grnsight 4.0.0 → 6.0.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (458) hide show
  1. package/.travis.yml +3 -1
  2. package/GRNsight - Beta.html +194 -0
  3. package/Gemfile.lock +259 -0
  4. package/README.md +2 -2
  5. package/_gh_pages/about.html +360 -45
  6. package/_gh_pages/assets/css/footer.css +3 -0
  7. package/_gh_pages/assets/css/main.css +28 -14
  8. package/_gh_pages/assets/images/21-genes_31-edges_Schade-data_estimation_output_binary-no-targetless-genes_sif.png +0 -0
  9. package/_gh_pages/assets/images/21-genes_31-edges_Schade-data_estimation_output_binary_sif.png +0 -0
  10. package/_gh_pages/assets/images/21-genes_31-edges_Schade-data_graphml_3-edges-and-footer.png +0 -0
  11. package/_gh_pages/assets/images/21-genes_31-edges_Schade-data_graphml_header-and-3-nodes.png +0 -0
  12. package/_gh_pages/assets/images/21-genes_31-edges_Schade-data_graphml_output_3-edges-and-footer.png +0 -0
  13. package/_gh_pages/assets/images/21-genes_31-edges_Schade-data_graphml_output_header-and-3-nodes.png +0 -0
  14. package/_gh_pages/assets/images/21-genes_31-edges_Schade-data_input_binary-no-targetless-genes_sif.png +0 -0
  15. package/_gh_pages/assets/images/21-genes_31-edges_Schade-data_input_binary_sif.png +0 -0
  16. package/_gh_pages/assets/images/21-genes_31-edges_Schade-data_input_concatenated-no-targetless-genes_sif.png +0 -0
  17. package/_gh_pages/assets/images/21-genes_31-edges_Schade-data_input_concatenated_sif.png +0 -0
  18. package/_gh_pages/assets/images/Choe-Shin_CMSI402-poster-session_20180430.jpg +0 -0
  19. package/_gh_pages/assets/images/Choe_SCCUR_2017.jpg +0 -0
  20. package/_gh_pages/assets/images/Dahlquist-Choe-Shin_CMSI402-poster-session_20180430.jpg +0 -0
  21. package/_gh_pages/assets/images/Dionisio-Dahlquist_GRNsight-shades_20170506.jpg +0 -0
  22. package/_gh_pages/assets/images/Klein_Samdarshi_TriBeta_2018_20180317.jpg +0 -0
  23. package/_gh_pages/assets/images/Shin_SCCUR_2017.jpg +0 -0
  24. package/{documents/manuscripts/peerj-computerscience-2016/figures/submitted-versions/Figure1_zoom145_900pix-wide.png → _gh_pages/assets/images/demo-3_network-sheet.png} +0 -0
  25. package/{documents/manuscripts/peerj-computerscience-2016/figures/submitted-versions/Figure2_zoom145_900pix-wide.png → _gh_pages/assets/images/demo-4_network-optimized-weights-sheet.png} +0 -0
  26. package/_gh_pages/assets/images/gene-pages-0.png +0 -0
  27. package/_gh_pages/assets/images/gene-pages-1.png +0 -0
  28. package/_gh_pages/assets/images/gene-pages-2.png +0 -0
  29. package/_gh_pages/assets/images/gene-pages-3.png +0 -0
  30. package/_gh_pages/assets/images/grnsight2020.png +0 -0
  31. package/_gh_pages/assets/images/v3demo2-grid+nodecoloring.png +0 -0
  32. package/_gh_pages/assets/images/v3demo2-nodecoloring.png +0 -0
  33. package/_gh_pages/assets/images/v3demo2.png +0 -0
  34. package/_gh_pages/assets/js/ga-report.js +11 -11
  35. package/_gh_pages/assets/js/iframeResizer.min.js +9 -0
  36. package/_gh_pages/assets/js/main.js +43 -43
  37. package/_gh_pages/beta.html +29 -24
  38. package/_gh_pages/contact.html +31 -31
  39. package/_gh_pages/coverage/coverage.json +1 -0
  40. package/_gh_pages/coverage/coverage.raw.json +1 -0
  41. package/_gh_pages/coverage/lcov-report/base.css +223 -0
  42. package/_gh_pages/coverage/lcov-report/block-navigation.js +63 -0
  43. package/_gh_pages/coverage/lcov-report/controllers/additional-sheet-parser.js.html +330 -0
  44. package/_gh_pages/coverage/lcov-report/controllers/constants.js.html +243 -0
  45. package/_gh_pages/coverage/lcov-report/controllers/export-controller.js.html +285 -0
  46. package/_gh_pages/coverage/lcov-report/controllers/exporters/graphml.js.html +405 -0
  47. package/_gh_pages/coverage/lcov-report/controllers/exporters/index.html +110 -0
  48. package/_gh_pages/coverage/lcov-report/controllers/exporters/sif.js.html +150 -0
  49. package/_gh_pages/coverage/lcov-report/controllers/helpers.js.html +114 -0
  50. package/_gh_pages/coverage/lcov-report/controllers/import-controller.js.html +233 -0
  51. package/_gh_pages/coverage/lcov-report/controllers/importers/graphml.js.html +716 -0
  52. package/_gh_pages/coverage/lcov-report/controllers/importers/index.html +106 -0
  53. package/_gh_pages/coverage/lcov-report/controllers/importers/sif.js.html +488 -0
  54. package/_gh_pages/coverage/lcov-report/controllers/index.html +162 -0
  55. package/_gh_pages/coverage/lcov-report/controllers/semantic-checker.js.html +810 -0
  56. package/_gh_pages/coverage/lcov-report/controllers/spreadsheet-controller.js.html +1779 -0
  57. package/_gh_pages/coverage/lcov-report/index.html +136 -0
  58. package/_gh_pages/coverage/lcov-report/prettify.css +1 -0
  59. package/_gh_pages/coverage/lcov-report/prettify.js +1 -0
  60. package/_gh_pages/coverage/lcov-report/server/controllers/additional-sheet-parser.js.html +330 -0
  61. package/_gh_pages/coverage/lcov-report/server/controllers/constants.js.html +243 -0
  62. package/_gh_pages/coverage/lcov-report/server/controllers/export-controller.js.html +285 -0
  63. package/_gh_pages/coverage/lcov-report/server/controllers/exporters/graphml.js.html +405 -0
  64. package/_gh_pages/coverage/lcov-report/server/controllers/exporters/index.html +110 -0
  65. package/_gh_pages/coverage/lcov-report/server/controllers/exporters/sif.js.html +150 -0
  66. package/_gh_pages/coverage/lcov-report/server/controllers/graphml-constants.js.html +585 -0
  67. package/_gh_pages/coverage/lcov-report/server/controllers/helpers.js.html +114 -0
  68. package/_gh_pages/coverage/lcov-report/server/controllers/import-controller.js.html +237 -0
  69. package/_gh_pages/coverage/lcov-report/server/controllers/importers/graphml.js.html +585 -0
  70. package/_gh_pages/coverage/lcov-report/server/controllers/importers/index.html +110 -0
  71. package/_gh_pages/coverage/lcov-report/server/controllers/importers/sif.js.html +492 -0
  72. package/_gh_pages/coverage/lcov-report/server/controllers/index.html +188 -0
  73. package/_gh_pages/coverage/lcov-report/server/controllers/semantic-checker.js.html +810 -0
  74. package/_gh_pages/coverage/lcov-report/server/controllers/spreadsheet-controller.js.html +1779 -0
  75. package/_gh_pages/coverage/lcov-report/sort-arrow-sprite.png +0 -0
  76. package/_gh_pages/coverage/lcov-report/sorter.js +158 -0
  77. package/_gh_pages/coverage/lcov-report/web-client/public/js/grnstate.js.html +225 -0
  78. package/_gh_pages/coverage/lcov-report/web-client/public/js/index.html +97 -0
  79. package/_gh_pages/coverage/lcov.info +49 -0
  80. package/_gh_pages/documentation.html +998 -320
  81. package/_gh_pages/documents/abstracts/SIGGRAPH 2017 Abstract/siggraph-abstract-review.aux +47 -0
  82. package/_gh_pages/documents/abstracts/SIGGRAPH 2017 Abstract/siggraph-abstract-review.bbl +73 -0
  83. package/_gh_pages/documents/abstracts/SIGGRAPH 2017 Abstract/siggraph-abstract-review.blg +52 -0
  84. package/_gh_pages/documents/abstracts/SIGGRAPH 2017 Abstract/siggraph-abstract-review.log +1056 -0
  85. package/_gh_pages/documents/abstracts/SIGGRAPH 2017 Abstract/siggraph-abstract-review.out +7 -0
  86. package/_gh_pages/documents/abstracts/SIGGRAPH 2017 Abstract/siggraph-abstract-review.synctex.gz +0 -0
  87. package/_gh_pages/documents/manuscripts/peerj-computerscience-2016/revisions/GRNsight_PeerJ-CS_manuscript_2016_text-only_revised-Dondi.docx +0 -0
  88. package/_gh_pages/encryption/server.cert +21 -0
  89. package/_gh_pages/encryption/server.key +28 -0
  90. package/_gh_pages/favicon.ico +0 -0
  91. package/_gh_pages/index.html +45 -22
  92. package/_gh_pages/links.html +47 -28
  93. package/_gh_pages/news.html +103 -21
  94. package/_gh_pages/onlyfooter.html +78 -0
  95. package/_gh_pages/onlyheader.html +64 -0
  96. package/_gh_pages/onlysidebar.html +73 -0
  97. package/_gh_pages/package-lock.json +14048 -0
  98. package/_gh_pages/people.html +129 -40
  99. package/_gh_pages/privacy.html +23 -17
  100. package/_gh_pages/publications.html +75 -33
  101. package/_gh_pages/robots.txt +1 -0
  102. package/_gh_pages/sitemap.xml +87 -74
  103. package/_gh_pages/test-files/import-samples/attributes.graphml +40 -0
  104. package/_gh_pages/test-files/import-samples/port.graphml +32 -0
  105. package/_gh_pages/test-files/import-samples/simple.graphml +31 -0
  106. package/_gh_pages/web-client/public/js/grnsight.min.js +2347 -0
  107. package/_gh_pages/web-client/public/stylesheets/grnsight.css +443 -0
  108. package/coverage/coverage.json +1 -1
  109. package/coverage/lcov.info +1847 -1142
  110. package/database/README.md +1 -0
  111. package/database/network-database/README.md +44 -0
  112. package/database/network-database/schema.sql +24 -0
  113. package/database/network-database/scripts/filter_genes.py +76 -0
  114. package/database/network-database/scripts/generate_network.py +199 -0
  115. package/database/network-database/scripts/generate_sgd_network_from_yeastract_network.py +120 -0
  116. package/database/network-database/scripts/loader.py +78 -0
  117. package/package.json +20 -11
  118. package/server/app.js +7 -2
  119. package/server/config/config.js +12 -3
  120. package/server/controllers/additional-sheet-parser.js +292 -55
  121. package/server/controllers/constants.js +4 -37
  122. package/server/controllers/custom-workbook-controller.js +66 -0
  123. package/server/controllers/demo-workbooks.js +5973 -0
  124. package/server/controllers/export-constants.js +78 -0
  125. package/server/controllers/export-controller.js +4 -3
  126. package/server/controllers/exporters/graphml.js +15 -15
  127. package/server/controllers/exporters/sif.js +7 -7
  128. package/server/controllers/exporters/xlsx.js +110 -34
  129. package/server/controllers/expression-database-controller.js +19 -0
  130. package/server/controllers/expression-sheet-parser.js +170 -0
  131. package/server/controllers/graphml-constants.js +0 -17
  132. package/server/controllers/helpers.js +25 -1
  133. package/server/controllers/import-controller.js +2 -2
  134. package/server/controllers/importers/graphml.js +17 -20
  135. package/server/controllers/importers/sif.js +22 -18
  136. package/server/controllers/network-database-controller.js +18 -0
  137. package/server/controllers/network-sheet-parser.js +307 -0
  138. package/server/controllers/semantic-checker.js +30 -162
  139. package/server/controllers/sif-constants.js +36 -0
  140. package/server/controllers/spreadsheet-controller.js +277 -425
  141. package/server/controllers/workbook-constants.js +521 -0
  142. package/server/dals/expression-dal.js +122 -0
  143. package/server/dals/network-dal.js +96 -0
  144. package/test/additional-sheet-parser-tests.js +147 -38
  145. package/test/api-tests.js +3 -6
  146. package/test/errors-adjacency-matrix-modifications.js +30 -29
  147. package/test/errors-graph-tests.js +4 -4
  148. package/test/errors-sheet-modifications.js +10 -2
  149. package/test/export-tests.js +187 -60
  150. package/test/expression-data-import-tests.js +113 -0
  151. package/test/grnstate-tests.js +8 -2
  152. package/test/import-graphml-tests.js +59 -40
  153. package/test/import-sif-tests.js +50 -37
  154. package/test/test.js +554 -91
  155. package/test/warnings-adjacency-matrix-modifications.js +8 -7
  156. package/test-files/additional-sheet-test-files/optimization-diagnostics-default.xlsx +0 -0
  157. package/test-files/additional-sheet-test-files/optimization-diagnostics-extraneous-data.xlsx +0 -0
  158. package/test-files/additional-sheet-test-files/optimization-diagnostics-incorrect-MSE-gene-header.xlsx +0 -0
  159. package/test-files/additional-sheet-test-files/optimization-diagnostics-incorrect-MSE-header.xlsx +0 -0
  160. package/test-files/additional-sheet-test-files/optimization-diagnostics-incorrect-column-headers.xlsx +0 -0
  161. package/test-files/additional-sheet-test-files/optimization-diagnostics-invalid-MSE-data.xlsx +0 -0
  162. package/test-files/additional-sheet-test-files/optimization-diagnostics-invalid-value.xlsx +0 -0
  163. package/test-files/additional-sheet-test-files/optimization-diagnostics-missing-MSE-data.xlsx +0 -0
  164. package/test-files/additional-sheet-test-files/optimization-diagnostics-missing-column-headers.xlsx +0 -0
  165. package/test-files/additional-sheet-test-files/optimization-diagnostics-missing-header.xlsx +0 -0
  166. package/test-files/additional-sheet-test-files/optimization-diagnostics-unknown-parameter.xlsx +0 -0
  167. package/test-files/additional-sheet-test-files/optimization-parameters-default.xlsx +0 -0
  168. package/test-files/additional-sheet-test-files/optimization-parameters-incorrect-headers.xlsx +0 -0
  169. package/test-files/additional-sheet-test-files/optimization-parameters-invalid-optimization-parameter.xlsx +0 -0
  170. package/test-files/additional-sheet-test-files/optimization-parameters-missing-headers.xlsx +0 -0
  171. package/test-files/additional-sheet-test-files/optimization-parameters-unknown-parameter.xlsx +0 -0
  172. package/test-files/additional-sheet-test-files/two-column-sheets-extraneous-data.xlsx +0 -0
  173. package/test-files/additional-sheet-test-files/two-column-sheets-incorrect-cell-A1.xlsx +0 -0
  174. package/test-files/additional-sheet-test-files/two-column-sheets-incorrect-column-header.xlsx +0 -0
  175. package/test-files/additional-sheet-test-files/two-column-sheets-invalid-gene-length.xlsx +0 -0
  176. package/test-files/additional-sheet-test-files/two-column-sheets-invalid-gene-type.xlsx +0 -0
  177. package/test-files/additional-sheet-test-files/two-column-sheets-invalid-value.xlsx +0 -0
  178. package/test-files/additional-sheet-test-files/two-column-sheets-missing-column-header.xlsx +0 -0
  179. package/test-files/additional-sheet-test-files/two-column-sheets-special-character.xlsx +0 -0
  180. package/test-files/adjacency-matrix-modifications/asymmetric-gene-order-input.xlsx +0 -0
  181. package/test-files/adjacency-matrix-modifications/asymmetric-gene-order-output.xlsx +0 -0
  182. package/test-files/adjacency-matrix-modifications/extra-column-adjacent-input.xlsx +0 -0
  183. package/test-files/adjacency-matrix-modifications/extra-column-adjacent-output.xlsx +0 -0
  184. package/test-files/adjacency-matrix-modifications/extra-column-end-of-sheet-input.xlsx +0 -0
  185. package/test-files/adjacency-matrix-modifications/extra-column-end-of-sheet-output.xlsx +0 -0
  186. package/test-files/adjacency-matrix-modifications/extra-data-random-cell-both-output.xlsx +0 -0
  187. package/test-files/adjacency-matrix-modifications/extra-data-random-cell-network-only-input.xlsx +0 -0
  188. package/test-files/adjacency-matrix-modifications/extra-data-random-cell-network-only-output.xlsx +0 -0
  189. package/test-files/adjacency-matrix-modifications/extra-data-random-cell-network-optimized-only-output.xlsx +0 -0
  190. package/test-files/adjacency-matrix-modifications/extra-row-end-of-sheet-input.xlsx +0 -0
  191. package/test-files/adjacency-matrix-modifications/extra-row-end-of-sheet-output.xlsx +0 -0
  192. package/test-files/adjacency-matrix-modifications/incorrect-network-cell-A1.xlsx +0 -0
  193. package/test-files/adjacency-matrix-modifications/missing-column-end-input.xlsx +0 -0
  194. package/test-files/adjacency-matrix-modifications/missing-column-end-output.xlsx +0 -0
  195. package/test-files/adjacency-matrix-modifications/missing-data-input.xlsx +0 -0
  196. package/test-files/adjacency-matrix-modifications/missing-data-output.xlsx +0 -0
  197. package/test-files/adjacency-matrix-modifications/missing-row-end-input.xlsx +0 -0
  198. package/test-files/adjacency-matrix-modifications/missing-row-end-output.xlsx +0 -0
  199. package/test-files/adjacency-matrix-modifications/missing-row-middle-input.xlsx +0 -0
  200. package/test-files/adjacency-matrix-modifications/missing-row-middle-output.xlsx +0 -0
  201. package/test-files/adjacency-matrix-modifications/missing-value-bottom-corner-input.xlsx +0 -0
  202. package/test-files/adjacency-matrix-modifications/missing-value-bottom-corner-output.xlsx +0 -0
  203. package/test-files/adjacency-matrix-modifications/value-replaced-w-spaces-both-output.xlsx +0 -0
  204. package/test-files/adjacency-matrix-modifications/value-replaced-w-spaces-net-only-input.xlsx +0 -0
  205. package/test-files/adjacency-matrix-modifications/value-replaced-w-spaces-net-op-only-output.xlsx +0 -0
  206. package/test-files/adjacency-matrix-modifications/value-replaced/342/200/223w-spaces-net-only-output.xlsx +0 -0
  207. package/test-files/demo-files/15-genes_28-edges_db5_Dahlquist-data_estimation_output.xlsx +0 -0
  208. package/test-files/demo-files/15-genes_28-edges_db5_Dahlquist-data_input.xlsx +0 -0
  209. package/test-files/expression-data-test-sheets/expression_sheet_correct_numbering.xlsx +0 -0
  210. package/test-files/expression-data-test-sheets/expression_sheet_different_number_of_columns.xlsx +0 -0
  211. package/test-files/expression-data-test-sheets/expression_sheet_empty_column.xlsx +0 -0
  212. package/test-files/expression-data-test-sheets/expression_sheet_empty_row.xlsx +0 -0
  213. package/test-files/expression-data-test-sheets/expression_sheet_erroneous_data.xlsx +0 -0
  214. package/test-files/expression-data-test-sheets/expression_sheet_extra_gene_name.xlsx +0 -0
  215. package/test-files/expression-data-test-sheets/expression_sheet_incorrectly_ordered_time_points.xlsx +0 -0
  216. package/test-files/expression-data-test-sheets/expression_sheet_mismatched_case_gene_names.xlsx +0 -0
  217. package/test-files/expression-data-test-sheets/expression_sheet_mismatched_gene_names.xlsx +0 -0
  218. package/test-files/expression-data-test-sheets/expression_sheet_missing_column_header.xlsx +0 -0
  219. package/test-files/expression-data-test-sheets/expression_sheet_missing_data_error.xlsx +0 -0
  220. package/test-files/expression-data-test-sheets/expression_sheet_missing_data_ok.xlsx +0 -0
  221. package/test-files/expression-data-test-sheets/expression_sheet_missing_data_ok_export_exact.xlsx +0 -0
  222. package/test-files/expression-data-test-sheets/expression_sheet_missing_gene_name.xlsx +0 -0
  223. package/test-files/expression-data-test-sheets/expression_sheet_name_not_in_optparams.xlsx +0 -0
  224. package/test-files/expression-data-test-sheets/expression_sheet_name_not_present.xlsx +0 -0
  225. package/test-files/expression-data-test-sheets/expression_sheet_negative_time_points.xlsx +0 -0
  226. package/test-files/expression-data-test-sheets/expression_sheet_non_numerical_time_points.xlsx +0 -0
  227. package/test-files/expression-data-test-sheets/expression_sheet_not_existing.xlsx +0 -0
  228. package/test-files/expression-data-test-sheets/expression_sheet_wrong_id_label.xlsx +0 -0
  229. package/test-files/expression-data-test-sheets/expression_sheet_wrong_order_gene_names.xlsx +0 -0
  230. package/test-files/expression-data-test-sheets/expression_sheet_wrong_sheet_name_case.xlsx +0 -0
  231. package/test-files/expression-data-test-sheets/expression_sheet_wrong_sheet_name_convention.xlsx +0 -0
  232. package/test-files/gene-name-modifications/NaN-as-gene-name-input.xlsx +0 -0
  233. package/test-files/gene-name-modifications/NaN-as-gene-name-output.xlsx +0 -0
  234. package/test-files/gene-name-modifications/mismatched-case-related-input.xlsx +0 -0
  235. package/test-files/gene-name-modifications/mismatched-case-related-output.xlsx +0 -0
  236. package/test-files/gene-name-modifications/mismatched-case-unrelated-input.xlsx +0 -0
  237. package/test-files/gene-name-modifications/mismatched-case-unrelated-output.xlsx +0 -0
  238. package/test-files/graph-tests/different-sized-networks/{80-genes-0-edges.xlsx → 134-genes-0-edges.xlsx} +0 -0
  239. package/test-files/graph-tests/different-sized-networks/{45-genes-max-edges.xlsx → 44-source-genes-45-target-genes-max-edges.xlsx} +0 -0
  240. package/test-files/graph-tests/different-sized-networks/{1-gene-0-edges.xlsx → unused-files/1-gene-0-edges.xlsx} +0 -0
  241. package/test-files/graph-tests/different-sized-networks/{1-gene-1-edges.xlsx → unused-files/1-gene-1-edges.xlsx} +0 -0
  242. package/test-files/graph-tests/different-sized-networks/{10-genes-50-edges.xlsx → unused-files/10-genes-50-edges.xlsx} +0 -0
  243. package/test-files/graph-tests/different-sized-networks/{10-genes-90-edges.xlsx → unused-files/10-genes-90-edges.xlsx} +0 -0
  244. package/test-files/graph-tests/different-sized-networks/{100-genes-0-edges.xlsx → unused-files/100-genes-0-edges.xlsx} +0 -0
  245. package/test-files/graph-tests/different-sized-networks/{110-genes-0-edges.xlsx → unused-files/110-genes-0-edges.xlsx} +0 -0
  246. package/test-files/graph-tests/different-sized-networks/{120-genes-0-edges.xlsx → unused-files/120-genes-0-edges.xlsx} +0 -0
  247. package/test-files/graph-tests/different-sized-networks/{130-genes-0-edges.xlsx → unused-files/130-genes-0-edges.xlsx} +0 -0
  248. package/test-files/graph-tests/different-sized-networks/{140-genes-0-edges.xlsx → unused-files/140-genes-0-edges.xlsx} +0 -0
  249. package/test-files/graph-tests/different-sized-networks/{150-genes-10000-edges.xlsx → unused-files/150-genes-10000-edges.xlsx} +0 -0
  250. package/test-files/graph-tests/different-sized-networks/{150-genes-20000-edges.xlsx → unused-files/150-genes-20000-edges.xlsx} +0 -0
  251. package/test-files/graph-tests/different-sized-networks/{150-genes-max-edges.xlsx → unused-files/150-genes-max-edges.xlsx} +0 -0
  252. package/test-files/graph-tests/different-sized-networks/{160-genes-max-edges.xlsx → unused-files/160-genes-max-edges.xlsx} +0 -0
  253. package/test-files/graph-tests/different-sized-networks/{20-genes-max-edges.xlsx → unused-files/20-genes-max-edges.xlsx} +0 -0
  254. package/test-files/graph-tests/different-sized-networks/{25-genes-max-edges.xlsx → unused-files/25-genes-max-edges.xlsx} +0 -0
  255. package/test-files/graph-tests/different-sized-networks/{30-genes-max-edges.xlsx → unused-files/30-genes-max-edges.xlsx} +0 -0
  256. package/test-files/graph-tests/different-sized-networks/{34-genes-0-edges.xlsx → unused-files/34-genes-0-edges.xlsx} +0 -0
  257. package/test-files/graph-tests/different-sized-networks/{34-genes-40-edges.xlsx → unused-files/34-genes-40-edges.xlsx} +0 -0
  258. package/test-files/graph-tests/different-sized-networks/{34-genes-65-edges.xlsx → unused-files/34-genes-65-edges.xlsx} +0 -0
  259. package/test-files/graph-tests/different-sized-networks/{34-genes-90-edges.xlsx → unused-files/34-genes-90-edges.xlsx} +0 -0
  260. package/test-files/graph-tests/different-sized-networks/{5-genes-max-edges.xlsx → unused-files/5-genes-max-edges.xlsx} +0 -0
  261. package/test-files/graph-tests/different-sized-networks/{51-genes-max-edges.xlsx → unused-files/51-genes-max-edges.xlsx} +0 -0
  262. package/test-files/graph-tests/different-sized-networks/{52-genes-max-edges.xlsx → unused-files/52-genes-max-edges.xlsx} +0 -0
  263. package/test-files/graph-tests/different-sized-networks/{55-genes-0-edges.xlsx → unused-files/55-genes-0-edges.xlsx} +0 -0
  264. package/test-files/graph-tests/different-sized-networks/{55-genes-max-edges.xlsx → unused-files/55-genes-max-edges.xlsx} +0 -0
  265. package/test-files/graph-tests/different-sized-networks/{65-genes-0-edges.xlsx → unused-files/65-genes-0-edges.xlsx} +0 -0
  266. package/test-files/graph-tests/different-sized-networks/{7-genes-max-edges.xlsx → unused-files/7-genes-max-edges.xlsx} +0 -0
  267. package/test-files/graph-tests/different-sized-networks/{70-genes-0-edges.xlsx → unused-files/70-genes-0-edges.xlsx} +0 -0
  268. package/test-files/graph-tests/different-sized-networks/{9-genes-max-edges.xlsx → unused-files/9-genes-max-edges.xlsx} +0 -0
  269. package/test-files/graph-tests/different-sized-networks/{90-genes-0-edges.xlsx → unused-files/90-genes-0-edges.xlsx} +0 -0
  270. package/test-files/graph-tests/different-sized-networks/{regulation-matrix-documented-20140709-AllTF-all-targets.xlsx → unused-files/regulation-matrix-documented-20140709-AllTF-all-targets.xlsx} +0 -0
  271. package/test-files/node-tests/long-gene-name-no-spaces-first.xlsx +0 -0
  272. package/test-files/node-tests/long-gene-name-no-spaces-second.xlsx +0 -0
  273. package/test-files/node-tests/long-gene-name-spaces.xlsx +0 -0
  274. package/test-files/species-test-data/15-genes_28-edges_db5_Dahlquist-data_input_no-species.xlsx +0 -0
  275. package/test-files/species-test-data/15-genes_28-edges_db5_Dahlquist-data_input_with-species.xlsx +0 -0
  276. package/test-files/species-test-data/3-gene_7-edge_elegans.xlsx +0 -0
  277. package/test-files/species-test-data/3-gene_7-edge_melanogaster.xlsx +0 -0
  278. package/test-files/species-test-data/3-gene_7-edge_musculus.xlsx +0 -0
  279. package/test-files/species-test-data/3-gene_7-edge_sapiens.xlsx +0 -0
  280. package/test-files/species-test-data/kev-fake-data-sapiens-no-exp-data.xlsx +0 -0
  281. package/test-files/spreadsheet-controller-test-files/sheet-name-capitalized-network-optimized-weights.xlsx +0 -0
  282. package/test-files/spreadsheet-controller-test-files/sheet-name-capitalized-network.xlsx +0 -0
  283. package/web-client/app.js +1 -1
  284. package/web-client/controllers/main.js +1 -1
  285. package/web-client/public/favicon.ico +0 -0
  286. package/web-client/public/gene/api.js +76 -14
  287. package/web-client/public/gene/info.js +19 -8
  288. package/web-client/public/js/api/grnsight-api.js +124 -0
  289. package/web-client/public/js/constants.js +90 -17
  290. package/web-client/public/js/createNetwork.js +195 -0
  291. package/web-client/public/js/graph-statistics.js +7 -7
  292. package/web-client/public/js/graph.js +369 -324
  293. package/web-client/public/js/grnsight.js +2 -2
  294. package/web-client/public/js/grnsight.min.js +128 -59
  295. package/web-client/public/js/grnstate.js +54 -30
  296. package/web-client/public/js/iframe-coordination.js +55 -0
  297. package/web-client/public/js/setup-handlers.js +358 -18
  298. package/web-client/public/js/setup-load-and-import-handlers.js +105 -66
  299. package/web-client/public/js/update-app.js +483 -93
  300. package/web-client/public/js/upload.js +349 -32
  301. package/web-client/public/js/warnings.js +13 -51
  302. package/web-client/public/lib/iframeSizer.contentWindow.min.js +10 -0
  303. package/web-client/public/stylesheets/grnsight.styl +323 -28
  304. package/web-client/views/components/demo.pug +10 -0
  305. package/web-client/views/{graph.jade → graph.pug} +0 -0
  306. package/web-client/views/{info.jade → info.pug} +1 -5
  307. package/web-client/views/upload.pug +580 -0
  308. package/_gh_pages/Gemfile +0 -7
  309. package/_gh_pages/Gemfile.lock +0 -129
  310. package/documents/SDF/CMSI_402/spring_2014/Southwick_CMSI402_Spring2014_software-development-plan.md +0 -71
  311. package/documents/SDF/CMSI_402/spring_2014/Southwick_CMSI402_Spring2014_software-requirements-specification.md +0 -71
  312. package/documents/SDF/CMSI_402/spring_2014/use-case-diagram-spring-2014.jpg +0 -0
  313. package/documents/SDF/CMSI_402/spring_2017/Anguiano_402_Final_Presentation.pptx +0 -0
  314. package/documents/SDF/CMSI_402/spring_2017/Anguiano_402_Presentation_Final_Poster.pdf +0 -0
  315. package/documents/SDF/CMSI_402/spring_2017/Anguiano_CMSI402_Spring2017_project-proposal-presentation.pptx +0 -0
  316. package/documents/SDF/CMSI_402/spring_2017/Anguiano_CMSI402_Spring2017_project-proposal.docx +0 -0
  317. package/documents/SDF/CMSI_402/spring_2017/Anguiano_CMSI402_Spring2017_software-development-plan.docx +0 -0
  318. package/documents/SDF/CMSI_402/spring_2017/Anguiano_CMSI402_Spring2017_software-requirements-specification.docx +0 -0
  319. package/documents/SDF/CMSI_402/spring_2017/Design Review Presentation.pptx +0 -0
  320. package/documents/SDF/CMSI_402/spring_2018/0402report.docx +0 -0
  321. package/documents/SDF/CMSI_402/spring_2018/0409report.docx +0 -0
  322. package/documents/SDF/CMSI_402/spring_2018/402-gantt.png +0 -0
  323. package/documents/SDF/CMSI_402/spring_2018/402SRS_GRNSightFeedback01.txt +0 -28
  324. package/documents/SDF/CMSI_402/spring_2018/402_SPD.md +0 -223
  325. package/documents/SDF/CMSI_402/spring_2018/ChoeShinCMSI402_Final.pptx +0 -0
  326. package/documents/SDF/CMSI_402/spring_2018/ProjectProposal.md +0 -22
  327. package/documents/SDF/CMSI_402/spring_2018/SoftwareRequirementsSpecification.md +0 -88
  328. package/documents/SDF/CMSI_402/spring_2018/homework/choe_eileen/Choe_Eileen_CMSI 402_HW1.pdf +0 -0
  329. package/documents/SDF/CMSI_402/spring_2018/homework/choe_eileen/Choe_Eileen_CMSI402_HW2.pdf +0 -0
  330. package/documents/SDF/CMSI_402/spring_2018/homework/shin_jen/402hw2.docx +0 -0
  331. package/documents/SDF/CMSI_402/spring_2018/homework/shin_jen/Jen - 402Hw1.docx +0 -0
  332. package/documents/SDF/CMSI_402/spring_2018/homework/shin_jen/Jen - hw3.docx +0 -0
  333. package/documents/SDF/CMSI_402/spring_2018/writtenStatusReport.docx +0 -0
  334. package/documents/SDF/CMSI_402/spring_2018/writtenStatusReport4 +0 -0
  335. package/documents/abstracts/Anguiano_Varshneya_Undergraduate-Research-Symposium_2017_abstract.pdf +0 -0
  336. package/documents/abstracts/SIGGRAPH 2017 Abstract/ACM-Reference-Format.bst +0 -3478
  337. package/documents/abstracts/SIGGRAPH 2017 Abstract/Figure1_zoom100.png +0 -0
  338. package/documents/abstracts/SIGGRAPH 2017 Abstract/acmart.cls +0 -2352
  339. package/documents/abstracts/SIGGRAPH 2017 Abstract/acmart.ins +0 -29
  340. package/documents/abstracts/SIGGRAPH 2017 Abstract/always-weights.png +0 -0
  341. package/documents/abstracts/SIGGRAPH 2017 Abstract/auto.png +0 -0
  342. package/documents/abstracts/SIGGRAPH 2017 Abstract/networkA.png +0 -0
  343. package/documents/abstracts/SIGGRAPH 2017 Abstract/networkB-normalized.png +0 -0
  344. package/documents/abstracts/SIGGRAPH 2017 Abstract/networkB.png +0 -0
  345. package/documents/abstracts/SIGGRAPH 2017 Abstract/never-weights.png +0 -0
  346. package/documents/abstracts/SIGGRAPH 2017 Abstract/representative-image/screenshot.jpg +0 -0
  347. package/documents/abstracts/SIGGRAPH 2017 Abstract/representative-image/screenshot3x2.png +0 -0
  348. package/documents/abstracts/SIGGRAPH 2017 Abstract/representative-image/withweights3x2.png +0 -0
  349. package/documents/abstracts/SIGGRAPH 2017 Abstract/screenshot-auto.png +0 -0
  350. package/documents/abstracts/SIGGRAPH 2017 Abstract/siggraph-abstract-review.bib +0 -85
  351. package/documents/abstracts/SIGGRAPH 2017 Abstract/siggraph-abstract-review.pdf +0 -0
  352. package/documents/abstracts/SIGGRAPH 2017 Abstract/siggraph-abstract-review.tex +0 -235
  353. package/documents/abstracts/SWE Collegiate Competition 2017.md +0 -9
  354. package/documents/abstracts/Samdarshi_GRNsight_SoCalSysBio_Abstract_2019.docx +0 -0
  355. package/documents/abstracts/Varshneya_Samdarshi_Southern-California-Systems-Biology_2017_abstract.docx +0 -0
  356. package/documents/abstracts/~$mdarshi_SoCalSysBio_Abstract_2019.docx +0 -0
  357. package/documents/developer_documents/State Diagram.graphml +0 -3525
  358. package/documents/developer_documents/graphml/State Diagram.graphml +0 -3115
  359. package/documents/developer_documents/older_versions/GRNsight State Diagram old.png +0 -0
  360. package/documents/developer_documents/older_versions/GRNsight State Diagram.png +0 -0
  361. package/documents/developer_documents/testing_script_generator/GRNsightTestingDocument.md +0 -998
  362. package/documents/developer_documents/testing_script_generator/featureList.json +0 -496
  363. package/documents/developer_documents/testing_script_generator/testing-script-generator.js +0 -149
  364. package/documents/manuscripts/peerj-computerscience-2016/GRNsight_PeerJ-CS_conference-presentations_2016.docx +0 -0
  365. package/documents/manuscripts/peerj-computerscience-2016/GRNsight_PeerJ-CS_manuscript_2016.docx +0 -0
  366. package/documents/manuscripts/peerj-computerscience-2016/GRNsight_PeerJ-CS_manuscript_2016_Table1.docx +0 -0
  367. package/documents/manuscripts/peerj-computerscience-2016/GRNsight_PeerJ-CS_manuscript_2016_references.rtf +0 -264
  368. package/documents/manuscripts/peerj-computerscience-2016/GRNsight_PeerJ-CS_manuscript_2016_text-only.docx +0 -0
  369. package/documents/manuscripts/peerj-computerscience-2016/figures/other-versions/21-genes_31-edges_Schade-data_for-screenshots.xlsx +0 -0
  370. package/documents/manuscripts/peerj-computerscience-2016/figures/other-versions/Figure1_zoom100.jpg +0 -0
  371. package/documents/manuscripts/peerj-computerscience-2016/figures/other-versions/Figure1_zoom100.png +0 -0
  372. package/documents/manuscripts/peerj-computerscience-2016/figures/other-versions/Figure1_zoom100.psd +0 -0
  373. package/documents/manuscripts/peerj-computerscience-2016/figures/other-versions/Figure1_zoom145.jpg +0 -0
  374. package/documents/manuscripts/peerj-computerscience-2016/figures/other-versions/Figure1_zoom145.png +0 -0
  375. package/documents/manuscripts/peerj-computerscience-2016/figures/other-versions/Figure1_zoom145.psd +0 -0
  376. package/documents/manuscripts/peerj-computerscience-2016/figures/other-versions/Figure1_zoom145_900pix-wide.psd +0 -0
  377. package/documents/manuscripts/peerj-computerscience-2016/figures/other-versions/Figure2_zoom100.jpg +0 -0
  378. package/documents/manuscripts/peerj-computerscience-2016/figures/other-versions/Figure2_zoom100.png +0 -0
  379. package/documents/manuscripts/peerj-computerscience-2016/figures/other-versions/Figure2_zoom100.psd +0 -0
  380. package/documents/manuscripts/peerj-computerscience-2016/figures/other-versions/Figure2_zoom145.jpg +0 -0
  381. package/documents/manuscripts/peerj-computerscience-2016/figures/other-versions/Figure2_zoom145.png +0 -0
  382. package/documents/manuscripts/peerj-computerscience-2016/figures/other-versions/Figure2_zoom145.psd +0 -0
  383. package/documents/manuscripts/peerj-computerscience-2016/figures/other-versions/Figure2_zoom145_900pix-wide.psd +0 -0
  384. package/documents/manuscripts/peerj-computerscience-2016/figures/other-versions/Figure5A.pdf +0 -0
  385. package/documents/manuscripts/peerj-computerscience-2016/figures/other-versions/Figure5B.pdf +0 -0
  386. package/documents/manuscripts/peerj-computerscience-2016/figures/other-versions/Figure5C.eps +0 -0
  387. package/documents/manuscripts/peerj-computerscience-2016/figures/other-versions/Figure5D.pdf +0 -0
  388. package/documents/manuscripts/peerj-computerscience-2016/figures/other-versions/Figure5E.pdf +0 -0
  389. package/documents/manuscripts/peerj-computerscience-2016/figures/other-versions/Figure5F.eps +0 -0
  390. package/documents/manuscripts/peerj-computerscience-2016/figures/other-versions/Figure5_compiled.png +0 -0
  391. package/documents/manuscripts/peerj-computerscience-2016/figures/submitted-versions/Figure3_GRNsight-Architecture.pdf +0 -0
  392. package/documents/manuscripts/peerj-computerscience-2016/figures/submitted-versions/Figure4_GRNsight-Screenshot.pdf +0 -0
  393. package/documents/manuscripts/peerj-computerscience-2016/figures/submitted-versions/Figure5_compiled.pdf +12 -5383
  394. package/documents/manuscripts/peerj-computerscience-2016/peerj-reviewing-10823-v0.pdf +0 -0
  395. package/documents/manuscripts/peerj-computerscience-2016/revisions/GRNsight_PeerJ-CS_conference-presentations_2016_revised.docx +0 -0
  396. package/documents/manuscripts/peerj-computerscience-2016/revisions/GRNsight_PeerJ-CS_cover-letter-and-response_2016.pdf +0 -0
  397. package/documents/manuscripts/peerj-computerscience-2016/revisions/GRNsight_PeerJ-CS_cover-letter_2016.docx +0 -0
  398. package/documents/manuscripts/peerj-computerscience-2016/revisions/GRNsight_PeerJ-CS_cover-letter_2016.pdf +0 -0
  399. package/documents/manuscripts/peerj-computerscience-2016/revisions/GRNsight_PeerJ-CS_manuscript_2016_Table1.docx +0 -0
  400. package/documents/manuscripts/peerj-computerscience-2016/revisions/GRNsight_PeerJ-CS_manuscript_2016_references_revised.rtf +0 -385
  401. package/documents/manuscripts/peerj-computerscience-2016/revisions/GRNsight_PeerJ-CS_manuscript_2016_text-only_revised.docx +0 -0
  402. package/documents/manuscripts/peerj-computerscience-2016/revisions/GRNsight_PeerJ-CS_manuscript_2016_text-only_revised_marked.docx +0 -0
  403. package/documents/manuscripts/peerj-computerscience-2016/revisions/GRNsight_PeerJ-CS_response-to-reviewers_2016.docx +0 -0
  404. package/documents/manuscripts/peerj-computerscience-2016/revisions/GRNsight_PeerJ-CS_response-to-reviewers_2016.pdf +0 -0
  405. package/documents/manuscripts/peerj-computerscience-2016/revisions/figures/Figure3_GRNsight-Architecture.pdf +0 -0
  406. package/documents/manuscripts/peerj-computerscience-2016/revisions/figures/Figure4_GRNsight-Screenshot-auto.pdf +0 -0
  407. package/documents/manuscripts/peerj-computerscience-2016/revisions/figures/Figure4_GRNsight-Screenshot.pdf +0 -0
  408. package/documents/manuscripts/peerj-computerscience-2016/revisions/peerj-reviewing-10823-v1.pdf +0 -0
  409. package/documents/posters/Anguiano_CMSI402_2017.pptx +0 -0
  410. package/documents/posters/Anguiano_Varshneya_LMU-Symposium_2015.pptx +0 -0
  411. package/documents/posters/Anguiano_Varshneya_SCCUR_2014.pptx +0 -0
  412. package/documents/posters/Choe_Shin_CMSI402_2018.pptx +0 -0
  413. package/documents/posters/Dahlquist-et-al_BOSC_ISMB_2016_poster.pptx +0 -0
  414. package/documents/posters/Lopez_Filler_LMU_Symposium_2019.pdf +0 -0
  415. package/documents/posters/Lopez_Filler_LMU_Symposium_2019.pptx +0 -0
  416. package/documents/posters/Samdarshi-et-al_LMU-Symposium_2017.pptx +0 -0
  417. package/documents/posters/Samdarshi-et-al_LMU-Symposium_2018.pptx +0 -0
  418. package/documents/posters/Samdarshi-et-al_SoCalSysBio_2019.pptx +0 -0
  419. package/documents/posters/Shin-et-al_SCCUR_2017.pptx +0 -0
  420. package/documents/posters/Southwick_CMSI402_2014.pptx +0 -0
  421. package/documents/posters/Varshneya_Samdarshi_LMU-Symposium_2016.pptx +0 -0
  422. package/documents/posters/Varshneya_Samdarshi_SoCalSysBio_2017.pptx +0 -0
  423. package/documents/presentations/Anguiano_402_Final_Presentation.pptx +0 -0
  424. package/documents/presentations/Choe_SWERapidFire2017_final.pptx +0 -0
  425. package/documents/presentations/Dahlquist_BOSC_20160709.pptx +0 -0
  426. package/documents/presentations/Dahlquist_ExperimentalBiology_20160404_talk.pptx +0 -0
  427. package/documents/presentations/Dahlquist_SoCalSysBio_20150131_talk.pptx +0 -0
  428. package/documents/presentations/Samdarshi_LMU-Symposium_20190323_talk.pdf +0 -0
  429. package/documents/presentations/Samdarshi_LMU-Symposium_20190323_talk.pptx +0 -0
  430. package/documents/presentations/Southwick_Anguiano_LMU-Symposium_20140329_talk.pptx +0 -0
  431. package/documents/presentations/Southwick_CMSI402_Presentation_20140508_talk.pptx +0 -0
  432. package/documents/presentations/Varshneya_Anguiano_LMU-Symposium_201703_talk.pptx +0 -0
  433. package/documents/reports/Samdarshi_Mihir_2019/Samdarshi_2019_Final.docx +0 -0
  434. package/documents/reports/Samdarshi_Mihir_2019/Samdarshi_Mihir_2019_AnnotatedBibliography.docx +0 -0
  435. package/documents/reports/Samdarshi_Mihir_2019/Samdarshi_Mihir_2019_Outline.docx +0 -0
  436. package/documents/reports/Samdarshi_Mihir_2019/~$mdarshi_2019_Draft.docx +0 -0
  437. package/documents/reports/Samdarshi_Mihir_2019/~$mdarshi_2019_Final_Paper_Draft.docx +0 -0
  438. package/documents/reports/Varshneya_Anu_2017/Varshneya-201701-AnnotatedBibliography.docx +0 -0
  439. package/documents/reports/Varshneya_Anu_2017/Varshneya-201702-Introduction.docx +0 -0
  440. package/documents/reports/Varshneya_Anu_2017/Varshneya-201702-Outline.docx +0 -0
  441. package/documents/reports/Varshneya_Anu_2017/Varshneya-201703-Discussion.docx +0 -0
  442. package/documents/reports/Varshneya_Anu_2017/Varshneya-201703-MMResults.docx +0 -0
  443. package/documents/reports/Varshneya_Anu_2017/Varshneya-201704-Draft-1.docx +0 -0
  444. package/documents/reports/Varshneya_Anu_2017/Varshneya-201704-Final.docx +0 -0
  445. package/onlysidebar.html +0 -8
  446. package/test/graph-library-tests.js +0 -165
  447. package/test-files/demo-files/21-genes_50-edges_Dahlquist-data_estimation_output.xlsx +0 -0
  448. package/test-files/demo-files/21-genes_50-edges_Dahlquist-data_input.xlsx +0 -0
  449. package/test-files/graph-tests/different-sized-networks/10-genes-max-edges.xlsx +0 -0
  450. package/test-files/graph-tests/different-sized-networks/12-genes-max-edges.xlsx +0 -0
  451. package/test-files/graph-tests/different-sized-networks/35-genes-max-edges.xlsx +0 -0
  452. package/test-files/graph-tests/different-sized-networks/40-genes-0-edges.xlsx +0 -0
  453. package/test-files/graph-tests/different-sized-networks/40-genes-max-edges.xlsx +0 -0
  454. package/test-files/graph-tests/different-sized-networks/42-genes-max-edges.xlsx +0 -0
  455. package/test-files/graph-tests/different-sized-networks/50-genes-max-edges.xlsx +0 -0
  456. package/test-files/graph-tests/different-sized-networks/75-genes-150-edges.xlsx +0 -0
  457. package/web-client/public/js/container.js +0 -121
  458. package/web-client/views/upload.jade +0 -464
@@ -1,1247 +1,1952 @@
1
1
  TN:
2
- SF:/Users/dondi/Documents/Main/Code/git/GRNsight/server/controllers/additional-sheet-parser.js
3
- FN:13,isExpressionSheet
4
- FN:14,(anonymous_1)
5
- FN:19,fillArray
6
- FN:26,parseMetaDataSheet
7
- FN:28,(anonymous_4)
8
- FN:38,parseTwoColumnSheet
9
- FN:40,(anonymous_6)
10
- FN:48,parseExpressionSheet
11
- FN:53,(anonymous_8)
12
- FN:69,(anonymous_9)
13
- FN:75,(anonymous_10)
14
- FNF:11
15
- FNH:11
16
- FNDA:35,isExpressionSheet
17
- FNDA:63,(anonymous_1)
18
- FNDA:7,fillArray
19
- FNDA:3,parseMetaDataSheet
20
- FNDA:48,(anonymous_4)
21
- FNDA:9,parseTwoColumnSheet
22
- FNDA:133,(anonymous_6)
23
- FNDA:28,parseExpressionSheet
24
- FNDA:407,(anonymous_8)
25
- FNDA:6,(anonymous_9)
26
- FNDA:47,(anonymous_10)
27
- DA:4,1
28
- DA:11,1
29
- DA:13,1
30
- DA:14,35
31
- DA:15,63
32
- DA:19,1
33
- DA:20,7
34
- DA:21,9
35
- DA:23,7
36
- DA:26,1
37
- DA:27,3
38
- DA:28,3
39
- DA:29,48
40
- DA:30,45
41
- DA:32,45
42
- DA:35,3
43
- DA:38,1
44
- DA:39,9
45
- DA:40,9
46
- DA:41,133
47
- DA:42,124
48
- DA:45,9
49
- DA:48,1
50
- DA:49,28
51
- DA:50,28
52
- DA:51,28
53
- DA:52,28
54
- DA:53,28
55
- DA:54,407
56
- DA:55,407
57
- DA:56,401
58
- DA:59,401
59
- DA:60,7
60
- DA:62,401
61
- DA:65,28
62
- DA:66,28
63
- DA:69,1
64
- DA:70,6
65
- DA:75,6
66
- DA:76,47
67
- DA:77,3
68
- DA:79,44
69
- DA:80,9
70
- DA:82,35
71
- DA:83,28
72
- DA:86,6
73
- LF:46
74
- LH:46
75
- BRDA:29,0,0,45
76
- BRDA:29,0,1,3
77
- BRDA:32,1,0,9
78
- BRDA:32,1,1,36
79
- BRDA:41,2,0,124
80
- BRDA:41,2,1,9
81
- BRDA:55,3,0,401
82
- BRDA:55,3,1,6
83
- BRDA:59,4,0,7
84
- BRDA:59,4,1,394
85
- BRDA:76,5,0,3
86
- BRDA:76,5,1,44
87
- BRDA:79,6,0,9
88
- BRDA:79,6,1,35
89
- BRDA:82,7,0,28
90
- BRDA:82,7,1,7
91
- BRF:16
92
- BRH:16
93
- end_of_record
94
- TN:
95
- SF:/Users/dondi/Documents/Main/Code/git/GRNsight/server/controllers/constants.js
96
- FNF:0
97
- FNH:0
98
- DA:1,1
99
- LF:1
100
- LH:1
101
- BRF:0
102
- BRH:0
103
- end_of_record
104
- TN:
105
- SF:/Users/dondi/Documents/Main/Code/git/GRNsight/server/controllers/export-controller.js
106
- FN:6,convertResponse
107
- FN:11,exportResponse
108
- FN:17,generalExportError
109
- FN:27,(anonymous_3)
110
- FN:31,(anonymous_4)
111
- FN:40,(anonymous_5)
112
- FN:49,(anonymous_6)
113
- FN:58,(anonymous_7)
114
- FNF:8
2
+ SF:/Users/dondi/Documents/Main/Code/git/GRNsight/server/controllers/spreadsheet-controller.js
3
+ FN:28,(anonymous_1)
4
+ FN:29,(anonymous_2)
5
+ FN:34,(anonymous_3)
6
+ FN:60,(anonymous_4)
7
+ FN:70,(anonymous_5)
8
+ FN:82,(anonymous_6)
9
+ FN:90,(anonymous_7)
10
+ FN:100,(anonymous_8)
11
+ FN:111,(anonymous_9)
12
+ FN:146,(anonymous_10)
13
+ FN:157,(anonymous_11)
14
+ FN:167,(anonymous_12)
15
+ FN:184,(anonymous_13)
16
+ FN:193,(anonymous_14)
17
+ FN:202,(anonymous_15)
18
+ FN:211,(anonymous_16)
19
+ FN:221,(anonymous_17)
20
+ FN:229,(anonymous_18)
21
+ FN:261,(anonymous_19)
22
+ FN:272,(anonymous_20)
23
+ FN:276,(anonymous_21)
24
+ FN:287,(anonymous_22)
25
+ FN:298,(anonymous_23)
26
+ FN:308,(anonymous_24)
27
+ FN:399,(anonymous_25)
28
+ FN:434,(anonymous_26)
29
+ FN:456,(anonymous_27)
30
+ FN:458,(anonymous_28)
31
+ FN:466,(anonymous_29)
32
+ FN:514,(anonymous_30)
33
+ FN:518,(anonymous_31)
34
+ FN:520,(anonymous_32)
35
+ FN:546,(anonymous_33)
36
+ FN:550,(anonymous_34)
37
+ FN:555,(anonymous_35)
38
+ FN:559,(anonymous_36)
39
+ FNF:36
115
40
  FNH:1
116
- FNDA:0,convertResponse
117
- FNDA:0,exportResponse
118
- FNDA:0,generalExportError
119
- FNDA:1,(anonymous_3)
41
+ FNDA:0,(anonymous_1)
42
+ FNDA:0,(anonymous_2)
43
+ FNDA:0,(anonymous_3)
120
44
  FNDA:0,(anonymous_4)
121
45
  FNDA:0,(anonymous_5)
122
46
  FNDA:0,(anonymous_6)
123
47
  FNDA:0,(anonymous_7)
48
+ FNDA:0,(anonymous_8)
49
+ FNDA:0,(anonymous_9)
50
+ FNDA:0,(anonymous_10)
51
+ FNDA:0,(anonymous_11)
52
+ FNDA:0,(anonymous_12)
53
+ FNDA:0,(anonymous_13)
54
+ FNDA:0,(anonymous_14)
55
+ FNDA:0,(anonymous_15)
56
+ FNDA:0,(anonymous_16)
57
+ FNDA:0,(anonymous_17)
58
+ FNDA:0,(anonymous_18)
59
+ FNDA:0,(anonymous_19)
60
+ FNDA:0,(anonymous_20)
61
+ FNDA:0,(anonymous_21)
62
+ FNDA:0,(anonymous_22)
63
+ FNDA:0,(anonymous_23)
64
+ FNDA:0,(anonymous_24)
65
+ FNDA:0,(anonymous_25)
66
+ FNDA:0,(anonymous_26)
67
+ FNDA:0,(anonymous_27)
68
+ FNDA:0,(anonymous_28)
69
+ FNDA:0,(anonymous_29)
70
+ FNDA:2,(anonymous_30)
71
+ FNDA:0,(anonymous_31)
72
+ FNDA:0,(anonymous_32)
73
+ FNDA:0,(anonymous_33)
74
+ FNDA:0,(anonymous_34)
75
+ FNDA:0,(anonymous_35)
76
+ FNDA:0,(anonymous_36)
124
77
  DA:1,1
78
+ DA:2,1
125
79
  DA:3,1
126
80
  DA:4,1
81
+ DA:5,1
127
82
  DA:6,1
128
- DA:7,0
129
- DA:8,0
130
- DA:11,1
131
- DA:12,0
132
- DA:13,0
133
- DA:14,0
134
- DA:17,1
135
- DA:18,0
136
- DA:27,1
83
+ DA:7,1
84
+ DA:10,1
85
+ DA:13,1
86
+ DA:21,1
87
+ DA:23,1
88
+ DA:26,1
137
89
  DA:28,1
138
- DA:31,0
139
- DA:32,0
140
- DA:33,0
141
- DA:34,0
90
+ DA:29,0
91
+ DA:30,0
92
+ DA:34,1
93
+ DA:35,0
142
94
  DA:36,0
95
+ DA:37,0
143
96
  DA:40,0
144
97
  DA:41,0
145
98
  DA:42,0
146
- DA:43,0
147
99
  DA:45,0
148
- DA:49,0
149
- DA:50,0
150
- DA:51,0
151
- DA:52,0
152
- DA:54,0
153
- DA:58,0
154
- DA:59,0
155
- DA:60,0
100
+ DA:51,1
156
101
  DA:61,0
102
+ DA:62,0
157
103
  DA:63,0
158
- DA:68,1
159
- LF:35
160
- LH:9
161
- BRDA:28,0,0,0
162
- BRDA:28,0,1,1
163
- BRF:2
104
+ DA:71,0
105
+ DA:72,0
106
+ DA:73,0
107
+ DA:83,0
108
+ DA:91,0
109
+ DA:92,0
110
+ DA:93,0
111
+ DA:101,0
112
+ DA:102,0
113
+ DA:112,0
114
+ DA:113,0
115
+ DA:114,0
116
+ DA:147,0
117
+ DA:158,0
118
+ DA:168,0
119
+ DA:183,1
120
+ DA:185,0
121
+ DA:186,0
122
+ DA:187,0
123
+ DA:194,0
124
+ DA:195,0
125
+ DA:196,0
126
+ DA:203,0
127
+ DA:204,0
128
+ DA:205,0
129
+ DA:212,0
130
+ DA:213,0
131
+ DA:214,0
132
+ DA:222,0
133
+ DA:223,0
134
+ DA:230,0
135
+ DA:262,0
136
+ DA:272,1
137
+ DA:273,0
138
+ DA:276,1
139
+ DA:277,0
140
+ DA:278,0
141
+ DA:279,0
142
+ DA:280,0
143
+ DA:282,0
144
+ DA:283,0
145
+ DA:287,1
146
+ DA:288,0
147
+ DA:289,0
148
+ DA:290,0
149
+ DA:291,0
150
+ DA:293,0
151
+ DA:294,0
152
+ DA:298,1
153
+ DA:299,0
154
+ DA:300,0
155
+ DA:301,0
156
+ DA:302,0
157
+ DA:305,0
158
+ DA:308,1
159
+ DA:309,0
160
+ DA:313,0
161
+ DA:315,0
162
+ DA:318,0
163
+ DA:319,0
164
+ DA:320,0
165
+ DA:323,0
166
+ DA:324,0
167
+ DA:328,0
168
+ DA:330,0
169
+ DA:331,0
170
+ DA:334,0
171
+ DA:335,0
172
+ DA:339,0
173
+ DA:341,0
174
+ DA:342,0
175
+ DA:345,0
176
+ DA:346,0
177
+ DA:350,0
178
+ DA:352,0
179
+ DA:353,0
180
+ DA:355,0
181
+ DA:362,0
182
+ DA:363,0
183
+ DA:364,0
184
+ DA:365,0
185
+ DA:367,0
186
+ DA:368,0
187
+ DA:369,0
188
+ DA:373,0
189
+ DA:374,0
190
+ DA:375,0
191
+ DA:376,0
192
+ DA:379,0
193
+ DA:380,0
194
+ DA:381,0
195
+ DA:385,0
196
+ DA:386,0
197
+ DA:387,0
198
+ DA:388,0
199
+ DA:391,0
200
+ DA:392,0
201
+ DA:393,0
202
+ DA:399,0
203
+ DA:400,0
204
+ DA:401,0
205
+ DA:402,0
206
+ DA:403,0
207
+ DA:405,0
208
+ DA:406,0
209
+ DA:407,0
210
+ DA:409,0
211
+ DA:410,0
212
+ DA:411,0
213
+ DA:412,0
214
+ DA:413,0
215
+ DA:417,0
216
+ DA:418,0
217
+ DA:420,0
218
+ DA:421,0
219
+ DA:428,0
220
+ DA:429,0
221
+ DA:430,0
222
+ DA:431,0
223
+ DA:434,1
224
+ DA:435,0
225
+ DA:437,0
226
+ DA:439,0
227
+ DA:440,0
228
+ DA:442,0
229
+ DA:445,0
230
+ DA:447,0
231
+ DA:449,0
232
+ DA:456,1
233
+ DA:457,0
234
+ DA:458,0
235
+ DA:459,0
236
+ DA:466,0
237
+ DA:467,0
238
+ DA:468,0
239
+ DA:469,0
240
+ DA:478,0
241
+ DA:514,1
242
+ DA:515,2
243
+ DA:518,0
244
+ DA:520,0
245
+ DA:521,0
246
+ DA:522,0
247
+ DA:524,0
248
+ DA:525,0
249
+ DA:526,0
250
+ DA:528,0
251
+ DA:531,0
252
+ DA:532,0
253
+ DA:541,0
254
+ DA:546,0
255
+ DA:547,0
256
+ DA:550,0
257
+ DA:551,0
258
+ DA:555,0
259
+ DA:556,0
260
+ DA:559,0
261
+ DA:560,0
262
+ DA:566,2
263
+ LF:186
264
+ LH:26
265
+ BRDA:36,1,0,0
266
+ BRDA:36,1,1,0
267
+ BRDA:41,2,0,0
268
+ BRDA:41,2,1,0
269
+ BRDA:279,3,0,0
270
+ BRDA:279,3,1,0
271
+ BRDA:290,4,0,0
272
+ BRDA:290,4,1,0
273
+ BRDA:301,5,0,0
274
+ BRDA:301,5,1,0
275
+ BRDA:318,6,0,0
276
+ BRDA:318,6,1,0
277
+ BRDA:318,7,0,0
278
+ BRDA:318,7,1,0
279
+ BRDA:319,8,0,0
280
+ BRDA:319,8,1,0
281
+ BRDA:323,9,0,0
282
+ BRDA:323,9,1,0
283
+ BRDA:328,10,0,0
284
+ BRDA:328,10,1,0
285
+ BRDA:328,11,0,0
286
+ BRDA:328,11,1,0
287
+ BRDA:339,12,0,0
288
+ BRDA:339,12,1,0
289
+ BRDA:339,13,0,0
290
+ BRDA:339,13,1,0
291
+ BRDA:341,14,0,0
292
+ BRDA:341,14,1,0
293
+ BRDA:345,15,0,0
294
+ BRDA:345,15,1,0
295
+ BRDA:350,16,0,0
296
+ BRDA:350,16,1,0
297
+ BRDA:350,17,0,0
298
+ BRDA:350,17,1,0
299
+ BRDA:353,18,0,0
300
+ BRDA:353,18,1,0
301
+ BRDA:353,19,0,0
302
+ BRDA:353,19,1,0
303
+ BRDA:362,20,0,0
304
+ BRDA:362,20,1,0
305
+ BRDA:363,21,0,0
306
+ BRDA:363,21,1,0
307
+ BRDA:367,22,0,0
308
+ BRDA:367,22,1,0
309
+ BRDA:373,23,0,0
310
+ BRDA:373,23,1,0
311
+ BRDA:373,24,0,0
312
+ BRDA:373,24,1,0
313
+ BRDA:374,25,0,0
314
+ BRDA:374,25,1,0
315
+ BRDA:379,26,0,0
316
+ BRDA:379,26,1,0
317
+ BRDA:385,27,0,0
318
+ BRDA:385,27,1,0
319
+ BRDA:385,28,0,0
320
+ BRDA:385,28,1,0
321
+ BRDA:385,28,2,0
322
+ BRDA:386,29,0,0
323
+ BRDA:386,29,1,0
324
+ BRDA:391,30,0,0
325
+ BRDA:391,30,1,0
326
+ BRDA:400,31,0,0
327
+ BRDA:400,31,1,0
328
+ BRDA:409,32,0,0
329
+ BRDA:409,32,1,0
330
+ BRDA:409,33,0,0
331
+ BRDA:409,33,1,0
332
+ BRDA:411,34,0,0
333
+ BRDA:411,34,1,0
334
+ BRDA:417,35,0,0
335
+ BRDA:417,35,1,0
336
+ BRDA:420,36,0,0
337
+ BRDA:420,36,1,0
338
+ BRDA:449,37,0,0
339
+ BRDA:449,37,1,0
340
+ BRDA:515,38,0,0
341
+ BRDA:515,38,1,2
342
+ BRDA:521,39,0,0
343
+ BRDA:521,39,1,0
344
+ BRDA:531,40,0,0
345
+ BRDA:531,40,1,0
346
+ BRF:81
164
347
  BRH:1
165
348
  end_of_record
166
349
  TN:
167
- SF:/Users/dondi/Documents/Main/Code/git/GRNsight/server/controllers/graphml-constants.js
168
- FN:18,GRAPHML_GENERAL_SYNTAX_ERROR
169
- FN:29,GRAPHML_INVALID_ATTRIBUTE_NAME
170
- FN:41,GRAPHML_UNMATCHED_CLOSE_TAG
171
- FN:54,GRAPHML_MISSING_CLOSE_TAG_AFTER_FORWARD_SLASH
172
- FN:65,GRAPHML_UNFINISHED_CLOSING_TAG
173
- FN:77,GRAPHML_MISSING_GRAPHML_CLOSE_TAG
174
- FN:85,GRAPHML_UNPAIRED_QUOTE
175
- FN:97,GRAPHML_INVALID_CHARACTER_IN_NAME
176
- FN:109,GRAPHML_UNENCODED_TAG
177
- FN:121,GRAPHML_INCOMPLETE_CLOSING_TAG
178
- FN:134,GRAPHML_MISSING_OPEN_QUOTE
179
- FN:161,pairError
180
- FNF:12
181
- FNH:11
182
- FNDA:0,GRAPHML_GENERAL_SYNTAX_ERROR
183
- FNDA:4,GRAPHML_INVALID_ATTRIBUTE_NAME
184
- FNDA:4,GRAPHML_UNMATCHED_CLOSE_TAG
185
- FNDA:2,GRAPHML_MISSING_CLOSE_TAG_AFTER_FORWARD_SLASH
186
- FNDA:2,GRAPHML_UNFINISHED_CLOSING_TAG
187
- FNDA:4,GRAPHML_MISSING_GRAPHML_CLOSE_TAG
188
- FNDA:2,GRAPHML_UNPAIRED_QUOTE
189
- FNDA:2,GRAPHML_INVALID_CHARACTER_IN_NAME
190
- FNDA:2,GRAPHML_UNENCODED_TAG
191
- FNDA:2,GRAPHML_INCOMPLETE_CLOSING_TAG
192
- FNDA:2,GRAPHML_MISSING_OPEN_QUOTE
193
- FNDA:26,pairError
194
- DA:1,1
195
- DA:17,1
350
+ SF:/Users/dondi/Documents/Main/Code/git/GRNsight/server/controllers/additional-sheet-parser.js
351
+ FN:44,(anonymous_1)
352
+ FN:52,(anonymous_2)
353
+ FN:62,(anonymous_3)
354
+ FN:81,(anonymous_4)
355
+ FN:89,(anonymous_5)
356
+ FN:99,(anonymous_6)
357
+ FN:107,(anonymous_7)
358
+ FN:119,(anonymous_8)
359
+ FN:127,(anonymous_9)
360
+ FN:135,(anonymous_10)
361
+ FN:147,(anonymous_11)
362
+ FN:155,(anonymous_12)
363
+ FN:162,(anonymous_13)
364
+ FN:171,(anonymous_14)
365
+ FN:180,(anonymous_15)
366
+ FN:189,(anonymous_16)
367
+ FN:270,(anonymous_17)
368
+ FN:447,(anonymous_18)
369
+ FN:457,(anonymous_19)
370
+ FNF:19
371
+ FNH:0
372
+ FNDA:0,(anonymous_1)
373
+ FNDA:0,(anonymous_2)
374
+ FNDA:0,(anonymous_3)
375
+ FNDA:0,(anonymous_4)
376
+ FNDA:0,(anonymous_5)
377
+ FNDA:0,(anonymous_6)
378
+ FNDA:0,(anonymous_7)
379
+ FNDA:0,(anonymous_8)
380
+ FNDA:0,(anonymous_9)
381
+ FNDA:0,(anonymous_10)
382
+ FNDA:0,(anonymous_11)
383
+ FNDA:0,(anonymous_12)
384
+ FNDA:0,(anonymous_13)
385
+ FNDA:0,(anonymous_14)
386
+ FNDA:0,(anonymous_15)
387
+ FNDA:0,(anonymous_16)
388
+ FNDA:0,(anonymous_17)
389
+ FNDA:0,(anonymous_18)
390
+ FNDA:0,(anonymous_19)
391
+ DA:4,1
392
+ DA:12,1
393
+ DA:13,0
394
+ DA:14,0
395
+ DA:15,0
396
+ DA:16,0
397
+ DA:17,0
398
+ DA:18,0
196
399
  DA:19,0
197
- DA:30,4
198
- DA:42,4
199
- DA:55,2
200
- DA:66,2
201
- DA:78,4
202
- DA:86,2
203
- DA:98,2
204
- DA:110,2
205
- DA:122,2
206
- DA:135,2
207
- DA:148,1
208
- DA:161,1
209
- DA:162,26
210
- DA:167,1
211
- LF:17
212
- LH:16
213
- BRDA:163,0,0,26
214
- BRDA:163,0,1,0
215
- BRF:2
216
- BRH:1
400
+ DA:20,0
401
+ DA:21,0
402
+ DA:22,0
403
+ DA:23,0
404
+ DA:30,1
405
+ DA:37,1
406
+ DA:39,1
407
+ DA:43,1
408
+ DA:45,0
409
+ DA:53,0
410
+ DA:54,0
411
+ DA:55,0
412
+ DA:63,0
413
+ DA:64,0
414
+ DA:65,0
415
+ DA:82,0
416
+ DA:90,0
417
+ DA:91,0
418
+ DA:92,0
419
+ DA:100,0
420
+ DA:108,0
421
+ DA:118,1
422
+ DA:120,0
423
+ DA:121,0
424
+ DA:128,0
425
+ DA:136,0
426
+ DA:137,0
427
+ DA:138,0
428
+ DA:140,0
429
+ DA:148,0
430
+ DA:156,0
431
+ DA:163,0
432
+ DA:164,0
433
+ DA:172,0
434
+ DA:173,0
435
+ DA:174,0
436
+ DA:181,0
437
+ DA:182,0
438
+ DA:183,0
439
+ DA:190,0
440
+ DA:191,0
441
+ DA:192,0
442
+ DA:201,1
443
+ DA:202,0
444
+ DA:203,0
445
+ DA:204,0
446
+ DA:205,0
447
+ DA:207,0
448
+ DA:209,0
449
+ DA:210,0
450
+ DA:211,0
451
+ DA:213,0
452
+ DA:214,0
453
+ DA:218,1
454
+ DA:219,0
455
+ DA:220,0
456
+ DA:221,0
457
+ DA:222,0
458
+ DA:224,0
459
+ DA:225,0
460
+ DA:229,1
461
+ DA:237,1
462
+ DA:238,0
463
+ DA:239,0
464
+ DA:240,0
465
+ DA:241,0
466
+ DA:242,0
467
+ DA:243,0
468
+ DA:244,0
469
+ DA:245,0
470
+ DA:246,0
471
+ DA:247,0
472
+ DA:248,0
473
+ DA:250,0
474
+ DA:253,1
475
+ DA:254,0
476
+ DA:259,0
477
+ DA:260,0
478
+ DA:261,0
479
+ DA:262,0
480
+ DA:264,0
481
+ DA:265,0
482
+ DA:266,0
483
+ DA:267,0
484
+ DA:270,0
485
+ DA:271,0
486
+ DA:272,0
487
+ DA:274,0
488
+ DA:277,0
489
+ DA:278,0
490
+ DA:279,0
491
+ DA:280,0
492
+ DA:281,0
493
+ DA:283,0
494
+ DA:285,0
495
+ DA:286,0
496
+ DA:287,0
497
+ DA:289,0
498
+ DA:290,0
499
+ DA:295,0
500
+ DA:298,1
501
+ DA:299,0
502
+ DA:310,0
503
+ DA:311,0
504
+ DA:312,0
505
+ DA:313,0
506
+ DA:315,0
507
+ DA:316,0
508
+ DA:317,0
509
+ DA:319,0
510
+ DA:320,0
511
+ DA:324,0
512
+ DA:325,0
513
+ DA:329,0
514
+ DA:331,0
515
+ DA:332,0
516
+ DA:333,0
517
+ DA:334,0
518
+ DA:335,0
519
+ DA:337,0
520
+ DA:338,0
521
+ DA:341,0
522
+ DA:342,0
523
+ DA:344,0
524
+ DA:345,0
525
+ DA:346,0
526
+ DA:347,0
527
+ DA:349,0
528
+ DA:350,0
529
+ DA:351,0
530
+ DA:353,0
531
+ DA:355,0
532
+ DA:358,0
533
+ DA:359,0
534
+ DA:362,0
535
+ DA:363,0
536
+ DA:364,0
537
+ DA:366,0
538
+ DA:367,0
539
+ DA:368,0
540
+ DA:372,0
541
+ DA:374,0
542
+ DA:376,0
543
+ DA:377,0
544
+ DA:378,0
545
+ DA:380,0
546
+ DA:382,0
547
+ DA:383,0
548
+ DA:384,0
549
+ DA:385,0
550
+ DA:386,0
551
+ DA:387,0
552
+ DA:389,0
553
+ DA:392,0
554
+ DA:393,0
555
+ DA:395,0
556
+ DA:398,0
557
+ DA:401,1
558
+ DA:402,0
559
+ DA:408,0
560
+ DA:409,0
561
+ DA:413,0
562
+ DA:414,0
563
+ DA:415,0
564
+ DA:417,0
565
+ DA:418,0
566
+ DA:419,0
567
+ DA:420,0
568
+ DA:423,0
569
+ DA:424,0
570
+ DA:425,0
571
+ DA:428,0
572
+ DA:431,0
573
+ DA:432,0
574
+ DA:434,0
575
+ DA:435,0
576
+ DA:436,0
577
+ DA:438,0
578
+ DA:444,0
579
+ DA:447,1
580
+ DA:448,0
581
+ DA:457,0
582
+ DA:458,0
583
+ DA:459,0
584
+ DA:462,0
585
+ DA:463,0
586
+ DA:464,0
587
+ DA:465,0
588
+ DA:468,0
589
+ LF:198
590
+ LH:15
591
+ BRDA:13,1,0,0
592
+ BRDA:13,1,1,0
593
+ BRDA:14,2,0,0
594
+ BRDA:14,2,1,0
595
+ BRDA:14,3,0,0
596
+ BRDA:14,3,1,0
597
+ BRDA:16,4,0,0
598
+ BRDA:16,4,1,0
599
+ BRDA:18,5,0,0
600
+ BRDA:18,5,1,0
601
+ BRDA:18,6,0,0
602
+ BRDA:18,6,1,0
603
+ BRDA:20,7,0,0
604
+ BRDA:20,7,1,0
605
+ BRDA:21,8,0,0
606
+ BRDA:21,8,1,0
607
+ BRDA:22,9,0,0
608
+ BRDA:22,9,1,0
609
+ BRDA:23,10,0,0
610
+ BRDA:23,10,1,0
611
+ BRDA:137,11,0,0
612
+ BRDA:137,11,1,0
613
+ BRDA:203,12,0,0
614
+ BRDA:203,12,1,0
615
+ BRDA:210,13,0,0
616
+ BRDA:210,13,1,0
617
+ BRDA:221,14,0,0
618
+ BRDA:221,14,1,0
619
+ BRDA:240,15,0,0
620
+ BRDA:240,15,1,0
621
+ BRDA:243,16,0,0
622
+ BRDA:243,16,1,0
623
+ BRDA:246,17,0,0
624
+ BRDA:246,17,1,0
625
+ BRDA:259,18,0,0
626
+ BRDA:259,18,1,0
627
+ BRDA:261,19,0,0
628
+ BRDA:261,19,1,0
629
+ BRDA:264,20,0,0
630
+ BRDA:264,20,1,0
631
+ BRDA:266,21,0,0
632
+ BRDA:266,21,1,0
633
+ BRDA:271,22,0,0
634
+ BRDA:271,22,1,0
635
+ BRDA:274,23,0,0
636
+ BRDA:274,23,1,0
637
+ BRDA:278,24,0,0
638
+ BRDA:278,24,1,0
639
+ BRDA:280,25,0,0
640
+ BRDA:280,25,1,0
641
+ BRDA:281,26,0,0
642
+ BRDA:281,26,1,0
643
+ BRDA:281,27,0,0
644
+ BRDA:281,27,1,0
645
+ BRDA:285,28,0,0
646
+ BRDA:285,28,1,0
647
+ BRDA:287,29,0,0
648
+ BRDA:287,29,1,0
649
+ BRDA:315,30,0,0
650
+ BRDA:315,30,1,0
651
+ BRDA:316,31,0,0
652
+ BRDA:316,31,1,0
653
+ BRDA:319,32,0,0
654
+ BRDA:319,32,1,0
655
+ BRDA:334,33,0,0
656
+ BRDA:334,33,1,0
657
+ BRDA:334,34,0,0
658
+ BRDA:334,34,1,0
659
+ BRDA:335,35,0,0
660
+ BRDA:335,35,1,0
661
+ BRDA:335,36,0,0
662
+ BRDA:335,36,1,0
663
+ BRDA:341,37,0,0
664
+ BRDA:341,37,1,0
665
+ BRDA:344,38,0,0
666
+ BRDA:344,38,1,0
667
+ BRDA:345,39,0,0
668
+ BRDA:345,39,1,0
669
+ BRDA:350,40,0,0
670
+ BRDA:350,40,1,0
671
+ BRDA:358,41,0,0
672
+ BRDA:358,41,1,0
673
+ BRDA:362,42,0,0
674
+ BRDA:362,42,1,0
675
+ BRDA:363,43,0,0
676
+ BRDA:363,43,1,0
677
+ BRDA:367,44,0,0
678
+ BRDA:367,44,1,0
679
+ BRDA:377,45,0,0
680
+ BRDA:377,45,1,0
681
+ BRDA:382,46,0,0
682
+ BRDA:382,46,1,0
683
+ BRDA:384,47,0,0
684
+ BRDA:384,47,1,0
685
+ BRDA:386,48,0,0
686
+ BRDA:386,48,1,0
687
+ BRDA:414,49,0,0
688
+ BRDA:414,49,1,0
689
+ BRDA:417,50,0,0
690
+ BRDA:417,50,1,0
691
+ BRDA:418,51,0,0
692
+ BRDA:418,51,1,0
693
+ BRDA:419,52,0,0
694
+ BRDA:419,52,1,0
695
+ BRDA:423,53,0,0
696
+ BRDA:423,53,1,0
697
+ BRDA:424,54,0,0
698
+ BRDA:424,54,1,0
699
+ BRDA:434,55,0,0
700
+ BRDA:434,55,1,0
701
+ BRDA:435,56,0,0
702
+ BRDA:435,56,1,0
703
+ BRDA:458,57,0,0
704
+ BRDA:458,57,1,0
705
+ BRDA:462,58,0,0
706
+ BRDA:462,58,1,0
707
+ BRDA:464,59,0,0
708
+ BRDA:464,59,1,0
709
+ BRF:118
710
+ BRH:0
217
711
  end_of_record
218
712
  TN:
219
- SF:/Users/dondi/Documents/Main/Code/git/GRNsight/server/controllers/helpers.js
220
- FN:5,attachCorsHeader
221
- FN:9,attachFileHeaders
222
- FNF:2
713
+ SF:/Users/dondi/Documents/Main/Code/git/GRNsight/server/controllers/expression-sheet-parser.js
714
+ FN:16,(anonymous_1)
715
+ FN:23,(anonymous_2)
716
+ FN:30,(anonymous_3)
717
+ FN:37,(anonymous_4)
718
+ FN:46,(anonymous_5)
719
+ FN:55,(anonymous_6)
720
+ FN:65,(anonymous_7)
721
+ FN:79,(anonymous_8)
722
+ FN:89,(anonymous_9)
723
+ FN:134,(anonymous_10)
724
+ FN:140,(anonymous_11)
725
+ FN:172,(anonymous_12)
726
+ FN:195,(anonymous_13)
727
+ FN:241,(anonymous_14)
728
+ FN:249,(anonymous_15)
729
+ FNF:15
223
730
  FNH:0
224
- FNDA:0,attachCorsHeader
225
- FNDA:0,attachFileHeaders
226
- DA:1,1
227
- DA:3,1
228
- DA:6,0
229
- DA:10,0
230
- DA:11,0
231
- DA:12,0
232
- LF:6
233
- LH:2
234
- BRF:0
731
+ FNDA:0,(anonymous_1)
732
+ FNDA:0,(anonymous_2)
733
+ FNDA:0,(anonymous_3)
734
+ FNDA:0,(anonymous_4)
735
+ FNDA:0,(anonymous_5)
736
+ FNDA:0,(anonymous_6)
737
+ FNDA:0,(anonymous_7)
738
+ FNDA:0,(anonymous_8)
739
+ FNDA:0,(anonymous_9)
740
+ FNDA:0,(anonymous_10)
741
+ FNDA:0,(anonymous_11)
742
+ FNDA:0,(anonymous_12)
743
+ FNDA:0,(anonymous_13)
744
+ FNDA:0,(anonymous_14)
745
+ FNDA:0,(anonymous_15)
746
+ DA:4,1
747
+ DA:6,1
748
+ DA:15,1
749
+ DA:17,0
750
+ DA:24,0
751
+ DA:31,0
752
+ DA:38,0
753
+ DA:39,0
754
+ DA:47,0
755
+ DA:48,0
756
+ DA:56,0
757
+ DA:57,0
758
+ DA:66,0
759
+ DA:67,0
760
+ DA:78,1
761
+ DA:80,0
762
+ DA:90,0
763
+ DA:98,1
764
+ DA:99,0
765
+ DA:100,0
766
+ DA:101,0
767
+ DA:102,0
768
+ DA:104,0
769
+ DA:106,0
770
+ DA:107,0
771
+ DA:108,0
772
+ DA:110,0
773
+ DA:111,0
774
+ DA:115,1
775
+ DA:116,0
776
+ DA:117,0
777
+ DA:118,0
778
+ DA:119,0
779
+ DA:121,0
780
+ DA:122,0
781
+ DA:126,1
782
+ DA:127,0
783
+ DA:128,0
784
+ DA:130,0
785
+ DA:133,1
786
+ DA:134,0
787
+ DA:135,0
788
+ DA:140,1
789
+ DA:142,0
790
+ DA:143,0
791
+ DA:151,0
792
+ DA:152,0
793
+ DA:153,0
794
+ DA:155,0
795
+ DA:156,0
796
+ DA:157,0
797
+ DA:158,0
798
+ DA:159,0
799
+ DA:160,0
800
+ DA:161,0
801
+ DA:162,0
802
+ DA:163,0
803
+ DA:164,0
804
+ DA:165,0
805
+ DA:167,0
806
+ DA:171,0
807
+ DA:172,0
808
+ DA:174,0
809
+ DA:175,0
810
+ DA:176,0
811
+ DA:177,0
812
+ DA:180,0
813
+ DA:181,0
814
+ DA:183,0
815
+ DA:186,0
816
+ DA:187,0
817
+ DA:188,0
818
+ DA:189,0
819
+ DA:192,0
820
+ DA:193,0
821
+ DA:194,0
822
+ DA:195,0
823
+ DA:196,0
824
+ DA:197,0
825
+ DA:200,0
826
+ DA:201,0
827
+ DA:202,0
828
+ DA:203,0
829
+ DA:207,0
830
+ DA:208,0
831
+ DA:209,0
832
+ DA:214,0
833
+ DA:216,0
834
+ DA:217,0
835
+ DA:218,0
836
+ DA:219,0
837
+ DA:220,0
838
+ DA:223,0
839
+ DA:224,0
840
+ DA:228,0
841
+ DA:231,0
842
+ DA:232,0
843
+ DA:233,0
844
+ DA:238,0
845
+ DA:241,1
846
+ DA:242,0
847
+ DA:247,0
848
+ DA:249,0
849
+ DA:250,0
850
+ DA:251,0
851
+ DA:252,0
852
+ DA:256,0
853
+ DA:257,0
854
+ DA:259,0
855
+ LF:109
856
+ LH:10
857
+ BRDA:100,1,0,0
858
+ BRDA:100,1,1,0
859
+ BRDA:107,2,0,0
860
+ BRDA:107,2,1,0
861
+ BRDA:118,3,0,0
862
+ BRDA:118,3,1,0
863
+ BRDA:152,4,0,0
864
+ BRDA:152,4,1,0
865
+ BRDA:159,5,0,0
866
+ BRDA:159,5,1,0
867
+ BRDA:159,6,0,0
868
+ BRDA:159,6,1,0
869
+ BRDA:161,7,0,0
870
+ BRDA:161,7,1,0
871
+ BRDA:163,8,0,0
872
+ BRDA:163,8,1,0
873
+ BRDA:175,9,0,0
874
+ BRDA:175,9,1,0
875
+ BRDA:180,10,0,0
876
+ BRDA:180,10,1,0
877
+ BRDA:189,11,0,0
878
+ BRDA:189,11,1,0
879
+ BRDA:196,12,0,0
880
+ BRDA:196,12,1,0
881
+ BRDA:200,13,0,0
882
+ BRDA:200,13,1,0
883
+ BRDA:202,14,0,0
884
+ BRDA:202,14,1,0
885
+ BRDA:208,15,0,0
886
+ BRDA:208,15,1,0
887
+ BRDA:217,16,0,0
888
+ BRDA:217,16,1,0
889
+ BRDA:218,17,0,0
890
+ BRDA:218,17,1,0
891
+ BRDA:223,18,0,0
892
+ BRDA:223,18,1,0
893
+ BRDA:232,19,0,0
894
+ BRDA:232,19,1,0
895
+ BRDA:250,20,0,0
896
+ BRDA:250,20,1,0
897
+ BRDA:256,21,0,0
898
+ BRDA:256,21,1,0
899
+ BRF:42
235
900
  BRH:0
236
901
  end_of_record
237
902
  TN:
238
- SF:/Users/dondi/Documents/Main/Code/git/GRNsight/server/controllers/import-controller.js
239
- FN:6,(anonymous_0)
240
- FN:12,performUpload
241
- FN:15,(anonymous_2)
242
- FN:31,(anonymous_3)
243
- FN:43,(anonymous_4)
244
- FN:47,(anonymous_5)
245
- FNF:6
246
- FNH:1
247
- FNDA:2,(anonymous_0)
248
- FNDA:0,performUpload
903
+ SF:/Users/dondi/Documents/Main/Code/git/GRNsight/server/controllers/workbook-sheet-parser.js
904
+ FN:38,(anonymous_1)
905
+ FN:48,(anonymous_2)
906
+ FN:60,(anonymous_3)
907
+ FN:68,(anonymous_4)
908
+ FN:78,(anonymous_5)
909
+ FN:89,(anonymous_6)
910
+ FN:98,(anonymous_7)
911
+ FN:106,(anonymous_8)
912
+ FN:114,(anonymous_9)
913
+ FN:123,(anonymous_10)
914
+ FN:164,(anonymous_11)
915
+ FN:171,(anonymous_12)
916
+ FN:180,(anonymous_13)
917
+ FN:189,(anonymous_14)
918
+ FN:198,(anonymous_15)
919
+ FN:208,(anonymous_16)
920
+ FN:240,(anonymous_17)
921
+ FN:251,(anonymous_18)
922
+ FN:255,(anonymous_19)
923
+ FN:266,(anonymous_20)
924
+ FN:277,(anonymous_21)
925
+ FN:292,(anonymous_22)
926
+ FN:313,(anonymous_23)
927
+ FN:507,(anonymous_24)
928
+ FNF:24
929
+ FNH:0
930
+ FNDA:0,(anonymous_1)
249
931
  FNDA:0,(anonymous_2)
250
932
  FNDA:0,(anonymous_3)
251
933
  FNDA:0,(anonymous_4)
252
934
  FNDA:0,(anonymous_5)
935
+ FNDA:0,(anonymous_6)
936
+ FNDA:0,(anonymous_7)
937
+ FNDA:0,(anonymous_8)
938
+ FNDA:0,(anonymous_9)
939
+ FNDA:0,(anonymous_10)
940
+ FNDA:0,(anonymous_11)
941
+ FNDA:0,(anonymous_12)
942
+ FNDA:0,(anonymous_13)
943
+ FNDA:0,(anonymous_14)
944
+ FNDA:0,(anonymous_15)
945
+ FNDA:0,(anonymous_16)
946
+ FNDA:0,(anonymous_17)
947
+ FNDA:0,(anonymous_18)
948
+ FNDA:0,(anonymous_19)
949
+ FNDA:0,(anonymous_20)
950
+ FNDA:0,(anonymous_21)
951
+ FNDA:0,(anonymous_22)
952
+ FNDA:0,(anonymous_23)
953
+ FNDA:0,(anonymous_24)
954
+ DA:5,1
955
+ DA:7,1
956
+ DA:18,1
957
+ DA:29,1
958
+ DA:39,0
959
+ DA:40,0
960
+ DA:41,0
961
+ DA:49,0
962
+ DA:50,0
963
+ DA:51,0
964
+ DA:61,0
965
+ DA:69,0
966
+ DA:70,0
967
+ DA:71,0
968
+ DA:79,0
969
+ DA:80,0
970
+ DA:90,0
971
+ DA:91,0
972
+ DA:99,0
973
+ DA:107,0
974
+ DA:108,0
975
+ DA:115,0
976
+ DA:116,0
977
+ DA:124,0
978
+ DA:125,0
979
+ DA:126,0
980
+ DA:163,1
981
+ DA:165,0
982
+ DA:172,0
983
+ DA:173,0
984
+ DA:174,0
985
+ DA:181,0
986
+ DA:182,0
987
+ DA:183,0
988
+ DA:190,0
989
+ DA:191,0
990
+ DA:192,0
991
+ DA:199,0
992
+ DA:200,0
993
+ DA:201,0
994
+ DA:209,0
995
+ DA:241,0
996
+ DA:251,1
997
+ DA:252,0
998
+ DA:255,1
999
+ DA:256,0
1000
+ DA:257,0
1001
+ DA:258,0
1002
+ DA:259,0
1003
+ DA:261,0
1004
+ DA:262,0
1005
+ DA:266,1
1006
+ DA:267,0
1007
+ DA:268,0
1008
+ DA:269,0
1009
+ DA:270,0
1010
+ DA:272,0
1011
+ DA:273,0
1012
+ DA:277,1
1013
+ DA:279,0
1014
+ DA:280,0
1015
+ DA:281,0
1016
+ DA:285,0
1017
+ DA:286,0
1018
+ DA:287,0
1019
+ DA:292,1
1020
+ DA:293,0
1021
+ DA:294,0
1022
+ DA:295,0
1023
+ DA:296,0
1024
+ DA:297,0
1025
+ DA:300,0
1026
+ DA:301,0
1027
+ DA:306,0
1028
+ DA:307,0
1029
+ DA:308,0
1030
+ DA:313,1
1031
+ DA:314,0
1032
+ DA:315,0
1033
+ DA:316,0
1034
+ DA:317,0
1035
+ DA:318,0
1036
+ DA:319,0
1037
+ DA:320,0
1038
+ DA:321,0
1039
+ DA:322,0
1040
+ DA:323,0
1041
+ DA:324,0
1042
+ DA:327,0
1043
+ DA:328,0
1044
+ DA:329,0
1045
+ DA:333,0
1046
+ DA:334,0
1047
+ DA:335,0
1048
+ DA:336,0
1049
+ DA:337,0
1050
+ DA:338,0
1051
+ DA:341,0
1052
+ DA:342,0
1053
+ DA:343,0
1054
+ DA:344,0
1055
+ DA:348,0
1056
+ DA:350,0
1057
+ DA:351,0
1058
+ DA:352,0
1059
+ DA:353,0
1060
+ DA:355,0
1061
+ DA:356,0
1062
+ DA:357,0
1063
+ DA:362,0
1064
+ DA:363,0
1065
+ DA:364,0
1066
+ DA:365,0
1067
+ DA:366,0
1068
+ DA:369,0
1069
+ DA:371,0
1070
+ DA:372,0
1071
+ DA:374,0
1072
+ DA:375,0
1073
+ DA:377,0
1074
+ DA:378,0
1075
+ DA:379,0
1076
+ DA:380,0
1077
+ DA:383,0
1078
+ DA:384,0
1079
+ DA:386,0
1080
+ DA:387,0
1081
+ DA:388,0
1082
+ DA:390,0
1083
+ DA:391,0
1084
+ DA:394,0
1085
+ DA:396,0
1086
+ DA:397,0
1087
+ DA:398,0
1088
+ DA:399,0
1089
+ DA:401,0
1090
+ DA:403,0
1091
+ DA:406,0
1092
+ DA:407,0
1093
+ DA:408,0
1094
+ DA:414,0
1095
+ DA:415,0
1096
+ DA:417,0
1097
+ DA:421,0
1098
+ DA:422,0
1099
+ DA:424,0
1100
+ DA:428,0
1101
+ DA:429,0
1102
+ DA:431,0
1103
+ DA:432,0
1104
+ DA:433,0
1105
+ DA:434,0
1106
+ DA:435,0
1107
+ DA:436,0
1108
+ DA:438,0
1109
+ DA:440,0
1110
+ DA:446,0
1111
+ DA:448,0
1112
+ DA:452,0
1113
+ DA:454,0
1114
+ DA:455,0
1115
+ DA:456,0
1116
+ DA:459,0
1117
+ DA:462,0
1118
+ DA:463,0
1119
+ DA:468,0
1120
+ DA:469,0
1121
+ DA:471,0
1122
+ DA:472,0
1123
+ DA:476,0
1124
+ DA:477,0
1125
+ DA:478,0
1126
+ DA:479,0
1127
+ DA:481,0
1128
+ DA:491,0
1129
+ DA:492,0
1130
+ DA:495,0
1131
+ DA:503,0
1132
+ DA:507,1
1133
+ DA:508,0
1134
+ DA:509,0
1135
+ DA:511,0
1136
+ DA:513,0
1137
+ DA:516,0
1138
+ DA:517,0
1139
+ DA:520,0
1140
+ DA:521,0
1141
+ DA:522,0
1142
+ DA:526,0
1143
+ DA:527,0
1144
+ DA:529,0
1145
+ DA:530,0
1146
+ LF:192
1147
+ LH:12
1148
+ BRDA:258,1,0,0
1149
+ BRDA:258,1,1,0
1150
+ BRDA:269,2,0,0
1151
+ BRDA:269,2,1,0
1152
+ BRDA:280,3,0,0
1153
+ BRDA:280,3,1,0
1154
+ BRDA:286,4,0,0
1155
+ BRDA:286,4,1,0
1156
+ BRDA:294,5,0,0
1157
+ BRDA:294,5,1,0
1158
+ BRDA:296,6,0,0
1159
+ BRDA:296,6,1,0
1160
+ BRDA:296,7,0,0
1161
+ BRDA:296,7,1,0
1162
+ BRDA:306,8,0,0
1163
+ BRDA:306,8,1,0
1164
+ BRDA:328,9,0,0
1165
+ BRDA:328,9,1,0
1166
+ BRDA:335,10,0,0
1167
+ BRDA:335,10,1,0
1168
+ BRDA:337,11,0,0
1169
+ BRDA:337,11,1,0
1170
+ BRDA:337,12,0,0
1171
+ BRDA:337,12,1,0
1172
+ BRDA:351,13,0,0
1173
+ BRDA:351,13,1,0
1174
+ BRDA:352,14,0,0
1175
+ BRDA:352,14,1,0
1176
+ BRDA:355,15,0,0
1177
+ BRDA:355,15,1,0
1178
+ BRDA:363,16,0,0
1179
+ BRDA:363,16,1,0
1180
+ BRDA:371,17,0,0
1181
+ BRDA:371,17,1,0
1182
+ BRDA:372,18,0,0
1183
+ BRDA:372,18,1,0
1184
+ BRDA:384,19,0,0
1185
+ BRDA:384,19,1,0
1186
+ BRDA:388,20,0,0
1187
+ BRDA:388,20,1,0
1188
+ BRDA:388,21,0,0
1189
+ BRDA:388,21,1,0
1190
+ BRDA:394,22,0,0
1191
+ BRDA:394,22,1,0
1192
+ BRDA:398,23,0,0
1193
+ BRDA:398,23,1,0
1194
+ BRDA:398,24,0,0
1195
+ BRDA:398,24,1,0
1196
+ BRDA:401,25,0,0
1197
+ BRDA:401,25,1,0
1198
+ BRDA:401,26,0,0
1199
+ BRDA:401,26,1,0
1200
+ BRDA:401,26,2,0
1201
+ BRDA:401,26,3,0
1202
+ BRDA:414,27,0,0
1203
+ BRDA:414,27,1,0
1204
+ BRDA:415,28,0,0
1205
+ BRDA:415,28,1,0
1206
+ BRDA:431,29,0,0
1207
+ BRDA:431,29,1,0
1208
+ BRDA:434,30,0,0
1209
+ BRDA:434,30,1,0
1210
+ BRDA:454,31,0,0
1211
+ BRDA:454,31,1,0
1212
+ BRDA:468,32,0,0
1213
+ BRDA:468,32,1,0
1214
+ BRDA:477,33,0,0
1215
+ BRDA:477,33,1,0
1216
+ BRDA:478,34,0,0
1217
+ BRDA:478,34,1,0
1218
+ BRDA:513,35,0,0
1219
+ BRDA:513,35,1,0
1220
+ BRDA:517,36,0,0
1221
+ BRDA:517,36,1,0
1222
+ BRDA:526,37,0,0
1223
+ BRDA:526,37,1,0
1224
+ BRF:76
1225
+ BRH:0
1226
+ end_of_record
1227
+ TN:
1228
+ SF:/Users/dondi/Documents/Main/Code/git/GRNsight/server/controllers/helpers.js
1229
+ FN:3,(anonymous_1)
1230
+ FN:18,(anonymous_2)
1231
+ FN:26,(anonymous_3)
1232
+ FN:30,(anonymous_4)
1233
+ FNF:4
1234
+ FNH:0
1235
+ FNDA:0,(anonymous_1)
1236
+ FNDA:0,(anonymous_2)
1237
+ FNDA:0,(anonymous_3)
1238
+ FNDA:0,(anonymous_4)
253
1239
  DA:1,1
254
1240
  DA:3,1
255
- DA:4,1
256
- DA:6,1
257
- DA:7,2
258
- DA:8,0
259
- DA:9,0
260
- DA:10,0
261
- DA:12,0
262
- DA:13,0
263
- DA:15,0
264
- DA:16,0
265
- DA:17,0
1241
+ DA:4,0
1242
+ DA:18,1
1243
+ DA:19,0
1244
+ DA:20,0
266
1245
  DA:21,0
267
- DA:22,0
268
- DA:24,0
1246
+ DA:24,1
269
1247
  DA:27,0
270
- DA:28,0
271
1248
  DA:31,0
272
1249
  DA:32,0
273
1250
  DA:33,0
274
- DA:35,0
275
- DA:36,0
276
- DA:37,0
277
- DA:43,0
278
- DA:44,0
279
- DA:47,0
280
- DA:48,0
281
- DA:52,2
282
- LF:29
283
- LH:6
284
- BRDA:7,0,0,0
285
- BRDA:7,0,1,2
286
- BRDA:16,1,0,0
287
- BRDA:16,1,1,0
288
- BRDA:27,2,0,0
289
- BRDA:27,2,1,0
290
- BRDA:32,3,0,0
291
- BRDA:32,3,1,0
292
- BRDA:37,4,0,0
293
- BRDA:37,4,1,0
294
- BRF:10
295
- BRH:1
1251
+ LF:12
1252
+ LH:4
1253
+ BRF:0
1254
+ BRH:0
1255
+ end_of_record
1256
+ TN:
1257
+ SF:/Users/dondi/Documents/Main/Code/git/GRNsight/server/controllers/constants.js
1258
+ FNF:0
1259
+ FNH:0
1260
+ DA:1,1
1261
+ LF:1
1262
+ LH:1
1263
+ BRF:0
1264
+ BRH:0
296
1265
  end_of_record
297
1266
  TN:
298
1267
  SF:/Users/dondi/Documents/Main/Code/git/GRNsight/server/controllers/semantic-checker.js
299
- FN:20,missingSourceGeneWarning
300
- FN:29,missingTargetGeneWarning
301
- FN:38,invalidMatrixDataWarning
302
- FN:47,randomDataWarning
303
- FN:57,emptyRowWarning
304
- FN:65,networkSizeWarning
305
- FN:76,emptyNetworkError
306
- FN:85,semanticDuplicateGeneError
307
- FN:93,geneLengthError
308
- FN:102,networkSizeError
309
- FN:111,specialCharacterError
310
- FN:173,checkNetworkSize
311
- FN:189,checkDuplicateErrors
312
- FN:197,checkDuplicates
313
- FN:213,checkGeneLength
314
- FN:223,checkSpecialCharacter
315
- FN:232,checkIfEmptyNetwork
316
- FN:239,(anonymous_17)
317
- FNF:18
318
- FNH:12
319
- FNDA:0,missingSourceGeneWarning
320
- FNDA:0,missingTargetGeneWarning
321
- FNDA:0,invalidMatrixDataWarning
322
- FNDA:0,randomDataWarning
323
- FNDA:0,emptyRowWarning
324
- FNDA:2,networkSizeWarning
325
- FNDA:1,emptyNetworkError
326
- FNDA:0,semanticDuplicateGeneError
327
- FNDA:2,geneLengthError
328
- FNDA:2,networkSizeError
329
- FNDA:125,specialCharacterError
330
- FNDA:431,checkNetworkSize
331
- FNDA:431,checkDuplicateErrors
332
- FNDA:431,checkDuplicates
333
- FNDA:431,checkGeneLength
334
- FNDA:431,checkSpecialCharacter
335
- FNDA:431,checkIfEmptyNetwork
336
- FNDA:431,(anonymous_17)
1268
+ FN:20,(anonymous_1)
1269
+ FN:29,(anonymous_2)
1270
+ FN:37,(anonymous_3)
1271
+ FN:46,(anonymous_4)
1272
+ FN:55,(anonymous_5)
1273
+ FN:65,(anonymous_6)
1274
+ FN:73,(anonymous_7)
1275
+ FN:84,(anonymous_8)
1276
+ FN:93,(anonymous_9)
1277
+ FN:101,(anonymous_10)
1278
+ FN:110,(anonymous_11)
1279
+ FN:119,(anonymous_12)
1280
+ FN:181,(anonymous_13)
1281
+ FN:197,(anonymous_14)
1282
+ FN:205,(anonymous_15)
1283
+ FN:221,(anonymous_16)
1284
+ FN:231,(anonymous_17)
1285
+ FN:240,(anonymous_18)
1286
+ FN:247,(anonymous_19)
1287
+ FNF:19
1288
+ FNH:0
1289
+ FNDA:0,(anonymous_1)
1290
+ FNDA:0,(anonymous_2)
1291
+ FNDA:0,(anonymous_3)
1292
+ FNDA:0,(anonymous_4)
1293
+ FNDA:0,(anonymous_5)
1294
+ FNDA:0,(anonymous_6)
1295
+ FNDA:0,(anonymous_7)
1296
+ FNDA:0,(anonymous_8)
1297
+ FNDA:0,(anonymous_9)
1298
+ FNDA:0,(anonymous_10)
1299
+ FNDA:0,(anonymous_11)
1300
+ FNDA:0,(anonymous_12)
1301
+ FNDA:0,(anonymous_13)
1302
+ FNDA:0,(anonymous_14)
1303
+ FNDA:0,(anonymous_15)
1304
+ FNDA:0,(anonymous_16)
1305
+ FNDA:0,(anonymous_17)
1306
+ FNDA:0,(anonymous_18)
1307
+ FNDA:0,(anonymous_19)
337
1308
  DA:9,1
338
1309
  DA:19,1
339
1310
  DA:21,0
340
1311
  DA:22,0
341
1312
  DA:23,0
342
1313
  DA:30,0
343
- DA:31,0
344
- DA:32,0
1314
+ DA:38,0
345
1315
  DA:39,0
346
1316
  DA:40,0
347
- DA:41,0
1317
+ DA:47,0
348
1318
  DA:48,0
349
1319
  DA:49,0
350
- DA:50,0
1320
+ DA:56,0
1321
+ DA:57,0
351
1322
  DA:58,0
352
- DA:59,0
353
- DA:66,2
354
- DA:74,1
355
- DA:77,1
356
- DA:86,0
357
- DA:94,2
358
- DA:103,2
359
- DA:112,125
360
- DA:173,1
361
- DA:174,431
362
- DA:175,431
363
- DA:176,431
364
- DA:177,431
365
- DA:178,431
366
- DA:179,431
367
- DA:181,431
368
- DA:183,2
369
- DA:184,429
370
- DA:185,2
371
- DA:189,1
372
- DA:190,431
373
- DA:191,98345
374
- DA:192,12
1323
+ DA:66,0
1324
+ DA:67,0
1325
+ DA:74,0
1326
+ DA:82,1
1327
+ DA:85,0
1328
+ DA:94,0
1329
+ DA:102,0
1330
+ DA:111,0
1331
+ DA:120,0
1332
+ DA:181,1
1333
+ DA:182,0
1334
+ DA:183,0
1335
+ DA:184,0
1336
+ DA:185,0
1337
+ DA:186,0
1338
+ DA:187,0
1339
+ DA:189,0
1340
+ DA:191,0
1341
+ DA:192,0
1342
+ DA:193,0
375
1343
  DA:197,1
376
- DA:198,431
377
- DA:199,419
378
- DA:200,419
379
- DA:201,6229
380
- DA:204,419
381
- DA:205,419
382
- DA:206,5811
1344
+ DA:198,0
1345
+ DA:199,0
1346
+ DA:200,0
1347
+ DA:205,1
1348
+ DA:206,0
383
1349
  DA:207,0
384
- DA:213,1
385
- DA:215,431
386
- DA:216,431
387
- DA:217,6323
388
- DA:218,2
389
- DA:223,1
390
- DA:224,431
391
- DA:225,431
392
- DA:226,6323
393
- DA:227,125
394
- DA:232,1
395
- DA:233,431
396
- DA:234,1
397
- DA:239,1
398
- DA:240,431
399
- DA:241,431
400
- DA:242,431
401
- DA:243,431
402
- DA:244,431
403
- DA:246,431
404
- LF:67
405
- LH:51
406
- BRDA:181,0,0,2
407
- BRDA:181,0,1,429
408
- BRDA:181,1,0,431
409
- BRDA:181,1,1,2
410
- BRDA:181,1,2,430
411
- BRDA:181,1,3,2
412
- BRDA:184,2,0,2
413
- BRDA:184,2,1,427
414
- BRDA:184,3,0,429
415
- BRDA:184,3,1,428
416
- BRDA:191,4,0,12
417
- BRDA:191,4,1,98333
418
- BRDA:198,5,0,419
419
- BRDA:198,5,1,12
1350
+ DA:208,0
1351
+ DA:209,0
1352
+ DA:212,0
1353
+ DA:213,0
1354
+ DA:214,0
1355
+ DA:215,0
1356
+ DA:221,1
1357
+ DA:223,0
1358
+ DA:224,0
1359
+ DA:225,0
1360
+ DA:226,0
1361
+ DA:231,1
1362
+ DA:232,0
1363
+ DA:233,0
1364
+ DA:234,0
1365
+ DA:235,0
1366
+ DA:240,1
1367
+ DA:241,0
1368
+ DA:242,0
1369
+ DA:247,1
1370
+ DA:248,0
1371
+ DA:249,0
1372
+ DA:250,0
1373
+ DA:251,0
1374
+ DA:253,0
1375
+ DA:255,0
1376
+ LF:68
1377
+ LH:10
1378
+ BRDA:189,1,0,0
1379
+ BRDA:189,1,1,0
1380
+ BRDA:189,2,0,0
1381
+ BRDA:189,2,1,0
1382
+ BRDA:189,2,2,0
1383
+ BRDA:189,2,3,0
1384
+ BRDA:192,3,0,0
1385
+ BRDA:192,3,1,0
1386
+ BRDA:192,4,0,0
1387
+ BRDA:192,4,1,0
1388
+ BRDA:199,5,0,0
1389
+ BRDA:199,5,1,0
420
1390
  BRDA:206,6,0,0
421
- BRDA:206,6,1,5811
422
- BRDA:217,7,0,2
423
- BRDA:217,7,1,6321
424
- BRDA:226,8,0,125
425
- BRDA:226,8,1,6198
426
- BRDA:233,9,0,1
427
- BRDA:233,9,1,430
1391
+ BRDA:206,6,1,0
1392
+ BRDA:214,7,0,0
1393
+ BRDA:214,7,1,0
1394
+ BRDA:225,8,0,0
1395
+ BRDA:225,8,1,0
1396
+ BRDA:234,9,0,0
1397
+ BRDA:234,9,1,0
1398
+ BRDA:241,10,0,0
1399
+ BRDA:241,10,1,0
428
1400
  BRF:22
429
- BRH:21
1401
+ BRH:0
430
1402
  end_of_record
431
1403
  TN:
432
- SF:/Users/dondi/Documents/Main/Code/git/GRNsight/server/controllers/spreadsheet-controller.js
433
- FN:33,corruptGeneError
434
- FN:43,missingValueError
435
- FN:54,duplicateGeneError
436
- FN:62,dataTypeError
437
- FN:72,emptyRowError
438
- FN:83,outsideCellError
439
- FN:125,missingSourceGeneWarning
440
- FN:134,missingTargetGeneWarning
441
- FN:143,invalidMatrixDataWarning
442
- FN:152,randomDataWarning
443
- FN:162,emptyRowWarning
444
- FN:170,networkSizeWarning
445
- FN:178,incorrectlyNamedSheetWarning
446
- FN:189,addMessageToArray
447
- FN:193,addWarning
448
- FN:204,addError
449
- FN:215,checkDuplicates
450
- FN:230,parseSheet
451
- FN:427,processGRNmap
452
- FN:453,grnSightToCytoscape
453
- FN:455,(anonymous_20)
454
- FN:463,(anonymous_21)
455
- FN:515,(anonymous_22)
456
- FN:519,(anonymous_23)
457
- FN:521,(anonymous_24)
458
- FN:546,(anonymous_25)
459
- FN:550,(anonymous_26)
460
- FN:555,(anonymous_27)
461
- FN:559,(anonymous_28)
462
- FNF:29
463
- FNH:14
464
- FNDA:0,corruptGeneError
465
- FNDA:0,missingValueError
466
- FNDA:16,duplicateGeneError
467
- FNDA:2,dataTypeError
468
- FNDA:168,emptyRowError
469
- FNDA:0,outsideCellError
470
- FNDA:20,missingSourceGeneWarning
471
- FNDA:28,missingTargetGeneWarning
472
- FNDA:98398,invalidMatrixDataWarning
473
- FNDA:43,randomDataWarning
474
- FNDA:0,emptyRowWarning
475
- FNDA:0,networkSizeWarning
476
- FNDA:63,incorrectlyNamedSheetWarning
477
- FNDA:98724,addMessageToArray
478
- FNDA:98552,addWarning
479
- FNDA:172,addError
480
- FNDA:405,checkDuplicates
481
- FNDA:413,parseSheet
482
- FNDA:0,processGRNmap
483
- FNDA:0,grnSightToCytoscape
1404
+ SF:/Users/dondi/Documents/Main/Code/git/GRNsight/server/controllers/demo-workbooks.js
1405
+ FN:4,(anonymous_1)
1406
+ FN:14,(anonymous_2)
1407
+ FN:1666,(anonymous_3)
1408
+ FN:3353,(anonymous_4)
1409
+ FN:3933,(anonymous_5)
1410
+ FN:4531,(anonymous_6)
1411
+ FNF:6
1412
+ FNH:0
1413
+ FNDA:0,(anonymous_1)
1414
+ FNDA:0,(anonymous_2)
1415
+ FNDA:0,(anonymous_3)
1416
+ FNDA:0,(anonymous_4)
1417
+ FNDA:0,(anonymous_5)
1418
+ FNDA:0,(anonymous_6)
1419
+ DA:2,1
1420
+ DA:4,1
1421
+ DA:5,0
1422
+ DA:6,0
1423
+ DA:7,0
1424
+ DA:14,1
1425
+ DA:15,0
1426
+ DA:1663,0
1427
+ DA:1666,1
1428
+ DA:1667,0
1429
+ DA:3350,0
1430
+ DA:3353,1
1431
+ DA:3354,0
1432
+ DA:3930,0
1433
+ DA:3933,1
1434
+ DA:3934,0
1435
+ DA:4528,0
1436
+ DA:4531,1
1437
+ DA:4532,0
1438
+ DA:4533,0
1439
+ DA:4534,0
1440
+ DA:4535,0
1441
+ DA:4536,0
1442
+ DA:4537,0
1443
+ DA:4538,0
1444
+ DA:4539,0
1445
+ LF:26
1446
+ LH:7
1447
+ BRDA:7,1,0,0
1448
+ BRDA:7,1,1,0
1449
+ BRDA:4532,2,0,0
1450
+ BRDA:4532,2,1,0
1451
+ BRDA:4534,3,0,0
1452
+ BRDA:4534,3,1,0
1453
+ BRDA:4536,4,0,0
1454
+ BRDA:4536,4,1,0
1455
+ BRDA:4538,5,0,0
1456
+ BRDA:4538,5,1,0
1457
+ BRF:10
1458
+ BRH:0
1459
+ end_of_record
1460
+ TN:
1461
+ SF:/Users/dondi/Documents/Main/Code/git/GRNsight/web-client/public/gene/api.js
1462
+ FN:6,(anonymous_1)
1463
+ FN:51,(anonymous_2)
1464
+ FN:66,(anonymous_3)
1465
+ FN:76,(anonymous_4)
1466
+ FN:89,(anonymous_5)
1467
+ FN:100,(anonymous_6)
1468
+ FN:105,(anonymous_7)
1469
+ FN:108,(anonymous_8)
1470
+ FN:113,(anonymous_9)
1471
+ FN:118,(anonymous_10)
1472
+ FN:135,(anonymous_11)
1473
+ FN:140,(anonymous_12)
1474
+ FN:146,(anonymous_13)
1475
+ FN:154,(anonymous_14)
1476
+ FN:158,(anonymous_15)
1477
+ FN:163,(anonymous_16)
1478
+ FN:180,(anonymous_17)
1479
+ FN:200,(anonymous_18)
1480
+ FN:254,(anonymous_19)
1481
+ FN:272,(anonymous_20)
1482
+ FN:290,(anonymous_21)
1483
+ FN:328,(anonymous_22)
1484
+ FN:348,(anonymous_23)
1485
+ FN:357,(anonymous_24)
1486
+ FN:360,(anonymous_25)
1487
+ FN:363,(anonymous_26)
1488
+ FN:367,(anonymous_27)
1489
+ FN:372,(anonymous_28)
1490
+ FN:379,(anonymous_29)
1491
+ FN:383,(anonymous_30)
1492
+ FN:387,(anonymous_31)
1493
+ FNF:31
1494
+ FNH:1
1495
+ FNDA:0,(anonymous_1)
1496
+ FNDA:0,(anonymous_2)
1497
+ FNDA:0,(anonymous_3)
1498
+ FNDA:0,(anonymous_4)
1499
+ FNDA:0,(anonymous_5)
1500
+ FNDA:0,(anonymous_6)
1501
+ FNDA:0,(anonymous_7)
1502
+ FNDA:0,(anonymous_8)
1503
+ FNDA:0,(anonymous_9)
1504
+ FNDA:0,(anonymous_10)
1505
+ FNDA:0,(anonymous_11)
1506
+ FNDA:0,(anonymous_12)
1507
+ FNDA:0,(anonymous_13)
1508
+ FNDA:0,(anonymous_14)
1509
+ FNDA:0,(anonymous_15)
1510
+ FNDA:0,(anonymous_16)
1511
+ FNDA:0,(anonymous_17)
1512
+ FNDA:0,(anonymous_18)
1513
+ FNDA:0,(anonymous_19)
484
1514
  FNDA:0,(anonymous_20)
485
1515
  FNDA:0,(anonymous_21)
486
- FNDA:2,(anonymous_22)
487
- FNDA:0,(anonymous_23)
1516
+ FNDA:0,(anonymous_22)
1517
+ FNDA:1,(anonymous_23)
488
1518
  FNDA:0,(anonymous_24)
489
1519
  FNDA:0,(anonymous_25)
490
1520
  FNDA:0,(anonymous_26)
491
1521
  FNDA:0,(anonymous_27)
492
1522
  FNDA:0,(anonymous_28)
493
- DA:1,1
494
- DA:2,1
1523
+ FNDA:0,(anonymous_29)
1524
+ FNDA:0,(anonymous_30)
1525
+ FNDA:0,(anonymous_31)
495
1526
  DA:4,1
496
1527
  DA:5,1
497
- DA:8,1
498
- DA:10,1
499
- DA:13,1
500
- DA:24,1
501
- DA:34,0
502
- DA:35,0
503
- DA:36,0
504
- DA:44,0
505
- DA:45,0
506
- DA:46,0
507
- DA:55,16
508
- DA:63,2
509
- DA:64,2
510
- DA:65,2
511
- DA:73,168
512
- DA:74,168
513
- DA:84,0
514
- DA:85,0
515
- DA:86,0
516
- DA:124,1
517
- DA:126,20
518
- DA:127,20
519
- DA:128,20
520
- DA:135,28
521
- DA:136,28
522
- DA:137,28
523
- DA:144,98398
524
- DA:145,98398
525
- DA:146,98398
526
- DA:153,43
527
- DA:154,43
528
- DA:155,43
529
- DA:163,0
1528
+ DA:6,1
1529
+ DA:7,0
1530
+ DA:11,1
1531
+ DA:19,1
1532
+ DA:25,1
1533
+ DA:32,1
1534
+ DA:38,1
1535
+ DA:43,1
1536
+ DA:51,1
1537
+ DA:52,0
1538
+ DA:53,0
1539
+ DA:55,0
1540
+ DA:67,0
1541
+ DA:68,0
1542
+ DA:69,0
1543
+ DA:76,1
1544
+ DA:77,0
1545
+ DA:78,0
1546
+ DA:81,0
1547
+ DA:90,0
1548
+ DA:91,0
1549
+ DA:92,0
1550
+ DA:100,1
1551
+ DA:101,0
1552
+ DA:102,0
1553
+ DA:106,0
1554
+ DA:109,0
1555
+ DA:113,1
1556
+ DA:114,0
1557
+ DA:115,0
1558
+ DA:119,0
1559
+ DA:135,1
1560
+ DA:136,0
1561
+ DA:137,0
1562
+ DA:141,0
1563
+ DA:146,1
1564
+ DA:147,0
1565
+ DA:148,0
1566
+ DA:151,0
1567
+ DA:155,0
1568
+ DA:159,0
530
1569
  DA:164,0
531
- DA:171,0
532
- DA:179,63
533
- DA:189,1
534
- DA:190,98724
535
- DA:193,1
536
- DA:194,98552
537
- DA:195,98552
538
- DA:196,98552
539
- DA:197,428
540
- DA:199,98124
541
- DA:200,98124
542
- DA:204,1
543
- DA:205,172
544
- DA:206,172
545
- DA:207,172
546
- DA:208,168
547
- DA:210,4
548
- DA:211,4
549
- DA:215,1
550
- DA:217,405
551
- DA:218,5722
552
- DA:219,8
553
- DA:223,405
554
- DA:224,5721
555
- DA:225,8
556
- DA:230,1
557
- DA:232,413
558
- DA:247,413
559
- DA:248,413
560
- DA:249,413
561
- DA:252,413
562
- DA:253,3032
563
- DA:256,347
564
- DA:257,2685
565
- DA:260,204
566
- DA:261,204
567
- DA:262,204
568
- DA:269,413
569
- DA:270,2
570
- DA:271,2
571
- DA:274,411
572
- DA:275,6751
573
- DA:276,168
574
- DA:277,4
575
- DA:283,6583
576
- DA:284,6583
577
- DA:286,233251
578
- DA:288,6201
579
- DA:289,6201
580
- DA:291,6201
581
- DA:292,20
582
- DA:293,6181
583
- DA:294,0
584
- DA:297,6181
585
- DA:298,6181
586
- DA:299,6181
587
- DA:300,6181
588
- DA:303,0
589
- DA:304,0
590
- DA:306,227050
591
- DA:308,6172
592
- DA:309,6172
593
- DA:310,6172
594
- DA:311,28
595
- DA:312,6144
596
- DA:313,0
597
- DA:316,6144
598
- DA:317,6144
599
- DA:322,6144
600
- DA:323,87
601
- DA:324,87
602
- DA:328,0
603
- DA:329,0
1570
+ DA:170,1
1571
+ DA:180,1
1572
+ DA:182,0
1573
+ DA:183,0
1574
+ DA:185,0
1575
+ DA:193,0
1576
+ DA:200,1
1577
+ DA:203,0
1578
+ DA:209,0
1579
+ DA:210,0
1580
+ DA:211,0
1581
+ DA:212,0
1582
+ DA:213,0
1583
+ DA:217,0
1584
+ DA:218,0
1585
+ DA:220,0
1586
+ DA:225,0
1587
+ DA:227,0
1588
+ DA:232,0
1589
+ DA:234,0
1590
+ DA:239,0
1591
+ DA:245,0
1592
+ DA:246,0
1593
+ DA:247,0
1594
+ DA:251,0
1595
+ DA:254,1
1596
+ DA:255,0
1597
+ DA:262,0
1598
+ DA:263,0
1599
+ DA:264,0
1600
+ DA:268,0
1601
+ DA:272,1
1602
+ DA:273,0
1603
+ DA:275,0
1604
+ DA:281,0
1605
+ DA:282,0
1606
+ DA:283,0
1607
+ DA:287,0
1608
+ DA:290,1
1609
+ DA:291,0
1610
+ DA:297,0
1611
+ DA:299,0
1612
+ DA:300,0
1613
+ DA:306,0
1614
+ DA:328,1
604
1615
  DA:330,0
605
- DA:331,0
606
- DA:334,220878
607
- DA:335,220878
608
- DA:337,98398
609
- DA:338,122480
610
- DA:340,2
611
- DA:341,2
612
- DA:343,122478
613
- DA:345,11384
614
- DA:346,11384
615
- DA:347,11384
616
- DA:348,43
617
- DA:349,11341
618
- DA:351,0
619
- DA:354,11341
620
- DA:355,11341
621
- DA:356,11341
622
- DA:360,11341
623
- DA:361,4600
624
- DA:363,2280
625
- DA:367,2280
626
- DA:368,2280
627
- DA:370,2320
628
- DA:373,2320
629
- DA:374,2320
630
- DA:376,6741
631
- DA:377,6741
632
- DA:378,6741
633
- DA:379,6741
634
- DA:380,63
635
- DA:381,63
636
- DA:383,6741
637
- DA:385,11341
638
- DA:391,0
1616
+ DA:338,0
1617
+ DA:339,0
1618
+ DA:340,0
1619
+ DA:344,0
1620
+ DA:348,1
1621
+ DA:349,1
1622
+ DA:358,0
1623
+ DA:361,0
1624
+ DA:362,0
1625
+ DA:365,0
1626
+ DA:366,0
1627
+ DA:370,0
1628
+ DA:371,0
1629
+ DA:374,0
1630
+ DA:378,0
1631
+ DA:381,0
1632
+ DA:382,0
1633
+ DA:385,0
1634
+ DA:386,0
1635
+ DA:389,0
1636
+ DA:390,0
1637
+ DA:392,0
639
1638
  DA:393,0
640
- DA:396,233249
641
- DA:398,6581
642
- DA:401,0
643
- DA:402,0
644
- DA:412,405
645
- DA:413,405
646
- DA:416,405
647
- DA:424,405
648
- DA:427,1
649
- DA:431,0
650
- DA:433,0
651
- DA:434,0
652
- DA:436,0
653
- DA:439,0
654
- DA:440,0
655
- DA:443,0
656
- DA:444,0
657
- DA:446,0
658
- DA:453,1
659
- DA:454,0
660
- DA:455,0
661
- DA:456,0
662
- DA:463,0
663
- DA:464,0
664
- DA:465,0
665
- DA:466,0
666
- DA:475,0
667
- DA:515,1
668
- DA:516,2
669
- DA:519,0
670
- DA:521,0
671
- DA:522,0
672
- DA:523,0
673
- DA:526,0
674
- DA:527,0
675
- DA:529,0
676
- DA:532,0
677
- DA:533,0
678
- DA:541,0
679
- DA:546,0
680
- DA:547,0
681
- DA:550,0
682
- DA:551,0
683
- DA:555,0
684
- DA:556,0
685
- DA:559,0
686
- DA:560,0
687
- DA:566,2
688
- LF:195
689
- LH:135
690
- BRDA:196,0,0,428
691
- BRDA:196,0,1,98124
692
- BRDA:207,1,0,168
693
- BRDA:207,1,1,4
694
- BRDA:218,2,0,8
695
- BRDA:218,2,1,5714
696
- BRDA:224,3,0,8
697
- BRDA:224,3,1,5713
698
- BRDA:253,4,0,347
699
- BRDA:253,4,1,2685
700
- BRDA:257,5,0,204
701
- BRDA:257,5,1,2481
702
- BRDA:269,6,0,2
703
- BRDA:269,6,1,411
704
- BRDA:275,7,0,168
705
- BRDA:275,7,1,6583
706
- BRDA:276,8,0,4
707
- BRDA:276,8,1,164
708
- BRDA:286,9,0,6201
709
- BRDA:286,9,1,227050
710
- BRDA:291,10,0,20
711
- BRDA:291,10,1,6181
712
- BRDA:293,11,0,0
713
- BRDA:293,11,1,6181
714
- BRDA:293,12,0,6181
715
- BRDA:293,12,1,6097
716
- BRDA:306,13,0,6172
717
- BRDA:306,13,1,220878
718
- BRDA:310,14,0,28
719
- BRDA:310,14,1,6144
720
- BRDA:312,15,0,0
721
- BRDA:312,15,1,6144
722
- BRDA:312,16,0,6144
723
- BRDA:312,16,1,6060
724
- BRDA:322,17,0,87
725
- BRDA:322,17,1,6057
726
- BRDA:335,18,0,98398
727
- BRDA:335,18,1,122480
728
- BRDA:338,19,0,2
729
- BRDA:338,19,1,122478
730
- BRDA:338,20,0,122480
731
- BRDA:338,20,1,122480
732
- BRDA:343,21,0,11384
733
- BRDA:343,21,1,111094
734
- BRDA:347,22,0,43
735
- BRDA:347,22,1,11341
736
- BRDA:347,23,0,11384
737
- BRDA:347,23,1,11359
738
- BRDA:349,24,0,0
739
- BRDA:349,24,1,11341
740
- BRDA:349,25,0,11341
741
- BRDA:349,25,1,11221
742
- BRDA:349,25,2,11341
743
- BRDA:349,25,3,11221
744
- BRDA:360,26,0,4600
745
- BRDA:360,26,1,6741
746
- BRDA:361,27,0,2280
747
- BRDA:361,27,1,2320
748
- BRDA:376,28,0,6741
749
- BRDA:376,28,1,0
750
- BRDA:379,29,0,63
751
- BRDA:379,29,1,6678
752
- BRDA:448,30,0,0
753
- BRDA:448,30,1,0
754
- BRDA:516,31,0,0
755
- BRDA:516,31,1,2
756
- BRDA:522,32,0,0
757
- BRDA:522,32,1,0
758
- BRDA:532,33,0,0
759
- BRDA:532,33,1,0
760
- BRF:70
761
- BRH:59
1639
+ DA:394,0
1640
+ DA:395,0
1641
+ DA:397,0
1642
+ DA:405,0
1643
+ DA:407,0
1644
+ DA:408,0
1645
+ DA:411,0
1646
+ DA:412,0
1647
+ DA:413,0
1648
+ DA:414,0
1649
+ DA:416,0
1650
+ DA:418,0
1651
+ DA:419,0
1652
+ DA:421,0
1653
+ DA:422,0
1654
+ DA:423,0
1655
+ DA:424,0
1656
+ DA:425,0
1657
+ DA:426,0
1658
+ DA:427,0
1659
+ DA:429,0
1660
+ DA:432,0
1661
+ DA:435,0
1662
+ DA:438,0
1663
+ LF:137
1664
+ LH:24
1665
+ BRDA:159,1,0,0
1666
+ BRDA:159,1,1,0
1667
+ BRDA:159,2,0,0
1668
+ BRDA:159,2,1,0
1669
+ BRDA:185,3,0,0
1670
+ BRDA:185,3,1,0
1671
+ BRDA:212,4,0,0
1672
+ BRDA:212,4,1,0
1673
+ BRDA:217,5,0,0
1674
+ BRDA:217,5,1,0
1675
+ BRDA:218,6,0,0
1676
+ BRDA:218,6,1,0
1677
+ BRDA:218,6,2,0
1678
+ BRDA:246,7,0,0
1679
+ BRDA:246,7,1,0
1680
+ BRDA:263,8,0,0
1681
+ BRDA:263,8,1,0
1682
+ BRDA:263,9,0,0
1683
+ BRDA:263,9,1,0
1684
+ BRDA:282,10,0,0
1685
+ BRDA:282,10,1,0
1686
+ BRDA:282,11,0,0
1687
+ BRDA:282,11,1,0
1688
+ BRDA:299,12,0,0
1689
+ BRDA:299,12,1,0
1690
+ BRDA:299,13,0,0
1691
+ BRDA:299,13,1,0
1692
+ BRDA:339,14,0,0
1693
+ BRDA:339,14,1,0
1694
+ BRDA:339,15,0,0
1695
+ BRDA:339,15,1,0
1696
+ BRDA:397,16,0,0
1697
+ BRDA:397,16,1,0
1698
+ BRDA:398,17,0,0
1699
+ BRDA:398,17,1,0
1700
+ BRDA:398,17,2,0
1701
+ BRDA:398,17,3,0
1702
+ BRDA:398,17,4,0
1703
+ BRDA:398,17,5,0
1704
+ BRDA:426,18,0,0
1705
+ BRDA:426,18,1,0
1706
+ BRF:41
1707
+ BRH:0
762
1708
  end_of_record
763
1709
  TN:
764
- SF:/Users/dondi/Documents/Main/Code/git/GRNsight/server/controllers/exporters/graphml.js
765
- FN:8,grnsightToGraphMlJson
766
- FN:57,(anonymous_1)
767
- FN:67,(anonymous_2)
768
- FN:105,(anonymous_3)
769
- FNF:4
770
- FNH:4
771
- FNDA:5,grnsightToGraphMlJson
772
- FNDA:22,(anonymous_1)
773
- FNDA:19,(anonymous_2)
774
- FNDA:5,(anonymous_3)
1710
+ SF:/Users/dondi/Documents/Main/Code/git/GRNsight/server/controllers/export-controller.js
1711
+ FN:7,(anonymous_1)
1712
+ FN:12,(anonymous_2)
1713
+ FN:18,(anonymous_3)
1714
+ FN:28,(anonymous_4)
1715
+ FN:32,(anonymous_5)
1716
+ FN:41,(anonymous_6)
1717
+ FN:50,(anonymous_7)
1718
+ FN:59,(anonymous_8)
1719
+ FN:68,(anonymous_9)
1720
+ FN:77,(anonymous_10)
1721
+ FNF:10
1722
+ FNH:1
1723
+ FNDA:0,(anonymous_1)
1724
+ FNDA:0,(anonymous_2)
1725
+ FNDA:0,(anonymous_3)
1726
+ FNDA:1,(anonymous_4)
1727
+ FNDA:0,(anonymous_5)
1728
+ FNDA:0,(anonymous_6)
1729
+ FNDA:0,(anonymous_7)
1730
+ FNDA:0,(anonymous_8)
1731
+ FNDA:0,(anonymous_9)
1732
+ FNDA:0,(anonymous_10)
775
1733
  DA:1,1
776
- DA:2,1
1734
+ DA:3,1
777
1735
  DA:4,1
778
1736
  DA:5,1
779
- DA:6,1
780
- DA:8,1
781
- DA:9,5
782
- DA:45,5
783
- DA:46,2
784
- DA:54,5
785
- DA:58,22
786
- DA:68,19
787
- DA:69,19
788
- DA:71,19
789
- DA:87,19
790
- DA:88,8
791
- DA:94,19
792
- DA:98,5
793
- DA:99,1
794
- DA:102,5
795
- DA:105,1
796
- DA:106,5
797
- LF:22
798
- LH:22
799
- BRDA:45,0,0,2
800
- BRDA:45,0,1,3
801
- BRDA:87,1,0,8
802
- BRDA:87,1,1,11
803
- BRDA:98,2,0,1
804
- BRDA:98,2,1,4
805
- BRF:6
806
- BRH:6
1737
+ DA:7,1
1738
+ DA:8,0
1739
+ DA:9,0
1740
+ DA:12,1
1741
+ DA:13,0
1742
+ DA:14,0
1743
+ DA:15,0
1744
+ DA:18,1
1745
+ DA:19,0
1746
+ DA:28,1
1747
+ DA:29,1
1748
+ DA:32,0
1749
+ DA:33,0
1750
+ DA:34,0
1751
+ DA:35,0
1752
+ DA:37,0
1753
+ DA:41,0
1754
+ DA:42,0
1755
+ DA:43,0
1756
+ DA:44,0
1757
+ DA:46,0
1758
+ DA:50,0
1759
+ DA:51,0
1760
+ DA:52,0
1761
+ DA:53,0
1762
+ DA:55,0
1763
+ DA:59,0
1764
+ DA:60,0
1765
+ DA:61,0
1766
+ DA:62,0
1767
+ DA:64,0
1768
+ DA:68,0
1769
+ DA:69,0
1770
+ DA:70,0
1771
+ DA:71,0
1772
+ DA:73,0
1773
+ DA:77,0
1774
+ DA:78,0
1775
+ DA:79,0
1776
+ DA:80,0
1777
+ DA:82,0
1778
+ DA:88,1
1779
+ LF:46
1780
+ LH:10
1781
+ BRDA:29,1,0,0
1782
+ BRDA:29,1,1,1
1783
+ BRF:2
1784
+ BRH:1
807
1785
  end_of_record
808
1786
  TN:
809
1787
  SF:/Users/dondi/Documents/Main/Code/git/GRNsight/server/controllers/exporters/sif.js
810
- FN:3,exportEdges
811
- FN:6,(anonymous_1)
812
- FN:19,(anonymous_2)
813
- FN:22,(anonymous_3)
1788
+ FN:3,(anonymous_1)
1789
+ FN:6,(anonymous_2)
1790
+ FN:19,(anonymous_3)
1791
+ FN:22,(anonymous_4)
814
1792
  FNF:4
815
- FNH:4
816
- FNDA:18,exportEdges
817
- FNDA:74,(anonymous_1)
818
- FNDA:4,(anonymous_2)
819
- FNDA:18,(anonymous_3)
1793
+ FNH:0
1794
+ FNDA:0,(anonymous_1)
1795
+ FNDA:0,(anonymous_2)
1796
+ FNDA:0,(anonymous_3)
1797
+ FNDA:0,(anonymous_4)
820
1798
  DA:1,1
821
1799
  DA:3,1
822
- DA:4,18
823
- DA:6,18
824
- DA:7,74
825
- DA:8,16
826
- DA:16,18
1800
+ DA:4,0
1801
+ DA:6,0
1802
+ DA:7,0
1803
+ DA:8,0
1804
+ DA:16,0
827
1805
  DA:19,1
828
- DA:20,4
829
- DA:22,4
830
- DA:23,18
831
- DA:26,4
1806
+ DA:20,0
1807
+ DA:22,0
1808
+ DA:23,0
1809
+ DA:26,0
832
1810
  LF:12
833
- LH:12
834
- BRDA:7,0,0,16
835
- BRDA:7,0,1,58
836
- BRDA:10,1,0,8
837
- BRDA:10,1,1,8
838
- BRDA:16,2,0,18
839
- BRDA:16,2,1,6
1811
+ LH:3
1812
+ BRDA:7,1,0,0
1813
+ BRDA:7,1,1,0
1814
+ BRDA:10,2,0,0
1815
+ BRDA:10,2,1,0
1816
+ BRDA:16,3,0,0
1817
+ BRDA:16,3,1,0
840
1818
  BRF:6
841
- BRH:6
842
- end_of_record
843
- TN:
844
- SF:/Users/dondi/Documents/Main/Code/git/GRNsight/server/controllers/importers/graphml.js
845
- FN:6,(anonymous_0)
846
- FN:20,parseErr
847
- FN:30,pushRelevantError
848
- FN:34,(anonymous_3)
849
- FN:50,findKeyId
850
- FN:51,(anonymous_5)
851
- FN:57,findYFilesKeyId
852
- FN:58,(anonymous_7)
853
- FN:64,findKey
854
- FN:69,(anonymous_9)
855
- FN:76,findYFilesKey
856
- FN:81,(anonymous_11)
857
- FN:95,(anonymous_12)
858
- FN:96,(anonymous_13)
859
- FN:115,(anonymous_14)
860
- FN:150,(anonymous_15)
861
- FN:161,(anonymous_16)
862
- FNF:17
863
- FNH:17
864
- FNDA:40,(anonymous_0)
865
- FNDA:26,parseErr
866
- FNDA:26,pushRelevantError
867
- FNDA:40,(anonymous_3)
868
- FNDA:42,findKeyId
869
- FNDA:99,(anonymous_5)
870
- FNDA:14,findYFilesKeyId
871
- FNDA:33,(anonymous_7)
872
- FNDA:8,findKey
873
- FNDA:32,(anonymous_9)
874
- FNDA:6,findYFilesKey
875
- FNDA:5,(anonymous_11)
876
- FNDA:18,(anonymous_12)
877
- FNDA:17,(anonymous_13)
878
- FNDA:62,(anonymous_14)
879
- FNDA:50,(anonymous_15)
880
- FNDA:12,(anonymous_16)
881
- DA:1,1
882
- DA:2,1
883
- DA:3,1
884
- DA:4,1
885
- DA:6,1
886
- DA:10,40
887
- DA:20,40
888
- DA:21,26
889
- DA:22,26
890
- DA:23,26
891
- DA:24,26
892
- DA:25,26
893
- DA:27,26
894
- DA:30,40
895
- DA:31,26
896
- DA:34,40
897
- DA:35,40
898
- DA:36,26
899
- DA:38,14
900
- DA:39,0
901
- DA:41,14
902
- DA:42,14
903
- DA:46,40
904
- DA:47,26
905
- DA:50,14
906
- DA:51,42
907
- DA:52,99
908
- DA:57,14
909
- DA:58,14
910
- DA:59,33
911
- DA:64,14
912
- DA:65,8
913
- DA:66,0
914
- DA:69,8
915
- DA:70,32
916
- DA:73,8
917
- DA:76,14
918
- DA:77,6
919
- DA:78,1
920
- DA:81,5
921
- DA:82,5
922
- DA:85,5
923
- DA:92,14
924
- DA:95,14
925
- DA:96,18
926
- DA:97,17
927
- DA:100,3
928
- DA:101,11
929
- DA:102,2
930
- DA:105,14
931
- DA:106,2
932
- DA:109,14
933
- DA:110,14
934
- DA:111,14
935
- DA:113,14
936
- DA:114,14
937
- DA:115,14
938
- DA:116,62
939
- DA:118,62
940
- DA:119,6
941
- DA:120,6
942
- DA:121,5
943
- DA:122,5
944
- DA:123,5
945
- DA:125,5
946
- DA:130,62
947
- DA:131,4
948
- DA:132,4
949
- DA:133,4
950
- DA:137,62
951
- DA:138,4
952
- DA:139,4
953
- DA:140,4
954
- DA:144,62
955
- DA:145,62
956
- DA:149,14
957
- DA:150,14
958
- DA:151,50
959
- DA:156,50
960
- DA:157,3
961
- DA:160,47
962
- DA:161,12
963
- DA:162,12
964
- DA:166,47
965
- DA:170,14
966
- LF:85
967
- LH:83
968
- BRDA:35,0,0,26
969
- BRDA:35,0,1,14
970
- BRDA:38,1,0,0
971
- BRDA:38,1,1,14
972
- BRDA:41,2,0,14
973
- BRDA:41,2,1,14
974
- BRDA:42,3,0,14
975
- BRDA:42,3,1,14
976
- BRDA:42,3,2,14
977
- BRDA:46,4,0,26
978
- BRDA:46,4,1,14
979
- BRDA:51,5,0,42
980
- BRDA:51,5,1,24
981
- BRDA:52,6,0,99
982
- BRDA:52,6,1,74
983
- BRDA:53,7,0,7
984
- BRDA:53,7,1,67
985
- BRDA:52,8,0,74
986
- BRDA:52,8,1,7
987
- BRDA:53,9,0,2
988
- BRDA:53,9,1,5
989
- BRDA:58,10,0,14
990
- BRDA:58,10,1,8
991
- BRDA:59,11,0,33
992
- BRDA:59,11,1,28
993
- BRDA:60,12,0,2
994
- BRDA:60,12,1,26
995
- BRDA:59,13,0,28
996
- BRDA:59,13,1,2
997
- BRDA:60,14,0,2
998
- BRDA:60,14,1,0
999
- BRDA:65,15,0,0
1000
- BRDA:65,15,1,8
1001
- BRDA:73,16,0,8
1002
- BRDA:73,16,1,0
1003
- BRDA:77,17,0,1
1004
- BRDA:77,17,1,5
1005
- BRDA:85,18,0,5
1006
- BRDA:85,18,1,0
1007
- BRDA:95,19,0,3
1008
- BRDA:95,19,1,11
1009
- BRDA:95,20,0,14
1010
- BRDA:95,20,1,5
1011
- BRDA:95,20,2,5
1012
- BRDA:96,21,0,18
1013
- BRDA:96,21,1,17
1014
- BRDA:97,22,0,17
1015
- BRDA:97,22,1,17
1016
- BRDA:101,23,0,2
1017
- BRDA:101,23,1,9
1018
- BRDA:105,24,0,2
1019
- BRDA:105,24,1,12
1020
- BRDA:105,25,0,14
1021
- BRDA:105,25,1,13
1022
- BRDA:114,26,0,14
1023
- BRDA:114,26,1,0
1024
- BRDA:118,27,0,6
1025
- BRDA:118,27,1,56
1026
- BRDA:120,28,0,5
1027
- BRDA:120,28,1,1
1028
- BRDA:122,29,0,5
1029
- BRDA:122,29,1,5
1030
- BRDA:123,30,0,5
1031
- BRDA:123,30,1,0
1032
- BRDA:125,31,0,5
1033
- BRDA:125,31,1,1
1034
- BRDA:130,32,0,4
1035
- BRDA:130,32,1,58
1036
- BRDA:132,33,0,4
1037
- BRDA:132,33,1,0
1038
- BRDA:137,34,0,4
1039
- BRDA:137,34,1,58
1040
- BRDA:139,35,0,4
1041
- BRDA:139,35,1,0
1042
- BRDA:149,36,0,14
1043
- BRDA:149,36,1,0
1044
- BRDA:156,37,0,3
1045
- BRDA:156,37,1,47
1046
- BRDA:156,38,0,50
1047
- BRDA:156,38,1,48
1048
- BRDA:160,39,0,12
1049
- BRDA:160,39,1,35
1050
- BRDA:170,40,0,14
1051
- BRDA:170,40,1,0
1052
- BRF:84
1053
- BRH:73
1819
+ BRH:0
1054
1820
  end_of_record
1055
1821
  TN:
1056
- SF:/Users/dondi/Documents/Main/Code/git/GRNsight/server/controllers/importers/sif.js
1057
- FN:9,(anonymous_0)
1058
- FN:32,isNumber
1059
- FN:36,sifNetworkType
1060
- FN:42,(anonymous_3)
1061
- FN:72,(anonymous_4)
1062
- FN:80,(anonymous_5)
1063
- FN:87,(anonymous_6)
1064
- FN:99,(anonymous_7)
1065
- FN:104,(anonymous_8)
1066
- FN:108,(anonymous_9)
1067
- FN:128,(anonymous_10)
1068
- FNF:11
1069
- FNH:11
1070
- FNDA:25,(anonymous_0)
1071
- FNDA:169,isNumber
1072
- FNDA:25,sifNetworkType
1073
- FNDA:110,(anonymous_3)
1074
- FNDA:110,(anonymous_4)
1075
- FNDA:110,(anonymous_5)
1076
- FNDA:110,(anonymous_6)
1077
- FNDA:9,(anonymous_7)
1078
- FNDA:110,(anonymous_8)
1079
- FNDA:94,(anonymous_9)
1080
- FNDA:117,(anonymous_10)
1822
+ SF:/Users/dondi/Documents/Main/Code/git/GRNsight/server/controllers/exporters/graphml.js
1823
+ FN:8,(anonymous_1)
1824
+ FN:57,(anonymous_2)
1825
+ FN:67,(anonymous_3)
1826
+ FN:105,(anonymous_4)
1827
+ FNF:4
1828
+ FNH:0
1829
+ FNDA:0,(anonymous_1)
1830
+ FNDA:0,(anonymous_2)
1831
+ FNDA:0,(anonymous_3)
1832
+ FNDA:0,(anonymous_4)
1081
1833
  DA:1,1
1082
1834
  DA:2,1
1083
1835
  DA:4,1
1084
1836
  DA:5,1
1085
1837
  DA:6,1
1086
- DA:9,1
1087
- DA:11,25
1088
- DA:12,25
1089
- DA:15,25
1090
- DA:16,25
1091
- DA:19,25
1092
- DA:23,25
1093
- DA:24,4
1094
- DA:28,25
1095
- DA:29,1
1096
- DA:32,25
1097
- DA:33,169
1098
- DA:36,25
1099
- DA:37,25
1100
- DA:38,25
1101
- DA:39,25
1102
- DA:40,25
1103
- DA:42,25
1104
- DA:43,110
1105
- DA:44,74
1106
- DA:45,56
1107
- DA:46,4
1108
- DA:49,74
1109
- DA:50,36
1110
- DA:51,5
1111
- DA:55,25
1112
- DA:56,4
1113
- DA:59,25
1114
- DA:60,5
1115
- DA:63,25
1116
- DA:64,25
1117
- DA:65,25
1118
- DA:72,25
1119
- DA:73,110
1120
- DA:76,25
1121
- DA:77,25
1122
- DA:78,25
1123
- DA:80,25
1124
- DA:81,110
1125
- DA:84,25
1126
- DA:85,0
1127
- DA:87,25
1128
- DA:88,110
1129
- DA:89,105
1130
- DA:93,25
1131
- DA:94,25
1132
- DA:95,2
1133
- DA:98,25
1134
- DA:99,25
1135
- DA:100,9
1136
- DA:104,25
1137
- DA:105,110
1138
- DA:106,74
1139
- DA:107,74
1140
- DA:108,74
1141
- DA:109,94
1142
- DA:110,94
1143
- DA:111,13
1144
- DA:112,13
1145
- DA:114,94
1146
- DA:118,94
1147
- DA:119,13
1148
- DA:121,94
1149
- DA:127,25
1150
- DA:129,117
1151
- DA:139,25
1152
- LF:71
1153
- LH:70
1154
- BRDA:16,0,0,25
1155
- BRDA:16,0,1,1
1156
- BRDA:23,1,0,4
1157
- BRDA:23,1,1,21
1158
- BRDA:23,2,0,25
1159
- BRDA:23,2,1,22
1160
- BRDA:28,3,0,1
1161
- BRDA:28,3,1,24
1162
- BRDA:28,4,0,25
1163
- BRDA:28,4,1,3
1164
- BRDA:43,5,0,74
1165
- BRDA:43,5,1,36
1166
- BRDA:44,6,0,56
1167
- BRDA:44,6,1,18
1168
- BRDA:45,7,0,4
1169
- BRDA:45,7,1,52
1170
- BRDA:50,8,0,5
1171
- BRDA:50,8,1,31
1172
- BRDA:55,9,0,4
1173
- BRDA:55,9,1,21
1174
- BRDA:59,10,0,5
1175
- BRDA:59,10,1,20
1176
- BRDA:66,11,0,6
1177
- BRDA:66,11,1,19
1178
- BRDA:67,12,0,2
1179
- BRDA:67,12,1,23
1180
- BRDA:67,13,0,25
1181
- BRDA:67,13,1,5
1182
- BRDA:84,14,0,0
1183
- BRDA:84,14,1,25
1184
- BRDA:88,15,0,105
1185
- BRDA:88,15,1,5
1186
- BRDA:88,16,0,110
1187
- BRDA:88,16,1,110
1188
- BRDA:88,16,2,110
1189
- BRDA:94,17,0,2
1190
- BRDA:94,17,1,23
1191
- BRDA:98,18,0,25
1192
- BRDA:98,18,1,0
1193
- BRDA:105,19,0,74
1194
- BRDA:105,19,1,36
1195
- BRDA:110,20,0,13
1196
- BRDA:110,20,1,81
1197
- BRDA:118,21,0,13
1198
- BRDA:118,21,1,81
1199
- BRDA:128,22,0,1
1200
- BRDA:128,22,1,24
1201
- BRDA:139,23,0,12
1202
- BRDA:139,23,1,13
1203
- BRF:49
1204
- BRH:47
1838
+ DA:8,1
1839
+ DA:9,0
1840
+ DA:45,0
1841
+ DA:46,0
1842
+ DA:54,0
1843
+ DA:58,0
1844
+ DA:68,0
1845
+ DA:69,0
1846
+ DA:71,0
1847
+ DA:87,0
1848
+ DA:88,0
1849
+ DA:94,0
1850
+ DA:98,0
1851
+ DA:99,0
1852
+ DA:102,0
1853
+ DA:105,1
1854
+ DA:106,0
1855
+ LF:22
1856
+ LH:7
1857
+ BRDA:45,1,0,0
1858
+ BRDA:45,1,1,0
1859
+ BRDA:87,2,0,0
1860
+ BRDA:87,2,1,0
1861
+ BRDA:98,3,0,0
1862
+ BRDA:98,3,1,0
1863
+ BRF:6
1864
+ BRH:0
1205
1865
  end_of_record
1206
1866
  TN:
1207
- SF:/Users/dondi/Documents/Main/Code/git/GRNsight/web-client/public/js/grnstate.js
1208
- FN:4,_annotateLinks
1209
- FN:11,(anonymous_1)
1210
- FN:51,annotateLinks
1211
- FNF:3
1867
+ SF:/Users/dondi/Documents/Main/Code/git/GRNsight/server/controllers/exporters/xlsx.js
1868
+ FN:3,(anonymous_1)
1869
+ FN:8,(anonymous_2)
1870
+ FN:12,(anonymous_3)
1871
+ FN:31,(anonymous_4)
1872
+ FN:43,(anonymous_5)
1873
+ FN:56,(anonymous_6)
1874
+ FN:69,(anonymous_7)
1875
+ FN:102,(anonymous_8)
1876
+ FNF:8
1212
1877
  FNH:0
1213
- FNDA:0,_annotateLinks
1214
1878
  FNDA:0,(anonymous_1)
1215
- FNDA:0,annotateLinks
1879
+ FNDA:0,(anonymous_2)
1880
+ FNDA:0,(anonymous_3)
1881
+ FNDA:0,(anonymous_4)
1882
+ FNDA:0,(anonymous_5)
1883
+ FNDA:0,(anonymous_6)
1884
+ FNDA:0,(anonymous_7)
1885
+ FNDA:0,(anonymous_8)
1216
1886
  DA:1,1
1217
- DA:2,1
1218
- DA:4,1
1219
- DA:8,0
1887
+ DA:3,1
1888
+ DA:4,0
1889
+ DA:5,0
1890
+ DA:8,1
1220
1891
  DA:9,0
1221
- DA:11,0
1222
- DA:12,0
1892
+ DA:12,1
1223
1893
  DA:13,0
1224
- DA:16,0
1225
- DA:17,0
1894
+ DA:15,0
1226
1895
  DA:19,0
1227
1896
  DA:20,0
1228
1897
  DA:22,0
1229
- DA:24,0
1230
- DA:25,0
1231
- DA:30,1
1232
- DA:39,0
1233
- DA:43,2
1234
- DA:45,2
1235
- DA:46,2
1898
+ DA:23,0
1899
+ DA:26,0
1900
+ DA:27,0
1901
+ DA:31,1
1902
+ DA:32,0
1903
+ DA:33,0
1904
+ DA:35,0
1905
+ DA:39,1
1906
+ DA:40,0
1907
+ DA:41,0
1908
+ DA:43,1
1909
+ DA:44,0
1910
+ DA:45,0
1911
+ DA:46,0
1912
+ DA:47,0
1913
+ DA:48,0
1236
1914
  DA:51,0
1237
- LF:21
1238
- LH:7
1239
- BRDA:12,0,0,0
1240
- BRDA:12,0,1,0
1241
- BRDA:12,1,0,0
1242
- BRDA:12,1,1,0
1243
- BRDA:16,2,0,0
1244
- BRDA:16,2,1,0
1245
- BRF:6
1915
+ DA:53,0
1916
+ DA:56,1
1917
+ DA:57,0
1918
+ DA:58,0
1919
+ DA:59,0
1920
+ DA:60,0
1921
+ DA:61,0
1922
+ DA:62,0
1923
+ DA:64,0
1924
+ DA:66,0
1925
+ DA:69,1
1926
+ DA:70,0
1927
+ DA:71,0
1928
+ DA:83,0
1929
+ DA:84,0
1930
+ DA:86,0
1931
+ DA:87,0
1932
+ DA:89,0
1933
+ DA:90,0
1934
+ DA:92,0
1935
+ DA:93,0
1936
+ DA:95,0
1937
+ DA:99,0
1938
+ DA:102,1
1939
+ DA:103,0
1940
+ LF:54
1941
+ LH:10
1942
+ BRDA:32,1,0,0
1943
+ BRDA:32,1,1,0
1944
+ BRDA:48,2,0,0
1945
+ BRDA:48,2,1,0
1946
+ BRDA:84,3,0,0
1947
+ BRDA:84,3,1,0
1948
+ BRDA:84,3,2,0
1949
+ BRDA:84,3,3,0
1950
+ BRF:8
1246
1951
  BRH:0
1247
1952
  end_of_record