npm - molstar - Versions diffs - 3.0.2 → 3.3.0 - Mend

molstar 3.0.2 → 3.3.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Files changed (2351) hide show

package/lib/mol-plugin/behavior/dynamic/custom-props/structure-info.js CHANGED Viewed

@@ -127,4 +127,3 @@ export var StructureInfo = PluginBehavior.create({
         return class_1;
     }(PluginBehavior.Handler))
 });
-//# sourceMappingURL=structure-info.js.map

package/lib/mol-plugin/behavior/dynamic/custom-props.d.ts CHANGED Viewed

@@ -9,5 +9,5 @@ export { AccessibleSurfaceArea } from './custom-props/computed/accessible-surfac
 export { Interactions } from './custom-props/computed/interactions';
 export { SecondaryStructure } from './custom-props/computed/secondary-structure';
 export { ValenceModel } from './custom-props/computed/valence-model';
-export { BestDatabaseSequenceMapping } from './custom-props/sequence/best-database-mapping';
+export { SIFTSMapping as BestDatabaseSequenceMapping } from './custom-props/sequence/sifts-mapping';
 export { CrossLinkRestraint } from './custom-props/integrative/cross-link-restraint';

package/lib/mol-plugin/behavior/dynamic/custom-props.js CHANGED Viewed

@@ -9,6 +9,5 @@ export { AccessibleSurfaceArea } from './custom-props/computed/accessible-surfac
 export { Interactions } from './custom-props/computed/interactions';
 export { SecondaryStructure } from './custom-props/computed/secondary-structure';
 export { ValenceModel } from './custom-props/computed/valence-model';
-export { BestDatabaseSequenceMapping } from './custom-props/sequence/best-database-mapping';
+export { SIFTSMapping as BestDatabaseSequenceMapping } from './custom-props/sequence/sifts-mapping';
 export { CrossLinkRestraint } from './custom-props/integrative/cross-link-restraint';
-//# sourceMappingURL=custom-props.js.map

package/lib/mol-plugin/behavior/dynamic/representation.js CHANGED Viewed

@@ -38,10 +38,10 @@ export var HighlightLoci = PluginBehavior.create({
         __extends(class_1, _super);
         function class_1() {
             var _this = _super !== null && _super.apply(this, arguments) || this;
-            _this.lociMarkProvider = function (interactionLoci, action, noRender) {
+            _this.lociMarkProvider = function (interactionLoci, action) {
                 if (!_this.ctx.canvas3d || !_this.params.mark)
                     return;
-                _this.ctx.canvas3d.mark(interactionLoci, action, noRender);
+                _this.ctx.canvas3d.mark(interactionLoci, action);
             };
             return _this;
         }
@@ -108,10 +108,10 @@ export var SelectLoci = PluginBehavior.create({
         __extends(class_2, _super);
         function class_2(ctx, params) {
             var _this = _super.call(this, ctx, params) || this;
-            _this.lociMarkProvider = function (reprLoci, action, noRender) {
+            _this.lociMarkProvider = function (reprLoci, action) {
                 if (!_this.ctx.canvas3d || !_this.params.mark)
                     return;
-                _this.ctx.canvas3d.mark({ loci: reprLoci.loci }, action, noRender);
+                _this.ctx.canvas3d.mark({ loci: reprLoci.loci }, action);
             };
             _this.spine = new StateTreeSpine.Impl(ctx.state.data.cells);
             return _this;
@@ -303,4 +303,3 @@ export var FocusLoci = PluginBehavior.create({
     params: function () { return FocusLociParams; },
     display: { name: 'Representation Focus Loci on Canvas' }
 });
-//# sourceMappingURL=representation.js.map

package/lib/mol-plugin/behavior/dynamic/selection/structure-focus-representation.d.ts CHANGED Viewed

@@ -1,5 +1,5 @@
 /**
- * Copyright (c) 2019-2021 mol* contributors, licensed under MIT, See LICENSE file for more info.
+ * Copyright (c) 2019-2022 mol* contributors, licensed under MIT, See LICENSE file for more info.
  *
  * @author David Sehnal <david.sehnal@gmail.com>
  * @author Alexander Rose <alexander.rose@weirdbyte.de>
@@ -22,6 +22,7 @@ declare const StructureFocusRepresentationParams: (plugin: PluginContext) => {
     components: PD.MultiSelect<"target" | "surroundings" | "interactions">;
     excludeTargetFromSurroundings: PD.BooleanParam;
     ignoreHydrogens: PD.BooleanParam;
+    ignoreLight: PD.BooleanParam;
     material: PD.Group<PD.Normalize<{
         metalness: number;
         roughness: number;

package/lib/mol-plugin/behavior/dynamic/selection/structure-focus-representation.js CHANGED Viewed

@@ -1,5 +1,5 @@
 /**
- * Copyright (c) 2019-2021 mol* contributors, licensed under MIT, See LICENSE file for more info.
+ * Copyright (c) 2019-2022 mol* contributors, licensed under MIT, See LICENSE file for more info.
  *
  * @author David Sehnal <david.sehnal@gmail.com>
  * @author Alexander Rose <alexander.rose@weirdbyte.de>
@@ -24,11 +24,19 @@ var StructureFocusRepresentationParams = function (plugin) {
         expandRadius: PD.Numeric(5, { min: 1, max: 10, step: 1 }),
         targetParams: PD.Group(reprParams, {
             label: 'Target',
-            customDefault: createStructureRepresentationParams(plugin, void 0, { type: 'ball-and-stick', size: 'physical', typeParams: { sizeFactor: 0.26, alpha: 0.51, adjustCylinderLength: true } })
+            customDefault: createStructureRepresentationParams(plugin, void 0, {
+                type: 'ball-and-stick',
+                size: 'physical',
+                typeParams: { sizeFactor: 0.22, sizeAspectRatio: 0.73, adjustCylinderLength: true, xrayShaded: true, aromaticBonds: false, multipleBonds: 'off', excludeTypes: ['hydrogen-bond', 'metal-coordination'] },
+            })
         }),
         surroundingsParams: PD.Group(reprParams, {
             label: 'Surroundings',
-            customDefault: createStructureRepresentationParams(plugin, void 0, { type: 'ball-and-stick', size: 'physical', typeParams: { sizeFactor: 0.16 } })
+            customDefault: createStructureRepresentationParams(plugin, void 0, {
+                type: 'ball-and-stick',
+                size: 'physical',
+                typeParams: { sizeFactor: 0.16, excludeTypes: ['hydrogen-bond', 'metal-coordination'] }
+            })
         }),
         nciParams: PD.Group(reprParams, {
             label: 'Non-covalent Int.',
@@ -41,6 +49,7 @@ var StructureFocusRepresentationParams = function (plugin) {
         components: PD.MultiSelect(FocusComponents, PD.arrayToOptions(FocusComponents)),
         excludeTargetFromSurroundings: PD.Boolean(false, { label: 'Exclude Target', description: 'Exclude the focus "target" from the surroudings component.' }),
         ignoreHydrogens: PD.Boolean(false),
+        ignoreLight: PD.Boolean(false),
         material: Material.getParam(),
         clip: PD.Group(Clip.Params),
     };
@@ -68,9 +77,9 @@ var StructureFocusRepresentationBehavior = /** @class */ (function (_super) {
         configurable: true
     });
     StructureFocusRepresentationBehavior.prototype.getReprParams = function (reprParams) {
-        return __assign(__assign({}, this.params.targetParams), { type: {
+        return __assign(__assign({}, reprParams), { type: {
                 name: reprParams.type.name,
-                params: __assign(__assign({}, reprParams.type.params), { ignoreHydrogens: this.params.ignoreHydrogens, material: this.params.material, clip: this.params.clip })
+                params: __assign(__assign({}, reprParams.type.params), { ignoreHydrogens: this.params.ignoreHydrogens, ignoreLight: this.params.ignoreLight, material: this.params.material, clip: this.params.clip })
             } });
     };
     StructureFocusRepresentationBehavior.prototype.ensureShape = function (cell) {
@@ -104,7 +113,7 @@ var StructureFocusRepresentationBehavior = /** @class */ (function (_super) {
         if (components.indexOf('interactions') >= 0 && !refs[StructureFocusRepresentationTags.SurrNciRepr] && cell.obj && InteractionsRepresentationProvider.isApplicable((_a = cell.obj) === null || _a === void 0 ? void 0 : _a.data)) {
             refs[StructureFocusRepresentationTags.SurrNciRepr] = builder
                 .to(refs[StructureFocusRepresentationTags.SurrSel])
-                .apply(StateTransforms.Representation.StructureRepresentation3D, this.params.nciParams, { tags: StructureFocusRepresentationTags.SurrNciRepr }).ref;
+                .apply(StateTransforms.Representation.StructureRepresentation3D, this.getReprParams(this.params.nciParams), { tags: StructureFocusRepresentationTags.SurrNciRepr }).ref;
         }
         return { state: state, builder: builder, refs: refs };
     };
@@ -214,7 +223,7 @@ var StructureFocusRepresentationBehavior = /** @class */ (function (_super) {
                             if (!hasComponent)
                                 builder.delete(repr.transform.ref);
                             else
-                                builder.to(repr).update(this.params.nciParams);
+                                builder.to(repr).update(this.getReprParams(this.params.nciParams));
                         }
                         return [4 /*yield*/, PluginCommands.State.Update(this.plugin, { state: state, tree: builder, options: { doNotLogTiming: true, doNotUpdateCurrent: true } })];
                     case 1:
@@ -239,4 +248,3 @@ export var StructureFocusRepresentation = PluginBehavior.create({
     ctor: StructureFocusRepresentationBehavior,
     params: function (_, plugin) { return StructureFocusRepresentationParams(plugin); }
 });
-//# sourceMappingURL=structure-focus-representation.js.map

package/lib/mol-plugin/behavior/dynamic/volume-streaming/behavior.js CHANGED Viewed

@@ -429,4 +429,3 @@ export { VolumeStreaming };
     }(PluginBehavior.WithSubscribers));
     VolumeStreaming.Behavior = Behavior;
 })(VolumeStreaming || (VolumeStreaming = {}));
-//# sourceMappingURL=behavior.js.map

package/lib/mol-plugin/behavior/dynamic/volume-streaming/model.js CHANGED Viewed

@@ -22,4 +22,3 @@ export var VolumeServerHeader;
         ValueType.Int8 = 'int8';
     })(ValueType = VolumeServerHeader.ValueType || (VolumeServerHeader.ValueType = {}));
 })(VolumeServerHeader || (VolumeServerHeader = {}));
-//# sourceMappingURL=model.js.map

package/lib/mol-plugin/behavior/dynamic/volume-streaming/transformers.js CHANGED Viewed

@@ -381,4 +381,3 @@ function createVolumeProps(streaming, channelName) {
     var channel = streaming.channels[channelName];
     return VolumeRepresentation3DHelpers.getDefaultParamsStatic(streaming.plugin, 'isosurface', { isoValue: channel.isoValue, alpha: channel.opacity, visuals: channel.wireframe ? ['wireframe'] : ['solid'] }, 'uniform', { value: channel.color });
 }
-//# sourceMappingURL=transformers.js.map

package/lib/mol-plugin/behavior/dynamic/volume-streaming/util.js CHANGED Viewed

@@ -68,7 +68,7 @@ export function getContourLevel(provider, plugin, taskCtx, emdbId) {
 }
 export function getContourLevelEmdb(plugin, taskCtx, emdbId) {
     return __awaiter(this, void 0, void 0, function () {
-        var emdbHeaderServer, header, map, contourLevel;
+        var emdbHeaderServer, header, contours, primaryContour, i, contourLevel;
         return __generator(this, function (_a) {
             switch (_a.label) {
                 case 0:
@@ -76,8 +76,15 @@ export function getContourLevelEmdb(plugin, taskCtx, emdbId) {
                     return [4 /*yield*/, plugin.fetch({ url: "".concat(emdbHeaderServer, "/").concat(emdbId.toUpperCase(), "/header/").concat(emdbId.toLowerCase(), ".xml"), type: 'xml' }).runInContext(taskCtx)];
                 case 1:
                     header = _a.sent();
-                    map = header.getElementsByTagName('map')[0];
-                    contourLevel = parseFloat(map.getElementsByTagName('contourLevel')[0].textContent);
+                    contours = header.getElementsByTagName('contour');
+                    primaryContour = contours[0];
+                    for (i = 1; i < contours.length; i++) {
+                        if (contours[i].getAttribute('primary') === 'true') {
+                            primaryContour = contours[i];
+                            break;
+                        }
+                    }
+                    contourLevel = parseFloat(primaryContour.getElementsByTagName('level')[0].textContent);
                     return [2 /*return*/, contourLevel];
             }
         });
@@ -153,4 +160,3 @@ export function getEmdbIds(plugin, taskCtx, pdbId) {
         });
     });
 }
-//# sourceMappingURL=util.js.map

package/lib/mol-plugin/behavior/static/camera.js CHANGED Viewed

@@ -27,4 +27,3 @@ export function Focus(ctx) {
         ctx.events.canvas3d.settingsUpdated.next(void 0);
     });
 }
-//# sourceMappingURL=camera.js.map

package/lib/mol-plugin/behavior/static/misc.js CHANGED Viewed

@@ -23,4 +23,3 @@ export function Canvas3DSetSettings(ctx) {
         ctx.events.canvas3d.settingsUpdated.next(void 0);
     });
 }
-//# sourceMappingURL=misc.js.map

package/lib/mol-plugin/behavior/static/representation.js CHANGED Viewed

@@ -90,4 +90,3 @@ function updateVisibility(cell, r) {
         return false;
     }
 }
-//# sourceMappingURL=representation.js.map

package/lib/mol-plugin/behavior/static/state.js CHANGED Viewed

@@ -241,4 +241,3 @@ export function Snapshots(ctx) {
         });
     });
 }
-//# sourceMappingURL=state.js.map

package/lib/mol-plugin/behavior.js CHANGED Viewed

@@ -22,4 +22,3 @@ export var PluginBehaviors = {
     Camera: DynamicCamera,
     CustomProps: DynamicCustomProps
 };
-//# sourceMappingURL=behavior.js.map

package/lib/mol-plugin/command.js CHANGED Viewed

@@ -99,4 +99,3 @@ var PluginCommandManager = /** @class */ (function () {
     };
     return PluginCommandManager;
 }());
-//# sourceMappingURL=command.js.map

package/lib/mol-plugin/commands.d.ts CHANGED Viewed

@@ -228,6 +228,7 @@ export declare const PluginCommands: {
                         radius: any;
                         bias: any;
                         blurKernelSize: any;
+                        resolutionScale: any;
                     }>, "on">;
                     outline: import("../mol-util/param-definition").ParamDefinition.NamedParams<import("../mol-util/param-definition").ParamDefinition.Normalize<unknown>, "off"> | import("../mol-util/param-definition").ParamDefinition.NamedParams<import("../mol-util/param-definition").ParamDefinition.Normalize<{
                         scale: any;

package/lib/mol-plugin/commands.js CHANGED Viewed

@@ -54,4 +54,3 @@ export var PluginCommands = {
         ResetSettings: PluginCommand()
     }
 };
-//# sourceMappingURL=commands.js.map

package/lib/mol-plugin/config.js CHANGED Viewed

@@ -86,4 +86,3 @@ var PluginConfigManager = /** @class */ (function () {
     return PluginConfigManager;
 }());
 export { PluginConfigManager };
-//# sourceMappingURL=config.js.map

package/lib/mol-plugin/context.js CHANGED Viewed

@@ -435,4 +435,3 @@ var PluginContext = /** @class */ (function () {
     return PluginContext;
 }());
 export { PluginContext };
-//# sourceMappingURL=context.js.map

package/lib/mol-plugin/features.js CHANGED Viewed

@@ -32,4 +32,3 @@ export var PluginFeatureDetection = {
         return !/Version\/15.\d Safari/.test(navigator.userAgent);
     }
 };
-//# sourceMappingURL=features.js.map

package/lib/mol-plugin/layout.js CHANGED Viewed

@@ -173,4 +173,3 @@ var PluginLayout = /** @class */ (function (_super) {
     return PluginLayout;
 }(StatefulPluginComponent));
 export { PluginLayout };
-//# sourceMappingURL=layout.js.map

package/lib/mol-plugin/spec.js CHANGED Viewed

@@ -103,4 +103,3 @@ export var DefaultPluginSpec = function () { return ({
         AnimateStateInterpolation
     ]
 }); };
-//# sourceMappingURL=spec.js.map

package/lib/mol-plugin/state.js CHANGED Viewed

@@ -177,4 +177,3 @@ var PluginState = /** @class */ (function (_super) {
     };
     PluginState.DefaultSnapshotParams = PD.getDefaultValues(PluginState.SnapshotParams);
 })(PluginState || (PluginState = {}));
-//# sourceMappingURL=state.js.map

package/lib/mol-plugin/util/substructure-parent-helper.js CHANGED Viewed

@@ -100,4 +100,3 @@ var SubstructureParentHelper = /** @class */ (function () {
     };
     return SubstructureParentHelper;
 }());
-//# sourceMappingURL=substructure-parent-helper.js.map

package/lib/mol-plugin/util/task-manager.js CHANGED Viewed

@@ -137,4 +137,3 @@ var TaskManager = /** @class */ (function () {
     }
     TaskManager.testTask = testTask;
 })(TaskManager || (TaskManager = {}));
-//# sourceMappingURL=task-manager.js.map

package/lib/mol-plugin/util/toast.js CHANGED Viewed

@@ -79,4 +79,3 @@ var PluginToastManager = /** @class */ (function (_super) {
     return PluginToastManager;
 }(StatefulPluginComponent));
 export { PluginToastManager };
-//# sourceMappingURL=toast.js.map

package/lib/mol-plugin/util/viewport-screenshot.js CHANGED Viewed

@@ -134,7 +134,7 @@ var ViewportScreenshotHelper = /** @class */ (function (_super) {
                 sampleLevel: colorBufferFloat && textureFloat ? 4 : 2
             },
             postprocessing: __assign(__assign({}, c.props.postprocessing), { occlusion: aoProps.name === 'on'
-                    ? { name: 'on', params: __assign(__assign({}, aoProps.params), { samples: 128 }) }
+                    ? { name: 'on', params: __assign(__assign({}, aoProps.params), { samples: 128, resolutionScale: 1 }) }
                     : aoProps }),
             marking: __assign({}, c.props.marking)
         });
@@ -156,7 +156,7 @@ var ViewportScreenshotHelper = /** @class */ (function (_super) {
                     transparentBackground: this.values.transparent,
                     // TODO: optimize because this creates a copy of a large object!
                     postprocessing: __assign(__assign({}, c.props.postprocessing), { occlusion: aoProps.name === 'on'
-                            ? { name: 'on', params: __assign(__assign({}, aoProps.params), { samples: 128 }) }
+                            ? { name: 'on', params: __assign(__assign({}, aoProps.params), { samples: 128, resolutionScale: 1 }) }
                             : aoProps }),
                     marking: __assign({}, c.props.marking)
                 });
@@ -407,4 +407,3 @@ var ViewportScreenshotHelper = /** @class */ (function (_super) {
     };
     return ViewportScreenshotHelper;
 }(PluginComponent));
-//# sourceMappingURL=viewport-screenshot.js.map

package/lib/mol-plugin/version.js CHANGED Viewed

@@ -1,2 +1,2 @@
-export var PLUGIN_VERSION = '3.0.2';
-export var PLUGIN_VERSION_DATE = new Date(typeof __MOLSTAR_DEBUG_TIMESTAMP__ !== 'undefined' ? __MOLSTAR_DEBUG_TIMESTAMP__ : 1643574187710);
+export var PLUGIN_VERSION = '3.3.0';
+export var PLUGIN_VERSION_DATE = new Date(typeof __MOLSTAR_DEBUG_TIMESTAMP__ !== 'undefined' ? __MOLSTAR_DEBUG_TIMESTAMP__ : 1645995676444);

package/lib/mol-plugin-state/actions/file.js CHANGED Viewed

@@ -183,4 +183,3 @@ export var DownloadFile = StateAction.build({
         });
     }); });
 });
-//# sourceMappingURL=file.js.map

package/lib/mol-plugin-state/actions/structure.js CHANGED Viewed

@@ -406,4 +406,3 @@ export var AddTrajectory = StateAction.build({
         }); }).runInContext(taskCtx);
     });
 });
-//# sourceMappingURL=structure.js.map

package/lib/mol-plugin-state/actions/volume.js CHANGED Viewed

@@ -159,4 +159,3 @@ export var AssignColorVolume = StateAction.build({
     var ref = _a.ref, params = _a.params, state = _a.state;
     return plugin.build().to(ref).apply(StateTransforms.Volume.AssignColorVolume, { ref: params.ref }, { dependsOn: [params.ref] }).commit();
 });
-//# sourceMappingURL=volume.js.map

package/lib/mol-plugin-state/actions.js CHANGED Viewed

@@ -11,4 +11,3 @@ export var StateActions = {
     Volume: Volume,
     DataFormat: DataFormat
 };
-//# sourceMappingURL=actions.js.map

package/lib/mol-plugin-state/animation/built-in/assembly-unwind.js CHANGED Viewed

@@ -109,4 +109,3 @@ export var AnimateAssemblyUnwind = PluginStateAnimation.create({
         });
     }
 });
-//# sourceMappingURL=assembly-unwind.js.map

package/lib/mol-plugin-state/animation/built-in/camera-rock.js CHANGED Viewed

@@ -56,4 +56,3 @@ export var AnimateCameraRock = PluginStateAnimation.create({
         });
     }
 });
-//# sourceMappingURL=camera-rock.js.map

package/lib/mol-plugin-state/animation/built-in/camera-spin.js CHANGED Viewed

@@ -55,4 +55,3 @@ export var AnimateCameraSpin = PluginStateAnimation.create({
         });
     }
 });
-//# sourceMappingURL=camera-spin.js.map

package/lib/mol-plugin-state/animation/built-in/explode-units.js CHANGED Viewed

@@ -80,4 +80,3 @@ export var AnimateUnitsExplode = PluginStateAnimation.create({
         });
     }
 });
-//# sourceMappingURL=explode-units.js.map

package/lib/mol-plugin-state/animation/built-in/model-index.js CHANGED Viewed

@@ -166,4 +166,3 @@ export var AnimateModelIndex = PluginStateAnimation.create({
         });
     }
 });
-//# sourceMappingURL=model-index.js.map

package/lib/mol-plugin-state/animation/built-in/spin-structure.js CHANGED Viewed

@@ -83,4 +83,3 @@ export var AnimateStructureSpin = PluginStateAnimation.create({
         });
     }
 });
-//# sourceMappingURL=spin-structure.js.map

package/lib/mol-plugin-state/animation/built-in/state-interpolation.js CHANGED Viewed

@@ -75,4 +75,3 @@ export var AnimateStateInterpolation = PluginStateAnimation.create({
         });
     }
 });
-//# sourceMappingURL=state-interpolation.js.map

package/lib/mol-plugin-state/animation/built-in/state-snapshots.js CHANGED Viewed

@@ -91,4 +91,3 @@ export var AnimateStateSnapshots = PluginStateAnimation.create({
         });
     }
 });
-//# sourceMappingURL=state-snapshots.js.map

package/lib/mol-plugin-state/animation/helpers.js CHANGED Viewed

@@ -78,4 +78,3 @@ export function spinStructure(structure, unitTransforms, t, axis, origin) {
         unitTransforms.setTransform(_t, u);
     }
 }
-//# sourceMappingURL=helpers.js.map

package/lib/mol-plugin-state/animation/model.js CHANGED Viewed

@@ -20,4 +20,3 @@ var PluginStateAnimation;
     }
     PluginStateAnimation.getDuration = getDuration;
 })(PluginStateAnimation || (PluginStateAnimation = {}));
-//# sourceMappingURL=model.js.map

package/lib/mol-plugin-state/builder/data.js CHANGED Viewed

@@ -47,4 +47,3 @@ var DataBuilder = /** @class */ (function () {
     return DataBuilder;
 }());
 export { DataBuilder };
-//# sourceMappingURL=data.js.map

package/lib/mol-plugin-state/builder/preset-provider.js CHANGED Viewed

@@ -4,4 +4,3 @@
  * @author David Sehnal <david.sehnal@gmail.com>
  */
 export {};
-//# sourceMappingURL=preset-provider.js.map

package/lib/mol-plugin-state/builder/structure/hierarchy-preset.d.ts CHANGED Viewed

@@ -66,6 +66,7 @@ export declare const PresetTrajectoryHierarchy: {
         }>, "symmetry-assembly"> | undefined;
         representationPresetParams: PD.Normalize<{
             ignoreHydrogens: any;
+            ignoreLight: any;
             quality: any;
             theme: any;
         }> | undefined;
@@ -90,6 +91,7 @@ export declare const PresetTrajectoryHierarchy: {
         useDefaultIfSingleModel: boolean | undefined;
         representationPresetParams: PD.Normalize<{
             ignoreHydrogens: any;
+            ignoreLight: any;
             quality: any;
             theme: any;
         }> | undefined;

package/lib/mol-plugin-state/builder/structure/hierarchy-preset.js CHANGED Viewed

@@ -284,4 +284,3 @@ export var PresetTrajectoryHierarchy = {
     supercell: supercell,
     crystalContacts: crystalContacts,
 };
-//# sourceMappingURL=hierarchy-preset.js.map

package/lib/mol-plugin-state/builder/structure/hierarchy.d.ts CHANGED Viewed

@@ -48,6 +48,7 @@ export declare class TrajectoryHierarchyBuilder {
         }>, "symmetry-assembly"> | undefined;
         representationPresetParams: PD.Normalize<{
             ignoreHydrogens: any;
+            ignoreLight: any;
             quality: any;
             theme: any;
         }> | undefined;

package/lib/mol-plugin-state/builder/structure/hierarchy.js CHANGED Viewed

@@ -108,4 +108,3 @@ var TrajectoryHierarchyBuilder = /** @class */ (function () {
     return TrajectoryHierarchyBuilder;
 }());
 export { TrajectoryHierarchyBuilder };
-//# sourceMappingURL=hierarchy.js.map