@swarmdo/cli 1.4.8

package/dist/src/log-filters.js

@@ -0,0 +1,107 @@
+"use strict";
+/**
+ * Console filter installed at the top of every entry point. Three jobs:
+ *
+ * 1. Suppress the cosmetic "[AgentDB Patch] Controller index not found"
+ *    warning emitted by agentic-flow's runtime patch (it expects agentdb
+ *    v1.x layout but we use v3). Tight match: requires BOTH the prefix
+ *    AND the specific message. Other [AgentDB Patch] messages flow through.
+ *    Audit log audit_1776483149979 flagged the previous broad filter as
+ *    too aggressive — this one is tight enough to be safe.
+ *
+ * 2. (#2253, #2256) Redirect noisy stdout writes from upstream embedder
+ *    libraries (swarmvector ONNX loader, swarmvector-onnx-embeddings-wasm
+ *    parallel embedder) to stderr. The libraries use `console.log` for
+ *    progress messages like "Loading model:" and "  Downloading: ...",
+ *    which corrupts MCP JSON-RPC stdio (#2253) and is generally noise on
+ *    stdout.
+ *
+ * 3. Suppress agentdb's mock-embedder-fallback warning cluster emitted by
+ *    `agentdb/dist/controllers/EmbeddingService.js` lines 48–56 when
+ *    transformers.js initialisation fails (commonly: macOS arm64 without
+ *    `brew install vips` — sharp can't load `libvips-cpp.42.dylib`). The
+ *    warnings advertise that agentdb is "falling back to mock embeddings"
+ *    — but `memory-bridge.ts::rescueAgentdbEmbedder` monkey-patches
+ *    agentdb's embedder to delegate to our working swarmvector ONNX pipeline
+ *    in that exact case, so the user is NOT actually on mock embeddings.
+ *    Letting the warning through is misleading and gets reported as a
+ *    bug (user-reported 2026-06-02, no GH issue). Suppression is safe
+ *    because the rescue handles the underlying condition; if the rescue
+ *    itself fails, the user still sees `[WARN] No results found` from
+ *    the calling command which surfaces the real symptom.
+ *
+ * This file MUST be imported as the first side-effect import in any entry
+ * point so the patch is in place before agentic-flow / swarmvector / agentdb
+ * (and anything that transitively imports them) loads. ES module imports
+ * are evaluated before the file's own top-level code, so putting this in
+ * src/index.ts directly would race with transitive eager imports.
+ */
+const isCosmeticAgentdbPatchNoise = (msg) => {
+    const s = String(msg ?? '');
+    return s.includes('[AgentDB Patch]') && s.includes('Controller index not found');
+};
+// #2253 / #2256: prefixes from third-party embedder libs that come out on
+// stdout via console.log and corrupt MCP JSON-RPC. We redirect to stderr.
+// Match is anchored to known prefixes only — anything else (e.g. legitimate
+// user-facing CLI output) is unaffected.
+const STDERR_REDIRECT_PREFIXES = [
+    'Loading model: ', // swarmvector + swarmvector-onnx-embeddings-wasm loader.js
+    '  Downloading: ', // swarmvector + swarmvector-onnx-embeddings-wasm loader.js
+    '  Cache hit: ', // swarmvector + swarmvector-onnx-embeddings-wasm loader.js
+    'Model cache cleared', // swarmvector + swarmvector-onnx-embeddings-wasm loader.js
+    '🚀 Initializing ', // swarmvector-onnx-embeddings-wasm parallel-embedder.mjs
+    '✅ ', // swarmvector-onnx-embeddings-wasm parallel-embedder.mjs (workers ready)
+    '  Disk cache hit: ', // swarmvector-onnx-embeddings-wasm parallel-embedder.mjs
+];
+// (3) Suppress the agentdb mock-embedder-fallback cluster. Each entry below
+// matches the EXACT prefix `console.warn` argument from
+// agentdb/dist/controllers/EmbeddingService.js:48–56. Keep this list
+// pinned to upstream lines, not broadened heuristically — broader filters
+// risk hiding real signals (audit_1776483149979 lesson).
+const AGENTDB_MOCK_FALLBACK_DROP_PREFIXES = [
+    'Transformers.js initialization failed:', // line 48 — multi-line because the error has multi-line .message
+    '   Falling back to mock embeddings for testing', // line 49
+    '   This is normal if:', // line 50
+    '     - Running offline/without internet access', // line 51
+    '     - Model not yet downloaded', // line 52
+    '     - Network connectivity issues', // line 53
+    '   To use real embeddings:', // line 54
+    '     - Ensure internet connectivity for first', // line 55
+    '     - Or pre-download: npx agentdb', // line 56
+];
+const shouldRedirectToStderr = (msg) => {
+    const s = String(msg ?? '');
+    for (const prefix of STDERR_REDIRECT_PREFIXES) {
+        if (s.startsWith(prefix))
+            return true;
+    }
+    return false;
+};
+const isAgentdbMockFallbackNoise = (msg) => {
+    const s = String(msg ?? '');
+    for (const prefix of AGENTDB_MOCK_FALLBACK_DROP_PREFIXES) {
+        if (s.startsWith(prefix))
+            return true;
+    }
+    return false;
+};
+const origWarn = console.warn.bind(console);
+const origLog = console.log.bind(console);
+const origError = console.error.bind(console);
+console.warn = (...args) => {
+    if (isCosmeticAgentdbPatchNoise(args[0]))
+        return;
+    if (isAgentdbMockFallbackNoise(args[0]))
+        return;
+    origWarn(...args);
+};
+console.log = (...args) => {
+    if (isCosmeticAgentdbPatchNoise(args[0]))
+        return;
+    if (shouldRedirectToStderr(args[0])) {
+        origError(...args);
+        return;
+    }
+    origLog(...args);
+};
+//# sourceMappingURL=log-filters.js.map

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package/dist/src/mcp-client.d.ts

@@ -0,0 +1,110 @@
+/**
+ * V3 CLI MCP Client
+ *
+ * Thin wrapper for calling MCP tools from CLI commands.
+ * Implements ADR-005: MCP-First API Design - CLI as thin wrapper around MCP tools
+ *
+ * This provides a simple interface for CLI commands to call MCP tools without
+ * containing hardcoded business logic. All business logic lives in MCP tool handlers.
+ */
+import type { MCPTool } from './mcp-tools/types.js';
+/** All group keys, in a stable order. */
+export declare const TOOL_GROUP_KEYS: string[];
+/**
+ * (Re)build the registry from a set of group keys, or `'all'`. Clears first so
+ * this is idempotent and safe to call to switch profiles. Returns a summary.
+ */
+export declare function applyToolGroups(groups: readonly string[] | 'all'): {
+    profileGroups: string[];
+    toolCount: number;
+};
+/**
+ * Apply a named profile (lean / balanced / full). Unknown names fail open to
+ * `'all'`. Also honored implicitly at module load via SWARMDO_TOOLS_PROFILE.
+ */
+export declare function applyToolProfile(profileName: string | undefined): {
+    profileGroups: string[];
+    toolCount: number;
+};
+/**
+ * MCP Client Error
+ */
+export declare class MCPClientError extends Error {
+    toolName: string;
+    cause?: Error | undefined;
+    constructor(message: string, toolName: string, cause?: Error | undefined);
+}
+/**
+ * Call an MCP tool by name with input parameters
+ *
+ * @param toolName - Name of the MCP tool (e.g., 'agent_spawn', 'swarm_init')
+ * @param input - Input parameters for the tool
+ * @param context - Optional tool context
+ * @returns Promise resolving to tool result
+ * @throws {MCPClientError} If tool not found or execution fails
+ *
+ * @example
+ * ```typescript
+ * // Spawn an agent
+ * const result = await callMCPTool('agent_spawn', {
+ *   agentType: 'coder',
+ *   priority: 'normal'
+ * });
+ *
+ * // Initialize swarm
+ * const swarm = await callMCPTool('swarm_init', {
+ *   topology: 'hierarchical-mesh',
+ *   maxAgents: 15
+ * });
+ * ```
+ */
+export declare function callMCPTool<T = unknown>(toolName: string, input?: Record<string, unknown>, context?: Record<string, unknown>): Promise<T>;
+/**
+ * Get tool metadata by name
+ *
+ * @param toolName - Name of the MCP tool
+ * @returns Tool metadata or undefined if not found
+ */
+export declare function getToolMetadata(toolName: string): Omit<MCPTool, 'handler'> | undefined;
+/**
+ * List all available MCP tools
+ *
+ * @param category - Optional category filter
+ * @returns Array of tool metadata
+ */
+export declare function listMCPTools(category?: string): Array<Omit<MCPTool, 'handler'>>;
+/**
+ * Check if an MCP tool exists
+ *
+ * @param toolName - Name of the MCP tool
+ * @returns True if tool exists
+ */
+export declare function hasTool(toolName: string): boolean;
+/**
+ * Get all tool categories
+ *
+ * @returns Array of unique categories
+ */
+export declare function getToolCategories(): string[];
+/**
+ * Validate tool input against schema
+ *
+ * @param toolName - Name of the MCP tool
+ * @param input - Input to validate
+ * @returns Validation result with errors if any
+ */
+export declare function validateToolInput(toolName: string, input: Record<string, unknown>): {
+    valid: boolean;
+    errors?: string[];
+};
+declare const _default: {
+    callMCPTool: typeof callMCPTool;
+    getToolMetadata: typeof getToolMetadata;
+    listMCPTools: typeof listMCPTools;
+    hasTool: typeof hasTool;
+    getToolCategories: typeof getToolCategories;
+    validateToolInput: typeof validateToolInput;
+    MCPClientError: typeof MCPClientError;
+};
+export default _default;
+//# sourceMappingURL=mcp-client.d.ts.map

package/dist/src/mcp-client.d.ts.map

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package/dist/src/mcp-client.js

@@ -0,0 +1,389 @@
+/**
+ * V3 CLI MCP Client
+ *
+ * Thin wrapper for calling MCP tools from CLI commands.
+ * Implements ADR-005: MCP-First API Design - CLI as thin wrapper around MCP tools
+ *
+ * This provides a simple interface for CLI commands to call MCP tools without
+ * containing hardcoded business logic. All business logic lives in MCP tool handlers.
+ */
+import { resolveProfileGroups } from './mcp-tools/profiles.js';
+// Import MCP tool handlers from local package
+import { agentTools } from './mcp-tools/agent-tools.js';
+import { swarmTools } from './mcp-tools/swarm-tools.js';
+import { memoryTools } from './mcp-tools/memory-tools.js';
+import { configTools } from './mcp-tools/config-tools.js';
+import { hooksTools } from './mcp-tools/hooks-tools.js';
+import { taskTools } from './mcp-tools/task-tools.js';
+import { sessionTools } from './mcp-tools/session-tools.js';
+import { hiveMindTools } from './mcp-tools/hive-mind-tools.js';
+import { workflowTools } from './mcp-tools/workflow-tools.js';
+import { analyzeTools } from './mcp-tools/analyze-tools.js';
+import { progressTools } from './mcp-tools/progress-tools.js';
+import { embeddingsTools } from './mcp-tools/embeddings-tools.js';
+import { claimsTools } from './mcp-tools/claims-tools.js';
+import { securityTools } from './mcp-tools/security-tools.js';
+import { transferTools } from './mcp-tools/transfer-tools.js';
+// V2 Compatibility tools
+import { systemTools } from './mcp-tools/system-tools.js';
+import { terminalTools } from './mcp-tools/terminal-tools.js';
+import { neuralTools } from './mcp-tools/neural-tools.js';
+import { performanceTools } from './mcp-tools/performance-tools.js';
+import { githubTools } from './mcp-tools/github-tools.js';
+import { daaTools } from './mcp-tools/daa-tools.js';
+import { coordinationTools } from './mcp-tools/coordination-tools.js';
+import { browserTools } from './mcp-tools/browser-tools.js';
+import { browserSessionTools } from './mcp-tools/browser-session-tools.js';
+import { execFileSync } from 'node:child_process';
+// Phase 6: AgentDB v3 controller tools
+import { agentdbTools } from './mcp-tools/agentdb-tools.js';
+// SwarmVector WASM tools
+import { swarmllmWasmTools } from './mcp-tools/swarmllm-tools.js';
+import { wasmAgentTools } from './mcp-tools/wasm-agent-tools.js';
+// ADR-115: Anthropic Claude Managed Agents — a cloud agent runtime alongside
+// the local WASM-sandboxed `wasm_agent_*` (rvagent) tools. Lives in the
+// `swarmdo-agent` plugin.
+import { managedAgentTools } from './mcp-tools/managed-agent-tools.js';
+import { guidanceTools } from './mcp-tools/guidance-tools.js';
+import { autopilotTools } from './mcp-tools/autopilot-tools.js';
+// ADR-150 — MetaHarness MCP tools (score / genome / mcp-scan / threat-model / oia-audit)
+import { metaharnessTools } from './mcp-tools/metaharness-tools.js';
+// #1916: coverage-aware routing tools — defined in swarmvector/coverage-tools.ts
+// but were never registered, so the `swarmdo hooks coverage-*` CLI subcommands
+// failed with `Tool not found: hooks_coverage-route`.
+import { coverageRouterTools } from './swarmvector/coverage-tools.js';
+// #1605: Only register browser tools if agent-browser is available
+let _browserAvailable = null;
+function getBrowserTools() {
+    if (_browserAvailable === null) {
+        try {
+            execFileSync('agent-browser', ['--version'], { stdio: 'ignore', timeout: 3000 });
+            _browserAvailable = true;
+        }
+        catch {
+            _browserAvailable = false;
+        }
+    }
+    return _browserAvailable ? browserTools : [];
+}
+/**
+ * Lifecycle MCP tools for swarmdo-browser session-as-skill architecture
+ * (ADR-0001 swarmdo-browser §7). Always registered: their handlers shell out
+ * to swarmvector + agent-browser + swarmdo memory and degrade gracefully
+ * when those CLIs are missing.
+ */
+function getBrowserSessionTools() {
+    return browserSessionTools;
+}
+/**
+ * MCP Tool Registry
+ * Maps tool names to their handler functions
+ */
+const TOOL_REGISTRY = new Map();
+// Register all tools
+function registerTools(tools) {
+    tools.forEach(tool => {
+        TOOL_REGISTRY.set(tool.name, tool);
+    });
+}
+/**
+ * Named tool groups (Sprint 2 Move 2'). Each key maps to a tool array so a
+ * profile (lean / balanced / full) can select a subset at server start. Lazy
+ * thunks for browser groups preserve the agent-browser availability probe.
+ */
+const TOOL_GROUPS = {
+    agent: () => agentTools,
+    swarm: () => swarmTools,
+    memory: () => memoryTools,
+    config: () => configTools,
+    hooks: () => hooksTools,
+    task: () => taskTools,
+    session: () => sessionTools,
+    'hive-mind': () => hiveMindTools,
+    workflow: () => workflowTools,
+    analyze: () => analyzeTools,
+    progress: () => progressTools,
+    embeddings: () => embeddingsTools,
+    claims: () => claimsTools,
+    security: () => securityTools,
+    transfer: () => transferTools,
+    system: () => systemTools,
+    terminal: () => terminalTools,
+    neural: () => neuralTools,
+    performance: () => performanceTools,
+    github: () => githubTools,
+    daa: () => daaTools,
+    coordination: () => coordinationTools,
+    browser: () => [...getBrowserTools(), ...getBrowserSessionTools()],
+    agentdb: () => agentdbTools,
+    swarmllm: () => swarmllmWasmTools,
+    wasm: () => wasmAgentTools,
+    'managed-agent': () => managedAgentTools,
+    guidance: () => guidanceTools,
+    autopilot: () => autopilotTools,
+    coverage: () => coverageRouterTools,
+    metaharness: () => metaharnessTools,
+};
+/** All group keys, in a stable order. */
+export const TOOL_GROUP_KEYS = Object.keys(TOOL_GROUPS);
+/**
+ * (Re)build the registry from a set of group keys, or `'all'`. Clears first so
+ * this is idempotent and safe to call to switch profiles. Returns a summary.
+ */
+export function applyToolGroups(groups) {
+    TOOL_REGISTRY.clear();
+    const keys = groups === 'all' ? TOOL_GROUP_KEYS : TOOL_GROUP_KEYS.filter(k => groups.includes(k));
+    for (const key of keys) {
+        const fn = TOOL_GROUPS[key];
+        if (fn)
+            registerTools(fn());
+    }
+    return { profileGroups: keys, toolCount: TOOL_REGISTRY.size };
+}
+/**
+ * Apply a named profile (lean / balanced / full). Unknown names fail open to
+ * `'all'`. Also honored implicitly at module load via SWARMDO_TOOLS_PROFILE.
+ */
+export function applyToolProfile(profileName) {
+    return applyToolGroups(resolveProfileGroups(profileName));
+}
+// Initialize registry at module load. `mcp start` sets SWARMDO_TOOLS_PROFILE
+// (and/or SWARMDO_TOOLS_GROUPS as an explicit csv) before the server's dynamic
+// import of this module, so the first registration already reflects the
+// chosen profile. Default (no env) = full, preserving existing behavior.
+(() => {
+    const csv = process.env.SWARMDO_TOOLS_GROUPS;
+    if (csv && csv.trim()) {
+        applyToolGroups(csv.split(',').map(s => s.trim()).filter(Boolean));
+        return;
+    }
+    applyToolProfile(process.env.SWARMDO_TOOLS_PROFILE);
+})();
+/**
+ * MCP Client Error
+ */
+export class MCPClientError extends Error {
+    toolName;
+    cause;
+    constructor(message, toolName, cause) {
+        super(message);
+        this.toolName = toolName;
+        this.cause = cause;
+        this.name = 'MCPClientError';
+    }
+}
+/**
+ * Call an MCP tool by name with input parameters
+ *
+ * @param toolName - Name of the MCP tool (e.g., 'agent_spawn', 'swarm_init')
+ * @param input - Input parameters for the tool
+ * @param context - Optional tool context
+ * @returns Promise resolving to tool result
+ * @throws {MCPClientError} If tool not found or execution fails
+ *
+ * @example
+ * ```typescript
+ * // Spawn an agent
+ * const result = await callMCPTool('agent_spawn', {
+ *   agentType: 'coder',
+ *   priority: 'normal'
+ * });
+ *
+ * // Initialize swarm
+ * const swarm = await callMCPTool('swarm_init', {
+ *   topology: 'hierarchical-mesh',
+ *   maxAgents: 15
+ * });
+ * ```
+ */
+export async function callMCPTool(toolName, input = {}, context) {
+    // Look up tool in registry
+    const tool = TOOL_REGISTRY.get(toolName);
+    if (!tool) {
+        throw new MCPClientError(`MCP tool not found: ${toolName}`, toolName);
+    }
+    try {
+        // Call the tool handler
+        const result = await tool.handler(input, context);
+        // ADR-146 P2: scan every tool result for indirect-injection before it
+        // returns to the caller. The screen is opt-in via env (default off in
+        // 3.10.34 — flip to default in v4) so existing pipelines keep their
+        // exact behaviour while the call site is exercised by tests and
+        // adopters. Telemetry from the screen lands in the shared
+        // GuardrailEvent sink (P5).
+        return applyContentBoundaryGuardrail(toolName, result);
+    }
+    catch (error) {
+        // Wrap and re-throw with context
+        throw new MCPClientError(`Failed to execute MCP tool '${toolName}': ${error instanceof Error ? error.message : String(error)}`, toolName, error instanceof Error ? error : undefined);
+    }
+}
+/**
+ * ADR-146 P2 — content-boundary screen on the MCP tool dispatch path.
+ *
+ * Default behaviour (3.10.34, legacy mode): returns the result unchanged.
+ * With `SWARMDO_STRICT_GUARDRAIL=true`, scans every string field of the
+ * result; `reject` substitutes the field with a typed marker so the caller
+ * can surface the rejection. The class itself (`ToolOutputGuardrail`)
+ * shipped in ADR-131 P1; this call site is what closes #2149.
+ *
+ * Implementation note: we resolve the guardrail lazily so the cold-import
+ * cost of `@swarmdo/security` does not hit every CLI invocation. Once
+ * P5 wires structured telemetry, this also publishes a `GuardrailEvent`.
+ */
+let _guardrailInstance = null;
+function applyContentBoundaryGuardrail(toolName, result) {
+    if (process.env.SWARMDO_STRICT_GUARDRAIL !== 'true')
+        return result;
+    if (typeof result !== 'object' || result === null)
+        return result;
+    // Lazy-resolve the guardrail singleton to avoid hot-path import cost.
+    if (_guardrailInstance === null) {
+        try {
+            // eslint-disable-next-line @typescript-eslint/no-require-imports
+            const sec = require('@swarmdo/security');
+            if (sec?.createToolOutputGuardrail) {
+                _guardrailInstance = sec.createToolOutputGuardrail();
+            }
+            else {
+                return result; // module shape unexpected — fail open
+            }
+        }
+        catch {
+            return result; // security package not installed in this consumer — fail open
+        }
+    }
+    const guardrail = _guardrailInstance;
+    if (!guardrail)
+        return result;
+    // Walk the result object one level deep. We do not deeply traverse because
+    // most tool results are flat record shapes; deep recursion would change the
+    // p99 latency contract. Hot strings tend to live at the top level.
+    const out = {};
+    let mutated = false;
+    for (const [k, v] of Object.entries(result)) {
+        if (typeof v === 'string' && v.length > 0) {
+            const decision = guardrail.scanAndEnforce(v);
+            if (decision.action === 'reject') {
+                out[k] = `<rejected-by-guardrail tool=${JSON.stringify(toolName)} category=${decision.result.category}>`;
+                mutated = true;
+                continue;
+            }
+            if (decision.action === 'redact') {
+                out[k] = decision.content;
+                mutated = true;
+                continue;
+            }
+        }
+        out[k] = v;
+    }
+    return mutated ? out : result;
+}
+/**
+ * Get tool metadata by name
+ *
+ * @param toolName - Name of the MCP tool
+ * @returns Tool metadata or undefined if not found
+ */
+export function getToolMetadata(toolName) {
+    const tool = TOOL_REGISTRY.get(toolName);
+    if (!tool) {
+        return undefined;
+    }
+    // Return everything except the handler function
+    return {
+        name: tool.name,
+        description: tool.description,
+        inputSchema: tool.inputSchema,
+        category: tool.category,
+        tags: tool.tags,
+        version: tool.version,
+        cacheable: tool.cacheable,
+        cacheTTL: tool.cacheTTL,
+    };
+}
+/**
+ * List all available MCP tools
+ *
+ * @param category - Optional category filter
+ * @returns Array of tool metadata
+ */
+export function listMCPTools(category) {
+    const tools = Array.from(TOOL_REGISTRY.values());
+    const filtered = category
+        ? tools.filter(t => t.category === category)
+        : tools;
+    return filtered.map(tool => ({
+        name: tool.name,
+        description: tool.description,
+        inputSchema: tool.inputSchema,
+        category: tool.category,
+        tags: tool.tags,
+        version: tool.version,
+        cacheable: tool.cacheable,
+        cacheTTL: tool.cacheTTL,
+    }));
+}
+/**
+ * Check if an MCP tool exists
+ *
+ * @param toolName - Name of the MCP tool
+ * @returns True if tool exists
+ */
+export function hasTool(toolName) {
+    return TOOL_REGISTRY.has(toolName);
+}
+/**
+ * Get all tool categories
+ *
+ * @returns Array of unique categories
+ */
+export function getToolCategories() {
+    const categories = new Set();
+    TOOL_REGISTRY.forEach(tool => {
+        if (tool.category) {
+            categories.add(tool.category);
+        }
+    });
+    return Array.from(categories).sort();
+}
+/**
+ * Validate tool input against schema
+ *
+ * @param toolName - Name of the MCP tool
+ * @param input - Input to validate
+ * @returns Validation result with errors if any
+ */
+export function validateToolInput(toolName, input) {
+    const tool = TOOL_REGISTRY.get(toolName);
+    if (!tool) {
+        return {
+            valid: false,
+            errors: [`Tool '${toolName}' not found`],
+        };
+    }
+    // Basic validation - check required fields
+    const schema = tool.inputSchema;
+    const errors = [];
+    if (schema.required && Array.isArray(schema.required)) {
+        for (const requiredField of schema.required) {
+            if (!(requiredField in input)) {
+                errors.push(`Missing required field: ${requiredField}`);
+            }
+        }
+    }
+    return {
+        valid: errors.length === 0,
+        errors: errors.length > 0 ? errors : undefined,
+    };
+}
+export default {
+    callMCPTool,
+    getToolMetadata,
+    listMCPTools,
+    hasTool,
+    getToolCategories,
+    validateToolInput,
+    MCPClientError,
+};
+//# sourceMappingURL=mcp-client.js.map

package/dist/src/mcp-client.js.map

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