docrev 0.10.1 → 0.11.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (167) hide show
  1. package/.gitattributes +1 -1
  2. package/CHANGELOG.md +184 -173
  3. package/PLAN-tables-and-postprocess.md +850 -850
  4. package/README.md +431 -431
  5. package/bin/rev.js +11 -11
  6. package/bin/rev.ts +145 -145
  7. package/completions/rev.bash +127 -127
  8. package/completions/rev.ps1 +210 -210
  9. package/completions/rev.zsh +207 -207
  10. package/dist/lib/anchor-match.d.ts +4 -2
  11. package/dist/lib/anchor-match.d.ts.map +1 -1
  12. package/dist/lib/anchor-match.js +52 -24
  13. package/dist/lib/anchor-match.js.map +1 -1
  14. package/dist/lib/annotations.d.ts +0 -6
  15. package/dist/lib/annotations.d.ts.map +1 -1
  16. package/dist/lib/annotations.js +26 -8
  17. package/dist/lib/annotations.js.map +1 -1
  18. package/dist/lib/build.d.ts.map +1 -1
  19. package/dist/lib/build.js +13 -10
  20. package/dist/lib/build.js.map +1 -1
  21. package/dist/lib/commands/build.d.ts.map +1 -1
  22. package/dist/lib/commands/build.js +5 -0
  23. package/dist/lib/commands/build.js.map +1 -1
  24. package/dist/lib/commands/doi.d.ts.map +1 -1
  25. package/dist/lib/commands/doi.js +14 -2
  26. package/dist/lib/commands/doi.js.map +1 -1
  27. package/dist/lib/commands/sync.d.ts.map +1 -1
  28. package/dist/lib/commands/sync.js +98 -107
  29. package/dist/lib/commands/sync.js.map +1 -1
  30. package/dist/lib/commands/utilities.js +164 -164
  31. package/dist/lib/commands/word-tools.js +8 -8
  32. package/dist/lib/comment-realign.d.ts +12 -21
  33. package/dist/lib/comment-realign.d.ts.map +1 -1
  34. package/dist/lib/comment-realign.js +40 -348
  35. package/dist/lib/comment-realign.js.map +1 -1
  36. package/dist/lib/dependencies.d.ts +10 -0
  37. package/dist/lib/dependencies.d.ts.map +1 -1
  38. package/dist/lib/dependencies.js +41 -9
  39. package/dist/lib/dependencies.js.map +1 -1
  40. package/dist/lib/doi.d.ts.map +1 -1
  41. package/dist/lib/doi.js +68 -80
  42. package/dist/lib/doi.js.map +1 -1
  43. package/dist/lib/errors.d.ts.map +1 -1
  44. package/dist/lib/errors.js +3 -1
  45. package/dist/lib/errors.js.map +1 -1
  46. package/dist/lib/grammar.js +3 -3
  47. package/dist/lib/import.d.ts +7 -4
  48. package/dist/lib/import.d.ts.map +1 -1
  49. package/dist/lib/import.js +58 -62
  50. package/dist/lib/import.js.map +1 -1
  51. package/dist/lib/macro-filter.lua +201 -201
  52. package/dist/lib/ooxml.d.ts +207 -0
  53. package/dist/lib/ooxml.d.ts.map +1 -0
  54. package/dist/lib/ooxml.js +634 -0
  55. package/dist/lib/ooxml.js.map +1 -0
  56. package/dist/lib/pdf-comments.js +44 -44
  57. package/dist/lib/plugins.js +57 -57
  58. package/dist/lib/pptx-color-filter.lua +37 -37
  59. package/dist/lib/pptx-themes.js +115 -115
  60. package/dist/lib/rate-limiter.d.ts +8 -0
  61. package/dist/lib/rate-limiter.d.ts.map +1 -1
  62. package/dist/lib/rate-limiter.js +41 -4
  63. package/dist/lib/rate-limiter.js.map +1 -1
  64. package/dist/lib/sections.d.ts.map +1 -1
  65. package/dist/lib/sections.js +5 -2
  66. package/dist/lib/sections.js.map +1 -1
  67. package/dist/lib/spelling.js +2 -2
  68. package/dist/lib/templates.js +387 -387
  69. package/dist/lib/themes.js +51 -51
  70. package/dist/lib/types.d.ts +9 -1
  71. package/dist/lib/types.d.ts.map +1 -1
  72. package/dist/lib/word-extraction.d.ts.map +1 -1
  73. package/dist/lib/word-extraction.js +48 -307
  74. package/dist/lib/word-extraction.js.map +1 -1
  75. package/dist/lib/word.d.ts.map +1 -1
  76. package/dist/lib/word.js +80 -175
  77. package/dist/lib/word.js.map +1 -1
  78. package/dist/lib/wordcomments.d.ts.map +1 -1
  79. package/dist/lib/wordcomments.js +53 -92
  80. package/dist/lib/wordcomments.js.map +1 -1
  81. package/docs-src/build.py +113 -113
  82. package/docs-src/extra.css +208 -208
  83. package/docs-src/md-to-html.lua +6 -6
  84. package/docs-src/template.html +116 -116
  85. package/eslint.config.js +27 -27
  86. package/lib/anchor-match.ts +307 -276
  87. package/lib/annotations.ts +664 -644
  88. package/lib/build.ts +1770 -1766
  89. package/lib/citations.ts +160 -160
  90. package/lib/commands/build.ts +860 -855
  91. package/lib/commands/citations.ts +515 -515
  92. package/lib/commands/comments.ts +1050 -1050
  93. package/lib/commands/context.ts +176 -176
  94. package/lib/commands/core.ts +309 -309
  95. package/lib/commands/doi.ts +451 -435
  96. package/lib/commands/file-ops.ts +372 -372
  97. package/lib/commands/history.ts +320 -320
  98. package/lib/commands/index.ts +87 -87
  99. package/lib/commands/init.ts +259 -259
  100. package/lib/commands/merge-resolve.ts +378 -378
  101. package/lib/commands/preview.ts +178 -178
  102. package/lib/commands/project-info.ts +244 -244
  103. package/lib/commands/quality.ts +517 -517
  104. package/lib/commands/response.ts +454 -454
  105. package/lib/commands/section-boundaries.ts +82 -82
  106. package/lib/commands/sections.ts +451 -451
  107. package/lib/commands/sync.ts +689 -709
  108. package/lib/commands/text-ops.ts +449 -449
  109. package/lib/commands/utilities.ts +448 -448
  110. package/lib/commands/verify-anchors.ts +272 -272
  111. package/lib/commands/word-tools.ts +340 -340
  112. package/lib/comment-realign.ts +99 -517
  113. package/lib/config.ts +84 -84
  114. package/lib/crossref.ts +781 -781
  115. package/lib/csl.ts +191 -191
  116. package/lib/dependencies.ts +132 -98
  117. package/lib/diff-engine.ts +465 -465
  118. package/lib/doi-cache.ts +115 -115
  119. package/lib/doi.ts +879 -897
  120. package/lib/equations.ts +506 -506
  121. package/lib/errors.ts +350 -346
  122. package/lib/format.ts +541 -541
  123. package/lib/git.ts +326 -326
  124. package/lib/grammar.ts +303 -303
  125. package/lib/image-registry.ts +180 -180
  126. package/lib/import.ts +906 -911
  127. package/lib/journals.ts +543 -543
  128. package/lib/macro-filter.lua +201 -201
  129. package/lib/macros.ts +273 -273
  130. package/lib/merge.ts +633 -633
  131. package/lib/ooxml.ts +768 -0
  132. package/lib/orcid.ts +144 -144
  133. package/lib/pdf-comments.ts +263 -263
  134. package/lib/pdf-import.ts +524 -524
  135. package/lib/plugins.ts +362 -362
  136. package/lib/postprocess.ts +188 -188
  137. package/lib/pptx-color-filter.lua +37 -37
  138. package/lib/pptx-template.ts +469 -469
  139. package/lib/pptx-themes.ts +483 -483
  140. package/lib/protect-restore.ts +520 -520
  141. package/lib/rate-limiter.ts +127 -94
  142. package/lib/response.ts +197 -197
  143. package/lib/restore-references.ts +240 -240
  144. package/lib/review.ts +327 -327
  145. package/lib/schema.ts +488 -488
  146. package/lib/scientific-words.ts +73 -73
  147. package/lib/sections.ts +428 -425
  148. package/lib/slides.ts +756 -756
  149. package/lib/spelling.ts +334 -334
  150. package/lib/templates.ts +526 -526
  151. package/lib/themes.ts +742 -742
  152. package/lib/trackchanges.ts +247 -247
  153. package/lib/tui.ts +450 -450
  154. package/lib/types.ts +558 -550
  155. package/lib/undo.ts +250 -250
  156. package/lib/utils.ts +69 -69
  157. package/lib/variables.ts +179 -179
  158. package/lib/word-extraction.ts +525 -806
  159. package/lib/word.ts +526 -643
  160. package/lib/wordcomments.ts +789 -840
  161. package/mkdocs.yml +64 -64
  162. package/package.json +137 -137
  163. package/scripts/postbuild.js +47 -47
  164. package/skill/REFERENCE.md +539 -539
  165. package/skill/SKILL.md +295 -295
  166. package/tsconfig.json +26 -26
  167. package/types/index.d.ts +525 -525
@@ -1,180 +1,180 @@
1
- /**
2
- * Image registry utilities for tracking figures and tables in markdown documents
3
- *
4
- * The registry maps figure/table labels and display numbers to source paths,
5
- * enabling Word import to match rendered figures back to original sources.
6
- */
7
-
8
- import * as fs from 'fs';
9
- import * as path from 'path';
10
-
11
- /**
12
- * Image registry entry
13
- */
14
- interface ImageEntry {
15
- caption: string;
16
- path: string;
17
- label: string | null;
18
- type: 'fig' | 'tbl';
19
- number?: string;
20
- }
21
-
22
- /**
23
- * Image registry
24
- */
25
- interface ImageRegistry {
26
- figures: ImageEntry[];
27
- byLabel: Map<string, ImageEntry>;
28
- byNumber: Map<string, ImageEntry>;
29
- byCaption: Map<string, ImageEntry>;
30
- }
31
-
32
- /**
33
- * Crossref registry info
34
- */
35
- interface CrossrefInfo {
36
- num: number;
37
- isSupp: boolean;
38
- }
39
-
40
- /**
41
- * Crossref registry
42
- */
43
- interface CrossrefRegistry {
44
- figures: Map<string, CrossrefInfo>;
45
- tables: Map<string, CrossrefInfo>;
46
- }
47
-
48
- /**
49
- * Saved registry data
50
- */
51
- interface RegistryData {
52
- version: number;
53
- created: string;
54
- figures: ImageEntry[];
55
- }
56
-
57
- /**
58
- * Pattern to extract markdown images with optional pandoc-crossref anchors
59
- * Captures: ![caption](path){#fig:label} or ![caption](path)
60
- * Groups: [1] = caption, [2] = path, [3] = label type (fig/tbl), [4] = label
61
- */
62
- export const IMAGE_PATTERN = /!\[([^\]]*)\]\(([^)]+)\)(?:\{#(fig|tbl):([^}]+)\})?/g;
63
-
64
- /**
65
- * Build image registry from markdown content
66
- * Maps figure labels and display numbers to source paths
67
- */
68
- export function buildImageRegistry(
69
- content: string,
70
- crossrefRegistry: CrossrefRegistry | null = null
71
- ): ImageRegistry {
72
- const figures: ImageEntry[] = [];
73
- const byLabel = new Map<string, ImageEntry>();
74
- const byNumber = new Map<string, ImageEntry>();
75
- const byCaption = new Map<string, ImageEntry>();
76
-
77
- IMAGE_PATTERN.lastIndex = 0;
78
- let match: RegExpExecArray | null;
79
-
80
- while ((match = IMAGE_PATTERN.exec(content)) !== null) {
81
- const caption = match[1];
82
- const imagePath = match[2];
83
- const labelType = match[3] as 'fig' | 'tbl' | undefined; // 'fig' or 'tbl' or undefined
84
- const label = match[4]; // label without prefix
85
-
86
- const entry: ImageEntry = {
87
- caption,
88
- path: imagePath,
89
- label: label || null,
90
- type: labelType || 'fig',
91
- };
92
-
93
- // Add display number if we have a crossref registry
94
- if (label && crossrefRegistry) {
95
- const info = crossrefRegistry.figures.get(label) || crossrefRegistry.tables.get(label);
96
- if (info) {
97
- entry.number = info.isSupp ? `S${info.num}` : `${info.num}`;
98
- byNumber.set(`${entry.type}:${entry.number}`, entry);
99
- }
100
- }
101
-
102
- figures.push(entry);
103
-
104
- if (label) {
105
- byLabel.set(`${labelType || 'fig'}:${label}`, entry);
106
- }
107
-
108
- // Index by first 50 chars of caption for fuzzy matching
109
- if (caption) {
110
- const captionKey = caption.slice(0, 50).toLowerCase().trim();
111
- byCaption.set(captionKey, entry);
112
- }
113
- }
114
-
115
- return { figures, byLabel, byNumber, byCaption };
116
- }
117
-
118
- /**
119
- * Write image registry to .rev directory
120
- */
121
- export function writeImageRegistry(directory: string, registry: ImageRegistry): string {
122
- const revDir = path.join(directory, '.rev');
123
- if (!fs.existsSync(revDir)) {
124
- fs.mkdirSync(revDir, { recursive: true });
125
- }
126
-
127
- // Convert Maps to objects for JSON serialization
128
- const data: RegistryData = {
129
- version: 1,
130
- created: new Date().toISOString(),
131
- figures: registry.figures,
132
- };
133
-
134
- const registryPath = path.join(revDir, 'image-registry.json');
135
- fs.writeFileSync(registryPath, JSON.stringify(data, null, 2), 'utf-8');
136
-
137
- return registryPath;
138
- }
139
-
140
- /**
141
- * Read image registry from .rev directory
142
- */
143
- export function readImageRegistry(directory: string): (ImageRegistry & RegistryData) | null {
144
- const registryPath = path.join(directory, '.rev', 'image-registry.json');
145
-
146
- if (!fs.existsSync(registryPath)) {
147
- return null;
148
- }
149
-
150
- try {
151
- const data = JSON.parse(fs.readFileSync(registryPath, 'utf-8')) as RegistryData;
152
-
153
- // Rebuild lookup maps from figures array
154
- const byLabel = new Map<string, ImageEntry>();
155
- const byNumber = new Map<string, ImageEntry>();
156
- const byCaption = new Map<string, ImageEntry>();
157
-
158
- for (const entry of data.figures || []) {
159
- if (entry.label) {
160
- byLabel.set(`${entry.type || 'fig'}:${entry.label}`, entry);
161
- }
162
- if (entry.number) {
163
- byNumber.set(`${entry.type || 'fig'}:${entry.number}`, entry);
164
- }
165
- if (entry.caption) {
166
- const captionKey = entry.caption.slice(0, 50).toLowerCase().trim();
167
- byCaption.set(captionKey, entry);
168
- }
169
- }
170
-
171
- return {
172
- ...data,
173
- byLabel,
174
- byNumber,
175
- byCaption,
176
- };
177
- } catch (err) {
178
- return null;
179
- }
180
- }
1
+ /**
2
+ * Image registry utilities for tracking figures and tables in markdown documents
3
+ *
4
+ * The registry maps figure/table labels and display numbers to source paths,
5
+ * enabling Word import to match rendered figures back to original sources.
6
+ */
7
+
8
+ import * as fs from 'fs';
9
+ import * as path from 'path';
10
+
11
+ /**
12
+ * Image registry entry
13
+ */
14
+ interface ImageEntry {
15
+ caption: string;
16
+ path: string;
17
+ label: string | null;
18
+ type: 'fig' | 'tbl';
19
+ number?: string;
20
+ }
21
+
22
+ /**
23
+ * Image registry
24
+ */
25
+ interface ImageRegistry {
26
+ figures: ImageEntry[];
27
+ byLabel: Map<string, ImageEntry>;
28
+ byNumber: Map<string, ImageEntry>;
29
+ byCaption: Map<string, ImageEntry>;
30
+ }
31
+
32
+ /**
33
+ * Crossref registry info
34
+ */
35
+ interface CrossrefInfo {
36
+ num: number;
37
+ isSupp: boolean;
38
+ }
39
+
40
+ /**
41
+ * Crossref registry
42
+ */
43
+ interface CrossrefRegistry {
44
+ figures: Map<string, CrossrefInfo>;
45
+ tables: Map<string, CrossrefInfo>;
46
+ }
47
+
48
+ /**
49
+ * Saved registry data
50
+ */
51
+ interface RegistryData {
52
+ version: number;
53
+ created: string;
54
+ figures: ImageEntry[];
55
+ }
56
+
57
+ /**
58
+ * Pattern to extract markdown images with optional pandoc-crossref anchors
59
+ * Captures: ![caption](path){#fig:label} or ![caption](path)
60
+ * Groups: [1] = caption, [2] = path, [3] = label type (fig/tbl), [4] = label
61
+ */
62
+ export const IMAGE_PATTERN = /!\[([^\]]*)\]\(([^)]+)\)(?:\{#(fig|tbl):([^}]+)\})?/g;
63
+
64
+ /**
65
+ * Build image registry from markdown content
66
+ * Maps figure labels and display numbers to source paths
67
+ */
68
+ export function buildImageRegistry(
69
+ content: string,
70
+ crossrefRegistry: CrossrefRegistry | null = null
71
+ ): ImageRegistry {
72
+ const figures: ImageEntry[] = [];
73
+ const byLabel = new Map<string, ImageEntry>();
74
+ const byNumber = new Map<string, ImageEntry>();
75
+ const byCaption = new Map<string, ImageEntry>();
76
+
77
+ IMAGE_PATTERN.lastIndex = 0;
78
+ let match: RegExpExecArray | null;
79
+
80
+ while ((match = IMAGE_PATTERN.exec(content)) !== null) {
81
+ const caption = match[1];
82
+ const imagePath = match[2];
83
+ const labelType = match[3] as 'fig' | 'tbl' | undefined; // 'fig' or 'tbl' or undefined
84
+ const label = match[4]; // label without prefix
85
+
86
+ const entry: ImageEntry = {
87
+ caption,
88
+ path: imagePath,
89
+ label: label || null,
90
+ type: labelType || 'fig',
91
+ };
92
+
93
+ // Add display number if we have a crossref registry
94
+ if (label && crossrefRegistry) {
95
+ const info = crossrefRegistry.figures.get(label) || crossrefRegistry.tables.get(label);
96
+ if (info) {
97
+ entry.number = info.isSupp ? `S${info.num}` : `${info.num}`;
98
+ byNumber.set(`${entry.type}:${entry.number}`, entry);
99
+ }
100
+ }
101
+
102
+ figures.push(entry);
103
+
104
+ if (label) {
105
+ byLabel.set(`${labelType || 'fig'}:${label}`, entry);
106
+ }
107
+
108
+ // Index by first 50 chars of caption for fuzzy matching
109
+ if (caption) {
110
+ const captionKey = caption.slice(0, 50).toLowerCase().trim();
111
+ byCaption.set(captionKey, entry);
112
+ }
113
+ }
114
+
115
+ return { figures, byLabel, byNumber, byCaption };
116
+ }
117
+
118
+ /**
119
+ * Write image registry to .rev directory
120
+ */
121
+ export function writeImageRegistry(directory: string, registry: ImageRegistry): string {
122
+ const revDir = path.join(directory, '.rev');
123
+ if (!fs.existsSync(revDir)) {
124
+ fs.mkdirSync(revDir, { recursive: true });
125
+ }
126
+
127
+ // Convert Maps to objects for JSON serialization
128
+ const data: RegistryData = {
129
+ version: 1,
130
+ created: new Date().toISOString(),
131
+ figures: registry.figures,
132
+ };
133
+
134
+ const registryPath = path.join(revDir, 'image-registry.json');
135
+ fs.writeFileSync(registryPath, JSON.stringify(data, null, 2), 'utf-8');
136
+
137
+ return registryPath;
138
+ }
139
+
140
+ /**
141
+ * Read image registry from .rev directory
142
+ */
143
+ export function readImageRegistry(directory: string): (ImageRegistry & RegistryData) | null {
144
+ const registryPath = path.join(directory, '.rev', 'image-registry.json');
145
+
146
+ if (!fs.existsSync(registryPath)) {
147
+ return null;
148
+ }
149
+
150
+ try {
151
+ const data = JSON.parse(fs.readFileSync(registryPath, 'utf-8')) as RegistryData;
152
+
153
+ // Rebuild lookup maps from figures array
154
+ const byLabel = new Map<string, ImageEntry>();
155
+ const byNumber = new Map<string, ImageEntry>();
156
+ const byCaption = new Map<string, ImageEntry>();
157
+
158
+ for (const entry of data.figures || []) {
159
+ if (entry.label) {
160
+ byLabel.set(`${entry.type || 'fig'}:${entry.label}`, entry);
161
+ }
162
+ if (entry.number) {
163
+ byNumber.set(`${entry.type || 'fig'}:${entry.number}`, entry);
164
+ }
165
+ if (entry.caption) {
166
+ const captionKey = entry.caption.slice(0, 50).toLowerCase().trim();
167
+ byCaption.set(captionKey, entry);
168
+ }
169
+ }
170
+
171
+ return {
172
+ ...data,
173
+ byLabel,
174
+ byNumber,
175
+ byCaption,
176
+ };
177
+ } catch (err) {
178
+ return null;
179
+ }
180
+ }