@swarmdo/cli 1.4.8

package/.claude/skills/sdo-verification-quality/SKILL.md

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+---
+name: "Verification & Quality Assurance"
+description: |
+  Comprehensive truth scoring, code quality verification, and automatic rollback system with 0.95 accuracy threshold for ensuring high-quality agent outputs and codebase reliability.
+---
+
+# Verification & Quality Assurance Skill
+
+## What This Skill Does
+
+This skill provides a comprehensive verification and quality assurance system that ensures code quality and correctness through:
+
+- **Truth Scoring**: Real-time reliability metrics (0.0-1.0 scale) for code, agents, and tasks
+- **Verification Checks**: Automated code correctness, security, and best practices validation
+- **Automatic Rollback**: Instant reversion of changes that fail verification (default threshold: 0.95)
+- **Quality Metrics**: Statistical analysis with trends, confidence intervals, and improvement tracking
+- **CI/CD Integration**: Export capabilities for continuous integration pipelines
+- **Real-time Monitoring**: Live dashboards and watch modes for ongoing verification
+
+> **Shipped vs. aspirational.** The *concrete, in-CI* verification stack — the 6 regression-guard jobs + the witness manifest + the tool-discoverability audit — is real and runs on every push. The truth-scoring / auto-rollback / WebSocket-dashboard surface described later in this doc is partly shipped (`swarmdo verify` runs the witness checks) and partly design — treat the "CI Guards" section below as the authoritative current state.
+
+## CI Guards — what's actually shipped (current state)
+
+Swarmdo's regression protection is three layers, all gated before publish. Authoritative reference: [`verification/README.md`](../../../verification/README.md).
+
+| Layer | What | CI job(s) in `.github/workflows/v3-ci.yml` | ADR |
+|---|---|---|---|
+| **1 — install/behavioral smoke** | Exercise user-visible failure modes against a real build | `smoke-install-no-bsqlite` (npm install on platforms w/o prebuilds), `plugin-hooks-smoke` (#1859/#1862 — hook flag parsing), `mcp-protocol-smoke` (#1874 — HTTP MCP wire format), `memory-import-smoke` (#1883/#1884 — WSL path + key sanitization), `mcp-roundtrip-smoke` (#1889 paired-tool round-trip + #1863 cli-no-crash + ADR-095 G2 consensus-transport) | ADR-102 |
+| **1 — discoverability gate** | Every MCP tool description must answer "use this over native when?" | `tool-descriptions-audit` — `scripts/audit-tool-descriptions.mjs`, baseline at `verification/mcp-tool-baseline.json` (monotone-decreasing: noGuidance / tooShort / duplicates) | ADR-112 |
+| **2 — cryptographic witness** | Every documented fix's load-bearing marker must still be present in dist; Ed25519-signed, per-OS bundles | `witness-verify` (ubuntu/macos/windows) — `plugins/swarmdo-core/scripts/witness/verify.mjs` against `verification/<os>/manifest.md.json` | ADR-103 |
+| **3 — temporal history** | When was a regression introduced | `verification/<os>/history.jsonl` + `history.mjs` (`summary` / `regressions` / `timeline`) | ADR-103 |
+
+### Run the guards locally
+
+```bash
+# Tool-description discoverability audit (ADR-112)
+node scripts/audit-tool-descriptions.mjs                       # fails if any baseline count rises
+node scripts/audit-tool-descriptions.mjs --update-baseline     # lock the new floor after a fix lands
+
+# Behavioral smokes (each builds what it needs; safe to run individually)
+node plugins/swarmdo-core/scripts/test-hooks.mjs "node $PWD/v3/@swarmdo/cli/bin/cli.js"
+node plugins/swarmdo-core/scripts/test-mcp-protocol.mjs
+node plugins/swarmdo-core/scripts/test-memory-import.mjs
+node plugins/swarmdo-core/scripts/test-mcp-roundtrips.mjs        # #1889 paired-tool round-trip
+node plugins/swarmdo-core/scripts/test-cli-no-crash.mjs          # #1863 unhandled-exception class
+node plugins/swarmdo-core/scripts/test-consensus-transport.mjs   # ADR-095 G2 consensus transport
+
+# Witness manifest — regenerate + verify
+node scripts/regen-witness.mjs
+node plugins/swarmdo-core/scripts/witness/verify.mjs --manifest verification/macos/manifest.md.json
+
+# Temporal history
+node plugins/swarmdo-core/scripts/witness/history.mjs --history verification/macos/history.jsonl summary
+node plugins/swarmdo-core/scripts/witness/history.mjs --history verification/macos/history.jsonl regressions
+```
+
+### Adding a new guard
+
+1. **Behavioral smoke** → write `plugins/swarmdo-core/scripts/test-<name>.mjs`. Pattern: static dist-scan first (fast, always completes), behavioral probe second with an internal timeout + a process-level watchdog so CI never hangs. Add a step to the relevant job in `v3-ci.yml`.
+2. **Static gate with a baseline** → write `scripts/audit-<name>.mjs` that scans, counts violations, and fails if the count exceeds a monotone-decreasing baseline in `verification/<name>-baseline.json`. Support `--update-baseline`. Add a CI job; wire it into `witness-verify` `needs[]` if it should gate `publish`.
+3. **Documented-fix marker** → append `{ id, desc, file, marker }` to `verification/witness-fixes.json`, run `node scripts/regen-witness.mjs`. The marker must be a substring the fix specifically creates (not a generic pattern like `'function'`).
+
+## Prerequisites
+
+- Swarmdo installed (`npx swarmdo@alpha`)
+- Git repository (for rollback features)
+- Node.js 18+ (for dashboard features)
+- `@noble/ed25519` (for the witness verifier — a single runtime dep, `npm i @noble/ed25519`)
+
+## Quick Start
+
+```bash
+# View current truth scores
+npx swarmdo@alpha truth
+
+# Run verification check
+npx swarmdo@alpha verify check
+
+# Verify specific file with custom threshold
+npx swarmdo@alpha verify check --file src/app.js --threshold 0.98
+
+# Rollback last failed verification
+npx swarmdo@alpha verify rollback --last-good
+```
+
+---
+
+## Complete Guide
+
+### Truth Scoring System
+
+#### View Truth Metrics
+
+Display comprehensive quality and reliability metrics for your codebase and agent tasks.
+
+**Basic Usage:**
+```bash
+# View current truth scores (default: table format)
+npx swarmdo@alpha truth
+
+# View scores for specific time period
+npx swarmdo@alpha truth --period 7d
+
+# View scores for specific agent
+npx swarmdo@alpha truth --agent coder --period 24h
+
+# Find files/tasks below threshold
+npx swarmdo@alpha truth --threshold 0.8
+```
+
+**Output Formats:**
+```bash
+# Table format (default)
+npx swarmdo@alpha truth --format table
+
+# JSON for programmatic access
+npx swarmdo@alpha truth --format json
+
+# CSV for spreadsheet analysis
+npx swarmdo@alpha truth --format csv
+
+# HTML report with visualizations
+npx swarmdo@alpha truth --format html --export report.html
+```
+
+**Real-time Monitoring:**
+```bash
+# Watch mode with live updates
+npx swarmdo@alpha truth --watch
+
+# Export metrics automatically
+npx swarmdo@alpha truth --export .swarmdo/metrics/truth-$(date +%Y%m%d).json
+```
+
+#### Truth Score Dashboard
+
+Example dashboard output:
+```
+📊 Truth Metrics Dashboard
+━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━
+
+Overall Truth Score: 0.947 ✅
+Trend: ↗️ +2.3% (7d)
+
+Top Performers:
+  verification-agent   0.982 ⭐
+  code-analyzer       0.971 ⭐
+  test-generator      0.958 ✅
+
+Needs Attention:
+  refactor-agent      0.821 ⚠️
+  docs-generator      0.794 ⚠️
+
+Recent Tasks:
+  task-456  0.991 ✅  "Implement auth"
+  task-455  0.967 ✅  "Add tests"
+  task-454  0.743 ❌  "Refactor API"
+```
+
+#### Metrics Explained
+
+**Truth Scores (0.0-1.0):**
+- `1.0-0.95`: Excellent ⭐ (production-ready)
+- `0.94-0.85`: Good ✅ (acceptable quality)
+- `0.84-0.75`: Warning ⚠️ (needs attention)
+- `<0.75`: Critical ❌ (requires immediate action)
+
+**Trend Indicators:**
+- ↗️ Improving (positive trend)
+- → Stable (consistent performance)
+- ↘️ Declining (quality regression detected)
+
+**Statistics:**
+- **Mean Score**: Average truth score across all measurements
+- **Median Score**: Middle value (less affected by outliers)
+- **Standard Deviation**: Consistency of scores (lower = more consistent)
+- **Confidence Interval**: Statistical reliability of measurements
+
+### Verification Checks
+
+#### Run Verification
+
+Execute comprehensive verification checks on code, tasks, or agent outputs.
+
+**File Verification:**
+```bash
+# Verify single file
+npx swarmdo@alpha verify check --file src/app.js
+
+# Verify directory recursively
+npx swarmdo@alpha verify check --directory src/
+
+# Verify with auto-fix enabled
+npx swarmdo@alpha verify check --file src/utils.js --auto-fix
+
+# Verify current working directory
+npx swarmdo@alpha verify check
+```
+
+**Task Verification:**
+```bash
+# Verify specific task output
+npx swarmdo@alpha verify check --task task-123
+
+# Verify with custom threshold
+npx swarmdo@alpha verify check --task task-456 --threshold 0.99
+
+# Verbose output for debugging
+npx swarmdo@alpha verify check --task task-789 --verbose
+```
+
+**Batch Verification:**
+```bash
+# Verify multiple files in parallel
+npx swarmdo@alpha verify batch --files "*.js" --parallel
+
+# Verify with pattern matching
+npx swarmdo@alpha verify batch --pattern "src/**/*.ts"
+
+# Integration test suite
+npx swarmdo@alpha verify integration --test-suite full
+```
+
+#### Verification Criteria
+
+The verification system evaluates:
+
+1. **Code Correctness**
+   - Syntax validation
+   - Type checking (TypeScript)
+   - Logic flow analysis
+   - Error handling completeness
+
+2. **Best Practices**
+   - Code style adherence
+   - SOLID principles
+   - Design patterns usage
+   - Modularity and reusability
+
+3. **Security**
+   - Vulnerability scanning
+   - Secret detection
+   - Input validation
+   - Authentication/authorization checks
+
+4. **Performance**
+   - Algorithmic complexity
+   - Memory usage patterns
+   - Database query optimization
+   - Bundle size impact
+
+5. **Documentation**
+   - JSDoc/TypeDoc completeness
+   - README accuracy
+   - API documentation
+   - Code comments quality
+
+#### JSON Output for CI/CD
+
+```bash
+# Get structured JSON output
+npx swarmdo@alpha verify check --json > verification.json
+
+# Example JSON structure:
+{
+  "overallScore": 0.947,
+  "passed": true,
+  "threshold": 0.95,
+  "checks": [
+    {
+      "name": "code-correctness",
+      "score": 0.98,
+      "passed": true
+    },
+    {
+      "name": "security",
+      "score": 0.91,
+      "passed": false,
+      "issues": [...]
+    }
+  ]
+}
+```
+
+### Automatic Rollback
+
+#### Rollback Failed Changes
+
+Automatically revert changes that fail verification checks.
+
+**Basic Rollback:**
+```bash
+# Rollback to last known good state
+npx swarmdo@alpha verify rollback --last-good
+
+# Rollback to specific commit
+npx swarmdo@alpha verify rollback --to-commit abc123
+
+# Interactive rollback with preview
+npx swarmdo@alpha verify rollback --interactive
+```
+
+**Smart Rollback:**
+```bash
+# Rollback only failed files (preserve good changes)
+npx swarmdo@alpha verify rollback --selective
+
+# Rollback with automatic backup
+npx swarmdo@alpha verify rollback --backup-first
+
+# Dry-run mode (preview without executing)
+npx swarmdo@alpha verify rollback --dry-run
+```
+
+**Rollback Performance:**
+- Git-based rollback: <1 second
+- Selective file rollback: <500ms
+- Backup creation: Automatic before rollback
+
+### Verification Reports
+
+#### Generate Reports
+
+Create detailed verification reports with metrics and visualizations.
+
+**Report Formats:**
+```bash
+# JSON report
+npx swarmdo@alpha verify report --format json
+
+# HTML report with charts
+npx swarmdo@alpha verify report --export metrics.html --format html
+
+# CSV for data analysis
+npx swarmdo@alpha verify report --format csv --export metrics.csv
+
+# Markdown summary
+npx swarmdo@alpha verify report --format markdown
+```
+
+**Time-based Reports:**
+```bash
+# Last 24 hours
+npx swarmdo@alpha verify report --period 24h
+
+# Last 7 days
+npx swarmdo@alpha verify report --period 7d
+
+# Last 30 days with trends
+npx swarmdo@alpha verify report --period 30d --include-trends
+
+# Custom date range
+npx swarmdo@alpha verify report --from 2025-01-01 --to 2025-01-31
+```
+
+**Report Content:**
+- Overall truth scores
+- Per-agent performance metrics
+- Task completion quality
+- Verification pass/fail rates
+- Rollback frequency
+- Quality improvement trends
+- Statistical confidence intervals
+
+### Interactive Dashboard
+
+#### Launch Dashboard
+
+Run interactive web-based verification dashboard with real-time updates.
+
+```bash
+# Launch dashboard on default port (3000)
+npx swarmdo@alpha verify dashboard
+
+# Custom port
+npx swarmdo@alpha verify dashboard --port 8080
+
+# Export dashboard data
+npx swarmdo@alpha verify dashboard --export
+
+# Dashboard with auto-refresh
+npx swarmdo@alpha verify dashboard --refresh 5s
+```
+
+**Dashboard Features:**
+- Real-time truth score updates (WebSocket)
+- Interactive charts and graphs
+- Agent performance comparison
+- Task history timeline
+- Rollback history viewer
+- Export to PDF/HTML
+- Filter by time period/agent/score
+
+### Configuration
+
+#### Default Configuration
+
+Set verification preferences in `.swarmdo/config.json`:
+
+```json
+{
+  "verification": {
+    "threshold": 0.95,
+    "autoRollback": true,
+    "gitIntegration": true,
+    "hooks": {
+      "preCommit": true,
+      "preTask": true,
+      "postEdit": true
+    },
+    "checks": {
+      "codeCorrectness": true,
+      "security": true,
+      "performance": true,
+      "documentation": true,
+      "bestPractices": true
+    }
+  },
+  "truth": {
+    "defaultFormat": "table",
+    "defaultPeriod": "24h",
+    "warningThreshold": 0.85,
+    "criticalThreshold": 0.75,
+    "autoExport": {
+      "enabled": true,
+      "path": ".swarmdo/metrics/truth-daily.json"
+    }
+  }
+}
+```
+
+#### Threshold Configuration
+
+**Adjust verification strictness:**
+```bash
+# Strict mode (99% accuracy required)
+npx swarmdo@alpha verify check --threshold 0.99
+
+# Lenient mode (90% acceptable)
+npx swarmdo@alpha verify check --threshold 0.90
+
+# Set default threshold
+npx swarmdo@alpha config set verification.threshold 0.98
+```
+
+**Per-environment thresholds:**
+```json
+{
+  "verification": {
+    "thresholds": {
+      "production": 0.99,
+      "staging": 0.95,
+      "development": 0.90
+    }
+  }
+}
+```
+
+### Integration Examples
+
+#### CI/CD Integration
+
+**GitHub Actions:**
+```yaml
+name: Quality Verification
+
+on: [push, pull_request]
+
+jobs:
+  verify:
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v4
+
+      - name: Install Dependencies
+        run: npm install
+
+      - name: Run Verification
+        run: |
+          npx swarmdo@alpha verify check --json > verification.json
+
+      - name: Check Truth Score
+        run: |
+          score=$(jq '.overallScore' verification.json)
+          if (( $(echo "$score < 0.95" | bc -l) )); then
+            echo "Truth score too low: $score"
+            exit 1
+          fi
+
+      - name: Upload Report
+        uses: actions/upload-artifact@v3
+        with:
+          name: verification-report
+          path: verification.json
+```
+
+**GitLab CI:**
+```yaml
+verify:
+  stage: test
+  script:
+    - npx swarmdo@alpha verify check --threshold 0.95 --json > verification.json
+    - |
+      score=$(jq '.overallScore' verification.json)
+      if [ $(echo "$score < 0.95" | bc) -eq 1 ]; then
+        echo "Verification failed with score: $score"
+        exit 1
+      fi
+  artifacts:
+    paths:
+      - verification.json
+    reports:
+      junit: verification.json
+```
+
+#### Swarm Integration
+
+Run verification automatically during swarm operations:
+
+```bash
+# Swarm with verification enabled
+npx swarmdo@alpha swarm --verify --threshold 0.98
+
+# Hive Mind with auto-rollback
+npx swarmdo@alpha hive-mind --verify --rollback-on-fail
+
+# Training pipeline with verification
+npx swarmdo@alpha train --verify --threshold 0.99
+```
+
+#### Pair Programming Integration
+
+Enable real-time verification during collaborative development:
+
+```bash
+# Pair with verification
+npx swarmdo@alpha pair --verify --real-time
+
+# Pair with custom threshold
+npx swarmdo@alpha pair --verify --threshold 0.97 --auto-fix
+```
+
+### Advanced Workflows
+
+#### Continuous Verification
+
+Monitor codebase continuously during development:
+
+```bash
+# Watch directory for changes
+npx swarmdo@alpha verify watch --directory src/
+
+# Watch with auto-fix
+npx swarmdo@alpha verify watch --directory src/ --auto-fix
+
+# Watch with notifications
+npx swarmdo@alpha verify watch --notify --threshold 0.95
+```
+
+#### Monitoring Integration
+
+Send metrics to external monitoring systems:
+
+```bash
+# Export to Prometheus
+npx swarmdo@alpha truth --format json | \
+  curl -X POST https://pushgateway.example.com/metrics/job/swarmdo \
+  -d @-
+
+# Send to DataDog
+npx swarmdo@alpha verify report --format json | \
+  curl -X POST "https://api.datadoghq.com/api/v1/series?api_key=${DD_API_KEY}" \
+  -H "Content-Type: application/json" \
+  -d @-
+
+# Custom webhook
+npx swarmdo@alpha truth --format json | \
+  curl -X POST https://metrics.example.com/api/truth \
+  -H "Content-Type: application/json" \
+  -d @-
+```
+
+#### Pre-commit Hooks
+
+Automatically verify before commits:
+
+```bash
+# Install pre-commit hook
+npx swarmdo@alpha verify install-hook --pre-commit
+
+# .git/hooks/pre-commit example:
+#!/bin/bash
+npx swarmdo@alpha verify check --threshold 0.95 --json > /tmp/verify.json
+
+score=$(jq '.overallScore' /tmp/verify.json)
+if (( $(echo "$score < 0.95" | bc -l) )); then
+  echo "❌ Verification failed with score: $score"
+  echo "Run 'npx swarmdo@alpha verify check --verbose' for details"
+  exit 1
+fi
+
+echo "✅ Verification passed with score: $score"
+```
+
+### Performance Metrics
+
+**Verification Speed:**
+- Single file check: <100ms
+- Directory scan: <500ms (per 100 files)
+- Full codebase analysis: <5s (typical project)
+- Truth score calculation: <50ms
+
+**Rollback Speed:**
+- Git-based rollback: <1s
+- Selective file rollback: <500ms
+- Backup creation: <2s
+
+**Dashboard Performance:**
+- Initial load: <1s
+- Real-time updates: <100ms latency (WebSocket)
+- Chart rendering: 60 FPS
+
+### Troubleshooting
+
+#### Common Issues
+
+**Low Truth Scores:**
+```bash
+# Get detailed breakdown
+npx swarmdo@alpha truth --verbose --threshold 0.0
+
+# Check specific criteria
+npx swarmdo@alpha verify check --verbose
+
+# View agent-specific issues
+npx swarmdo@alpha truth --agent <agent-name> --format json
+```
+
+**Rollback Failures:**
+```bash
+# Check git status
+git status
+
+# View rollback history
+npx swarmdo@alpha verify rollback --history
+
+# Manual rollback
+git reset --hard HEAD~1
+```
+
+**Verification Timeouts:**
+```bash
+# Increase timeout
+npx swarmdo@alpha verify check --timeout 60s
+
+# Verify in batches
+npx swarmdo@alpha verify batch --batch-size 10
+```
+
+### Exit Codes
+
+Verification commands return standard exit codes:
+
+- `0`: Verification passed (score ≥ threshold)
+- `1`: Verification failed (score < threshold)
+- `2`: Error during verification (invalid input, system error)
+
+### Related Commands
+
+- `npx swarmdo@alpha pair` - Collaborative development with verification
+- `npx swarmdo@alpha train` - Training with verification feedback
+- `npx swarmdo@alpha swarm` - Multi-agent coordination with quality checks
+- `npx swarmdo@alpha report` - Generate comprehensive project reports
+
+### Best Practices
+
+1. **Set Appropriate Thresholds**: Use 0.99 for critical code, 0.95 for standard, 0.90 for experimental
+2. **Enable Auto-rollback**: Prevent bad code from persisting
+3. **Monitor Trends**: Track improvement over time, not just current scores
+4. **Integrate with CI/CD**: Make verification part of your pipeline
+5. **Use Watch Mode**: Get immediate feedback during development
+6. **Export Metrics**: Track quality metrics in your monitoring system
+7. **Review Rollbacks**: Understand why changes were rejected
+8. **Train Agents**: Use verification feedback to improve agent performance
+
+### Additional Resources
+
+- Truth Scoring Algorithm: See `/docs/truth-scoring.md`
+- Verification Criteria: See `/docs/verification-criteria.md`
+- Integration Examples: See `/examples/verification/`
+- API Reference: See `/docs/api/verification.md`

package/LICENSE

@@ -0,0 +1,21 @@
+MIT License
+
+Copyright (c) 2024-2026 ruvnet
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
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