docrev 0.10.1 → 0.11.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (167) hide show
  1. package/.gitattributes +1 -1
  2. package/CHANGELOG.md +184 -173
  3. package/PLAN-tables-and-postprocess.md +850 -850
  4. package/README.md +431 -431
  5. package/bin/rev.js +11 -11
  6. package/bin/rev.ts +145 -145
  7. package/completions/rev.bash +127 -127
  8. package/completions/rev.ps1 +210 -210
  9. package/completions/rev.zsh +207 -207
  10. package/dist/lib/anchor-match.d.ts +4 -2
  11. package/dist/lib/anchor-match.d.ts.map +1 -1
  12. package/dist/lib/anchor-match.js +52 -24
  13. package/dist/lib/anchor-match.js.map +1 -1
  14. package/dist/lib/annotations.d.ts +0 -6
  15. package/dist/lib/annotations.d.ts.map +1 -1
  16. package/dist/lib/annotations.js +26 -8
  17. package/dist/lib/annotations.js.map +1 -1
  18. package/dist/lib/build.d.ts.map +1 -1
  19. package/dist/lib/build.js +13 -10
  20. package/dist/lib/build.js.map +1 -1
  21. package/dist/lib/commands/build.d.ts.map +1 -1
  22. package/dist/lib/commands/build.js +5 -0
  23. package/dist/lib/commands/build.js.map +1 -1
  24. package/dist/lib/commands/doi.d.ts.map +1 -1
  25. package/dist/lib/commands/doi.js +14 -2
  26. package/dist/lib/commands/doi.js.map +1 -1
  27. package/dist/lib/commands/sync.d.ts.map +1 -1
  28. package/dist/lib/commands/sync.js +98 -107
  29. package/dist/lib/commands/sync.js.map +1 -1
  30. package/dist/lib/commands/utilities.js +164 -164
  31. package/dist/lib/commands/word-tools.js +8 -8
  32. package/dist/lib/comment-realign.d.ts +12 -21
  33. package/dist/lib/comment-realign.d.ts.map +1 -1
  34. package/dist/lib/comment-realign.js +40 -348
  35. package/dist/lib/comment-realign.js.map +1 -1
  36. package/dist/lib/dependencies.d.ts +10 -0
  37. package/dist/lib/dependencies.d.ts.map +1 -1
  38. package/dist/lib/dependencies.js +41 -9
  39. package/dist/lib/dependencies.js.map +1 -1
  40. package/dist/lib/doi.d.ts.map +1 -1
  41. package/dist/lib/doi.js +68 -80
  42. package/dist/lib/doi.js.map +1 -1
  43. package/dist/lib/errors.d.ts.map +1 -1
  44. package/dist/lib/errors.js +3 -1
  45. package/dist/lib/errors.js.map +1 -1
  46. package/dist/lib/grammar.js +3 -3
  47. package/dist/lib/import.d.ts +7 -4
  48. package/dist/lib/import.d.ts.map +1 -1
  49. package/dist/lib/import.js +58 -62
  50. package/dist/lib/import.js.map +1 -1
  51. package/dist/lib/macro-filter.lua +201 -201
  52. package/dist/lib/ooxml.d.ts +207 -0
  53. package/dist/lib/ooxml.d.ts.map +1 -0
  54. package/dist/lib/ooxml.js +634 -0
  55. package/dist/lib/ooxml.js.map +1 -0
  56. package/dist/lib/pdf-comments.js +44 -44
  57. package/dist/lib/plugins.js +57 -57
  58. package/dist/lib/pptx-color-filter.lua +37 -37
  59. package/dist/lib/pptx-themes.js +115 -115
  60. package/dist/lib/rate-limiter.d.ts +8 -0
  61. package/dist/lib/rate-limiter.d.ts.map +1 -1
  62. package/dist/lib/rate-limiter.js +41 -4
  63. package/dist/lib/rate-limiter.js.map +1 -1
  64. package/dist/lib/sections.d.ts.map +1 -1
  65. package/dist/lib/sections.js +5 -2
  66. package/dist/lib/sections.js.map +1 -1
  67. package/dist/lib/spelling.js +2 -2
  68. package/dist/lib/templates.js +387 -387
  69. package/dist/lib/themes.js +51 -51
  70. package/dist/lib/types.d.ts +9 -1
  71. package/dist/lib/types.d.ts.map +1 -1
  72. package/dist/lib/word-extraction.d.ts.map +1 -1
  73. package/dist/lib/word-extraction.js +48 -307
  74. package/dist/lib/word-extraction.js.map +1 -1
  75. package/dist/lib/word.d.ts.map +1 -1
  76. package/dist/lib/word.js +80 -175
  77. package/dist/lib/word.js.map +1 -1
  78. package/dist/lib/wordcomments.d.ts.map +1 -1
  79. package/dist/lib/wordcomments.js +53 -92
  80. package/dist/lib/wordcomments.js.map +1 -1
  81. package/docs-src/build.py +113 -113
  82. package/docs-src/extra.css +208 -208
  83. package/docs-src/md-to-html.lua +6 -6
  84. package/docs-src/template.html +116 -116
  85. package/eslint.config.js +27 -27
  86. package/lib/anchor-match.ts +307 -276
  87. package/lib/annotations.ts +664 -644
  88. package/lib/build.ts +1770 -1766
  89. package/lib/citations.ts +160 -160
  90. package/lib/commands/build.ts +860 -855
  91. package/lib/commands/citations.ts +515 -515
  92. package/lib/commands/comments.ts +1050 -1050
  93. package/lib/commands/context.ts +176 -176
  94. package/lib/commands/core.ts +309 -309
  95. package/lib/commands/doi.ts +451 -435
  96. package/lib/commands/file-ops.ts +372 -372
  97. package/lib/commands/history.ts +320 -320
  98. package/lib/commands/index.ts +87 -87
  99. package/lib/commands/init.ts +259 -259
  100. package/lib/commands/merge-resolve.ts +378 -378
  101. package/lib/commands/preview.ts +178 -178
  102. package/lib/commands/project-info.ts +244 -244
  103. package/lib/commands/quality.ts +517 -517
  104. package/lib/commands/response.ts +454 -454
  105. package/lib/commands/section-boundaries.ts +82 -82
  106. package/lib/commands/sections.ts +451 -451
  107. package/lib/commands/sync.ts +689 -709
  108. package/lib/commands/text-ops.ts +449 -449
  109. package/lib/commands/utilities.ts +448 -448
  110. package/lib/commands/verify-anchors.ts +272 -272
  111. package/lib/commands/word-tools.ts +340 -340
  112. package/lib/comment-realign.ts +99 -517
  113. package/lib/config.ts +84 -84
  114. package/lib/crossref.ts +781 -781
  115. package/lib/csl.ts +191 -191
  116. package/lib/dependencies.ts +132 -98
  117. package/lib/diff-engine.ts +465 -465
  118. package/lib/doi-cache.ts +115 -115
  119. package/lib/doi.ts +879 -897
  120. package/lib/equations.ts +506 -506
  121. package/lib/errors.ts +350 -346
  122. package/lib/format.ts +541 -541
  123. package/lib/git.ts +326 -326
  124. package/lib/grammar.ts +303 -303
  125. package/lib/image-registry.ts +180 -180
  126. package/lib/import.ts +906 -911
  127. package/lib/journals.ts +543 -543
  128. package/lib/macro-filter.lua +201 -201
  129. package/lib/macros.ts +273 -273
  130. package/lib/merge.ts +633 -633
  131. package/lib/ooxml.ts +768 -0
  132. package/lib/orcid.ts +144 -144
  133. package/lib/pdf-comments.ts +263 -263
  134. package/lib/pdf-import.ts +524 -524
  135. package/lib/plugins.ts +362 -362
  136. package/lib/postprocess.ts +188 -188
  137. package/lib/pptx-color-filter.lua +37 -37
  138. package/lib/pptx-template.ts +469 -469
  139. package/lib/pptx-themes.ts +483 -483
  140. package/lib/protect-restore.ts +520 -520
  141. package/lib/rate-limiter.ts +127 -94
  142. package/lib/response.ts +197 -197
  143. package/lib/restore-references.ts +240 -240
  144. package/lib/review.ts +327 -327
  145. package/lib/schema.ts +488 -488
  146. package/lib/scientific-words.ts +73 -73
  147. package/lib/sections.ts +428 -425
  148. package/lib/slides.ts +756 -756
  149. package/lib/spelling.ts +334 -334
  150. package/lib/templates.ts +526 -526
  151. package/lib/themes.ts +742 -742
  152. package/lib/trackchanges.ts +247 -247
  153. package/lib/tui.ts +450 -450
  154. package/lib/types.ts +558 -550
  155. package/lib/undo.ts +250 -250
  156. package/lib/utils.ts +69 -69
  157. package/lib/variables.ts +179 -179
  158. package/lib/word-extraction.ts +525 -806
  159. package/lib/word.ts +526 -643
  160. package/lib/wordcomments.ts +789 -840
  161. package/mkdocs.yml +64 -64
  162. package/package.json +137 -137
  163. package/scripts/postbuild.js +47 -47
  164. package/skill/REFERENCE.md +539 -539
  165. package/skill/SKILL.md +295 -295
  166. package/tsconfig.json +26 -26
  167. package/types/index.d.ts +525 -525
@@ -1,372 +1,372 @@
1
- /**
2
- * File operation commands: backup, archive, export, clean
3
- *
4
- * Commands that create, move, or delete project files.
5
- */
6
-
7
- import type { Command } from 'commander';
8
- import {
9
- chalk,
10
- fs,
11
- path,
12
- fmt,
13
- findFiles,
14
- loadBuildConfig,
15
- } from './context.js';
16
-
17
- // Use the actual BuildConfig from build.ts which allows string|Author[]
18
- type BuildConfig = ReturnType<typeof loadBuildConfig>;
19
-
20
- interface ZipLike {
21
- addLocalFile(localPath: string, zipPath?: string): void;
22
- }
23
-
24
- /**
25
- * Recursively add directory contents to a zip archive, filtering by predicate
26
- */
27
- function addDirToZip(
28
- zip: ZipLike,
29
- dir: string,
30
- shouldInclude: (name: string) => boolean,
31
- zipPath = '',
32
- ): void {
33
- const entries = fs.readdirSync(dir, { withFileTypes: true });
34
- for (const entry of entries) {
35
- const fullPath = path.join(dir, entry.name);
36
- const entryZipPath = path.join(zipPath, entry.name);
37
-
38
- if (!shouldInclude(entry.name)) continue;
39
-
40
- if (entry.isDirectory()) {
41
- addDirToZip(zip, fullPath, shouldInclude, entryZipPath);
42
- } else {
43
- zip.addLocalFile(fullPath, zipPath || undefined);
44
- }
45
- }
46
- }
47
-
48
- // Options interfaces
49
- interface BackupOptions {
50
- name?: string;
51
- output?: string;
52
- }
53
-
54
- interface ArchiveOptions {
55
- dir?: string;
56
- by?: string;
57
- rename?: boolean;
58
- dryRun?: boolean;
59
- }
60
-
61
- interface ExportOptions {
62
- output?: string;
63
- includeOutput?: boolean;
64
- }
65
-
66
- interface CleanOptions {
67
- dryRun?: boolean;
68
- all?: boolean;
69
- }
70
-
71
- /**
72
- * Register file-ops commands with the program
73
- */
74
- export function register(program: Command): void {
75
- // ==========================================================================
76
- // BACKUP command - Timestamped project backup
77
- // ==========================================================================
78
-
79
- program
80
- .command('backup')
81
- .description('Create timestamped project backup')
82
- .option('-n, --name <name>', 'Custom backup name')
83
- .option('-o, --output <dir>', 'Output directory', '.')
84
- .action(async (options: BackupOptions) => {
85
- const { default: AdmZip } = await import('adm-zip');
86
- const zip = new AdmZip();
87
-
88
- const date = new Date().toISOString().slice(0, 10);
89
- const name = options.name || `backup-${date}`;
90
- const outputPath = path.join(options.output || '.', `${name}.zip`);
91
-
92
- // Files to exclude
93
- const excludePatterns = [
94
- 'node_modules', '.git', '.DS_Store', '*.zip',
95
- 'paper.md' // Generated file
96
- ];
97
-
98
- const shouldInclude = (file: string): boolean => {
99
- for (const pattern of excludePatterns) {
100
- if (file.includes(pattern.replace('*', ''))) return false;
101
- }
102
- return true;
103
- };
104
-
105
- addDirToZip(zip, '.', shouldInclude);
106
-
107
- zip.writeZip(outputPath);
108
- console.log(fmt.status('success', `Backup created: ${outputPath}`));
109
- });
110
-
111
- // ==========================================================================
112
- // ARCHIVE command - Archive reviewer docx files
113
- // ==========================================================================
114
-
115
- program
116
- .command('archive')
117
- .description('Move reviewer .docx files to archive folder')
118
- .argument('[files...]', 'Specific files to archive (default: all .docx)')
119
- .option('-d, --dir <folder>', 'Archive folder name', 'archive')
120
- .option('--by <name>', 'Reviewer name (auto-detected if single commenter)')
121
- .option('--no-rename', 'Keep original filenames')
122
- .option('--dry-run', 'Preview without moving files')
123
- .action(async (files: string[] | undefined, options: ArchiveOptions) => {
124
- const { extractWordComments } = await import('../import.js');
125
- const { default: YAML } = await import('yaml');
126
-
127
- // Find docx files to archive
128
- let docxFiles = files && files.length > 0
129
- ? files.filter(f => f.endsWith('.docx') && fs.existsSync(f))
130
- : findFiles('.docx');
131
-
132
- // Exclude our own build outputs
133
- let projectSlug: string | null = null;
134
- const configPath = path.join(process.cwd(), 'rev.yaml');
135
- if (fs.existsSync(configPath)) {
136
- try {
137
- const config = YAML.parse(fs.readFileSync(configPath, 'utf-8'));
138
- if (config.title) {
139
- projectSlug = config.title
140
- .toLowerCase()
141
- .replace(/[^a-z0-9]+/g, '-')
142
- .replace(/^-|-$/g, '')
143
- .slice(0, 50);
144
- }
145
- } catch (e) {
146
- // Ignore config errors
147
- }
148
- }
149
-
150
- // Filter out build outputs
151
- if (projectSlug && (!files || files.length === 0)) {
152
- const buildPatterns = [
153
- `${projectSlug}.docx`,
154
- `${projectSlug}_comments.docx`,
155
- `${projectSlug}-changes.docx`,
156
- 'paper.docx',
157
- 'paper_comments.docx',
158
- 'paper-changes.docx',
159
- ];
160
- const excluded: string[] = [];
161
- docxFiles = docxFiles.filter(f => {
162
- const base = path.basename(f).toLowerCase();
163
- const isBuilt = buildPatterns.includes(base);
164
- if (isBuilt) excluded.push(f);
165
- return !isBuilt;
166
- });
167
- if (excluded.length > 0) {
168
- console.log(chalk.dim(` Skipping build outputs: ${excluded.join(', ')}`));
169
- console.log();
170
- }
171
- }
172
-
173
- if (docxFiles.length === 0) {
174
- console.log(fmt.status('info', 'No .docx files to archive.'));
175
- return;
176
- }
177
-
178
- const projectTitle = projectSlug;
179
-
180
- // Create archive folder
181
- const archiveDir = path.resolve(options.dir || 'archive');
182
- if (!options.dryRun && !fs.existsSync(archiveDir)) {
183
- fs.mkdirSync(archiveDir, { recursive: true });
184
- }
185
-
186
- console.log(fmt.header('Archive'));
187
- console.log();
188
-
189
- const moved: string[] = [];
190
- for (const file of docxFiles) {
191
- const stat = fs.statSync(file);
192
- const mtime = stat.mtime;
193
- const timestamp = mtime.toISOString().slice(0, 19).replace(/[-:]/g, '').replace('T', '_');
194
-
195
- // Determine reviewer name
196
- let reviewer: string | null = options.by || null;
197
- if (!reviewer && options.rename !== false) {
198
- try {
199
- const comments = await extractWordComments(file);
200
- const authors = [...new Set(comments.map(c => c.author).filter(a => a && a !== 'Unknown'))];
201
- if (authors.length === 1) {
202
- reviewer = authors[0].replace(/[^a-zA-Z0-9]/g, '-').replace(/^-|-$/g, '');
203
- }
204
- } catch (e) {
205
- // Ignore extraction errors
206
- }
207
- }
208
-
209
- // Generate new name
210
- let newName: string;
211
- if (options.rename === false) {
212
- newName = path.basename(file);
213
- } else {
214
- const base = path.basename(file, '.docx');
215
- if (/^\d{8}_\d{6}_/.test(base)) {
216
- newName = path.basename(file);
217
- } else {
218
- const namePart = projectTitle || base;
219
- if (reviewer) {
220
- newName = `${timestamp}_${reviewer}_${namePart}.docx`;
221
- } else {
222
- newName = `${timestamp}_${namePart}.docx`;
223
- }
224
- }
225
- }
226
-
227
- const destPath = path.join(archiveDir, newName);
228
-
229
- if (options.dryRun) {
230
- console.log(` ${chalk.dim(file)} → ${chalk.cyan(path.join(options.dir || 'archive', newName))}`);
231
- } else {
232
- // Handle name collision
233
- let finalPath = destPath;
234
- let counter = 1;
235
- while (fs.existsSync(finalPath)) {
236
- const ext = path.extname(newName);
237
- const base = path.basename(newName, ext);
238
- finalPath = path.join(archiveDir, `${base}_${counter}${ext}`);
239
- counter++;
240
- }
241
- fs.renameSync(file, finalPath);
242
- console.log(` ${chalk.dim(file)} → ${chalk.green(path.relative(process.cwd(), finalPath))}`);
243
- }
244
- moved.push(file);
245
- }
246
-
247
- console.log();
248
- if (options.dryRun) {
249
- console.log(fmt.status('info', `Would archive ${moved.length} file(s). Run without --dry-run to proceed.`));
250
- } else {
251
- console.log(fmt.status('success', `Archived ${moved.length} file(s) to ${options.dir || 'archive'}/`));
252
- }
253
- });
254
-
255
- // ==========================================================================
256
- // EXPORT command - Export project as distributable zip
257
- // ==========================================================================
258
-
259
- program
260
- .command('export')
261
- .description('Export project as distributable zip')
262
- .option('-o, --output <file>', 'Output filename')
263
- .option('--include-output', 'Include built PDF/DOCX files')
264
- .action(async (options: ExportOptions) => {
265
- const { default: AdmZip } = await import('adm-zip');
266
- const { build } = await import('../build.js');
267
-
268
- let config: Partial<BuildConfig> = {};
269
- try {
270
- config = loadBuildConfig('.') || {};
271
- } catch {
272
- // Not in a rev project, that's ok
273
- }
274
-
275
- // Build first if including output
276
- if (options.includeOutput) {
277
- console.log(chalk.dim('Building documents...'));
278
- await build('.', ['pdf', 'docx']);
279
- }
280
-
281
- const zip = new AdmZip();
282
- const projectName = config.title?.replace(/[^a-zA-Z0-9]/g, '-').toLowerCase() || 'project';
283
- const outputPath = options.output || `${projectName}-export.zip`;
284
-
285
- const exclude = ['node_modules', '.git', '.DS_Store', '*.zip'];
286
-
287
- const shouldInclude = (name: string): boolean => {
288
- if (!options.includeOutput && (name.endsWith('.pdf') || name.endsWith('.docx'))) {
289
- return false;
290
- }
291
- for (const pattern of exclude) {
292
- if (name === pattern || name.includes(pattern.replace('*', ''))) return false;
293
- }
294
- return true;
295
- };
296
-
297
- addDirToZip(zip, '.', shouldInclude);
298
-
299
- zip.writeZip(outputPath);
300
- console.log(fmt.status('success', `Exported: ${outputPath}`));
301
- });
302
-
303
- // ==========================================================================
304
- // CLEAN command - Remove generated files
305
- // ==========================================================================
306
-
307
- program
308
- .command('clean')
309
- .description('Remove generated files (paper.md, PDFs, DOCXs)')
310
- .option('-n, --dry-run', 'Show what would be deleted without deleting')
311
- .option('--all', 'Also remove backup and export zips')
312
- .action((options: CleanOptions) => {
313
- let config: Partial<BuildConfig> = {};
314
- try {
315
- config = loadBuildConfig('.') || {};
316
- } catch {
317
- // Not in a rev project, that's ok
318
- }
319
-
320
- const projectName = config.title?.toLowerCase().replace(/\s+/g, '-') || 'paper';
321
-
322
- // Files to clean
323
- const patterns = [
324
- 'paper.md',
325
- '*.pdf',
326
- `${projectName}.docx`,
327
- `${projectName}.pdf`,
328
- `${projectName}.tex`,
329
- '.paper-*.md', // Temp build files
330
- ];
331
-
332
- if (options.all) {
333
- patterns.push('*.zip', 'backup-*.zip', '*-export.zip');
334
- }
335
-
336
- const toDelete: string[] = [];
337
-
338
- for (const pattern of patterns) {
339
- if (pattern.includes('*')) {
340
- const regex = new RegExp('^' + pattern.replace(/\./g, '\\.').replace(/\*/g, '.*') + '$');
341
- const files = fs.readdirSync('.').filter(f => regex.test(f));
342
- toDelete.push(...files);
343
- } else if (fs.existsSync(pattern)) {
344
- toDelete.push(pattern);
345
- }
346
- }
347
-
348
- if (toDelete.length === 0) {
349
- console.log(chalk.dim('No generated files to clean.'));
350
- return;
351
- }
352
-
353
- console.log(fmt.header('Clean'));
354
- console.log();
355
-
356
- for (const file of toDelete) {
357
- if (options.dryRun) {
358
- console.log(chalk.dim(` Would delete: ${file}`));
359
- } else {
360
- fs.unlinkSync(file);
361
- console.log(chalk.red(` Deleted: ${file}`));
362
- }
363
- }
364
-
365
- console.log();
366
- if (options.dryRun) {
367
- console.log(chalk.dim(`Would delete ${toDelete.length} file(s). Run without --dry-run to delete.`));
368
- } else {
369
- console.log(fmt.status('success', `Cleaned ${toDelete.length} file(s)`));
370
- }
371
- });
372
- }
1
+ /**
2
+ * File operation commands: backup, archive, export, clean
3
+ *
4
+ * Commands that create, move, or delete project files.
5
+ */
6
+
7
+ import type { Command } from 'commander';
8
+ import {
9
+ chalk,
10
+ fs,
11
+ path,
12
+ fmt,
13
+ findFiles,
14
+ loadBuildConfig,
15
+ } from './context.js';
16
+
17
+ // Use the actual BuildConfig from build.ts which allows string|Author[]
18
+ type BuildConfig = ReturnType<typeof loadBuildConfig>;
19
+
20
+ interface ZipLike {
21
+ addLocalFile(localPath: string, zipPath?: string): void;
22
+ }
23
+
24
+ /**
25
+ * Recursively add directory contents to a zip archive, filtering by predicate
26
+ */
27
+ function addDirToZip(
28
+ zip: ZipLike,
29
+ dir: string,
30
+ shouldInclude: (name: string) => boolean,
31
+ zipPath = '',
32
+ ): void {
33
+ const entries = fs.readdirSync(dir, { withFileTypes: true });
34
+ for (const entry of entries) {
35
+ const fullPath = path.join(dir, entry.name);
36
+ const entryZipPath = path.join(zipPath, entry.name);
37
+
38
+ if (!shouldInclude(entry.name)) continue;
39
+
40
+ if (entry.isDirectory()) {
41
+ addDirToZip(zip, fullPath, shouldInclude, entryZipPath);
42
+ } else {
43
+ zip.addLocalFile(fullPath, zipPath || undefined);
44
+ }
45
+ }
46
+ }
47
+
48
+ // Options interfaces
49
+ interface BackupOptions {
50
+ name?: string;
51
+ output?: string;
52
+ }
53
+
54
+ interface ArchiveOptions {
55
+ dir?: string;
56
+ by?: string;
57
+ rename?: boolean;
58
+ dryRun?: boolean;
59
+ }
60
+
61
+ interface ExportOptions {
62
+ output?: string;
63
+ includeOutput?: boolean;
64
+ }
65
+
66
+ interface CleanOptions {
67
+ dryRun?: boolean;
68
+ all?: boolean;
69
+ }
70
+
71
+ /**
72
+ * Register file-ops commands with the program
73
+ */
74
+ export function register(program: Command): void {
75
+ // ==========================================================================
76
+ // BACKUP command - Timestamped project backup
77
+ // ==========================================================================
78
+
79
+ program
80
+ .command('backup')
81
+ .description('Create timestamped project backup')
82
+ .option('-n, --name <name>', 'Custom backup name')
83
+ .option('-o, --output <dir>', 'Output directory', '.')
84
+ .action(async (options: BackupOptions) => {
85
+ const { default: AdmZip } = await import('adm-zip');
86
+ const zip = new AdmZip();
87
+
88
+ const date = new Date().toISOString().slice(0, 10);
89
+ const name = options.name || `backup-${date}`;
90
+ const outputPath = path.join(options.output || '.', `${name}.zip`);
91
+
92
+ // Files to exclude
93
+ const excludePatterns = [
94
+ 'node_modules', '.git', '.DS_Store', '*.zip',
95
+ 'paper.md' // Generated file
96
+ ];
97
+
98
+ const shouldInclude = (file: string): boolean => {
99
+ for (const pattern of excludePatterns) {
100
+ if (file.includes(pattern.replace('*', ''))) return false;
101
+ }
102
+ return true;
103
+ };
104
+
105
+ addDirToZip(zip, '.', shouldInclude);
106
+
107
+ zip.writeZip(outputPath);
108
+ console.log(fmt.status('success', `Backup created: ${outputPath}`));
109
+ });
110
+
111
+ // ==========================================================================
112
+ // ARCHIVE command - Archive reviewer docx files
113
+ // ==========================================================================
114
+
115
+ program
116
+ .command('archive')
117
+ .description('Move reviewer .docx files to archive folder')
118
+ .argument('[files...]', 'Specific files to archive (default: all .docx)')
119
+ .option('-d, --dir <folder>', 'Archive folder name', 'archive')
120
+ .option('--by <name>', 'Reviewer name (auto-detected if single commenter)')
121
+ .option('--no-rename', 'Keep original filenames')
122
+ .option('--dry-run', 'Preview without moving files')
123
+ .action(async (files: string[] | undefined, options: ArchiveOptions) => {
124
+ const { extractWordComments } = await import('../import.js');
125
+ const { default: YAML } = await import('yaml');
126
+
127
+ // Find docx files to archive
128
+ let docxFiles = files && files.length > 0
129
+ ? files.filter(f => f.endsWith('.docx') && fs.existsSync(f))
130
+ : findFiles('.docx');
131
+
132
+ // Exclude our own build outputs
133
+ let projectSlug: string | null = null;
134
+ const configPath = path.join(process.cwd(), 'rev.yaml');
135
+ if (fs.existsSync(configPath)) {
136
+ try {
137
+ const config = YAML.parse(fs.readFileSync(configPath, 'utf-8'));
138
+ if (config.title) {
139
+ projectSlug = config.title
140
+ .toLowerCase()
141
+ .replace(/[^a-z0-9]+/g, '-')
142
+ .replace(/^-|-$/g, '')
143
+ .slice(0, 50);
144
+ }
145
+ } catch (e) {
146
+ // Ignore config errors
147
+ }
148
+ }
149
+
150
+ // Filter out build outputs
151
+ if (projectSlug && (!files || files.length === 0)) {
152
+ const buildPatterns = [
153
+ `${projectSlug}.docx`,
154
+ `${projectSlug}_comments.docx`,
155
+ `${projectSlug}-changes.docx`,
156
+ 'paper.docx',
157
+ 'paper_comments.docx',
158
+ 'paper-changes.docx',
159
+ ];
160
+ const excluded: string[] = [];
161
+ docxFiles = docxFiles.filter(f => {
162
+ const base = path.basename(f).toLowerCase();
163
+ const isBuilt = buildPatterns.includes(base);
164
+ if (isBuilt) excluded.push(f);
165
+ return !isBuilt;
166
+ });
167
+ if (excluded.length > 0) {
168
+ console.log(chalk.dim(` Skipping build outputs: ${excluded.join(', ')}`));
169
+ console.log();
170
+ }
171
+ }
172
+
173
+ if (docxFiles.length === 0) {
174
+ console.log(fmt.status('info', 'No .docx files to archive.'));
175
+ return;
176
+ }
177
+
178
+ const projectTitle = projectSlug;
179
+
180
+ // Create archive folder
181
+ const archiveDir = path.resolve(options.dir || 'archive');
182
+ if (!options.dryRun && !fs.existsSync(archiveDir)) {
183
+ fs.mkdirSync(archiveDir, { recursive: true });
184
+ }
185
+
186
+ console.log(fmt.header('Archive'));
187
+ console.log();
188
+
189
+ const moved: string[] = [];
190
+ for (const file of docxFiles) {
191
+ const stat = fs.statSync(file);
192
+ const mtime = stat.mtime;
193
+ const timestamp = mtime.toISOString().slice(0, 19).replace(/[-:]/g, '').replace('T', '_');
194
+
195
+ // Determine reviewer name
196
+ let reviewer: string | null = options.by || null;
197
+ if (!reviewer && options.rename !== false) {
198
+ try {
199
+ const comments = await extractWordComments(file);
200
+ const authors = [...new Set(comments.map(c => c.author).filter(a => a && a !== 'Unknown'))];
201
+ if (authors.length === 1) {
202
+ reviewer = authors[0].replace(/[^a-zA-Z0-9]/g, '-').replace(/^-|-$/g, '');
203
+ }
204
+ } catch (e) {
205
+ // Ignore extraction errors
206
+ }
207
+ }
208
+
209
+ // Generate new name
210
+ let newName: string;
211
+ if (options.rename === false) {
212
+ newName = path.basename(file);
213
+ } else {
214
+ const base = path.basename(file, '.docx');
215
+ if (/^\d{8}_\d{6}_/.test(base)) {
216
+ newName = path.basename(file);
217
+ } else {
218
+ const namePart = projectTitle || base;
219
+ if (reviewer) {
220
+ newName = `${timestamp}_${reviewer}_${namePart}.docx`;
221
+ } else {
222
+ newName = `${timestamp}_${namePart}.docx`;
223
+ }
224
+ }
225
+ }
226
+
227
+ const destPath = path.join(archiveDir, newName);
228
+
229
+ if (options.dryRun) {
230
+ console.log(` ${chalk.dim(file)} → ${chalk.cyan(path.join(options.dir || 'archive', newName))}`);
231
+ } else {
232
+ // Handle name collision
233
+ let finalPath = destPath;
234
+ let counter = 1;
235
+ while (fs.existsSync(finalPath)) {
236
+ const ext = path.extname(newName);
237
+ const base = path.basename(newName, ext);
238
+ finalPath = path.join(archiveDir, `${base}_${counter}${ext}`);
239
+ counter++;
240
+ }
241
+ fs.renameSync(file, finalPath);
242
+ console.log(` ${chalk.dim(file)} → ${chalk.green(path.relative(process.cwd(), finalPath))}`);
243
+ }
244
+ moved.push(file);
245
+ }
246
+
247
+ console.log();
248
+ if (options.dryRun) {
249
+ console.log(fmt.status('info', `Would archive ${moved.length} file(s). Run without --dry-run to proceed.`));
250
+ } else {
251
+ console.log(fmt.status('success', `Archived ${moved.length} file(s) to ${options.dir || 'archive'}/`));
252
+ }
253
+ });
254
+
255
+ // ==========================================================================
256
+ // EXPORT command - Export project as distributable zip
257
+ // ==========================================================================
258
+
259
+ program
260
+ .command('export')
261
+ .description('Export project as distributable zip')
262
+ .option('-o, --output <file>', 'Output filename')
263
+ .option('--include-output', 'Include built PDF/DOCX files')
264
+ .action(async (options: ExportOptions) => {
265
+ const { default: AdmZip } = await import('adm-zip');
266
+ const { build } = await import('../build.js');
267
+
268
+ let config: Partial<BuildConfig> = {};
269
+ try {
270
+ config = loadBuildConfig('.') || {};
271
+ } catch {
272
+ // Not in a rev project, that's ok
273
+ }
274
+
275
+ // Build first if including output
276
+ if (options.includeOutput) {
277
+ console.log(chalk.dim('Building documents...'));
278
+ await build('.', ['pdf', 'docx']);
279
+ }
280
+
281
+ const zip = new AdmZip();
282
+ const projectName = config.title?.replace(/[^a-zA-Z0-9]/g, '-').toLowerCase() || 'project';
283
+ const outputPath = options.output || `${projectName}-export.zip`;
284
+
285
+ const exclude = ['node_modules', '.git', '.DS_Store', '*.zip'];
286
+
287
+ const shouldInclude = (name: string): boolean => {
288
+ if (!options.includeOutput && (name.endsWith('.pdf') || name.endsWith('.docx'))) {
289
+ return false;
290
+ }
291
+ for (const pattern of exclude) {
292
+ if (name === pattern || name.includes(pattern.replace('*', ''))) return false;
293
+ }
294
+ return true;
295
+ };
296
+
297
+ addDirToZip(zip, '.', shouldInclude);
298
+
299
+ zip.writeZip(outputPath);
300
+ console.log(fmt.status('success', `Exported: ${outputPath}`));
301
+ });
302
+
303
+ // ==========================================================================
304
+ // CLEAN command - Remove generated files
305
+ // ==========================================================================
306
+
307
+ program
308
+ .command('clean')
309
+ .description('Remove generated files (paper.md, PDFs, DOCXs)')
310
+ .option('-n, --dry-run', 'Show what would be deleted without deleting')
311
+ .option('--all', 'Also remove backup and export zips')
312
+ .action((options: CleanOptions) => {
313
+ let config: Partial<BuildConfig> = {};
314
+ try {
315
+ config = loadBuildConfig('.') || {};
316
+ } catch {
317
+ // Not in a rev project, that's ok
318
+ }
319
+
320
+ const projectName = config.title?.toLowerCase().replace(/\s+/g, '-') || 'paper';
321
+
322
+ // Files to clean
323
+ const patterns = [
324
+ 'paper.md',
325
+ '*.pdf',
326
+ `${projectName}.docx`,
327
+ `${projectName}.pdf`,
328
+ `${projectName}.tex`,
329
+ '.paper-*.md', // Temp build files
330
+ ];
331
+
332
+ if (options.all) {
333
+ patterns.push('*.zip', 'backup-*.zip', '*-export.zip');
334
+ }
335
+
336
+ const toDelete: string[] = [];
337
+
338
+ for (const pattern of patterns) {
339
+ if (pattern.includes('*')) {
340
+ const regex = new RegExp('^' + pattern.replace(/\./g, '\\.').replace(/\*/g, '.*') + '$');
341
+ const files = fs.readdirSync('.').filter(f => regex.test(f));
342
+ toDelete.push(...files);
343
+ } else if (fs.existsSync(pattern)) {
344
+ toDelete.push(pattern);
345
+ }
346
+ }
347
+
348
+ if (toDelete.length === 0) {
349
+ console.log(chalk.dim('No generated files to clean.'));
350
+ return;
351
+ }
352
+
353
+ console.log(fmt.header('Clean'));
354
+ console.log();
355
+
356
+ for (const file of toDelete) {
357
+ if (options.dryRun) {
358
+ console.log(chalk.dim(` Would delete: ${file}`));
359
+ } else {
360
+ fs.unlinkSync(file);
361
+ console.log(chalk.red(` Deleted: ${file}`));
362
+ }
363
+ }
364
+
365
+ console.log();
366
+ if (options.dryRun) {
367
+ console.log(chalk.dim(`Would delete ${toDelete.length} file(s). Run without --dry-run to delete.`));
368
+ } else {
369
+ console.log(fmt.status('success', `Cleaned ${toDelete.length} file(s)`));
370
+ }
371
+ });
372
+ }