nlptoolkit-classification 1.0.8 → 1.0.9

package/dist/Model/NeuralNetwork/NeuralNetworkModel.js

@@ -1,215 +1,211 @@
-(function (factory) {
-    if (typeof module === "object" && typeof module.exports === "object") {
-        var v = factory(require, exports);
-        if (v !== undefined) module.exports = v;
+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.NeuralNetworkModel = void 0;
+const ValidatedModel_1 = require("../ValidatedModel");
+const Vector_1 = require("nlptoolkit-math/dist/Vector");
+const Matrix_1 = require("nlptoolkit-math/dist/Matrix");
+const ActivationFunction_1 = require("../../Parameter/ActivationFunction");
+const CompositeInstance_1 = require("../../Instance/CompositeInstance");
+class NeuralNetworkModel extends ValidatedModel_1.ValidatedModel {
+    classLabels;
+    K;
+    d;
+    x;
+    y;
+    r;
+    /**
+     * Constructor that sets the class labels, their sizes as K and the size of the continuous attributes as d.
+     *
+     * @param trainSet {@link InstanceList} to use as train set.
+     */
+    initialize(trainSet) {
+        if (trainSet != undefined) {
+            this.classLabels = trainSet.getDistinctClassLabels();
+            this.K = this.classLabels.length;
+            this.d = trainSet.get(0).continuousAttributeSize();
+        }
     }
-    else if (typeof define === "function" && define.amd) {
-        define(["require", "exports", "../ValidatedModel", "nlptoolkit-math/dist/Vector", "nlptoolkit-math/dist/Matrix", "../../Parameter/ActivationFunction", "../../Instance/CompositeInstance"], factory);
+    /**
+     * The allocateLayerWeights method returns a new {@link Matrix} with random weights.
+     *
+     * @param row    Number of rows.
+     * @param column Number of columns.
+     * @param random Random function to set weights.
+     * @return Matrix with random weights.
+     */
+    allocateLayerWeights(row, column, random) {
+        return new Matrix_1.Matrix(row, column, -0.01, +0.01, random);
     }
-})(function (require, exports) {
-    "use strict";
-    Object.defineProperty(exports, "__esModule", { value: true });
-    exports.NeuralNetworkModel = void 0;
-    const ValidatedModel_1 = require("../ValidatedModel");
-    const Vector_1 = require("nlptoolkit-math/dist/Vector");
-    const Matrix_1 = require("nlptoolkit-math/dist/Matrix");
-    const ActivationFunction_1 = require("../../Parameter/ActivationFunction");
-    const CompositeInstance_1 = require("../../Instance/CompositeInstance");
-    class NeuralNetworkModel extends ValidatedModel_1.ValidatedModel {
-        /**
-         * Constructor that sets the class labels, their sizes as K and the size of the continuous attributes as d.
-         *
-         * @param trainSet {@link InstanceList} to use as train set.
-         */
-        initialize(trainSet) {
-            if (trainSet != undefined) {
-                this.classLabels = trainSet.getDistinctClassLabels();
-                this.K = this.classLabels.length;
-                this.d = trainSet.get(0).continuousAttributeSize();
-            }
-        }
-        /**
-         * The allocateLayerWeights method returns a new {@link Matrix} with random weights.
-         *
-         * @param row    Number of rows.
-         * @param column Number of columns.
-         * @param random Random function to set weights.
-         * @return Matrix with random weights.
-         */
-        allocateLayerWeights(row, column, random) {
-            return new Matrix_1.Matrix(row, column, -0.01, +0.01, random);
+    /**
+     * The normalizeOutput method takes an input {@link Vector} o, gets the result for e^o of each element of o,
+     * then sums them up. At the end, divides each e^o by the summation.
+     *
+     * @param o Vector to normalize.
+     * @return Normalized vector.
+     */
+    normalizeOutput(o) {
+        let sum = 0.0;
+        let values = new Array();
+        for (let i = 0; i < o.size(); i++) {
+            sum += Math.exp(o.getValue(i));
         }
-        /**
-         * The normalizeOutput method takes an input {@link Vector} o, gets the result for e^o of each element of o,
-         * then sums them up. At the end, divides each e^o by the summation.
-         *
-         * @param o Vector to normalize.
-         * @return Normalized vector.
-         */
-        normalizeOutput(o) {
-            let sum = 0.0;
-            let values = new Array();
-            for (let i = 0; i < o.size(); i++) {
-                sum += Math.exp(o.getValue(i));
-            }
-            for (let i = 0; i < o.size(); i++) {
-                values.push(Math.exp(o.getValue(i)) / sum);
-            }
-            return new Vector_1.Vector(values);
+        for (let i = 0; i < o.size(); i++) {
+            values.push(Math.exp(o.getValue(i)) / sum);
         }
-        /**
-         * The createInputVector method takes an {@link Instance} as an input. It converts given Instance to the {@link Vector}
-         * and insert 1.0 to the first element.
-         *
-         * @param instance Instance to insert 1.0.
-         */
-        createInputVector(instance) {
-            this.x = instance.toVector();
-            this.x.insert(0, 1.0);
+        return new Vector_1.Vector(values);
+    }
+    /**
+     * The createInputVector method takes an {@link Instance} as an input. It converts given Instance to the {@link Vector}
+     * and insert 1.0 to the first element.
+     *
+     * @param instance Instance to insert 1.0.
+     */
+    createInputVector(instance) {
+        this.x = instance.toVector();
+        this.x.insert(0, 1.0);
+    }
+    /**
+     * The calculateHidden method takes a {@link Vector} input and {@link Matrix} weights, It multiplies the weights
+     * Matrix with given input Vector than applies the sigmoid function and returns the result.
+     *
+     * @param input   Vector to multiply weights.
+     * @param weights Matrix is multiplied with input Vector.
+     * @param activationFunction Activation function.
+     * @return Result of sigmoid function.
+     */
+    calculateHidden(input, weights, activationFunction) {
+        let z = weights.multiplyWithVectorFromRight(input);
+        switch (activationFunction) {
+            case ActivationFunction_1.ActivationFunction.SIGMOID:
+            default:
+                z.sigmoid();
+                break;
+            case ActivationFunction_1.ActivationFunction.TANH:
+                z.tanh();
+                break;
+            case ActivationFunction_1.ActivationFunction.RELU:
+                z.relu();
+                break;
         }
-        /**
-         * The calculateHidden method takes a {@link Vector} input and {@link Matrix} weights, It multiplies the weights
-         * Matrix with given input Vector than applies the sigmoid function and returns the result.
-         *
-         * @param input   Vector to multiply weights.
-         * @param weights Matrix is multiplied with input Vector.
-         * @param activationFunction Activation function.
-         * @return Result of sigmoid function.
-         */
-        calculateHidden(input, weights, activationFunction) {
-            let z = weights.multiplyWithVectorFromRight(input);
-            switch (activationFunction) {
-                case ActivationFunction_1.ActivationFunction.SIGMOID:
-                default:
-                    z.sigmoid();
-                    break;
-                case ActivationFunction_1.ActivationFunction.TANH:
-                    z.tanh();
-                    break;
-                case ActivationFunction_1.ActivationFunction.RELU:
-                    z.relu();
-                    break;
+        return z;
+    }
+    /**
+     * The calculateOneMinusHidden method takes a {@link Vector} as input. It creates a Vector of ones and
+     * returns the difference between given Vector.
+     *
+     * @param hidden Vector to find difference.
+     * @return Returns the difference between one's Vector and input Vector.
+     */
+    calculateOneMinusHidden(hidden) {
+        let one = new Vector_1.Vector(hidden.size(), 1.0);
+        return one.difference(hidden);
+    }
+    /**
+     * The calculateForwardSingleHiddenLayer method takes two matrices W and V. First it multiplies W with x, then
+     * multiplies V with the result of the previous multiplication.
+     *
+     * @param W Matrix to multiply with x.
+     * @param V Matrix to multiply.
+     * @param activationFunction Activation function.
+     */
+    calculateForwardSingleHiddenLayer(W, V, activationFunction) {
+        let hidden = this.calculateHidden(this.x, W, activationFunction);
+        let hiddenBiased = hidden.biased();
+        this.y = V.multiplyWithVectorFromRight(hiddenBiased);
+    }
+    /**
+     * The calculateRMinusY method creates a new {@link Vector} with given Instance, then it multiplies given
+     * input Vector with given weights Matrix. After normalizing the output, it returns the difference between the newly created
+     * Vector and normalized output.
+     *
+     * @param instance Instance is used to get class labels.
+     * @param input    Vector to multiply weights.
+     * @param weights  Matrix of weights/
+     * @return Difference between newly created Vector and normalized output.
+     */
+    calculateRMinusY(instance, input, weights) {
+        this.r = new Vector_1.Vector(this.K, 1.0, this.classLabels.indexOf(instance.getClassLabel()));
+        let o = weights.multiplyWithVectorFromRight(input);
+        this.y = this.normalizeOutput(o);
+        return this.r.difference(this.y);
+    }
+    /**
+     * The predictWithCompositeInstance method takes an ArrayList possibleClassLabels. It returns the class label
+     * which has the maximum value of y.
+     *
+     * @param possibleClassLabels ArrayList that has the class labels.
+     * @return The class label which has the maximum value of y.
+     */
+    predictWithCompositeInstance(possibleClassLabels) {
+        let predictedClass = possibleClassLabels[0];
+        let maxY = Number.NEGATIVE_INFINITY;
+        for (let i = 0; i < this.classLabels.length; i++) {
+            if (possibleClassLabels.includes(this.classLabels[i]) && this.y.getValue(i) > maxY) {
+                maxY = this.y.getValue(i);
+                predictedClass = this.classLabels[i];
             }
-            return z;
-        }
-        /**
-         * The calculateOneMinusHidden method takes a {@link Vector} as input. It creates a Vector of ones and
-         * returns the difference between given Vector.
-         *
-         * @param hidden Vector to find difference.
-         * @return Returns the difference between one's Vector and input Vector.
-         */
-        calculateOneMinusHidden(hidden) {
-            let one = new Vector_1.Vector(hidden.size(), 1.0);
-            return one.difference(hidden);
         }
-        /**
-         * The calculateForwardSingleHiddenLayer method takes two matrices W and V. First it multiplies W with x, then
-         * multiplies V with the result of the previous multiplication.
-         *
-         * @param W Matrix to multiply with x.
-         * @param V Matrix to multiply.
-         * @param activationFunction Activation function.
-         */
-        calculateForwardSingleHiddenLayer(W, V, activationFunction) {
-            let hidden = this.calculateHidden(this.x, W, activationFunction);
-            let hiddenBiased = hidden.biased();
-            this.y = V.multiplyWithVectorFromRight(hiddenBiased);
-        }
-        /**
-         * The calculateRMinusY method creates a new {@link Vector} with given Instance, then it multiplies given
-         * input Vector with given weights Matrix. After normalizing the output, it returns the difference between the newly created
-         * Vector and normalized output.
-         *
-         * @param instance Instance is used to get class labels.
-         * @param input    Vector to multiply weights.
-         * @param weights  Matrix of weights/
-         * @return Difference between newly created Vector and normalized output.
-         */
-        calculateRMinusY(instance, input, weights) {
-            this.r = new Vector_1.Vector(this.K, 1.0, this.classLabels.indexOf(instance.getClassLabel()));
-            let o = weights.multiplyWithVectorFromRight(input);
-            this.y = this.normalizeOutput(o);
-            return this.r.difference(this.y);
-        }
-        /**
-         * The predictWithCompositeInstance method takes an ArrayList possibleClassLabels. It returns the class label
-         * which has the maximum value of y.
-         *
-         * @param possibleClassLabels ArrayList that has the class labels.
-         * @return The class label which has the maximum value of y.
-         */
-        predictWithCompositeInstance(possibleClassLabels) {
-            let predictedClass = possibleClassLabels[0];
-            let maxY = Number.NEGATIVE_INFINITY;
-            for (let i = 0; i < this.classLabels.length; i++) {
-                if (possibleClassLabels.includes(this.classLabels[i]) && this.y.getValue(i) > maxY) {
-                    maxY = this.y.getValue(i);
-                    predictedClass = this.classLabels[i];
-                }
-            }
-            return predictedClass;
+        return predictedClass;
+    }
+    /**
+     * The predict method takes an {@link Instance} as an input, converts it to a Vector and calculates the {@link Matrix} y by
+     * multiplying Matrix W with {@link Vector} x. Then it returns the class label which has the maximum y value.
+     *
+     * @param instance Instance to predict.
+     * @return The class label which has the maximum y.
+     */
+    predict(instance) {
+        this.createInputVector(instance);
+        this.calculateOutput();
+        if (instance instanceof CompositeInstance_1.CompositeInstance) {
+            return this.predictWithCompositeInstance(instance.getPossibleClassLabels());
         }
-        /**
-         * The predict method takes an {@link Instance} as an input, converts it to a Vector and calculates the {@link Matrix} y by
-         * multiplying Matrix W with {@link Vector} x. Then it returns the class label which has the maximum y value.
-         *
-         * @param instance Instance to predict.
-         * @return The class label which has the maximum y.
-         */
-        predict(instance) {
-            this.createInputVector(instance);
-            this.calculateOutput();
-            if (instance instanceof CompositeInstance_1.CompositeInstance) {
-                return this.predictWithCompositeInstance(instance.getPossibleClassLabels());
-            }
-            else {
-                return this.classLabels[this.y.maxIndex()];
-            }
+        else {
+            return this.classLabels[this.y.maxIndex()];
         }
-        /**
-         * Calculates the posterior probability distribution for the given instance according to neural network model.
-         * @param instance Instance for which posterior probability distribution is calculated.
-         * @return Posterior probability distribution for the given instance.
-         */
-        predictProbability(instance) {
-            this.createInputVector(instance);
-            this.calculateOutput();
-            let result = new Map();
-            for (let i = 0; i < this.classLabels.length; i++) {
-                result.set(this.classLabels[i], this.y.getValue(i));
-            }
-            return result;
+    }
+    /**
+     * Calculates the posterior probability distribution for the given instance according to neural network model.
+     * @param instance Instance for which posterior probability distribution is calculated.
+     * @return Posterior probability distribution for the given instance.
+     */
+    predictProbability(instance) {
+        this.createInputVector(instance);
+        this.calculateOutput();
+        let result = new Map();
+        for (let i = 0; i < this.classLabels.length; i++) {
+            result.set(this.classLabels[i], this.y.getValue(i));
         }
-        /**
-         * Loads the class labels from input model file.
-         * @param input Input model file.
-         */
-        loadClassLabels(input) {
-            let items = input.readLine().split(" ");
-            this.K = parseInt(items[0]);
-            this.d = parseInt(items[1]);
-            this.classLabels = new Array();
-            for (let i = 0; i < this.K; i++) {
-                this.classLabels.push(input.readLine());
-            }
+        return result;
+    }
+    /**
+     * Loads the class labels from input model file.
+     * @param input Input model file.
+     */
+    loadClassLabels(input) {
+        let items = input.readLine().split(" ");
+        this.K = parseInt(items[0]);
+        this.d = parseInt(items[1]);
+        this.classLabels = new Array();
+        for (let i = 0; i < this.K; i++) {
+            this.classLabels.push(input.readLine());
         }
-        /**
-         * Loads the activation function from an input model file.
-         * @param input Input model file.
-         * @return Activation function read.
-         */
-        loadActivationFunction(input) {
-            switch (input.readLine()) {
-                case "TANH":
-                    return ActivationFunction_1.ActivationFunction.TANH;
-                case "RELU":
-                    return ActivationFunction_1.ActivationFunction.RELU;
-                default:
-                    return ActivationFunction_1.ActivationFunction.SIGMOID;
-            }
+    }
+    /**
+     * Loads the activation function from an input model file.
+     * @param input Input model file.
+     * @return Activation function read.
+     */
+    loadActivationFunction(input) {
+        switch (input.readLine()) {
+            case "TANH":
+                return ActivationFunction_1.ActivationFunction.TANH;
+            case "RELU":
+                return ActivationFunction_1.ActivationFunction.RELU;
+            default:
+                return ActivationFunction_1.ActivationFunction.SIGMOID;
         }
     }
-    exports.NeuralNetworkModel = NeuralNetworkModel;
-});
+}
+exports.NeuralNetworkModel = NeuralNetworkModel;
 //# sourceMappingURL=NeuralNetworkModel.js.map

package/dist/Model/NeuralNetwork/NeuralNetworkModel.js.map

@@ -1 +1 @@
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package/dist/Model/NonParametric/KnnInstance.js

@@ -1,33 +1,25 @@
-(function (factory) {
-    if (typeof module === "object" && typeof module.exports === "object") {
-        var v = factory(require, exports);
-        if (v !== undefined) module.exports = v;
+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.KnnInstance = void 0;
+class KnnInstance {
+    distance;
+    instance;
+    /**
+     * The constructor that sets the instance and distance value.
+     *
+     * @param instance {@link Instance} input.
+     * @param distance Double distance value.
+     */
+    constructor(instance, distance) {
+        this.instance = instance;
+        this.distance = distance;
     }
-    else if (typeof define === "function" && define.amd) {
-        define(["require", "exports"], factory);
+    getInstance() {
+        return this.instance;
     }
-})(function (require, exports) {
-    "use strict";
-    Object.defineProperty(exports, "__esModule", { value: true });
-    exports.KnnInstance = void 0;
-    class KnnInstance {
-        /**
-         * The constructor that sets the instance and distance value.
-         *
-         * @param instance {@link Instance} input.
-         * @param distance Double distance value.
-         */
-        constructor(instance, distance) {
-            this.instance = instance;
-            this.distance = distance;
-        }
-        getInstance() {
-            return this.instance;
-        }
-        getDistance() {
-            return this.distance;
-        }
+    getDistance() {
+        return this.distance;
     }
-    exports.KnnInstance = KnnInstance;
-});
+}
+exports.KnnInstance = KnnInstance;
 //# sourceMappingURL=KnnInstance.js.map

package/dist/Model/NonParametric/KnnInstance.js.map

@@ -1 +1 @@
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