molstar 3.4.0 → 3.6.1

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (401) hide show
  1. package/LICENSE +20 -20
  2. package/README.md +202 -197
  3. package/build/viewer/embedded.html +43 -43
  4. package/build/viewer/index.html +106 -106
  5. package/build/viewer/molstar.js +1 -1
  6. package/build/viewer/molstar.js.LICENSE.txt +12 -14
  7. package/lib/apps/docking-viewer/index.html +36 -36
  8. package/lib/apps/docking-viewer/index.js +1 -1
  9. package/lib/apps/viewer/app.js +1 -1
  10. package/lib/apps/viewer/embedded.html +43 -43
  11. package/lib/apps/viewer/index.html +106 -106
  12. package/lib/cli/chem-comp-dict/util.d.ts +20 -20
  13. package/lib/cli/cif2bcif/converter.js +1 -1
  14. package/lib/cli/cif2bcif/index.js +4 -4
  15. package/lib/cli/cifschema/util/cif-dic.d.ts +1 -1
  16. package/lib/cli/cifschema/util/cif-dic.js +7 -5
  17. package/lib/cli/cifschema/util/generate.d.ts +1 -1
  18. package/lib/cli/cifschema/util/generate.js +12 -3
  19. package/lib/cli/cifschema/util/schema.d.ts +3 -3
  20. package/lib/cli/cifschema/util/schema.js +1 -1
  21. package/lib/commonjs/apps/docking-viewer/index.js +2 -2
  22. package/lib/commonjs/apps/viewer/app.js +2 -2
  23. package/lib/commonjs/cli/chem-comp-dict/util.d.ts +20 -20
  24. package/lib/commonjs/cli/cif2bcif/converter.js +1 -1
  25. package/lib/commonjs/cli/cif2bcif/index.js +4 -4
  26. package/lib/commonjs/cli/cifschema/util/cif-dic.d.ts +1 -1
  27. package/lib/commonjs/cli/cifschema/util/cif-dic.js +7 -5
  28. package/lib/commonjs/cli/cifschema/util/generate.d.ts +1 -1
  29. package/lib/commonjs/cli/cifschema/util/generate.js +12 -3
  30. package/lib/commonjs/cli/cifschema/util/schema.d.ts +3 -3
  31. package/lib/commonjs/cli/cifschema/util/schema.js +1 -1
  32. package/lib/commonjs/examples/alpha-orbitals/index.js +2 -2
  33. package/lib/commonjs/examples/basic-wrapper/index.js +2 -2
  34. package/lib/commonjs/examples/lighting/index.js +2 -2
  35. package/lib/commonjs/examples/proteopedia-wrapper/index.js +2 -2
  36. package/lib/commonjs/extensions/anvil/behavior.d.ts +1 -0
  37. package/lib/commonjs/extensions/anvil/representation.d.ts +4 -0
  38. package/lib/commonjs/extensions/cellpack/representation.d.ts +1 -0
  39. package/lib/commonjs/extensions/dnatco/confal-pyramids/color.d.ts +397 -2
  40. package/lib/commonjs/extensions/dnatco/confal-pyramids/color.js +223 -131
  41. package/lib/commonjs/extensions/dnatco/confal-pyramids/property.js +1 -3
  42. package/lib/commonjs/extensions/dnatco/confal-pyramids/representation.d.ts +3 -0
  43. package/lib/commonjs/extensions/dnatco/confal-pyramids/util.js +18 -19
  44. package/lib/commonjs/extensions/rcsb/assembly-symmetry/behavior.d.ts +1 -0
  45. package/lib/commonjs/extensions/rcsb/assembly-symmetry/representation.d.ts +1 -0
  46. package/lib/commonjs/extensions/rcsb/validation-report/representation.d.ts +5 -0
  47. package/lib/commonjs/mol-canvas3d/canvas3d.d.ts +2 -0
  48. package/lib/commonjs/mol-canvas3d/helper/camera-helper.d.ts +1 -0
  49. package/lib/commonjs/mol-canvas3d/helper/handle-helper.d.ts +1 -0
  50. package/lib/commonjs/mol-canvas3d/helper/helper.d.ts +2 -0
  51. package/lib/commonjs/mol-canvas3d/passes/image.d.ts +1 -0
  52. package/lib/commonjs/mol-data/db/column.d.ts +10 -3
  53. package/lib/commonjs/mol-data/db/column.js +39 -17
  54. package/lib/commonjs/mol-geo/geometry/cylinders/cylinders.d.ts +4 -2
  55. package/lib/commonjs/mol-geo/geometry/cylinders/cylinders.js +2 -2
  56. package/lib/commonjs/mol-geo/geometry/lines/lines.d.ts +0 -1
  57. package/lib/commonjs/mol-geo/geometry/mesh/color-smoothing.d.ts +1 -1
  58. package/lib/commonjs/mol-geo/geometry/mesh/color-smoothing.js +5 -3
  59. package/lib/commonjs/mol-geo/geometry/mesh/mesh.d.ts +2 -1
  60. package/lib/commonjs/mol-geo/geometry/mesh/mesh.js +2 -2
  61. package/lib/commonjs/mol-geo/geometry/points/points.d.ts +1 -1
  62. package/lib/commonjs/mol-geo/geometry/spheres/spheres.d.ts +2 -1
  63. package/lib/commonjs/mol-geo/geometry/spheres/spheres.js +2 -2
  64. package/lib/commonjs/mol-geo/geometry/texture-mesh/color-smoothing.d.ts +1 -1
  65. package/lib/commonjs/mol-geo/geometry/texture-mesh/color-smoothing.js +6 -4
  66. package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.d.ts +2 -1
  67. package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.js +2 -2
  68. package/lib/commonjs/mol-gl/shader/chunks/wboit-write.glsl.d.ts +2 -2
  69. package/lib/commonjs/mol-gl/shader/chunks/wboit-write.glsl.js +2 -2
  70. package/lib/commonjs/mol-gl/shader/direct-volume.frag.d.ts +1 -1
  71. package/lib/commonjs/mol-gl/shader/direct-volume.frag.js +1 -1
  72. package/lib/commonjs/mol-gl/shader/image.frag.d.ts +2 -2
  73. package/lib/commonjs/mol-gl/shader/image.frag.js +2 -2
  74. package/lib/commonjs/mol-gl/shader/lines.frag.d.ts +2 -2
  75. package/lib/commonjs/mol-gl/shader/lines.frag.js +2 -2
  76. package/lib/commonjs/mol-gl/shader/points.frag.d.ts +2 -2
  77. package/lib/commonjs/mol-gl/shader/points.frag.js +2 -2
  78. package/lib/commonjs/mol-gl/shader/text.frag.d.ts +2 -2
  79. package/lib/commonjs/mol-gl/shader/text.frag.js +2 -2
  80. package/lib/commonjs/mol-gl/webgl/buffer.d.ts +2 -2
  81. package/lib/commonjs/mol-gl/webgl/buffer.js +12 -12
  82. package/lib/commonjs/mol-gl/webgl/context.d.ts +1 -1
  83. package/lib/commonjs/mol-gl/webgl/context.js +2 -2
  84. package/lib/commonjs/mol-gl/webgl/program.d.ts +1 -1
  85. package/lib/commonjs/mol-gl/webgl/program.js +10 -4
  86. package/lib/commonjs/mol-io/reader/cif/schema/bird.d.ts +8 -8
  87. package/lib/commonjs/mol-io/reader/cif/schema/bird.js +12 -11
  88. package/lib/commonjs/mol-io/reader/cif/schema/ccd-extras.d.ts +1 -1
  89. package/lib/commonjs/mol-io/reader/cif/schema/ccd.d.ts +12 -12
  90. package/lib/commonjs/mol-io/reader/cif/schema/ccd.js +13 -12
  91. package/lib/commonjs/mol-io/reader/cif/schema/mmcif-extras.d.ts +5 -5
  92. package/lib/commonjs/mol-io/reader/cif/schema/mmcif-extras.js +2 -2
  93. package/lib/commonjs/mol-io/reader/cif/schema/mmcif.d.ts +30 -26
  94. package/lib/commonjs/mol-io/reader/cif/schema/mmcif.js +44 -39
  95. package/lib/commonjs/mol-io/reader/cif/schema.d.ts +1 -1
  96. package/lib/commonjs/mol-io/reader/cif/schema.js +22 -2
  97. package/lib/commonjs/mol-io/writer/mol/encoder.js +1 -1
  98. package/lib/commonjs/mol-math/geometry/common.d.ts +2 -1
  99. package/lib/commonjs/mol-math/geometry/common.js +1 -1
  100. package/lib/commonjs/mol-math/geometry/gaussian-density/cpu.d.ts +1 -1
  101. package/lib/commonjs/mol-math/geometry/gaussian-density/cpu.js +2 -2
  102. package/lib/commonjs/mol-math/geometry/gaussian-density/gpu.d.ts +1 -1
  103. package/lib/commonjs/mol-math/geometry/gaussian-density/gpu.js +7 -7
  104. package/lib/commonjs/mol-math/geometry/gaussian-density.d.ts +2 -2
  105. package/lib/commonjs/mol-math/geometry/gaussian-density.js +1 -1
  106. package/lib/commonjs/mol-math/geometry/molecular-surface.d.ts +2 -1
  107. package/lib/commonjs/mol-math/geometry/molecular-surface.js +2 -2
  108. package/lib/commonjs/mol-math/geometry/primitives/box3d.js +2 -1
  109. package/lib/commonjs/mol-math/geometry/primitives/sphere3d.js +12 -6
  110. package/lib/commonjs/mol-model/structure/model/model.js +14 -6
  111. package/lib/commonjs/mol-model/structure/model/properties/common.js +1 -1
  112. package/lib/commonjs/mol-model/structure/model/types.d.ts +19 -17
  113. package/lib/commonjs/mol-model/structure/model/types.js +30 -31
  114. package/lib/commonjs/mol-model/structure/query/queries/generators.js +1 -1
  115. package/lib/commonjs/mol-model/structure/structure/properties.d.ts +1 -1
  116. package/lib/commonjs/mol-model/structure/structure/unit/bonds/inter-compute.js +2 -4
  117. package/lib/commonjs/mol-model/structure/structure/unit/bonds/intra-compute.js +1 -3
  118. package/lib/commonjs/mol-model/structure/structure/unit/rings.js +3 -0
  119. package/lib/commonjs/mol-model-formats/shape/ply.d.ts +2 -0
  120. package/lib/commonjs/mol-model-formats/structure/basic/entities.js +1 -1
  121. package/lib/commonjs/mol-model-formats/structure/basic/schema.d.ts +2 -2
  122. package/lib/commonjs/mol-model-formats/structure/common/component.d.ts +3 -3
  123. package/lib/commonjs/mol-model-formats/structure/common/component.js +46 -46
  124. package/lib/commonjs/mol-model-formats/structure/pdb/atom-site.d.ts +2 -2
  125. package/lib/commonjs/mol-model-formats/structure/pdb/atom-site.js +72 -7
  126. package/lib/commonjs/mol-model-formats/structure/pdb/secondary-structure.js +11 -11
  127. package/lib/commonjs/mol-model-formats/structure/pdb/to-cif.js +7 -2
  128. package/lib/commonjs/mol-model-formats/structure/property/bonds/chem_comp.js +1 -1
  129. package/lib/commonjs/mol-model-formats/structure/property/bonds/struct_conn.js +1 -1
  130. package/lib/commonjs/mol-model-props/computed/representations/interactions-inter-unit-cylinder.d.ts +1 -0
  131. package/lib/commonjs/mol-model-props/computed/representations/interactions-intra-unit-cylinder.d.ts +1 -0
  132. package/lib/commonjs/mol-model-props/computed/representations/interactions.d.ts +3 -0
  133. package/lib/commonjs/mol-model-props/integrative/cross-link-restraint/representation.d.ts +4 -0
  134. package/lib/commonjs/mol-plugin/behavior/dynamic/volume-streaming/model.d.ts +2 -3
  135. package/lib/commonjs/mol-plugin/behavior/dynamic/volume-streaming/util.js +4 -2
  136. package/lib/commonjs/mol-plugin/commands.d.ts +1 -0
  137. package/lib/commonjs/mol-plugin/util/viewport-screenshot.d.ts +3 -0
  138. package/lib/commonjs/mol-plugin-state/actions/structure.d.ts +6 -6
  139. package/lib/commonjs/mol-plugin-state/helpers/structure-selection-query.d.ts +1 -1
  140. package/lib/commonjs/mol-plugin-state/helpers/structure-selection-query.js +1 -1
  141. package/lib/commonjs/mol-plugin-state/transforms/representation.d.ts +6 -0
  142. package/lib/commonjs/mol-plugin-ui/react18.d.ts +11 -0
  143. package/lib/commonjs/mol-plugin-ui/react18.js +38 -0
  144. package/lib/commonjs/mol-plugin-ui/state/common.js +6 -7
  145. package/lib/commonjs/mol-plugin-ui/structure/focus.d.ts +1 -1
  146. package/lib/commonjs/mol-plugin-ui/structure/focus.js +2 -2
  147. package/lib/commonjs/mol-plugin-ui/task.d.ts +2 -21
  148. package/lib/commonjs/mol-plugin-ui/task.js +39 -43
  149. package/lib/commonjs/mol-repr/shape/loci/angle.d.ts +1 -0
  150. package/lib/commonjs/mol-repr/shape/loci/dihedral.d.ts +1 -0
  151. package/lib/commonjs/mol-repr/shape/loci/orientation.d.ts +1 -0
  152. package/lib/commonjs/mol-repr/shape/loci/plane.d.ts +1 -0
  153. package/lib/commonjs/mol-repr/shape/model/unitcell.d.ts +1 -0
  154. package/lib/commonjs/mol-repr/structure/complex-visual.d.ts +3 -0
  155. package/lib/commonjs/mol-repr/structure/params.d.ts +4 -0
  156. package/lib/commonjs/mol-repr/structure/registry.d.ts +10 -0
  157. package/lib/commonjs/mol-repr/structure/representation/backbone.d.ts +3 -0
  158. package/lib/commonjs/mol-repr/structure/representation/ball-and-stick.d.ts +3 -0
  159. package/lib/commonjs/mol-repr/structure/representation/carbohydrate.d.ts +3 -0
  160. package/lib/commonjs/mol-repr/structure/representation/cartoon.d.ts +3 -0
  161. package/lib/commonjs/mol-repr/structure/representation/ellipsoid.d.ts +3 -0
  162. package/lib/commonjs/mol-repr/structure/representation/gaussian-surface.d.ts +3 -0
  163. package/lib/commonjs/mol-repr/structure/representation/molecular-surface.d.ts +3 -0
  164. package/lib/commonjs/mol-repr/structure/representation/orientation.d.ts +3 -0
  165. package/lib/commonjs/mol-repr/structure/representation/putty.d.ts +3 -0
  166. package/lib/commonjs/mol-repr/structure/representation/spacefill.d.ts +3 -0
  167. package/lib/commonjs/mol-repr/structure/units-visual.d.ts +4 -0
  168. package/lib/commonjs/mol-repr/structure/visual/bond-inter-unit-cylinder.d.ts +2 -0
  169. package/lib/commonjs/mol-repr/structure/visual/bond-intra-unit-cylinder.d.ts +2 -0
  170. package/lib/commonjs/mol-repr/structure/visual/carbohydrate-link-cylinder.d.ts +1 -0
  171. package/lib/commonjs/mol-repr/structure/visual/carbohydrate-symbol-mesh.d.ts +1 -0
  172. package/lib/commonjs/mol-repr/structure/visual/carbohydrate-terminal-link-cylinder.d.ts +1 -0
  173. package/lib/commonjs/mol-repr/structure/visual/element-sphere.d.ts +2 -0
  174. package/lib/commonjs/mol-repr/structure/visual/ellipsoid-mesh.d.ts +1 -0
  175. package/lib/commonjs/mol-repr/structure/visual/gaussian-density-volume.js +2 -3
  176. package/lib/commonjs/mol-repr/structure/visual/gaussian-surface-mesh.d.ts +5 -1
  177. package/lib/commonjs/mol-repr/structure/visual/gaussian-surface-mesh.js +9 -9
  178. package/lib/commonjs/mol-repr/structure/visual/gaussian-surface-wireframe.d.ts +1 -1
  179. package/lib/commonjs/mol-repr/structure/visual/gaussian-surface-wireframe.js +4 -5
  180. package/lib/commonjs/mol-repr/structure/visual/molecular-surface-mesh.d.ts +1 -0
  181. package/lib/commonjs/mol-repr/structure/visual/molecular-surface-mesh.js +3 -3
  182. package/lib/commonjs/mol-repr/structure/visual/molecular-surface-wireframe.d.ts +1 -1
  183. package/lib/commonjs/mol-repr/structure/visual/molecular-surface-wireframe.js +4 -4
  184. package/lib/commonjs/mol-repr/structure/visual/nucleotide-block-mesh.d.ts +1 -0
  185. package/lib/commonjs/mol-repr/structure/visual/nucleotide-ring-mesh.d.ts +1 -0
  186. package/lib/commonjs/mol-repr/structure/visual/orientation-ellipsoid-mesh.d.ts +1 -0
  187. package/lib/commonjs/mol-repr/structure/visual/polymer-backbone-cylinder.d.ts +2 -0
  188. package/lib/commonjs/mol-repr/structure/visual/polymer-backbone-sphere.d.ts +2 -0
  189. package/lib/commonjs/mol-repr/structure/visual/polymer-direction-wedge.d.ts +1 -0
  190. package/lib/commonjs/mol-repr/structure/visual/polymer-gap-cylinder.d.ts +1 -0
  191. package/lib/commonjs/mol-repr/structure/visual/polymer-trace-mesh.d.ts +1 -0
  192. package/lib/commonjs/mol-repr/structure/visual/polymer-tube-mesh.d.ts +1 -0
  193. package/lib/commonjs/mol-repr/structure/visual/util/common.d.ts +1 -3
  194. package/lib/commonjs/mol-repr/structure/visual/util/common.js +2 -27
  195. package/lib/commonjs/mol-repr/util.d.ts +2 -1
  196. package/lib/commonjs/mol-repr/util.js +2 -2
  197. package/lib/commonjs/mol-repr/volume/isosurface.d.ts +5 -0
  198. package/lib/commonjs/mol-repr/volume/registry.d.ts +1 -0
  199. package/lib/commonjs/mol-script/language/builder.d.ts +1 -0
  200. package/lib/examples/alpha-orbitals/index.html +61 -61
  201. package/lib/examples/alpha-orbitals/index.js +1 -1
  202. package/lib/examples/basic-wrapper/index.html +137 -137
  203. package/lib/examples/basic-wrapper/index.js +1 -1
  204. package/lib/examples/lighting/index.html +88 -88
  205. package/lib/examples/lighting/index.js +1 -1
  206. package/lib/examples/proteopedia-wrapper/index.html +236 -236
  207. package/lib/examples/proteopedia-wrapper/index.js +1 -1
  208. package/lib/extensions/anvil/behavior.d.ts +1 -0
  209. package/lib/extensions/anvil/representation.d.ts +4 -0
  210. package/lib/extensions/cellpack/representation.d.ts +1 -0
  211. package/lib/extensions/dnatco/confal-pyramids/color.d.ts +397 -2
  212. package/lib/extensions/dnatco/confal-pyramids/color.js +224 -132
  213. package/lib/extensions/dnatco/confal-pyramids/property.js +1 -3
  214. package/lib/extensions/dnatco/confal-pyramids/representation.d.ts +3 -0
  215. package/lib/extensions/dnatco/confal-pyramids/util.js +19 -20
  216. package/lib/extensions/rcsb/assembly-symmetry/behavior.d.ts +1 -0
  217. package/lib/extensions/rcsb/assembly-symmetry/representation.d.ts +1 -0
  218. package/lib/extensions/rcsb/validation-report/representation.d.ts +5 -0
  219. package/lib/mol-canvas3d/canvas3d.d.ts +2 -0
  220. package/lib/mol-canvas3d/helper/camera-helper.d.ts +1 -0
  221. package/lib/mol-canvas3d/helper/handle-helper.d.ts +1 -0
  222. package/lib/mol-canvas3d/helper/helper.d.ts +2 -0
  223. package/lib/mol-canvas3d/passes/image.d.ts +1 -0
  224. package/lib/mol-data/db/column.d.ts +10 -3
  225. package/lib/mol-data/db/column.js +39 -18
  226. package/lib/mol-geo/geometry/cylinders/cylinders.d.ts +4 -2
  227. package/lib/mol-geo/geometry/cylinders/cylinders.js +2 -2
  228. package/lib/mol-geo/geometry/lines/lines.d.ts +0 -1
  229. package/lib/mol-geo/geometry/mesh/color-smoothing.d.ts +1 -1
  230. package/lib/mol-geo/geometry/mesh/color-smoothing.js +5 -3
  231. package/lib/mol-geo/geometry/mesh/mesh.d.ts +2 -1
  232. package/lib/mol-geo/geometry/mesh/mesh.js +2 -2
  233. package/lib/mol-geo/geometry/points/points.d.ts +1 -1
  234. package/lib/mol-geo/geometry/spheres/spheres.d.ts +2 -1
  235. package/lib/mol-geo/geometry/spheres/spheres.js +2 -2
  236. package/lib/mol-geo/geometry/texture-mesh/color-smoothing.d.ts +1 -1
  237. package/lib/mol-geo/geometry/texture-mesh/color-smoothing.js +6 -4
  238. package/lib/mol-geo/geometry/texture-mesh/texture-mesh.d.ts +2 -1
  239. package/lib/mol-geo/geometry/texture-mesh/texture-mesh.js +2 -2
  240. package/lib/mol-gl/shader/chunks/wboit-write.glsl.d.ts +2 -2
  241. package/lib/mol-gl/shader/chunks/wboit-write.glsl.js +2 -2
  242. package/lib/mol-gl/shader/direct-volume.frag.d.ts +1 -1
  243. package/lib/mol-gl/shader/direct-volume.frag.js +1 -1
  244. package/lib/mol-gl/shader/image.frag.d.ts +2 -2
  245. package/lib/mol-gl/shader/image.frag.js +2 -2
  246. package/lib/mol-gl/shader/lines.frag.d.ts +2 -2
  247. package/lib/mol-gl/shader/lines.frag.js +2 -2
  248. package/lib/mol-gl/shader/points.frag.d.ts +2 -2
  249. package/lib/mol-gl/shader/points.frag.js +2 -2
  250. package/lib/mol-gl/shader/text.frag.d.ts +2 -2
  251. package/lib/mol-gl/shader/text.frag.js +2 -2
  252. package/lib/mol-gl/webgl/buffer.d.ts +2 -2
  253. package/lib/mol-gl/webgl/buffer.js +12 -12
  254. package/lib/mol-gl/webgl/context.d.ts +1 -1
  255. package/lib/mol-gl/webgl/context.js +2 -2
  256. package/lib/mol-gl/webgl/program.d.ts +1 -1
  257. package/lib/mol-gl/webgl/program.js +10 -4
  258. package/lib/mol-io/reader/cif/schema/bird.d.ts +8 -8
  259. package/lib/mol-io/reader/cif/schema/bird.js +12 -11
  260. package/lib/mol-io/reader/cif/schema/ccd-extras.d.ts +1 -1
  261. package/lib/mol-io/reader/cif/schema/ccd.d.ts +12 -12
  262. package/lib/mol-io/reader/cif/schema/ccd.js +13 -12
  263. package/lib/mol-io/reader/cif/schema/mmcif-extras.d.ts +5 -5
  264. package/lib/mol-io/reader/cif/schema/mmcif-extras.js +2 -2
  265. package/lib/mol-io/reader/cif/schema/mmcif.d.ts +30 -26
  266. package/lib/mol-io/reader/cif/schema/mmcif.js +44 -39
  267. package/lib/mol-io/reader/cif/schema.d.ts +1 -1
  268. package/lib/mol-io/reader/cif/schema.js +22 -2
  269. package/lib/mol-io/writer/mol/encoder.js +1 -1
  270. package/lib/mol-math/geometry/common.d.ts +2 -1
  271. package/lib/mol-math/geometry/common.js +1 -1
  272. package/lib/mol-math/geometry/gaussian-density/cpu.d.ts +1 -1
  273. package/lib/mol-math/geometry/gaussian-density/cpu.js +2 -2
  274. package/lib/mol-math/geometry/gaussian-density/gpu.d.ts +1 -1
  275. package/lib/mol-math/geometry/gaussian-density/gpu.js +7 -7
  276. package/lib/mol-math/geometry/gaussian-density.d.ts +2 -2
  277. package/lib/mol-math/geometry/gaussian-density.js +1 -1
  278. package/lib/mol-math/geometry/molecular-surface.d.ts +2 -1
  279. package/lib/mol-math/geometry/molecular-surface.js +2 -2
  280. package/lib/mol-math/geometry/primitives/box3d.js +2 -1
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  401. package/package.json +162 -160
@@ -0,0 +1,11 @@
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+ /**
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+ * Copyright (c) 2018-2022 mol* contributors, licensed under MIT, See LICENSE file for more info.
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+ *
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+ * @author David Sehnal <david.sehnal@gmail.com>
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+ * @author Alexander Rose <alexander.rose@weirdbyte.de>
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+ */
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+ import { PluginUIContext } from './context';
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+ import { PluginUISpec } from './spec';
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+ export declare function createPluginUI(target: HTMLElement, spec?: PluginUISpec, options?: {
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+ onBeforeUIRender?: (ctx: PluginUIContext) => (Promise<void> | void);
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+ }): Promise<PluginUIContext>;
@@ -0,0 +1,34 @@
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+ /**
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+ * Copyright (c) 2018-2022 mol* contributors, licensed under MIT, See LICENSE file for more info.
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+ *
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+ * @author David Sehnal <david.sehnal@gmail.com>
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+ * @author Alexander Rose <alexander.rose@weirdbyte.de>
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+ */
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+ import { __awaiter, __generator } from "tslib";
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+ import { createElement } from 'react';
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+ import { createRoot } from 'react-dom/client';
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+ import { Plugin } from './plugin';
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+ import { PluginUIContext } from './context';
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+ import { DefaultPluginUISpec } from './spec';
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+ export function createPluginUI(target, spec, options) {
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+ return __awaiter(this, void 0, void 0, function () {
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+ var ctx;
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+ return __generator(this, function (_a) {
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+ switch (_a.label) {
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+ case 0:
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+ ctx = new PluginUIContext(spec || DefaultPluginUISpec());
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+ return [4 /*yield*/, ctx.init()];
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+ case 1:
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+ _a.sent();
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+ if (!(options === null || options === void 0 ? void 0 : options.onBeforeUIRender)) return [3 /*break*/, 3];
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+ return [4 /*yield*/, options.onBeforeUIRender(ctx)];
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+ case 2:
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+ _a.sent();
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+ _a.label = 3;
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+ case 3:
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+ createRoot(target).render(createElement(Plugin, { plugin: ctx }));
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+ return [2 /*return*/, ctx];
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+ }
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+ });
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+ });
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+ }
@@ -1,33 +1,33 @@
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- 
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- @mixin user-select($select) {
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- -webkit-user-select: $select;
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- -moz-user-select: $select;
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- -ms-user-select: $select; // IE10+
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- user-select: $select;
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- }
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-
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- .msp-plugin {
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- font-family: "Helvetica Neue", "Segoe UI", Helvetica, "Source Sans Pro", Arial, sans-serif;
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- font-size: 14px;
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- line-height: 1.42857143;
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-
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- position: absolute;
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- left: 0;
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- top: 0;
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- right: 0;
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- bottom: 0;
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-
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- @import 'variables';
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-
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- @import "normalize";
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-
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- @import 'layout';
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- @import 'ui';
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- @import 'logo';
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-
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- .msp-plugin-content {
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- color: $font-color;
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- }
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-
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- background: $default-background;
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+ 
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+ @mixin user-select($select) {
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+ -webkit-user-select: $select;
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+ -moz-user-select: $select;
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+ -ms-user-select: $select; // IE10+
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+ user-select: $select;
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+ }
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+
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+ .msp-plugin {
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+ font-family: "Helvetica Neue", "Segoe UI", Helvetica, "Source Sans Pro", Arial, sans-serif;
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+ font-size: 14px;
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+ line-height: 1.42857143;
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+
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+ position: absolute;
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+ left: 0;
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+ top: 0;
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+ right: 0;
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+ bottom: 0;
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+
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+ @import 'variables';
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+
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+ @import "normalize";
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+
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+ @import 'layout';
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+ @import 'ui';
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+ @import 'logo';
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+
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+ .msp-plugin-content {
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+ color: $font-color;
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+ }
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+
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+ background: $default-background;
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  }