONTINUITY.md`
-  - Read at START of every RAR (Reason-Act-Reflect) cycle
-  - Update at END of every RAR cycle
-  - Primary source of truth for "what am I doing right now?"
-
-- **Working Memory Template** includes:
-  - Active goal and current task tracking
-  - Just completed items (last 5)
-  - Next actions in priority order
-  - Active blockers
-  - Key decisions this session
-  - Working context and files being modified
-
-- **Memory Hierarchy Clarification**:
-  1. `CONTINUITY.md` - Active working memory (every turn)
-  2. `ledgers/` - Agent checkpoint state (on milestones)
-  3. `handoffs/` - Transfer documents (on agent switch)
-  4. `learnings/` - Pattern extraction (on task completion)
-  5. `rules/` - Permanent validated patterns
-
-### Changed
-- RAR cycle now explicitly reads CONTINUITY.md in REASON phase
-- RAR cycle now explicitly updates CONTINUITY.md in REFLECT phase
-- Bootstrap script creates initial CONTINUITY.md
-- Context Continuity Protocol updated to prioritize CONTINUITY.md
-- Directory structure updated to show CONTINUITY.md at root of `.loki/`
-
-### Philosophy
-CONTINUITY.md provides a simpler, more explicit "every turn" memory protocol that complements the existing sophisticated memory system. It ensures Claude always knows exactly what it's working on, what just happened, and what needs to happen next.
-
-## [2.10.1] - 2026-01-01
-
-### Fixed
-- **API Console Upload** - Added `loki-mode-api-X.X.X.zip` artifact for console.anthropic.com
-  - API requires SKILL.md inside a folder wrapper (`loki-mode/SKILL.md`)
-  - Claude.ai uses flat structure (`SKILL.md` at root)
-  - Updated release workflow to generate both formats
-  - Three release artifacts now available:
-    - `loki-mode-X.X.X.zip` - for Claude.ai website
-    - `loki-mode-api-X.X.X.zip` - for console.anthropic.com
-    - `loki-mode-claude-code-X.X.X.zip` - for Claude Code CLI
-
-## [2.10.0] - 2025-12-31
-
-### Added
-- **Context Memory Management System** - Inspired by Continuous-Claude-v2:
-  - **Ledger-based state preservation** - Save state to `.loki/memory/ledgers/` instead of letting context degrade through compaction
-  - **Agent Handoff System** - Clean context transfer between agents at `.loki/memory/handoffs/`
-  - **Session Learnings** - Extract patterns and learnings to `.loki/memory/learnings/`
-  - **Compound Rules** - Promote proven patterns to permanent rules at `.loki/rules/`
-  - **Context Clear Signals** - Agent can request context reset via `.loki/signals/CONTEXT_CLEAR_REQUESTED`
-
-- **Memory Directory Structure**:
-  ```
-  .loki/memory/
-  ├── ledgers/     # Current state per agent
-  ├── handoffs/    # Agent-to-agent transfers
-  └── learnings/   # Extracted patterns
-  .loki/rules/     # Permanent proven rules
-  .loki/signals/   # Inter-process communication
-  ```
-
-- **Context Injection on Resume** - Wrapper now loads ledger and handoff context when resuming iterations
-
-### Changed
-- Prompts now include memory management instructions
-- Wrapper initializes memory directory structure
-- Build prompt includes ledger/handoff content for continuity
-
-### Philosophy
-Instead of "degrade gracefully through compression", Loki Mode now uses "reset cleanly with memory preservation" - ensuring perfect context continuity across unlimited iterations.
-
-## [2.9.1] - 2025-12-31
-
-### Fixed
-- **Immediate continuation on success** - Successful iterations (exit code 0) now continue immediately
-- No more 17+ minute waits between successful iterations
-- Exponential backoff only applies to errors or rate limits
-
-## [2.9.0] - 2025-12-31
-
-### Added
-- **Ralph Wiggum Mode** - True perpetual autonomous operation:
-  - Reason-Act-Reflect (RAR) cycle for every iteration
-  - Products are NEVER "complete" - always improvements to make
-  - Stripped all interactive safety gates
-  - Perpetual loop continues even when Claude claims completion
-
-- **Perpetual Improvement Loop** - New philosophy:
-  - Claude never declares "done" - there's always more to improve
-  - When queue empties: find new improvements, run SDLC phases again, hunt bugs
-  - Only stops on: max iterations, explicit completion promise, or user interrupt
-
-- **New Environment Variables**:
-  - `LOKI_COMPLETION_PROMISE` - EXPLICIT stop condition (must output exact text)
-  - `LOKI_MAX_ITERATIONS` - Safety limit (default: 1000)
-  - `LOKI_PERPETUAL_MODE` - Ignore ALL completion signals (default: false)
-
-- **Completion Promise Detection** - Only stops when Claude outputs the exact promise text
-  - Example: `LOKI_COMPLETION_PROMISE="ALL TESTS PASSING 100%"`
-  - Claude must explicitly output "COMPLETION PROMISE FULFILLED: ALL TESTS PASSING 100%"
-
-### Changed
-- Default behavior now runs perpetually until max iterations
-- Removed auto-completion based on "finalized" phase (was allowing hallucinated completion)
-- Prompts now emphasize never stopping, always finding improvements
-- SKILL.md completely rewritten for Ralph Wiggum Mode philosophy
-
-## [2.8.1] - 2025-12-29
-
-### Fixed
-- **Dashboard showing all 0s** - Added explicit instructions to SKILL.md to use queue JSON files instead of TodoWrite tool
-- Claude now properly populates `.loki/queue/*.json` files for live dashboard tracking
-- Added queue system usage guide with JSON format and examples
-
-### Changed
-- SKILL.md now explicitly prohibits TodoWrite in favor of queue system
-- Added "Task Management: Use Queue System" section with clear examples
-
-## [2.8.0] - 2025-12-29
-
-### Added
-- **Smart Rate Limit Detection** - Automatically detects rate limit messages and waits until reset:
-  - Parses "resets Xam/pm" from Claude output
-  - Calculates exact wait time until reset (+ 2 min buffer)
-  - Shows human-readable countdown (e.g., "4h 30m")
-  - Longer countdown intervals for multi-hour waits (60s vs 10s)
-  - No more wasted retry attempts during rate limits
-
-### Changed
-- Countdown display now shows human-readable format (e.g., "Resuming in 4h 28m...")
-
-## [2.7.0] - 2025-12-28
-
-### Added
-- **Codebase Analysis Mode** - When no PRD is provided, Loki Mode now:
-  1. **Auto-detects PRD files** - Searches for `PRD.md`, `REQUIREMENTS.md`, `SPEC.md`, `PROJECT.md` and docs variants
-  2. **Analyzes existing codebase** - If no PRD found, performs comprehensive codebase analysis:
-     - Scans directory structure and identifies tech stack
-     - Reads package.json, requirements.txt, go.mod, etc.
-     - Examines README and entry points
-     - Identifies current features and architecture
-  3. **Generates PRD** - Creates `.loki/generated-prd.md` with:
-     - Project overview and current state
-     - Inferred requirements from implementation
-     - Identified gaps (missing tests, security, docs)
-     - Recommended improvements
-  4. **Proceeds with SDLC** - Uses generated PRD as baseline for all testing phases
-
-### Fixed
-- Dashboard 404 errors - Server now runs from `.loki/` root to properly serve queue/state JSON files
-- Updated dashboard URL to `/dashboard/index.html`
-
-## [2.6.0] - 2025-12-28
-
-### Added
-- **Complete SDLC Testing Phases** - 11 comprehensive testing phases (all enabled by default):
-  - `UNIT_TESTS` - Run existing unit tests with coverage
-  - `API_TESTS` - Functional API testing with real HTTP requests
-  - `E2E_TESTS` - End-to-end UI testing with Playwright/Cypress
-  - `SECURITY` - OWASP scanning, auth flow verification, dependency audit
-  - `INTEGRATION` - SAML, OIDC, Entra ID, Slack, Teams testing
-  - `CODE_REVIEW` - 3-reviewer parallel code review (Security, Architecture, Performance)
-  - `WEB_RESEARCH` - Competitor analysis, feature gap identification
-  - `PERFORMANCE` - Load testing, benchmarking, Lighthouse audits
-  - `ACCESSIBILITY` - WCAG 2.1 AA compliance testing
-  - `REGRESSION` - Compare against previous version, detect regressions
-  - `UAT` - User acceptance testing simulation, bug hunting
-- **Phase Skip Options** - Each phase can be disabled via environment variables:
-  - `LOKI_PHASE_UNIT_TESTS=false` to skip unit tests
-  - `LOKI_PHASE_SECURITY=false` to skip security scanning
-  - etc.
-
-### Changed
-- Prompt now includes `SDLC_PHASES_ENABLED: [...]` to inform Claude which phases to execute
-- SKILL.md updated with detailed instructions for each SDLC phase
-
-## [2.5.0] - 2025-12-28
-
-### Added
-- **Real-time Streaming Output** - Claude's output now streams live using `--output-format stream-json`
-  - Parses JSON stream in real-time to display text, tool calls, and results
-  - Shows `[Tool: name]` when Claude uses a tool
-  - Shows `[Session complete]` when done
-- **Web Dashboard** - Visual task board with Anthropic design language
-  - Cream/beige background with coral (#D97757) accents matching Anthropic branding
-  - Auto-starts at `http://127.0.0.1:57374` and opens in browser
-  - Shows task counts and Kanban-style columns (Pending, In Progress, Completed, Failed)
-  - Auto-refreshes every 3 seconds
-  - Disable with `LOKI_DASHBOARD=false`
-  - Configure port with `LOKI_DASHBOARD_PORT=<port>`
-
-### Changed
-- Replaced `--print` mode with `--output-format stream-json --verbose` for proper streaming
-- Python-based JSON parser extracts and displays Claude's responses in real-time
-- Simple HTML dashboard replaces Vibe Kanban (no external dependencies)
-
-### Fixed
-- Live output now actually streams (was buffered until completion in 2.4.0)
-- Completion detection now recognizes `finalized` and `growth-loop` phases
-- Prompt now explicitly instructs Claude to act autonomously without asking questions
-- Added `.loki/COMPLETED` marker file detection for clean exit
-
-## [2.4.0] - 2025-12-28
-
-### Added
-- **Live Output** - Claude's output now streams in real-time using pseudo-TTY
-  - Uses `script` command to allocate PTY for proper streaming
-  - Visual separator shows when Claude is working
-- **Status Monitor** - `.loki/STATUS.txt` updates every 5 seconds with:
-  - Current phase
-  - Task counts (pending, in-progress, completed, failed)
-  - Monitor with: `watch -n 2 cat .loki/STATUS.txt`
-
-### Changed
-- Replaced Vibe Kanban auto-launch with simpler status file monitor
-- Autonomy runner uses `script` for proper TTY output on macOS/Linux
-
-## [2.3.0] - 2025-12-27
-
-### Added
-- **Unified Autonomy Runner** (`autonomy/run.sh`) - Single script that does everything:
-  - Prerequisite checks (Claude CLI, Python, Git, curl, Node.js, jq)
-  - Skill installation verification
-  - `.loki/` directory initialization
-  - Autonomous execution with auto-resume
-  - ASCII art banner and colored logging
-  - Exponential backoff with jitter
-  - State persistence across restarts
-  - See `autonomy/README.md` for detailed docs
-
-### Changed
-- Moved autonomous execution to dedicated `autonomy/` folder (separate from skill)
-- Updated README with new Quick Start using `./autonomy/run.sh`
-- Release workflow now includes `autonomy/` folder
-
-### Deprecated
-- `scripts/loki-wrapper.sh` still works but `autonomy/run.sh` is now recommended
-
-## [2.2.0] - 2025-12-27
-
-### Added
-- **Vibe Kanban Integration** - Optional visual dashboard for monitoring agents:
-  - `integrations/vibe-kanban.md` - Full integration guide
-  - `scripts/export-to-vibe-kanban.sh` - Export Loki tasks to Vibe Kanban format
-  - Task status mapping (Loki queues → Kanban columns)
-  - Phase-to-column mapping for visual progress tracking
-  - Metadata preservation for debugging
-  - See [BloopAI/vibe-kanban](https://github.com/BloopAI/vibe-kanban)
-
-### Documentation
-- README: Added Integrations section with Vibe Kanban setup
-
-## [2.1.0] - 2025-12-27
-
-### Added
-- **Autonomous Wrapper Script** (`scripts/loki-wrapper.sh`) - True autonomy with auto-resume:
-  - Monitors Claude Code process and detects when session ends
-  - Automatically resumes from checkpoint on rate limits or interruptions
-  - Exponential backoff with jitter (configurable via environment variables)
-  - State persistence in `.loki/wrapper-state.json`
-  - Completion detection via orchestrator state or `.loki/COMPLETED` marker
-  - Clean shutdown handling with SIGINT/SIGTERM traps
-  - Configurable: `LOKI_MAX_RETRIES`, `LOKI_BASE_WAIT`, `LOKI_MAX_WAIT`
-
-### Documentation
-- Added True Autonomy section to README explaining wrapper usage
-- Documented how wrapper detects session completion and rate limits
-
-## [2.0.3] - 2025-12-27
-
-### Fixed
-- **Proper Skill File Format** - Release artifacts now follow Claude's expected format:
-  - `loki-mode-X.X.X.zip` / `.skill` - For Claude.ai (SKILL.md at root)
-  - `loki-mode-claude-code-X.X.X.zip` - For Claude Code (loki-mode/ folder)
-
-### Improved
-- **Installation Instructions** - Separate instructions for Claude.ai vs Claude Code
-- **SKILL.md** - Already has required YAML frontmatter with `name` and `description`
-
-## [2.0.2] - 2025-12-27
-
-### Fixed
-- **Release Artifact Structure** - Zip now contains `loki-mode/` folder (not `loki-mode-X.X.X/`)
-  - Users can extract directly to skills directory without renaming
-  - Only includes essential skill files (no .git or .github folders)
-
-### Improved
-- **Installation Instructions** - Updated README with clearer extraction steps
-
-## [2.0.1] - 2025-12-27
-
-### Improved
-- **Installation Documentation** - Comprehensive installation guide:
-  - Explains which file is the actual skill (`SKILL.md`)
-  - Shows skill file structure and required files
-  - Option 1: Download from GitHub Releases (recommended)
-  - Option 2: Git clone
-  - Option 3: Minimal install with curl commands
-  - Verification steps
-
-## [2.0.0] - 2025-12-27
-
-### Added
-- **Example PRDs** - 4 test PRDs for users to try before implementing:
-  - `examples/simple-todo-app.md` - Quick functionality test (~10 min)
-  - `examples/api-only.md` - Backend agent testing
-  - `examples/static-landing-page.md` - Frontend/marketing testing
-  - `examples/full-stack-demo.md` - Comprehensive test (~30-60 min)
-
-- **Comprehensive Test Suite** - 53 tests across 6 test files:
-  - `tests/test-bootstrap.sh` - Directory structure, state initialization (8 tests)
-  - `tests/test-task-queue.sh` - Queue operations, priorities (8 tests)
-  - `tests/test-circuit-breaker.sh` - Failure handling, recovery (8 tests)
-  - `tests/test-agent-timeout.sh` - Timeout, stuck process handling (9 tests)
-  - `tests/test-state-recovery.sh` - Checkpoints, recovery (8 tests)
-  - `tests/test-wrapper.sh` - Wrapper script, auto-resume (12 tests)
-  - `tests/run-all-tests.sh` - Main test runner
-
-- **Timeout and Stuck Agent Handling** - New section in SKILL.md:
-  - Task timeout configuration per action type (build: 10min, test: 15min, deploy: 30min)
-  - macOS-compatible timeout wrapper with Perl fallback
-  - Heartbeat-based stuck agent detection
-  - Watchdog pattern for long operations
-  - Graceful termination handling with SIGTERM/SIGKILL
-
-### Changed
-- Updated README with example PRDs and test instructions
-- Tests are macOS compatible (Perl-based timeout fallback when `timeout` command unavailable)
-
-## [1.1.0] - 2025-12-27
-
-### Fixed
-- **macOS Compatibility** - Bootstrap script now works on macOS:
-  - Uses `uuidgen` on macOS, falls back to `/proc/sys/kernel/random/uuid` on Linux
-  - Fixed `sed -i` syntax for macOS (uses `sed -i ''`)
-
-- **Agent Count** - Fixed README to show correct agent count (37 agents)
-
-- **Username Placeholder** - Replaced placeholder username with actual GitHub username
-
-## [1.0.1] - 2025-12-27
-
-### Changed
-- Minor README formatting updates
-
-## [1.0.0] - 2025-12-27
-
-### Added
-- **Initial Release** of Loki Mode skill for Claude Code
-
-- **Multi-Agent Architecture** - 37 specialized agents across 6 swarms:
-  - Engineering Swarm (8 agents): frontend, backend, database, mobile, API, QA, perf, infra
-  - Operations Swarm (8 agents): devops, security, monitor, incident, release, cost, SRE, compliance
-  - Business Swarm (8 agents): marketing, sales, finance, legal, support, HR, investor, partnerships
-  - Data Swarm (3 agents): ML, engineering, analytics
-  - Product Swarm (3 agents): PM, design, techwriter
-  - Growth Swarm (4 agents): hacker, community, success, lifecycle
-  - Review Swarm (3 agents): code, business, security
-
-- **Distributed Task Queue** with:
-  - Priority-based task scheduling
-  - Exponential backoff for retries
-  - Dead letter queue for failed tasks
-  - Idempotency keys for duplicate prevention
-  - File-based locking for atomic operations
-
-- **Circuit Breakers** for failure isolation:
-  - Per-agent-type failure thresholds
-  - Automatic cooldown and recovery
-  - Half-open state for testing recovery
-
-- **8 Execution Phases**:
-  1. Bootstrap - Initialize `.loki/` structure
-  2. Discovery - Parse PRD, competitive research
-  3. Architecture - Tech stack selection
-  4. Infrastructure - Cloud provisioning, CI/CD
-  5. Development - TDD implementation with parallel code review
-  6. QA - 14 quality gates
-  7. Deployment - Blue-green, canary releases
-  8. Business Operations - Marketing, sales, legal setup
-  9. Growth Loop - Continuous optimization
-
-- **Parallel Code Review** - 3 reviewers running simultaneously:
-  - Code quality reviewer
-  - Business logic reviewer
-  - Security reviewer
-
-- **State Recovery** - Checkpoint-based recovery for rate limits:
-  - Automatic checkpointing
-  - Orphaned task detection and re-queuing
-  - Agent heartbeat monitoring
-
-- **Deployment Support** for multiple platforms:
-  - Vercel, Netlify, Railway, Render
-  - AWS (ECS, Lambda, RDS)
-  - GCP (Cloud Run, GKE)
-  - Azure (Container Apps)
-  - Kubernetes (manifests, Helm charts)
-
-- **Reference Documentation**:
-  - `references/agents.md` - Complete agent definitions
-  - `references/deployment.md` - Cloud deployment guides
-  - `references/business-ops.md` - Business operation workflows
-
-[2.4.0]: https://github.com/asklokesh/loki-mode/compare/v2.3.0...v2.4.0
-[2.3.0]: https://github.com/asklokesh/loki-mode/compare/v2.2.0...v2.3.0
-[2.2.0]: https://github.com/asklokesh/loki-mode/compare/v2.1.0...v2.2.0
-[2.1.0]: https://github.com/asklokesh/loki-mode/compare/v2.0.3...v2.1.0
-[2.0.3]: https://github.com/asklokesh/loki-mode/compare/v2.0.2...v2.0.3
-[2.0.2]: https://github.com/asklokesh/loki-mode/compare/v2.0.1...v2.0.2
-[2.0.1]: https://github.com/asklokesh/loki-mode/compare/v2.0.0...v2.0.1
-[2.0.0]: https://github.com/asklokesh/loki-mode/compare/v1.1.0...v2.0.0
-[1.1.0]: https://github.com/asklokesh/loki-mode/compare/v1.0.1...v1.1.0
-[1.0.1]: https://github.com/asklokesh/loki-mode/compare/v1.0.0...v1.0.1
-[1.0.0]: https://github.com/asklokesh/loki-mode/releases/tag/v1.0.0