molstar 4.2.0 → 4.4.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/build/viewer/molstar.css +1 -1
- package/build/viewer/molstar.js +1 -1
- package/lib/apps/docking-viewer/viewport.d.ts +1 -1
- package/lib/apps/docking-viewer/viewport.js +2 -1
- package/lib/apps/mesoscale-explorer/app.d.ts +3 -1
- package/lib/apps/mesoscale-explorer/app.js +12 -1
- package/lib/apps/mesoscale-explorer/behavior/camera.d.ts +12 -0
- package/lib/apps/mesoscale-explorer/behavior/camera.js +32 -6
- package/lib/apps/mesoscale-explorer/behavior/select.d.ts +1 -0
- package/lib/apps/mesoscale-explorer/behavior/select.js +58 -9
- package/lib/apps/mesoscale-explorer/data/cellpack/model.js +4 -6
- package/lib/apps/mesoscale-explorer/data/cellpack/preset.js +8 -5
- package/lib/apps/mesoscale-explorer/data/generic/model.d.ts +1 -0
- package/lib/apps/mesoscale-explorer/data/generic/model.js +2 -1
- package/lib/apps/mesoscale-explorer/data/generic/preset.js +7 -6
- package/lib/apps/mesoscale-explorer/data/mmcif/model.js +3 -1
- package/lib/apps/mesoscale-explorer/data/mmcif/preset.js +6 -3
- package/lib/apps/mesoscale-explorer/data/petworld/model.js +3 -1
- package/lib/apps/mesoscale-explorer/data/petworld/preset.js +6 -3
- package/lib/apps/mesoscale-explorer/data/state.d.ts +48 -10
- package/lib/apps/mesoscale-explorer/data/state.js +83 -8
- package/lib/apps/mesoscale-explorer/index.html +6 -1
- package/lib/apps/mesoscale-explorer/style.scss +33 -0
- package/lib/apps/mesoscale-explorer/ui/entities.d.ts +23 -1
- package/lib/apps/mesoscale-explorer/ui/entities.js +301 -32
- package/lib/apps/mesoscale-explorer/ui/panels.d.ts +1 -0
- package/lib/apps/mesoscale-explorer/ui/panels.js +42 -5
- package/lib/apps/mesoscale-explorer/ui/states.d.ts +60 -2
- package/lib/apps/mesoscale-explorer/ui/states.js +471 -11
- package/lib/apps/viewer/app.d.ts +12 -5
- package/lib/apps/viewer/app.js +30 -1
- package/lib/commonjs/apps/docking-viewer/viewport.d.ts +1 -1
- package/lib/commonjs/apps/docking-viewer/viewport.js +2 -1
- package/lib/commonjs/apps/mesoscale-explorer/app.d.ts +3 -1
- package/lib/commonjs/apps/mesoscale-explorer/app.js +12 -1
- package/lib/commonjs/apps/mesoscale-explorer/behavior/camera.d.ts +12 -0
- package/lib/commonjs/apps/mesoscale-explorer/behavior/camera.js +34 -8
- package/lib/commonjs/apps/mesoscale-explorer/behavior/select.d.ts +1 -0
- package/lib/commonjs/apps/mesoscale-explorer/behavior/select.js +58 -9
- package/lib/commonjs/apps/mesoscale-explorer/data/cellpack/model.js +4 -6
- package/lib/commonjs/apps/mesoscale-explorer/data/cellpack/preset.js +8 -6
- package/lib/commonjs/apps/mesoscale-explorer/data/generic/model.d.ts +1 -0
- package/lib/commonjs/apps/mesoscale-explorer/data/generic/model.js +2 -1
- package/lib/commonjs/apps/mesoscale-explorer/data/generic/preset.js +9 -9
- package/lib/commonjs/apps/mesoscale-explorer/data/mmcif/model.js +3 -1
- package/lib/commonjs/apps/mesoscale-explorer/data/mmcif/preset.js +6 -4
- package/lib/commonjs/apps/mesoscale-explorer/data/petworld/model.js +3 -1
- package/lib/commonjs/apps/mesoscale-explorer/data/petworld/preset.js +6 -4
- package/lib/commonjs/apps/mesoscale-explorer/data/state.d.ts +48 -10
- package/lib/commonjs/apps/mesoscale-explorer/data/state.js +107 -28
- package/lib/commonjs/apps/mesoscale-explorer/data/util.js +2 -3
- package/lib/commonjs/apps/mesoscale-explorer/ui/entities.d.ts +23 -1
- package/lib/commonjs/apps/mesoscale-explorer/ui/entities.js +302 -30
- package/lib/commonjs/apps/mesoscale-explorer/ui/panels.d.ts +1 -0
- package/lib/commonjs/apps/mesoscale-explorer/ui/panels.js +39 -2
- package/lib/commonjs/apps/mesoscale-explorer/ui/states.d.ts +60 -2
- package/lib/commonjs/apps/mesoscale-explorer/ui/states.js +477 -13
- package/lib/commonjs/apps/viewer/app.d.ts +12 -5
- package/lib/commonjs/apps/viewer/app.js +29 -0
- package/lib/commonjs/cli/chem-comp-dict/util.js +7 -7
- package/lib/commonjs/cli/cif2bcif/converter.js +1 -2
- package/lib/commonjs/cli/cifschema/util/cif-dic.js +2 -3
- package/lib/commonjs/cli/cifschema/util/generate.js +1 -2
- package/lib/commonjs/cli/cifschema/util/helper.js +1 -2
- package/lib/commonjs/cli/cifschema/util/schema.js +9 -10
- package/lib/commonjs/cli/state-docs/pd-to-md.js +1 -2
- package/lib/commonjs/cli/structure-info/helpers.js +2 -3
- package/lib/commonjs/cli/structure-info/model.js +11 -12
- package/lib/commonjs/examples/alpha-orbitals/controls.js +1 -2
- package/lib/commonjs/examples/basic-wrapper/custom-theme.js +2 -2
- package/lib/commonjs/examples/basic-wrapper/superposition.js +3 -3
- package/lib/commonjs/examples/domain-annotation-server/mapping.js +1 -2
- package/lib/commonjs/examples/lighting/index.d.ts +1 -1
- package/lib/commonjs/examples/lighting/index.js +2 -1
- package/lib/commonjs/examples/proteopedia-wrapper/coloring.d.ts +5 -20
- package/lib/commonjs/examples/proteopedia-wrapper/coloring.js +1 -2
- package/lib/commonjs/examples/proteopedia-wrapper/ui/controls.js +1 -2
- package/lib/commonjs/examples/task.js +6 -6
- package/lib/commonjs/extensions/alpha-orbitals/collocation.js +1 -2
- package/lib/commonjs/extensions/alpha-orbitals/data-model.js +4 -5
- package/lib/commonjs/extensions/alpha-orbitals/density.js +2 -3
- package/lib/commonjs/extensions/alpha-orbitals/gpu/compute.js +2 -3
- package/lib/commonjs/extensions/alpha-orbitals/orbitals.js +2 -3
- package/lib/commonjs/extensions/alpha-orbitals/spherical-functions.js +2 -2
- package/lib/commonjs/extensions/alpha-orbitals/transforms.d.ts +3 -3
- package/lib/commonjs/extensions/anvil/algorithm.js +5 -5
- package/lib/commonjs/extensions/anvil/behavior.d.ts +1 -0
- package/lib/commonjs/extensions/anvil/behavior.js +2 -2
- package/lib/commonjs/extensions/anvil/representation.d.ts +4 -0
- package/lib/commonjs/extensions/anvil/representation.js +3 -3
- package/lib/commonjs/extensions/assembly-symmetry/behavior.d.ts +1 -0
- package/lib/commonjs/extensions/assembly-symmetry/behavior.js +3 -3
- package/lib/commonjs/extensions/assembly-symmetry/color.d.ts +2 -2
- package/lib/commonjs/extensions/assembly-symmetry/color.js +3 -3
- package/lib/commonjs/extensions/assembly-symmetry/prop.js +3 -3
- package/lib/commonjs/extensions/assembly-symmetry/representation.d.ts +1 -0
- package/lib/commonjs/extensions/assembly-symmetry/representation.js +2 -2
- package/lib/commonjs/extensions/dnatco/confal-pyramids/behavior.js +2 -2
- package/lib/commonjs/extensions/dnatco/confal-pyramids/color.js +3 -3
- package/lib/commonjs/extensions/dnatco/confal-pyramids/representation.d.ts +3 -0
- package/lib/commonjs/extensions/dnatco/confal-pyramids/representation.js +3 -3
- package/lib/commonjs/extensions/dnatco/ntc-tube/behavior.js +2 -2
- package/lib/commonjs/extensions/dnatco/ntc-tube/color.js +3 -3
- package/lib/commonjs/extensions/dnatco/ntc-tube/representation.d.ts +3 -0
- package/lib/commonjs/extensions/dnatco/ntc-tube/representation.js +3 -3
- package/lib/commonjs/extensions/g3d/data.js +2 -3
- package/lib/commonjs/extensions/g3d/format.d.ts +3 -3
- package/lib/commonjs/extensions/g3d/model.js +5 -5
- package/lib/commonjs/extensions/geo-export/mesh-exporter.d.ts +2 -2
- package/lib/commonjs/extensions/geo-export/ui.d.ts +0 -1
- package/lib/commonjs/extensions/meshes/examples.js +9 -9
- package/lib/commonjs/extensions/meshes/mesh-extension.d.ts +3 -5
- package/lib/commonjs/extensions/meshes/mesh-extension.js +2 -2
- package/lib/commonjs/extensions/meshes/mesh-streaming/behavior.d.ts +3 -3
- package/lib/commonjs/extensions/meshes/mesh-streaming/server-info.d.ts +3 -3
- package/lib/commonjs/extensions/meshes/mesh-utils.js +9 -9
- package/lib/commonjs/extensions/model-archive/quality-assessment/color/plddt.d.ts +1 -1
- package/lib/commonjs/extensions/model-archive/quality-assessment/color/plddt.js +11 -8
- package/lib/commonjs/extensions/model-archive/quality-assessment/color/qmean.js +3 -3
- package/lib/commonjs/extensions/model-export/export.js +2 -2
- package/lib/commonjs/extensions/model-export/ui.d.ts +0 -1
- package/lib/commonjs/extensions/mp4-export/controls.d.ts +1 -1
- package/lib/commonjs/extensions/mp4-export/encoder.js +2 -3
- package/lib/commonjs/extensions/mp4-export/ui.d.ts +0 -1
- package/lib/commonjs/extensions/mvs/camera.js +4 -5
- package/lib/commonjs/extensions/mvs/components/annotation-color-theme.js +2 -2
- package/lib/commonjs/extensions/mvs/components/annotation-label/representation.d.ts +32 -34
- package/lib/commonjs/extensions/mvs/components/annotation-label/representation.js +2 -2
- package/lib/commonjs/extensions/mvs/components/annotation-label/visual.d.ts +16 -16
- package/lib/commonjs/extensions/mvs/components/annotation-label/visual.js +2 -2
- package/lib/commonjs/extensions/mvs/components/annotation-prop.js +2 -2
- package/lib/commonjs/extensions/mvs/components/annotation-structure-component.js +4 -4
- package/lib/commonjs/extensions/mvs/components/custom-label/representation.d.ts +32 -32
- package/lib/commonjs/extensions/mvs/components/custom-label/representation.js +2 -2
- package/lib/commonjs/extensions/mvs/components/custom-label/visual.d.ts +16 -16
- package/lib/commonjs/extensions/mvs/components/custom-label/visual.js +2 -2
- package/lib/commonjs/extensions/mvs/components/formats.d.ts +6 -6
- package/lib/commonjs/extensions/mvs/components/formats.js +2 -2
- package/lib/commonjs/extensions/mvs/components/is-mvs-model-prop.js +3 -3
- package/lib/commonjs/extensions/mvs/components/multilayer-color-theme.js +3 -3
- package/lib/commonjs/extensions/mvs/components/selector.js +3 -3
- package/lib/commonjs/extensions/mvs/helpers/indexing.d.ts +2 -2
- package/lib/commonjs/extensions/mvs/helpers/label-text.js +1 -2
- package/lib/commonjs/extensions/mvs/helpers/param-definition.js +2 -3
- package/lib/commonjs/extensions/mvs/helpers/schemas.d.ts +1 -1
- package/lib/commonjs/extensions/mvs/helpers/schemas.js +2 -2
- package/lib/commonjs/extensions/mvs/helpers/selections.js +6 -7
- package/lib/commonjs/extensions/mvs/helpers/utils.d.ts +1 -1
- package/lib/commonjs/extensions/mvs/helpers/utils.js +7 -7
- package/lib/commonjs/extensions/mvs/load-helpers.d.ts +1 -1
- package/lib/commonjs/extensions/mvs/load-helpers.js +17 -17
- package/lib/commonjs/extensions/mvs/load.js +1 -2
- package/lib/commonjs/extensions/mvs/tree/generic/params-schema.js +8 -8
- package/lib/commonjs/extensions/mvs/tree/generic/tree-schema.js +8 -9
- package/lib/commonjs/extensions/mvs/tree/generic/tree-utils.js +10 -11
- package/lib/commonjs/extensions/mvs/tree/molstar/conversion.js +4 -4
- package/lib/commonjs/extensions/mvs/tree/mvs/mvs-builder.d.ts +0 -2
- package/lib/commonjs/extensions/mvs/tree/mvs/mvs-builder.js +3 -3
- package/lib/commonjs/extensions/pdbe/structure-quality-report/color.js +2 -2
- package/lib/commonjs/extensions/rcsb/validation-report/color/density-fit.js +2 -2
- package/lib/commonjs/extensions/rcsb/validation-report/color/geometry-quality.js +3 -3
- package/lib/commonjs/extensions/rcsb/validation-report/color/random-coil-index.js +2 -2
- package/lib/commonjs/extensions/rcsb/validation-report/representation.d.ts +5 -0
- package/lib/commonjs/extensions/rcsb/validation-report/representation.js +5 -5
- package/lib/commonjs/extensions/sb-ncbr/index.d.ts +8 -0
- package/lib/commonjs/extensions/sb-ncbr/index.js +14 -1
- package/lib/commonjs/extensions/sb-ncbr/partial-charges/color.js +3 -3
- package/lib/commonjs/extensions/sb-ncbr/partial-charges/labels.js +1 -2
- package/lib/commonjs/extensions/sb-ncbr/partial-charges/property.js +2 -2
- package/lib/commonjs/extensions/sb-ncbr/tunnels/actions.d.ts +20 -0
- package/lib/commonjs/extensions/sb-ncbr/tunnels/actions.js +89 -0
- package/lib/commonjs/extensions/sb-ncbr/tunnels/algorithm.d.ts +26 -0
- package/lib/commonjs/extensions/sb-ncbr/tunnels/algorithm.js +473 -0
- package/lib/commonjs/extensions/sb-ncbr/tunnels/behavior.d.ts +40 -0
- package/lib/commonjs/extensions/sb-ncbr/tunnels/behavior.js +96 -0
- package/lib/commonjs/extensions/sb-ncbr/tunnels/data-model.d.ts +146 -0
- package/lib/commonjs/extensions/sb-ncbr/tunnels/data-model.js +28 -0
- package/lib/commonjs/extensions/sb-ncbr/tunnels/examples.d.ts +12 -0
- package/lib/commonjs/extensions/sb-ncbr/tunnels/examples.js +54 -0
- package/lib/commonjs/extensions/sb-ncbr/tunnels/props.d.ts +19 -0
- package/lib/commonjs/extensions/sb-ncbr/tunnels/props.js +26 -0
- package/lib/commonjs/extensions/sb-ncbr/tunnels/representation.d.ts +29 -0
- package/lib/commonjs/extensions/sb-ncbr/tunnels/representation.js +99 -0
- package/lib/commonjs/extensions/volumes-and-segmentations/entry-root.d.ts +3 -3
- package/lib/commonjs/extensions/volumes-and-segmentations/entry-root.js +3 -3
- package/lib/commonjs/extensions/volumes-and-segmentations/entry-state.d.ts +3 -3
- package/lib/commonjs/extensions/volumes-and-segmentations/external-api.js +2 -3
- package/lib/commonjs/extensions/volumes-and-segmentations/global-state.d.ts +3 -3
- package/lib/commonjs/extensions/volumes-and-segmentations/helpers.js +6 -6
- package/lib/commonjs/extensions/volumes-and-segmentations/ui.d.ts +0 -1
- package/lib/commonjs/extensions/zenodo/ui.d.ts +0 -1
- package/lib/commonjs/mol-canvas3d/camera/transition.d.ts +1 -1
- package/lib/commonjs/mol-canvas3d/camera/transition.js +23 -6
- package/lib/commonjs/mol-canvas3d/camera/util.js +3 -4
- package/lib/commonjs/mol-canvas3d/canvas3d.d.ts +26 -1
- package/lib/commonjs/mol-canvas3d/canvas3d.js +4 -0
- package/lib/commonjs/mol-canvas3d/helper/bounding-sphere-helper.d.ts +1 -6
- package/lib/commonjs/mol-canvas3d/helper/camera-helper.js +2 -2
- package/lib/commonjs/mol-canvas3d/helper/handle-helper.d.ts +1 -0
- package/lib/commonjs/mol-canvas3d/helper/handle-helper.js +2 -2
- package/lib/commonjs/mol-canvas3d/helper/helper.d.ts +2 -0
- package/lib/commonjs/mol-canvas3d/passes/dof.d.ts +34 -0
- package/lib/commonjs/mol-canvas3d/passes/dof.js +167 -0
- package/lib/commonjs/mol-canvas3d/passes/draw.d.ts +2 -0
- package/lib/commonjs/mol-canvas3d/passes/draw.js +31 -8
- package/lib/commonjs/mol-canvas3d/passes/image.d.ts +10 -0
- package/lib/commonjs/mol-canvas3d/passes/multi-sample.d.ts +2 -1
- package/lib/commonjs/mol-canvas3d/passes/multi-sample.js +4 -3
- package/lib/commonjs/mol-canvas3d/passes/postprocessing.d.ts +9 -0
- package/lib/commonjs/mol-canvas3d/passes/postprocessing.js +12 -2
- package/lib/commonjs/mol-canvas3d/util.js +3 -4
- package/lib/commonjs/mol-data/db/column-helpers.js +6 -7
- package/lib/commonjs/mol-data/db/column.d.ts +1 -1
- package/lib/commonjs/mol-data/generic/hash-set.js +1 -2
- package/lib/commonjs/mol-data/generic/linked-list.js +1 -2
- package/lib/commonjs/mol-data/int/impl/interval.js +15 -15
- package/lib/commonjs/mol-data/int/impl/ordered-set.js +25 -25
- package/lib/commonjs/mol-data/int/impl/segmentation.js +7 -7
- package/lib/commonjs/mol-data/int/impl/sorted-array.js +31 -31
- package/lib/commonjs/mol-data/int/linked-index.js +1 -2
- package/lib/commonjs/mol-data/util/array.js +5 -6
- package/lib/commonjs/mol-data/util/buckets.js +1 -2
- package/lib/commonjs/mol-data/util/combination.js +2 -2
- package/lib/commonjs/mol-data/util/equivalence-classes.js +2 -2
- package/lib/commonjs/mol-data/util/grouping.js +2 -3
- package/lib/commonjs/mol-data/util/hash-functions.js +9 -10
- package/lib/commonjs/mol-data/util/sort.js +5 -6
- package/lib/commonjs/mol-geo/geometry/base.d.ts +1 -1
- package/lib/commonjs/mol-geo/geometry/base.js +3 -3
- package/lib/commonjs/mol-geo/geometry/clipping-data.js +4 -5
- package/lib/commonjs/mol-geo/geometry/color-data.js +4 -5
- package/lib/commonjs/mol-geo/geometry/cylinders/cylinders.d.ts +1 -0
- package/lib/commonjs/mol-geo/geometry/cylinders/cylinders.js +3 -0
- package/lib/commonjs/mol-geo/geometry/direct-volume/direct-volume.d.ts +1 -0
- package/lib/commonjs/mol-geo/geometry/direct-volume/direct-volume.js +3 -0
- package/lib/commonjs/mol-geo/geometry/direct-volume/transfer-function.js +3 -4
- package/lib/commonjs/mol-geo/geometry/emissive-data.js +5 -6
- package/lib/commonjs/mol-geo/geometry/image/image.d.ts +1 -1
- package/lib/commonjs/mol-geo/geometry/lines/lines.d.ts +0 -1
- package/lib/commonjs/mol-geo/geometry/marker-data.js +3 -4
- package/lib/commonjs/mol-geo/geometry/mesh/builder/axes.js +1 -2
- package/lib/commonjs/mol-geo/geometry/mesh/builder/box.js +2 -3
- package/lib/commonjs/mol-geo/geometry/mesh/builder/cylinder.js +4 -5
- package/lib/commonjs/mol-geo/geometry/mesh/builder/ellipsoid.js +1 -2
- package/lib/commonjs/mol-geo/geometry/mesh/builder/ribbon.js +1 -2
- package/lib/commonjs/mol-geo/geometry/mesh/builder/sheet.js +1 -2
- package/lib/commonjs/mol-geo/geometry/mesh/builder/sphere.js +2 -3
- package/lib/commonjs/mol-geo/geometry/mesh/builder/tube.js +1 -2
- package/lib/commonjs/mol-geo/geometry/mesh/color-smoothing.js +7 -8
- package/lib/commonjs/mol-geo/geometry/mesh/mesh.d.ts +1 -0
- package/lib/commonjs/mol-geo/geometry/mesh/mesh.js +3 -0
- package/lib/commonjs/mol-geo/geometry/overpaint-data.js +4 -5
- package/lib/commonjs/mol-geo/geometry/points/points.d.ts +1 -1
- package/lib/commonjs/mol-geo/geometry/size-data.js +9 -9
- package/lib/commonjs/mol-geo/geometry/spheres/spheres.d.ts +1 -0
- package/lib/commonjs/mol-geo/geometry/spheres/spheres.js +3 -0
- package/lib/commonjs/mol-geo/geometry/substance-data.js +4 -5
- package/lib/commonjs/mol-geo/geometry/text/font-atlas.js +3 -3
- package/lib/commonjs/mol-geo/geometry/texture-mesh/color-smoothing.js +7 -7
- package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.d.ts +1 -0
- package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.js +3 -0
- package/lib/commonjs/mol-geo/geometry/transform-data.js +4 -5
- package/lib/commonjs/mol-geo/geometry/transparency-data.js +5 -6
- package/lib/commonjs/mol-geo/primitive/box.js +3 -4
- package/lib/commonjs/mol-geo/primitive/cage.js +3 -4
- package/lib/commonjs/mol-geo/primitive/circle.js +2 -2
- package/lib/commonjs/mol-geo/primitive/cylinder.js +2 -2
- package/lib/commonjs/mol-geo/primitive/dodecahedron.js +3 -3
- package/lib/commonjs/mol-geo/primitive/icosahedron.js +2 -3
- package/lib/commonjs/mol-geo/primitive/octahedron.js +4 -4
- package/lib/commonjs/mol-geo/primitive/plane.js +2 -3
- package/lib/commonjs/mol-geo/primitive/polygon.js +1 -2
- package/lib/commonjs/mol-geo/primitive/polyhedron.js +2 -2
- package/lib/commonjs/mol-geo/primitive/primitive.js +4 -5
- package/lib/commonjs/mol-geo/primitive/prism.js +11 -11
- package/lib/commonjs/mol-geo/primitive/pyramid.js +6 -7
- package/lib/commonjs/mol-geo/primitive/sphere.js +2 -3
- package/lib/commonjs/mol-geo/primitive/spiked-ball.js +1 -2
- package/lib/commonjs/mol-geo/primitive/star.js +2 -2
- package/lib/commonjs/mol-geo/primitive/tetrahedron.js +3 -3
- package/lib/commonjs/mol-geo/primitive/torus.js +2 -2
- package/lib/commonjs/mol-geo/primitive/wedge.js +3 -4
- package/lib/commonjs/mol-geo/util/location-iterator.js +3 -4
- package/lib/commonjs/mol-geo/util/marching-cubes/algorithm.js +2 -3
- package/lib/commonjs/mol-geo/util/marching-cubes/builder.js +2 -3
- package/lib/commonjs/mol-geo/util/marching-cubes/tables.js +3 -3
- package/lib/commonjs/mol-geo/util.js +7 -8
- package/lib/commonjs/mol-gl/compute/grid3d.js +2 -3
- package/lib/commonjs/mol-gl/compute/hi-z.js +1 -2
- package/lib/commonjs/mol-gl/compute/histogram-pyramid/reduction.js +1 -2
- package/lib/commonjs/mol-gl/compute/histogram-pyramid/sum.js +1 -2
- package/lib/commonjs/mol-gl/compute/marching-cubes/active-voxels.js +1 -2
- package/lib/commonjs/mol-gl/compute/marching-cubes/isosurface.js +2 -3
- package/lib/commonjs/mol-gl/compute/marching-cubes/tables.js +2 -3
- package/lib/commonjs/mol-gl/compute/util.js +5 -5
- package/lib/commonjs/mol-gl/render-object.js +3 -3
- package/lib/commonjs/mol-gl/renderable/cylinders.d.ts +1 -0
- package/lib/commonjs/mol-gl/renderable/cylinders.js +3 -2
- package/lib/commonjs/mol-gl/renderable/direct-volume.d.ts +1 -0
- package/lib/commonjs/mol-gl/renderable/direct-volume.js +3 -2
- package/lib/commonjs/mol-gl/renderable/image.js +2 -2
- package/lib/commonjs/mol-gl/renderable/lines.js +2 -2
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- package/lib/servers/volume/common/data-format.d.ts +0 -1
- package/lib/servers/volume/config.d.ts +1 -5
- package/package.json +18 -16
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@@ -113,6 +113,7 @@ var DirectVolume;
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DirectVolume.Params = {
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...base_1.BaseGeometry.Params,
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ignoreLight: param_definition_1.ParamDefinition.Boolean(false, base_1.BaseGeometry.ShadingCategory),
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celShaded: param_definition_1.ParamDefinition.Boolean(false, base_1.BaseGeometry.ShadingCategory),
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xrayShaded: param_definition_1.ParamDefinition.Select(false, [[false, 'Off'], [true, 'On'], ['inverted', 'Inverted']], base_1.BaseGeometry.ShadingCategory),
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controlPoints: param_definition_1.ParamDefinition.LineGraph([
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linear_algebra_1.Vec2.create(0.19, 0.0), linear_algebra_1.Vec2.create(0.2, 0.05), linear_algebra_1.Vec2.create(0.25, 0.05), linear_algebra_1.Vec2.create(0.26, 0.0),
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@@ -218,6 +219,7 @@ var DirectVolume;
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dPackedGroup: directVolume.packedGroup,
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dAxisOrder: mol_util_1.ValueCell.create(directVolume.axisOrder.ref.value.join('')),
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dIgnoreLight: mol_util_1.ValueCell.create(props.ignoreLight),
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dCelShaded: mol_util_1.ValueCell.create(props.celShaded),
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dXrayShaded: mol_util_1.ValueCell.create(props.xrayShaded === 'inverted' ? 'inverted' : props.xrayShaded === true ? 'on' : 'off'),
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};
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}
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@@ -229,6 +231,7 @@ var DirectVolume;
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function updateValues(values, props) {
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base_1.BaseGeometry.updateValues(values, props);
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mol_util_1.ValueCell.updateIfChanged(values.dIgnoreLight, props.ignoreLight);
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mol_util_1.ValueCell.updateIfChanged(values.dCelShaded, props.celShaded);
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mol_util_1.ValueCell.updateIfChanged(values.dXrayShaded, props.xrayShaded === 'inverted' ? 'inverted' : props.xrayShaded === true ? 'on' : 'off');
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const controlPoints = (0, transfer_function_1.getControlPointsFromVec2Array)(props.controlPoints);
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(0, transfer_function_1.createTransferFunctionTexture)(controlPoints, values.tTransferTex);
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* @author Alexander Rose <alexander.rose@weirdbyte.de>
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*/
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Object.defineProperty(exports, "__esModule", { value: true });
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exports.
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exports.getControlPointsFromString = getControlPointsFromString;
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exports.getControlPointsFromVec2Array = getControlPointsFromVec2Array;
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exports.createTransferFunctionTexture = createTransferFunctionTexture;
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const interpolate_1 = require("../../../mol-math/interpolate");
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const mol_util_1 = require("../../../mol-util");
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function getControlPointsFromString(s) {
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@@ -14,11 +16,9 @@ function getControlPointsFromString(s) {
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return { x: parseFloat(ps[0]), alpha: parseFloat(ps[1]) };
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});
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}
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exports.getControlPointsFromString = getControlPointsFromString;
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function getControlPointsFromVec2Array(array) {
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return array.map(v => ({ x: v[0], alpha: v[1] }));
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}
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exports.getControlPointsFromVec2Array = getControlPointsFromVec2Array;
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function createTransferFunctionTexture(controlPoints, texture) {
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const cp = [
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{ x: 0, alpha: 0 },
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@@ -56,4 +56,3 @@ function createTransferFunctionTexture(controlPoints, texture) {
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return mol_util_1.ValueCell.create(textureImage);
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}
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}
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exports.createTransferFunctionTexture = createTransferFunctionTexture;
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* @author Alexander Rose <alexander.rose@weirdbyte.de>
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*/
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Object.defineProperty(exports, "__esModule", { value: true });
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exports.
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exports.applyEmissiveValue = applyEmissiveValue;
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exports.getEmissiveAverage = getEmissiveAverage;
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exports.clearEmissive = clearEmissive;
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exports.createEmissive = createEmissive;
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exports.createEmptyEmissive = createEmptyEmissive;
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const value_cell_1 = require("../../mol-util/value-cell");
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const linear_algebra_1 = require("../../mol-math/linear-algebra");
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const util_1 = require("../../mol-gl/renderable/util");
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@@ -16,7 +20,6 @@ function applyEmissiveValue(array, start, end, value) {
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}
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return true;
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}
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exports.applyEmissiveValue = applyEmissiveValue;
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function getEmissiveAverage(array, count) {
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if (count === 0 || array.length < count)
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return 0;
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@@ -26,11 +29,9 @@ function getEmissiveAverage(array, count) {
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}
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return sum / (255 * count);
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}
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exports.getEmissiveAverage = getEmissiveAverage;
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function clearEmissive(array, start, end) {
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array.fill(0, start, end);
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}
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exports.clearEmissive = clearEmissive;
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function createEmissive(count, type, emissiveData) {
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const emissive = (0, util_1.createTextureImage)(Math.max(1, count), 1, Uint8Array, emissiveData && emissiveData.tEmissive.ref.value.array);
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if (emissiveData) {
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@@ -55,7 +56,6 @@ function createEmissive(count, type, emissiveData) {
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};
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}
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}
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exports.createEmissive = createEmissive;
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const emptyEmissiveTexture = { array: new Uint8Array(1), width: 1, height: 1 };
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function createEmptyEmissive(emissiveData) {
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if (emissiveData) {
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@@ -77,4 +77,3 @@ function createEmptyEmissive(emissiveData) {
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};
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}
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}
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exports.createEmptyEmissive = createEmptyEmissive;
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@@ -16,7 +16,7 @@ export declare const InterpolationTypes: {
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bspline: string;
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};
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export type InterpolationTypes = keyof typeof InterpolationTypes;
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export declare const InterpolationTypeNames:
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export declare const InterpolationTypeNames: InterpolationTypes[];
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export { Image };
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interface Image {
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readonly kind: 'image';
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@@ -42,7 +42,6 @@ export declare namespace Lines {
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alpha: PD.Numeric;
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quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
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material: PD.Group<PD.Normalize<{
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/** Wide line */
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metalness: number;
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roughness: number;
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bumpiness: number;
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* @author Alexander Rose <alexander.rose@weirdbyte.de>
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*/
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Object.defineProperty(exports, "__esModule", { value: true });
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exports.
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exports.getMarkersAverage = getMarkersAverage;
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exports.createMarkers = createMarkers;
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exports.createEmptyMarkers = createEmptyMarkers;
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const value_cell_1 = require("../../mol-util/value-cell");
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const linear_algebra_1 = require("../../mol-math/linear-algebra");
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const util_1 = require("../../mol-gl/renderable/util");
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@@ -55,7 +57,6 @@ function getMarkersAverage(array, count) {
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}
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return sum / count;
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}
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exports.getMarkersAverage = getMarkersAverage;
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function createMarkers(count, type, markerData) {
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const markers = (0, util_1.createTextureImage)(Math.max(1, count), 1, Uint8Array, markerData && markerData.tMarker.ref.value.array);
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const average = getMarkersAverage(markers.array, count);
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@@ -80,7 +81,6 @@ function createMarkers(count, type, markerData) {
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};
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}
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}
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exports.createMarkers = createMarkers;
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const emptyMarkerTexture = { array: new Uint8Array(1), width: 1, height: 1 };
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function createEmptyMarkers(markerData) {
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if (markerData) {
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@@ -102,4 +102,3 @@ function createEmptyMarkers(markerData) {
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};
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}
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}
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exports.createEmptyMarkers = createEmptyMarkers;
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* @author Alexander Rose <alexander.rose@weirdbyte.de>
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*/
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Object.defineProperty(exports, "__esModule", { value: true });
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exports.addAxes =
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exports.addAxes = addAxes;
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const linear_algebra_1 = require("../../../../mol-math/linear-algebra");
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const mesh_builder_1 = require("../mesh-builder");
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const geometry_1 = require("../../../../mol-math/geometry");
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@@ -28,4 +28,3 @@ function addAxes(state, axes, radiusScale, detail, radialSegments) {
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const radius = (Math.cbrt(volume) / 300) * radiusScale;
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mesh_builder_1.MeshBuilder.addCage(state, tmpMatrix, cage, radius, detail, radialSegments);
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}
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exports.addAxes = addAxes;
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*/
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Object.defineProperty(exports, "__esModule", { value: true });
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exports.
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exports.addBoundingBox = addBoundingBox;
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exports.addOrientedBox = addOrientedBox;
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const linear_algebra_1 = require("../../../../mol-math/linear-algebra");
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const geometry_1 = require("../../../../mol-math/geometry");
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const mesh_builder_1 = require("../mesh-builder");
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@@ -57,7 +58,6 @@ function addBoundingBox(state, box, radius, detail, radialSegments) {
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(0, sphere_1.addSphere)(state, tmpEnd, radius, detail);
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(0, cylinder_1.addCylinder)(state, tmpStart, tmpEnd, 1, cylinderProps);
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}
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exports.addBoundingBox = addBoundingBox;
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//
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const tmpBoxVecCorner = (0, linear_algebra_1.Vec3)();
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const tmpBoxVecA = (0, linear_algebra_1.Vec3)();
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@@ -96,4 +96,3 @@ function addOrientedBox(state, axes, radiusScale, detail, radialSegments) {
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const radius = (Math.cbrt(volume) / 300) * radiusScale;
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mesh_builder_1.MeshBuilder.addCage(state, tmpMatrix, cage, radius, detail, radialSegments);
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}
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exports.addOrientedBox = addOrientedBox;
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* @author Gianluca Tomasello <giagitom@gmail.com>
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*/
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Object.defineProperty(exports, "__esModule", { value: true });
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exports.
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exports.addSimpleCylinder = addSimpleCylinder;
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exports.addCylinder = addCylinder;
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exports.addDoubleCylinder = addDoubleCylinder;
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exports.addFixedCountDashedCylinder = addFixedCountDashedCylinder;
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const linear_algebra_1 = require("../../../../mol-math/linear-algebra");
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const mesh_builder_1 = require("../mesh-builder");
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const primitive_1 = require("../../../primitive/primitive");
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@@ -74,14 +77,12 @@ function addSimpleCylinder(state, start, end, props) {
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setCylinderMat(tmpCylinderMat, start, tmpCylinderDir, d, false);
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mesh_builder_1.MeshBuilder.addPrimitive(state, tmpCylinderMat, getCylinder(props));
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}
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exports.addSimpleCylinder = addSimpleCylinder;
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function addCylinder(state, start, end, lengthScale, props) {
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const d = linear_algebra_1.Vec3.distance(start, end) * lengthScale;
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linear_algebra_1.Vec3.sub(tmpCylinderDir, end, start);
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setCylinderMat(tmpCylinderMat, start, tmpCylinderDir, d, true);
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mesh_builder_1.MeshBuilder.addPrimitive(state, tmpCylinderMat, getCylinder(props));
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}
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exports.addCylinder = addCylinder;
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function addDoubleCylinder(state, start, end, lengthScale, shift, props) {
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const d = linear_algebra_1.Vec3.distance(start, end) * lengthScale;
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const cylinder = getCylinder(props);
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@@ -95,7 +96,6 @@ function addDoubleCylinder(state, start, end, lengthScale, shift, props) {
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setCylinderMat(tmpCylinderMat, tmpCylinderStart, tmpCylinderDir, d, true);
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mesh_builder_1.MeshBuilder.addPrimitive(state, tmpCylinderMat, cylinder);
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}
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exports.addDoubleCylinder = addDoubleCylinder;
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function addFixedCountDashedCylinder(state, start, end, lengthScale, segmentCount, stubCap, props) {
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const d = linear_algebra_1.Vec3.distance(start, end) * lengthScale;
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const isOdd = segmentCount % 2 !== 0;
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@@ -118,4 +118,3 @@ function addFixedCountDashedCylinder(state, start, end, lengthScale, segmentCoun
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linear_algebra_1.Vec3.add(tmpCylinderStart, tmpCylinderStart, tmpCylinderDir);
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}
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}
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exports.addFixedCountDashedCylinder = addFixedCountDashedCylinder;
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* @author Alexander Rose <alexander.rose@weirdbyte.de>
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*/
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Object.defineProperty(exports, "__esModule", { value: true });
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exports.addEllipsoid =
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exports.addEllipsoid = addEllipsoid;
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const linear_algebra_1 = require("../../../../mol-math/linear-algebra");
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const sphere_1 = require("./sphere");
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@@ -20,4 +20,3 @@ function setEllipsoidMat(m, center, dirMajor, dirMinor, radiusScale) {
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function addEllipsoid(state, center, dirMajor, dirMinor, radiusScale, detail) {
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mesh_builder_1.MeshBuilder.addPrimitive(state, setEllipsoidMat(tmpEllipsoidMat, center, dirMajor, dirMinor, radiusScale), (0, sphere_1.getSphere)(detail));
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}
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exports.addEllipsoid = addEllipsoid;
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* @author David Sehnal <david.sehnal@gmail.com>
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*/
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Object.defineProperty(exports, "__esModule", { value: true });
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exports.addRibbon =
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exports.addRibbon = addRibbon;
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const linear_algebra_1 = require("../../../../mol-math/linear-algebra");
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const util_1 = require("../../../../mol-data/util");
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// avoiding namespace lookup improved performance in Chrome (Aug 2020)
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@@ -81,4 +81,3 @@ function addRibbon(state, controlPoints, normalVectors, binormalVectors, linearS
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for (let i = 0, il = addedVertexCount; i < il; ++i)
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caAdd(groups, currentGroup);
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}
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exports.addRibbon = addRibbon;
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* @author David Sehnal <david.sehnal@gmail.com>
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*/
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Object.defineProperty(exports, "__esModule", { value: true });
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exports.addSheet =
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exports.addSheet = addSheet;
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const linear_algebra_1 = require("../../../../mol-math/linear-algebra");
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const util_1 = require("../../../../mol-data/util");
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const tA = (0, linear_algebra_1.Vec3)();
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@@ -183,4 +183,3 @@ function addSheet(state, controlPoints, normalVectors, binormalVectors, linearSe
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for (let i = 0, il = addedVertexCount; i < il; ++i)
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caAdd(groups, currentGroup);
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}
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exports.addSheet = addSheet;
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* @author Alexander Rose <alexander.rose@weirdbyte.de>
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*/
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exports.
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//
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@@ -63,6 +63,7 @@ export declare namespace Mesh {
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flipSided: PD.BooleanParam;
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flatShaded: PD.BooleanParam;
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ignoreLight: PD.BooleanParam;
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celShaded: PD.BooleanParam;
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xrayShaded: PD.Select<boolean | "inverted">;
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transparentBackfaces: PD.Select<"on" | "off" | "opaque">;
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bumpFrequency: PD.Numeric;
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@@ -552,6 +552,7 @@ var Mesh;
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flipSided: param_definition_1.ParamDefinition.Boolean(false, base_1.BaseGeometry.ShadingCategory),
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flatShaded: param_definition_1.ParamDefinition.Boolean(false, base_1.BaseGeometry.ShadingCategory),
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ignoreLight: param_definition_1.ParamDefinition.Boolean(false, base_1.BaseGeometry.ShadingCategory),
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celShaded: param_definition_1.ParamDefinition.Boolean(false, base_1.BaseGeometry.ShadingCategory),
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xrayShaded: param_definition_1.ParamDefinition.Select(false, [[false, 'Off'], [true, 'On'], ['inverted', 'Inverted']], base_1.BaseGeometry.ShadingCategory),
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transparentBackfaces: param_definition_1.ParamDefinition.Select('off', param_definition_1.ParamDefinition.arrayToOptions(['off', 'on', 'opaque']), base_1.BaseGeometry.ShadingCategory),
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bumpFrequency: param_definition_1.ParamDefinition.Numeric(0, { min: 0, max: 10, step: 0.1 }, base_1.BaseGeometry.ShadingCategory),
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@@ -628,6 +629,7 @@ var Mesh;
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dFlatShaded: mol_util_1.ValueCell.create(props.flatShaded),
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dFlipSided: mol_util_1.ValueCell.create(props.flipSided),
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dIgnoreLight: mol_util_1.ValueCell.create(props.ignoreLight),
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dCelShaded: mol_util_1.ValueCell.create(props.celShaded),
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dXrayShaded: mol_util_1.ValueCell.create(props.xrayShaded === 'inverted' ? 'inverted' : props.xrayShaded === true ? 'on' : 'off'),
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dTransparentBackfaces: mol_util_1.ValueCell.create(props.transparentBackfaces),
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uBumpFrequency: mol_util_1.ValueCell.create(props.bumpFrequency),
|
|
@@ -646,6 +648,7 @@ var Mesh;
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mol_util_1.ValueCell.updateIfChanged(values.dFlatShaded, props.flatShaded);
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|
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mol_util_1.ValueCell.updateIfChanged(values.dIgnoreLight, props.ignoreLight);
|
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|
+
mol_util_1.ValueCell.updateIfChanged(values.dCelShaded, props.celShaded);
|
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mol_util_1.ValueCell.updateIfChanged(values.dXrayShaded, props.xrayShaded === 'inverted' ? 'inverted' : props.xrayShaded === true ? 'on' : 'off');
|
|
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|
mol_util_1.ValueCell.updateIfChanged(values.dTransparentBackfaces, props.transparentBackfaces);
|
|
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|
mol_util_1.ValueCell.updateIfChanged(values.uBumpFrequency, props.bumpFrequency);
|
|
@@ -5,7 +5,10 @@
|
|
|
5
5
|
* @author Alexander Rose <alexander.rose@weirdbyte.de>
|
|
6
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|
*/
|
|
7
7
|
Object.defineProperty(exports, "__esModule", { value: true });
|
|
8
|
-
exports.
|
|
8
|
+
exports.applyOverpaintColor = applyOverpaintColor;
|
|
9
|
+
exports.clearOverpaint = clearOverpaint;
|
|
10
|
+
exports.createOverpaint = createOverpaint;
|
|
11
|
+
exports.createEmptyOverpaint = createEmptyOverpaint;
|
|
9
12
|
const value_cell_1 = require("../../mol-util/value-cell");
|
|
10
13
|
const linear_algebra_1 = require("../../mol-math/linear-algebra");
|
|
11
14
|
const util_1 = require("../../mol-gl/renderable/util");
|
|
@@ -18,12 +21,10 @@ function applyOverpaintColor(array, start, end, color) {
|
|
|
18
21
|
}
|
|
19
22
|
return true;
|
|
20
23
|
}
|
|
21
|
-
exports.applyOverpaintColor = applyOverpaintColor;
|
|
22
24
|
function clearOverpaint(array, start, end) {
|
|
23
25
|
array.fill(0, start * 4, end * 4);
|
|
24
26
|
return true;
|
|
25
27
|
}
|
|
26
|
-
exports.clearOverpaint = clearOverpaint;
|
|
27
28
|
function createOverpaint(count, type, overpaintData) {
|
|
28
29
|
const overpaint = (0, util_1.createTextureImage)(Math.max(1, count), 4, Uint8Array, overpaintData && overpaintData.tOverpaint.ref.value.array);
|
|
29
30
|
if (overpaintData) {
|
|
@@ -46,7 +47,6 @@ function createOverpaint(count, type, overpaintData) {
|
|
|
46
47
|
};
|
|
47
48
|
}
|
|
48
49
|
}
|
|
49
|
-
exports.createOverpaint = createOverpaint;
|
|
50
50
|
const emptyOverpaintTexture = { array: new Uint8Array(4), width: 1, height: 1 };
|
|
51
51
|
function createEmptyOverpaint(overpaintData) {
|
|
52
52
|
if (overpaintData) {
|
|
@@ -67,4 +67,3 @@ function createEmptyOverpaint(overpaintData) {
|
|
|
67
67
|
};
|
|
68
68
|
}
|
|
69
69
|
}
|
|
70
|
-
exports.createEmptyOverpaint = createEmptyOverpaint;
|
|
@@ -34,7 +34,7 @@ export declare namespace Points {
|
|
|
34
34
|
fuzzy: string;
|
|
35
35
|
};
|
|
36
36
|
type StyleTypes = keyof typeof StyleTypes;
|
|
37
|
-
const StyleTypeNames:
|
|
37
|
+
const StyleTypeNames: StyleTypes[];
|
|
38
38
|
const Params: {
|
|
39
39
|
sizeFactor: PD.Numeric;
|
|
40
40
|
pointSizeAttenuation: PD.BooleanParam;
|
|
@@ -5,7 +5,15 @@
|
|
|
5
5
|
* @author Alexander Rose <alexander.rose@weirdbyte.de>
|
|
6
6
|
*/
|
|
7
7
|
Object.defineProperty(exports, "__esModule", { value: true });
|
|
8
|
-
exports.
|
|
8
|
+
exports.sizeDataFactor = void 0;
|
|
9
|
+
exports.createSizes = createSizes;
|
|
10
|
+
exports.getMaxSize = getMaxSize;
|
|
11
|
+
exports.createValueSize = createValueSize;
|
|
12
|
+
exports.createUniformSize = createUniformSize;
|
|
13
|
+
exports.createTextureSize = createTextureSize;
|
|
14
|
+
exports.createInstanceSize = createInstanceSize;
|
|
15
|
+
exports.createGroupSize = createGroupSize;
|
|
16
|
+
exports.createGroupInstanceSize = createGroupInstanceSize;
|
|
9
17
|
const mol_util_1 = require("../../mol-util");
|
|
10
18
|
const linear_algebra_1 = require("../../mol-math/linear-algebra");
|
|
11
19
|
const util_1 = require("../../mol-gl/renderable/util");
|
|
@@ -20,7 +28,6 @@ function createSizes(locationIt, sizeTheme, sizeData) {
|
|
|
20
28
|
case 'instance': return createInstanceSize(locationIt, sizeTheme.size, sizeData);
|
|
21
29
|
}
|
|
22
30
|
}
|
|
23
|
-
exports.createSizes = createSizes;
|
|
24
31
|
exports.sizeDataFactor = 100; // NOTE same factor is set in shaders
|
|
25
32
|
function getMaxSize(sizeData) {
|
|
26
33
|
const type = sizeData.dSizeType.ref.value;
|
|
@@ -40,7 +47,6 @@ function getMaxSize(sizeData) {
|
|
|
40
47
|
return maxSize / exports.sizeDataFactor;
|
|
41
48
|
}
|
|
42
49
|
}
|
|
43
|
-
exports.getMaxSize = getMaxSize;
|
|
44
50
|
const emptySizeTexture = { array: new Uint8Array(3), width: 1, height: 1 };
|
|
45
51
|
function createEmptySizeTexture() {
|
|
46
52
|
return {
|
|
@@ -62,12 +68,10 @@ function createValueSize(value, sizeData) {
|
|
|
62
68
|
};
|
|
63
69
|
}
|
|
64
70
|
}
|
|
65
|
-
exports.createValueSize = createValueSize;
|
|
66
71
|
/** Creates size uniform */
|
|
67
72
|
function createUniformSize(locationIt, sizeFn, sizeData) {
|
|
68
73
|
return createValueSize(sizeFn(location_1.NullLocation), sizeData);
|
|
69
74
|
}
|
|
70
|
-
exports.createUniformSize = createUniformSize;
|
|
71
75
|
function createTextureSize(sizes, type, sizeData) {
|
|
72
76
|
if (sizeData) {
|
|
73
77
|
mol_util_1.ValueCell.update(sizeData.tSize, sizes);
|
|
@@ -84,7 +88,6 @@ function createTextureSize(sizes, type, sizeData) {
|
|
|
84
88
|
};
|
|
85
89
|
}
|
|
86
90
|
}
|
|
87
|
-
exports.createTextureSize = createTextureSize;
|
|
88
91
|
/** Creates size texture with size for each instance/unit */
|
|
89
92
|
function createInstanceSize(locationIt, sizeFn, sizeData) {
|
|
90
93
|
const { instanceCount } = locationIt;
|
|
@@ -97,7 +100,6 @@ function createInstanceSize(locationIt, sizeFn, sizeData) {
|
|
|
97
100
|
}
|
|
98
101
|
return createTextureSize(sizes, 'instance', sizeData);
|
|
99
102
|
}
|
|
100
|
-
exports.createInstanceSize = createInstanceSize;
|
|
101
103
|
/** Creates size texture with size for each group (i.e. shared across instances/units) */
|
|
102
104
|
function createGroupSize(locationIt, sizeFn, sizeData) {
|
|
103
105
|
const { groupCount } = locationIt;
|
|
@@ -109,7 +111,6 @@ function createGroupSize(locationIt, sizeFn, sizeData) {
|
|
|
109
111
|
}
|
|
110
112
|
return createTextureSize(sizes, 'group', sizeData);
|
|
111
113
|
}
|
|
112
|
-
exports.createGroupSize = createGroupSize;
|
|
113
114
|
/** Creates size texture with size for each group in each instance (i.e. for each unit) */
|
|
114
115
|
function createGroupInstanceSize(locationIt, sizeFn, sizeData) {
|
|
115
116
|
const { groupCount, instanceCount } = locationIt;
|
|
@@ -122,4 +123,3 @@ function createGroupInstanceSize(locationIt, sizeFn, sizeData) {
|
|
|
122
123
|
}
|
|
123
124
|
return createTextureSize(sizes, 'groupInstance', sizeData);
|
|
124
125
|
}
|
|
125
|
-
exports.createGroupInstanceSize = createGroupInstanceSize;
|
|
@@ -50,6 +50,7 @@ export declare namespace Spheres {
|
|
|
50
50
|
sizeFactor: PD.Numeric;
|
|
51
51
|
doubleSided: PD.BooleanParam;
|
|
52
52
|
ignoreLight: PD.BooleanParam;
|
|
53
|
+
celShaded: PD.BooleanParam;
|
|
53
54
|
xrayShaded: PD.Select<boolean | "inverted">;
|
|
54
55
|
transparentBackfaces: PD.Select<"on" | "off" | "opaque">;
|
|
55
56
|
solidInterior: PD.BooleanParam;
|
|
@@ -194,6 +194,7 @@ var Spheres;
|
|
|
194
194
|
sizeFactor: param_definition_1.ParamDefinition.Numeric(1, { min: 0, max: 10, step: 0.1 }),
|
|
195
195
|
doubleSided: param_definition_1.ParamDefinition.Boolean(false, base_1.BaseGeometry.CustomQualityParamInfo),
|
|
196
196
|
ignoreLight: param_definition_1.ParamDefinition.Boolean(false, base_1.BaseGeometry.ShadingCategory),
|
|
197
|
+
celShaded: param_definition_1.ParamDefinition.Boolean(false, base_1.BaseGeometry.ShadingCategory),
|
|
197
198
|
xrayShaded: param_definition_1.ParamDefinition.Select(false, [[false, 'Off'], [true, 'On'], ['inverted', 'Inverted']], base_1.BaseGeometry.ShadingCategory),
|
|
198
199
|
transparentBackfaces: param_definition_1.ParamDefinition.Select('off', param_definition_1.ParamDefinition.arrayToOptions(['off', 'on', 'opaque']), base_1.BaseGeometry.ShadingCategory),
|
|
199
200
|
solidInterior: param_definition_1.ParamDefinition.Boolean(true, base_1.BaseGeometry.ShadingCategory),
|
|
@@ -281,6 +282,7 @@ var Spheres;
|
|
|
281
282
|
uSizeFactor: spheres.shaderData.sizeFactor,
|
|
282
283
|
uDoubleSided: mol_util_1.ValueCell.create(props.doubleSided),
|
|
283
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dIgnoreLight: mol_util_1.ValueCell.create(props.ignoreLight),
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+
dCelShaded: mol_util_1.ValueCell.create(props.celShaded),
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dXrayShaded: mol_util_1.ValueCell.create(props.xrayShaded === 'inverted' ? 'inverted' : props.xrayShaded === true ? 'on' : 'off'),
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dTransparentBackfaces: mol_util_1.ValueCell.create(props.transparentBackfaces),
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dSolidInterior: mol_util_1.ValueCell.create(props.solidInterior),
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@@ -304,6 +306,7 @@ var Spheres;
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mol_util_1.ValueCell.updateIfChanged(values.uSizeFactor, props.sizeFactor);
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mol_util_1.ValueCell.updateIfChanged(values.uDoubleSided, props.doubleSided);
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mol_util_1.ValueCell.updateIfChanged(values.dIgnoreLight, props.ignoreLight);
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+
mol_util_1.ValueCell.updateIfChanged(values.dCelShaded, props.celShaded);
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mol_util_1.ValueCell.updateIfChanged(values.dXrayShaded, props.xrayShaded === 'inverted' ? 'inverted' : props.xrayShaded === true ? 'on' : 'off');
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mol_util_1.ValueCell.updateIfChanged(values.dTransparentBackfaces, props.transparentBackfaces);
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mol_util_1.ValueCell.updateIfChanged(values.dSolidInterior, props.solidInterior);
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@@ -5,7 +5,10 @@
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5
5
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* @author Alexander Rose <alexander.rose@weirdbyte.de>
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6
6
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*/
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7
7
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Object.defineProperty(exports, "__esModule", { value: true });
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8
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-
exports.
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8
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+
exports.applySubstanceMaterial = applySubstanceMaterial;
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9
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+
exports.clearSubstance = clearSubstance;
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10
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+
exports.createSubstance = createSubstance;
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11
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+
exports.createEmptySubstance = createEmptySubstance;
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9
12
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const value_cell_1 = require("../../mol-util/value-cell");
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10
13
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const linear_algebra_1 = require("../../mol-math/linear-algebra");
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11
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const util_1 = require("../../mol-gl/renderable/util");
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@@ -18,12 +21,10 @@ function applySubstanceMaterial(array, start, end, material) {
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}
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return true;
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}
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21
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-
exports.applySubstanceMaterial = applySubstanceMaterial;
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function clearSubstance(array, start, end) {
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array.fill(0, start * 4, end * 4);
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return true;
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}
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26
|
-
exports.clearSubstance = clearSubstance;
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function createSubstance(count, type, substanceData) {
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const substance = (0, util_1.createTextureImage)(Math.max(1, count), 4, Uint8Array, substanceData && substanceData.tSubstance.ref.value.array);
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if (substanceData) {
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@@ -46,7 +47,6 @@ function createSubstance(count, type, substanceData) {
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46
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};
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47
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}
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}
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49
|
-
exports.createSubstance = createSubstance;
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50
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const emptySubstanceTexture = { array: new Uint8Array(4), width: 1, height: 1 };
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51
|
function createEmptySubstance(substanceData) {
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if (substanceData) {
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@@ -67,4 +67,3 @@ function createEmptySubstance(substanceData) {
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67
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};
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}
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}
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70
|
-
exports.createEmptySubstance = createEmptySubstance;
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@@ -6,7 +6,9 @@
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|
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6
6
|
* @author Adam Midlik <midlik@gmail.com>
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|
7
7
|
*/
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|
8
8
|
Object.defineProperty(exports, "__esModule", { value: true });
|
|
9
|
-
exports.
|
|
9
|
+
exports.FontAtlas = exports.FontAtlasParams = void 0;
|
|
10
|
+
exports.getFontAtlas = getFontAtlas;
|
|
11
|
+
exports.setCanvasModule = setCanvasModule;
|
|
10
12
|
const param_definition_1 = require("../../../mol-util/param-definition");
|
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11
13
|
const distance_transform_1 = require("../../../mol-math/geometry/distance-transform");
|
|
12
14
|
const util_1 = require("../../../mol-gl/renderable/util");
|
|
@@ -19,7 +21,6 @@ function getFontAtlas(props) {
|
|
|
19
21
|
}
|
|
20
22
|
return TextAtlasCache[hash];
|
|
21
23
|
}
|
|
22
|
-
exports.getFontAtlas = getFontAtlas;
|
|
23
24
|
exports.FontAtlasParams = {
|
|
24
25
|
fontFamily: param_definition_1.ParamDefinition.Select('sans-serif', [['sans-serif', 'Sans Serif'], ['monospace', 'Monospace'], ['serif', 'Serif'], ['cursive', 'Cursive']]),
|
|
25
26
|
fontQuality: param_definition_1.ParamDefinition.Select(3, [[0, 'lower'], [1, 'low'], [2, 'medium'], [3, 'high'], [4, 'higher']]),
|
|
@@ -127,7 +128,6 @@ function getCanvasModule() {
|
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|
127
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|
function setCanvasModule(canvas) {
|
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128
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|
_canvas = canvas;
|
|
129
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|
}
|
|
130
|
-
exports.setCanvasModule = setCanvasModule;
|
|
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|
/** Return a newly created canvas context (using a canvas HTML element in browser, canvas module in NodeJS) */
|
|
132
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|
function createCanvasContext(width, height, options) {
|
|
133
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|
if (nodejs_shims_1.RUNNING_IN_NODEJS) {
|