@smake/eigen 1.1.0 → 1.1.1
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/README.md +1 -1
- package/eigen/Eigen/AccelerateSupport +52 -0
- package/eigen/Eigen/Cholesky +18 -20
- package/eigen/Eigen/CholmodSupport +28 -28
- package/eigen/Eigen/Core +187 -120
- package/eigen/Eigen/Eigenvalues +16 -13
- package/eigen/Eigen/Geometry +18 -18
- package/eigen/Eigen/Householder +9 -7
- package/eigen/Eigen/IterativeLinearSolvers +8 -4
- package/eigen/Eigen/Jacobi +14 -13
- package/eigen/Eigen/KLUSupport +23 -21
- package/eigen/Eigen/LU +15 -16
- package/eigen/Eigen/MetisSupport +12 -12
- package/eigen/Eigen/OrderingMethods +54 -51
- package/eigen/Eigen/PaStiXSupport +23 -21
- package/eigen/Eigen/PardisoSupport +17 -14
- package/eigen/Eigen/QR +18 -20
- package/eigen/Eigen/QtAlignedMalloc +5 -12
- package/eigen/Eigen/SPQRSupport +21 -14
- package/eigen/Eigen/SVD +23 -17
- package/eigen/Eigen/Sparse +1 -2
- package/eigen/Eigen/SparseCholesky +18 -15
- package/eigen/Eigen/SparseCore +18 -17
- package/eigen/Eigen/SparseLU +9 -9
- package/eigen/Eigen/SparseQR +16 -14
- package/eigen/Eigen/StdDeque +5 -2
- package/eigen/Eigen/StdList +5 -2
- package/eigen/Eigen/StdVector +5 -2
- package/eigen/Eigen/SuperLUSupport +30 -24
- package/eigen/Eigen/ThreadPool +80 -0
- package/eigen/Eigen/UmfPackSupport +19 -17
- package/eigen/Eigen/Version +14 -0
- package/eigen/Eigen/src/AccelerateSupport/AccelerateSupport.h +423 -0
- package/eigen/Eigen/src/AccelerateSupport/InternalHeaderCheck.h +3 -0
- package/eigen/Eigen/src/Cholesky/InternalHeaderCheck.h +3 -0
- package/eigen/Eigen/src/Cholesky/LDLT.h +366 -405
- package/eigen/Eigen/src/Cholesky/LLT.h +323 -367
- package/eigen/Eigen/src/Cholesky/LLT_LAPACKE.h +81 -56
- package/eigen/Eigen/src/CholmodSupport/CholmodSupport.h +585 -529
- package/eigen/Eigen/src/CholmodSupport/InternalHeaderCheck.h +3 -0
- package/eigen/Eigen/src/Core/ArithmeticSequence.h +143 -317
- package/eigen/Eigen/src/Core/Array.h +329 -370
- package/eigen/Eigen/src/Core/ArrayBase.h +190 -203
- package/eigen/Eigen/src/Core/ArrayWrapper.h +126 -170
- package/eigen/Eigen/src/Core/Assign.h +30 -40
- package/eigen/Eigen/src/Core/AssignEvaluator.h +651 -604
- package/eigen/Eigen/src/Core/Assign_MKL.h +125 -120
- package/eigen/Eigen/src/Core/BandMatrix.h +267 -282
- package/eigen/Eigen/src/Core/Block.h +371 -390
- package/eigen/Eigen/src/Core/CommaInitializer.h +85 -100
- package/eigen/Eigen/src/Core/ConditionEstimator.h +51 -53
- package/eigen/Eigen/src/Core/CoreEvaluators.h +1214 -937
- package/eigen/Eigen/src/Core/CoreIterators.h +72 -63
- package/eigen/Eigen/src/Core/CwiseBinaryOp.h +112 -129
- package/eigen/Eigen/src/Core/CwiseNullaryOp.h +676 -702
- package/eigen/Eigen/src/Core/CwiseTernaryOp.h +77 -103
- package/eigen/Eigen/src/Core/CwiseUnaryOp.h +55 -67
- package/eigen/Eigen/src/Core/CwiseUnaryView.h +127 -92
- package/eigen/Eigen/src/Core/DenseBase.h +630 -658
- package/eigen/Eigen/src/Core/DenseCoeffsBase.h +511 -628
- package/eigen/Eigen/src/Core/DenseStorage.h +511 -590
- package/eigen/Eigen/src/Core/DeviceWrapper.h +153 -0
- package/eigen/Eigen/src/Core/Diagonal.h +168 -207
- package/eigen/Eigen/src/Core/DiagonalMatrix.h +346 -317
- package/eigen/Eigen/src/Core/DiagonalProduct.h +12 -10
- package/eigen/Eigen/src/Core/Dot.h +167 -217
- package/eigen/Eigen/src/Core/EigenBase.h +74 -85
- package/eigen/Eigen/src/Core/Fill.h +138 -0
- package/eigen/Eigen/src/Core/FindCoeff.h +464 -0
- package/eigen/Eigen/src/Core/ForceAlignedAccess.h +90 -113
- package/eigen/Eigen/src/Core/Fuzzy.h +82 -105
- package/eigen/Eigen/src/Core/GeneralProduct.h +315 -261
- package/eigen/Eigen/src/Core/GenericPacketMath.h +1182 -520
- package/eigen/Eigen/src/Core/GlobalFunctions.h +193 -157
- package/eigen/Eigen/src/Core/IO.h +131 -156
- package/eigen/Eigen/src/Core/IndexedView.h +209 -125
- package/eigen/Eigen/src/Core/InnerProduct.h +260 -0
- package/eigen/Eigen/src/Core/InternalHeaderCheck.h +3 -0
- package/eigen/Eigen/src/Core/Inverse.h +50 -59
- package/eigen/Eigen/src/Core/Map.h +123 -141
- package/eigen/Eigen/src/Core/MapBase.h +255 -282
- package/eigen/Eigen/src/Core/MathFunctions.h +1247 -1201
- package/eigen/Eigen/src/Core/MathFunctionsImpl.h +162 -99
- package/eigen/Eigen/src/Core/Matrix.h +463 -494
- package/eigen/Eigen/src/Core/MatrixBase.h +468 -470
- package/eigen/Eigen/src/Core/NestByValue.h +58 -52
- package/eigen/Eigen/src/Core/NoAlias.h +79 -86
- package/eigen/Eigen/src/Core/NumTraits.h +206 -206
- package/eigen/Eigen/src/Core/PartialReduxEvaluator.h +163 -142
- package/eigen/Eigen/src/Core/PermutationMatrix.h +461 -511
- package/eigen/Eigen/src/Core/PlainObjectBase.h +858 -972
- package/eigen/Eigen/src/Core/Product.h +246 -130
- package/eigen/Eigen/src/Core/ProductEvaluators.h +779 -671
- package/eigen/Eigen/src/Core/Random.h +153 -164
- package/eigen/Eigen/src/Core/RandomImpl.h +262 -0
- package/eigen/Eigen/src/Core/RealView.h +250 -0
- package/eigen/Eigen/src/Core/Redux.h +334 -314
- package/eigen/Eigen/src/Core/Ref.h +259 -257
- package/eigen/Eigen/src/Core/Replicate.h +92 -104
- package/eigen/Eigen/src/Core/Reshaped.h +215 -271
- package/eigen/Eigen/src/Core/ReturnByValue.h +47 -55
- package/eigen/Eigen/src/Core/Reverse.h +133 -148
- package/eigen/Eigen/src/Core/Select.h +68 -140
- package/eigen/Eigen/src/Core/SelfAdjointView.h +254 -290
- package/eigen/Eigen/src/Core/SelfCwiseBinaryOp.h +23 -20
- package/eigen/Eigen/src/Core/SkewSymmetricMatrix3.h +382 -0
- package/eigen/Eigen/src/Core/Solve.h +88 -102
- package/eigen/Eigen/src/Core/SolveTriangular.h +126 -124
- package/eigen/Eigen/src/Core/SolverBase.h +132 -133
- package/eigen/Eigen/src/Core/StableNorm.h +113 -147
- package/eigen/Eigen/src/Core/StlIterators.h +404 -248
- package/eigen/Eigen/src/Core/Stride.h +90 -92
- package/eigen/Eigen/src/Core/Swap.h +70 -39
- package/eigen/Eigen/src/Core/Transpose.h +258 -295
- package/eigen/Eigen/src/Core/Transpositions.h +270 -333
- package/eigen/Eigen/src/Core/TriangularMatrix.h +642 -743
- package/eigen/Eigen/src/Core/VectorBlock.h +59 -72
- package/eigen/Eigen/src/Core/VectorwiseOp.h +653 -704
- package/eigen/Eigen/src/Core/Visitor.h +464 -308
- package/eigen/Eigen/src/Core/arch/AVX/Complex.h +380 -187
- package/eigen/Eigen/src/Core/arch/AVX/MathFunctions.h +65 -163
- package/eigen/Eigen/src/Core/arch/AVX/PacketMath.h +2145 -638
- package/eigen/Eigen/src/Core/arch/AVX/Reductions.h +353 -0
- package/eigen/Eigen/src/Core/arch/AVX/TypeCasting.h +253 -60
- package/eigen/Eigen/src/Core/arch/AVX512/Complex.h +278 -228
- package/eigen/Eigen/src/Core/arch/AVX512/GemmKernel.h +1245 -0
- package/eigen/Eigen/src/Core/arch/AVX512/MathFunctions.h +48 -269
- package/eigen/Eigen/src/Core/arch/AVX512/MathFunctionsFP16.h +75 -0
- package/eigen/Eigen/src/Core/arch/AVX512/PacketMath.h +1597 -754
- package/eigen/Eigen/src/Core/arch/AVX512/PacketMathFP16.h +1413 -0
- package/eigen/Eigen/src/Core/arch/AVX512/Reductions.h +297 -0
- package/eigen/Eigen/src/Core/arch/AVX512/TrsmKernel.h +1167 -0
- package/eigen/Eigen/src/Core/arch/AVX512/TrsmUnrolls.inc +1219 -0
- package/eigen/Eigen/src/Core/arch/AVX512/TypeCasting.h +229 -41
- package/eigen/Eigen/src/Core/arch/AVX512/TypeCastingFP16.h +130 -0
- package/eigen/Eigen/src/Core/arch/AltiVec/Complex.h +420 -184
- package/eigen/Eigen/src/Core/arch/AltiVec/MathFunctions.h +40 -49
- package/eigen/Eigen/src/Core/arch/AltiVec/MatrixProduct.h +2962 -2213
- package/eigen/Eigen/src/Core/arch/AltiVec/MatrixProductCommon.h +196 -212
- package/eigen/Eigen/src/Core/arch/AltiVec/MatrixProductMMA.h +713 -441
- package/eigen/Eigen/src/Core/arch/AltiVec/MatrixProductMMAbfloat16.h +742 -0
- package/eigen/Eigen/src/Core/arch/AltiVec/MatrixVectorProduct.inc +2818 -0
- package/eigen/Eigen/src/Core/arch/AltiVec/PacketMath.h +2380 -1362
- package/eigen/Eigen/src/Core/arch/AltiVec/TypeCasting.h +153 -0
- package/eigen/Eigen/src/Core/arch/Default/BFloat16.h +390 -224
- package/eigen/Eigen/src/Core/arch/Default/ConjHelper.h +78 -67
- package/eigen/Eigen/src/Core/arch/Default/GenericPacketMathFunctions.h +1784 -799
- package/eigen/Eigen/src/Core/arch/Default/GenericPacketMathFunctionsFwd.h +167 -50
- package/eigen/Eigen/src/Core/arch/Default/Half.h +528 -379
- package/eigen/Eigen/src/Core/arch/Default/Settings.h +10 -12
- package/eigen/Eigen/src/Core/arch/GPU/Complex.h +244 -0
- package/eigen/Eigen/src/Core/arch/GPU/MathFunctions.h +41 -40
- package/eigen/Eigen/src/Core/arch/GPU/PacketMath.h +550 -523
- package/eigen/Eigen/src/Core/arch/GPU/Tuple.h +268 -0
- package/eigen/Eigen/src/Core/arch/GPU/TypeCasting.h +27 -30
- package/eigen/Eigen/src/Core/arch/HIP/hcc/math_constants.h +8 -8
- package/eigen/Eigen/src/Core/arch/HVX/PacketMath.h +1088 -0
- package/eigen/Eigen/src/Core/arch/LSX/Complex.h +520 -0
- package/eigen/Eigen/src/Core/arch/LSX/GeneralBlockPanelKernel.h +23 -0
- package/eigen/Eigen/src/Core/arch/LSX/MathFunctions.h +43 -0
- package/eigen/Eigen/src/Core/arch/LSX/PacketMath.h +2866 -0
- package/eigen/Eigen/src/Core/arch/LSX/TypeCasting.h +526 -0
- package/eigen/Eigen/src/Core/arch/MSA/Complex.h +54 -82
- package/eigen/Eigen/src/Core/arch/MSA/MathFunctions.h +84 -92
- package/eigen/Eigen/src/Core/arch/MSA/PacketMath.h +51 -47
- package/eigen/Eigen/src/Core/arch/NEON/Complex.h +454 -306
- package/eigen/Eigen/src/Core/arch/NEON/GeneralBlockPanelKernel.h +175 -115
- package/eigen/Eigen/src/Core/arch/NEON/MathFunctions.h +23 -30
- package/eigen/Eigen/src/Core/arch/NEON/PacketMath.h +4366 -2857
- package/eigen/Eigen/src/Core/arch/NEON/TypeCasting.h +616 -393
- package/eigen/Eigen/src/Core/arch/NEON/UnaryFunctors.h +57 -0
- package/eigen/Eigen/src/Core/arch/SSE/Complex.h +350 -198
- package/eigen/Eigen/src/Core/arch/SSE/MathFunctions.h +38 -149
- package/eigen/Eigen/src/Core/arch/SSE/PacketMath.h +1791 -912
- package/eigen/Eigen/src/Core/arch/SSE/Reductions.h +324 -0
- package/eigen/Eigen/src/Core/arch/SSE/TypeCasting.h +128 -40
- package/eigen/Eigen/src/Core/arch/SVE/MathFunctions.h +10 -6
- package/eigen/Eigen/src/Core/arch/SVE/PacketMath.h +156 -234
- package/eigen/Eigen/src/Core/arch/SVE/TypeCasting.h +6 -3
- package/eigen/Eigen/src/Core/arch/SYCL/InteropHeaders.h +27 -32
- package/eigen/Eigen/src/Core/arch/SYCL/MathFunctions.h +119 -117
- package/eigen/Eigen/src/Core/arch/SYCL/PacketMath.h +325 -419
- package/eigen/Eigen/src/Core/arch/SYCL/TypeCasting.h +15 -17
- package/eigen/Eigen/src/Core/arch/ZVector/Complex.h +325 -181
- package/eigen/Eigen/src/Core/arch/ZVector/MathFunctions.h +94 -83
- package/eigen/Eigen/src/Core/arch/ZVector/PacketMath.h +811 -458
- package/eigen/Eigen/src/Core/functors/AssignmentFunctors.h +121 -124
- package/eigen/Eigen/src/Core/functors/BinaryFunctors.h +576 -370
- package/eigen/Eigen/src/Core/functors/NullaryFunctors.h +194 -109
- package/eigen/Eigen/src/Core/functors/StlFunctors.h +95 -112
- package/eigen/Eigen/src/Core/functors/TernaryFunctors.h +34 -7
- package/eigen/Eigen/src/Core/functors/UnaryFunctors.h +1038 -749
- package/eigen/Eigen/src/Core/products/GeneralBlockPanelKernel.h +1883 -1375
- package/eigen/Eigen/src/Core/products/GeneralMatrixMatrix.h +312 -370
- package/eigen/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h +189 -176
- package/eigen/Eigen/src/Core/products/GeneralMatrixMatrixTriangular_BLAS.h +84 -81
- package/eigen/Eigen/src/Core/products/GeneralMatrixMatrix_BLAS.h +154 -73
- package/eigen/Eigen/src/Core/products/GeneralMatrixVector.h +292 -337
- package/eigen/Eigen/src/Core/products/GeneralMatrixVector_BLAS.h +80 -77
- package/eigen/Eigen/src/Core/products/Parallelizer.h +207 -105
- package/eigen/Eigen/src/Core/products/SelfadjointMatrixMatrix.h +327 -388
- package/eigen/Eigen/src/Core/products/SelfadjointMatrixMatrix_BLAS.h +206 -224
- package/eigen/Eigen/src/Core/products/SelfadjointMatrixVector.h +138 -147
- package/eigen/Eigen/src/Core/products/SelfadjointMatrixVector_BLAS.h +58 -61
- package/eigen/Eigen/src/Core/products/SelfadjointProduct.h +71 -71
- package/eigen/Eigen/src/Core/products/SelfadjointRank2Update.h +48 -47
- package/eigen/Eigen/src/Core/products/TriangularMatrixMatrix.h +294 -369
- package/eigen/Eigen/src/Core/products/TriangularMatrixMatrix_BLAS.h +246 -238
- package/eigen/Eigen/src/Core/products/TriangularMatrixVector.h +244 -247
- package/eigen/Eigen/src/Core/products/TriangularMatrixVector_BLAS.h +212 -192
- package/eigen/Eigen/src/Core/products/TriangularSolverMatrix.h +328 -277
- package/eigen/Eigen/src/Core/products/TriangularSolverMatrix_BLAS.h +108 -109
- package/eigen/Eigen/src/Core/products/TriangularSolverVector.h +68 -94
- package/eigen/Eigen/src/Core/util/Assert.h +158 -0
- package/eigen/Eigen/src/Core/util/BlasUtil.h +342 -303
- package/eigen/Eigen/src/Core/util/ConfigureVectorization.h +348 -317
- package/eigen/Eigen/src/Core/util/Constants.h +297 -262
- package/eigen/Eigen/src/Core/util/DisableStupidWarnings.h +130 -90
- package/eigen/Eigen/src/Core/util/EmulateArray.h +270 -0
- package/eigen/Eigen/src/Core/util/ForwardDeclarations.h +449 -247
- package/eigen/Eigen/src/Core/util/GpuHipCudaDefines.inc +101 -0
- package/eigen/Eigen/src/Core/util/GpuHipCudaUndefines.inc +45 -0
- package/eigen/Eigen/src/Core/util/IndexedViewHelper.h +417 -116
- package/eigen/Eigen/src/Core/util/IntegralConstant.h +211 -204
- package/eigen/Eigen/src/Core/util/MKL_support.h +39 -37
- package/eigen/Eigen/src/Core/util/Macros.h +655 -773
- package/eigen/Eigen/src/Core/util/MaxSizeVector.h +139 -0
- package/eigen/Eigen/src/Core/util/Memory.h +970 -748
- package/eigen/Eigen/src/Core/util/Meta.h +581 -633
- package/eigen/Eigen/src/Core/util/MoreMeta.h +638 -0
- package/eigen/Eigen/src/Core/util/ReenableStupidWarnings.h +32 -19
- package/eigen/Eigen/src/Core/util/ReshapedHelper.h +17 -17
- package/eigen/Eigen/src/Core/util/Serializer.h +209 -0
- package/eigen/Eigen/src/Core/util/StaticAssert.h +50 -166
- package/eigen/Eigen/src/Core/util/SymbolicIndex.h +377 -225
- package/eigen/Eigen/src/Core/util/XprHelper.h +784 -547
- package/eigen/Eigen/src/Eigenvalues/ComplexEigenSolver.h +246 -277
- package/eigen/Eigen/src/Eigenvalues/ComplexSchur.h +299 -319
- package/eigen/Eigen/src/Eigenvalues/ComplexSchur_LAPACKE.h +52 -48
- package/eigen/Eigen/src/Eigenvalues/EigenSolver.h +413 -456
- package/eigen/Eigen/src/Eigenvalues/GeneralizedEigenSolver.h +309 -325
- package/eigen/Eigen/src/Eigenvalues/GeneralizedSelfAdjointEigenSolver.h +157 -171
- package/eigen/Eigen/src/Eigenvalues/HessenbergDecomposition.h +292 -310
- package/eigen/Eigen/src/Eigenvalues/InternalHeaderCheck.h +3 -0
- package/eigen/Eigen/src/Eigenvalues/MatrixBaseEigenvalues.h +89 -105
- package/eigen/Eigen/src/Eigenvalues/RealQZ.h +537 -607
- package/eigen/Eigen/src/Eigenvalues/RealSchur.h +342 -381
- package/eigen/Eigen/src/Eigenvalues/RealSchur_LAPACKE.h +41 -35
- package/eigen/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h +541 -595
- package/eigen/Eigen/src/Eigenvalues/SelfAdjointEigenSolver_LAPACKE.h +47 -44
- package/eigen/Eigen/src/Eigenvalues/Tridiagonalization.h +430 -462
- package/eigen/Eigen/src/Geometry/AlignedBox.h +226 -227
- package/eigen/Eigen/src/Geometry/AngleAxis.h +131 -133
- package/eigen/Eigen/src/Geometry/EulerAngles.h +163 -74
- package/eigen/Eigen/src/Geometry/Homogeneous.h +285 -333
- package/eigen/Eigen/src/Geometry/Hyperplane.h +151 -160
- package/eigen/Eigen/src/Geometry/InternalHeaderCheck.h +3 -0
- package/eigen/Eigen/src/Geometry/OrthoMethods.h +168 -146
- package/eigen/Eigen/src/Geometry/ParametrizedLine.h +127 -127
- package/eigen/Eigen/src/Geometry/Quaternion.h +566 -506
- package/eigen/Eigen/src/Geometry/Rotation2D.h +107 -105
- package/eigen/Eigen/src/Geometry/RotationBase.h +148 -145
- package/eigen/Eigen/src/Geometry/Scaling.h +113 -106
- package/eigen/Eigen/src/Geometry/Transform.h +858 -936
- package/eigen/Eigen/src/Geometry/Translation.h +94 -92
- package/eigen/Eigen/src/Geometry/Umeyama.h +79 -84
- package/eigen/Eigen/src/Geometry/arch/Geometry_SIMD.h +90 -104
- package/eigen/Eigen/src/Householder/BlockHouseholder.h +51 -46
- package/eigen/Eigen/src/Householder/Householder.h +102 -124
- package/eigen/Eigen/src/Householder/HouseholderSequence.h +412 -453
- package/eigen/Eigen/src/Householder/InternalHeaderCheck.h +3 -0
- package/eigen/Eigen/src/IterativeLinearSolvers/BasicPreconditioners.h +149 -162
- package/eigen/Eigen/src/IterativeLinearSolvers/BiCGSTAB.h +124 -119
- package/eigen/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h +92 -104
- package/eigen/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h +251 -243
- package/eigen/Eigen/src/IterativeLinearSolvers/IncompleteLUT.h +224 -228
- package/eigen/Eigen/src/IterativeLinearSolvers/InternalHeaderCheck.h +3 -0
- package/eigen/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h +178 -227
- package/eigen/Eigen/src/IterativeLinearSolvers/LeastSquareConjugateGradient.h +79 -84
- package/eigen/Eigen/src/IterativeLinearSolvers/SolveWithGuess.h +54 -60
- package/eigen/Eigen/src/Jacobi/InternalHeaderCheck.h +3 -0
- package/eigen/Eigen/src/Jacobi/Jacobi.h +252 -308
- package/eigen/Eigen/src/KLUSupport/InternalHeaderCheck.h +3 -0
- package/eigen/Eigen/src/KLUSupport/KLUSupport.h +208 -227
- package/eigen/Eigen/src/LU/Determinant.h +50 -69
- package/eigen/Eigen/src/LU/FullPivLU.h +545 -596
- package/eigen/Eigen/src/LU/InternalHeaderCheck.h +3 -0
- package/eigen/Eigen/src/LU/InverseImpl.h +206 -285
- package/eigen/Eigen/src/LU/PartialPivLU.h +390 -428
- package/eigen/Eigen/src/LU/PartialPivLU_LAPACKE.h +54 -40
- package/eigen/Eigen/src/LU/arch/InverseSize4.h +72 -70
- package/eigen/Eigen/src/MetisSupport/InternalHeaderCheck.h +3 -0
- package/eigen/Eigen/src/MetisSupport/MetisSupport.h +81 -93
- package/eigen/Eigen/src/OrderingMethods/Amd.h +243 -265
- package/eigen/Eigen/src/OrderingMethods/Eigen_Colamd.h +831 -1004
- package/eigen/Eigen/src/OrderingMethods/InternalHeaderCheck.h +3 -0
- package/eigen/Eigen/src/OrderingMethods/Ordering.h +112 -119
- package/eigen/Eigen/src/PaStiXSupport/InternalHeaderCheck.h +3 -0
- package/eigen/Eigen/src/PaStiXSupport/PaStiXSupport.h +524 -570
- package/eigen/Eigen/src/PardisoSupport/InternalHeaderCheck.h +3 -0
- package/eigen/Eigen/src/PardisoSupport/PardisoSupport.h +385 -430
- package/eigen/Eigen/src/QR/ColPivHouseholderQR.h +479 -479
- package/eigen/Eigen/src/QR/ColPivHouseholderQR_LAPACKE.h +120 -56
- package/eigen/Eigen/src/QR/CompleteOrthogonalDecomposition.h +166 -153
- package/eigen/Eigen/src/QR/FullPivHouseholderQR.h +495 -475
- package/eigen/Eigen/src/QR/HouseholderQR.h +394 -285
- package/eigen/Eigen/src/QR/HouseholderQR_LAPACKE.h +32 -23
- package/eigen/Eigen/src/QR/InternalHeaderCheck.h +3 -0
- package/eigen/Eigen/src/SPQRSupport/InternalHeaderCheck.h +3 -0
- package/eigen/Eigen/src/SPQRSupport/SuiteSparseQRSupport.h +244 -264
- package/eigen/Eigen/src/SVD/BDCSVD.h +817 -713
- package/eigen/Eigen/src/SVD/BDCSVD_LAPACKE.h +174 -0
- package/eigen/Eigen/src/SVD/InternalHeaderCheck.h +3 -0
- package/eigen/Eigen/src/SVD/JacobiSVD.h +577 -543
- package/eigen/Eigen/src/SVD/JacobiSVD_LAPACKE.h +85 -49
- package/eigen/Eigen/src/SVD/SVDBase.h +242 -182
- package/eigen/Eigen/src/SVD/UpperBidiagonalization.h +200 -235
- package/eigen/Eigen/src/SparseCholesky/InternalHeaderCheck.h +3 -0
- package/eigen/Eigen/src/SparseCholesky/SimplicialCholesky.h +765 -594
- package/eigen/Eigen/src/SparseCholesky/SimplicialCholesky_impl.h +308 -94
- package/eigen/Eigen/src/SparseCore/AmbiVector.h +202 -251
- package/eigen/Eigen/src/SparseCore/CompressedStorage.h +184 -252
- package/eigen/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h +134 -178
- package/eigen/Eigen/src/SparseCore/InternalHeaderCheck.h +3 -0
- package/eigen/Eigen/src/SparseCore/SparseAssign.h +149 -140
- package/eigen/Eigen/src/SparseCore/SparseBlock.h +403 -440
- package/eigen/Eigen/src/SparseCore/SparseColEtree.h +100 -112
- package/eigen/Eigen/src/SparseCore/SparseCompressedBase.h +525 -303
- package/eigen/Eigen/src/SparseCore/SparseCwiseBinaryOp.h +555 -339
- package/eigen/Eigen/src/SparseCore/SparseCwiseUnaryOp.h +100 -108
- package/eigen/Eigen/src/SparseCore/SparseDenseProduct.h +169 -197
- package/eigen/Eigen/src/SparseCore/SparseDiagonalProduct.h +71 -71
- package/eigen/Eigen/src/SparseCore/SparseDot.h +49 -47
- package/eigen/Eigen/src/SparseCore/SparseFuzzy.h +13 -11
- package/eigen/Eigen/src/SparseCore/SparseMap.h +243 -253
- package/eigen/Eigen/src/SparseCore/SparseMatrix.h +1603 -1245
- package/eigen/Eigen/src/SparseCore/SparseMatrixBase.h +403 -350
- package/eigen/Eigen/src/SparseCore/SparsePermutation.h +186 -115
- package/eigen/Eigen/src/SparseCore/SparseProduct.h +94 -97
- package/eigen/Eigen/src/SparseCore/SparseRedux.h +22 -24
- package/eigen/Eigen/src/SparseCore/SparseRef.h +268 -295
- package/eigen/Eigen/src/SparseCore/SparseSelfAdjointView.h +370 -416
- package/eigen/Eigen/src/SparseCore/SparseSolverBase.h +78 -87
- package/eigen/Eigen/src/SparseCore/SparseSparseProductWithPruning.h +81 -95
- package/eigen/Eigen/src/SparseCore/SparseTranspose.h +62 -71
- package/eigen/Eigen/src/SparseCore/SparseTriangularView.h +132 -144
- package/eigen/Eigen/src/SparseCore/SparseUtil.h +138 -115
- package/eigen/Eigen/src/SparseCore/SparseVector.h +426 -372
- package/eigen/Eigen/src/SparseCore/SparseView.h +164 -193
- package/eigen/Eigen/src/SparseCore/TriangularSolver.h +129 -170
- package/eigen/Eigen/src/SparseLU/InternalHeaderCheck.h +3 -0
- package/eigen/Eigen/src/SparseLU/SparseLU.h +756 -710
- package/eigen/Eigen/src/SparseLU/SparseLUImpl.h +61 -48
- package/eigen/Eigen/src/SparseLU/SparseLU_Memory.h +102 -118
- package/eigen/Eigen/src/SparseLU/SparseLU_Structs.h +38 -35
- package/eigen/Eigen/src/SparseLU/SparseLU_SupernodalMatrix.h +245 -301
- package/eigen/Eigen/src/SparseLU/SparseLU_Utils.h +44 -49
- package/eigen/Eigen/src/SparseLU/SparseLU_column_bmod.h +104 -108
- package/eigen/Eigen/src/SparseLU/SparseLU_column_dfs.h +89 -100
- package/eigen/Eigen/src/SparseLU/SparseLU_copy_to_ucol.h +57 -58
- package/eigen/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h +43 -55
- package/eigen/Eigen/src/SparseLU/SparseLU_kernel_bmod.h +74 -71
- package/eigen/Eigen/src/SparseLU/SparseLU_panel_bmod.h +124 -132
- package/eigen/Eigen/src/SparseLU/SparseLU_panel_dfs.h +136 -159
- package/eigen/Eigen/src/SparseLU/SparseLU_pivotL.h +51 -52
- package/eigen/Eigen/src/SparseLU/SparseLU_pruneL.h +67 -73
- package/eigen/Eigen/src/SparseLU/SparseLU_relax_snode.h +24 -26
- package/eigen/Eigen/src/SparseQR/InternalHeaderCheck.h +3 -0
- package/eigen/Eigen/src/SparseQR/SparseQR.h +450 -502
- package/eigen/Eigen/src/StlSupport/StdDeque.h +28 -93
- package/eigen/Eigen/src/StlSupport/StdList.h +28 -84
- package/eigen/Eigen/src/StlSupport/StdVector.h +28 -108
- package/eigen/Eigen/src/StlSupport/details.h +48 -50
- package/eigen/Eigen/src/SuperLUSupport/InternalHeaderCheck.h +3 -0
- package/eigen/Eigen/src/SuperLUSupport/SuperLUSupport.h +634 -730
- package/eigen/Eigen/src/ThreadPool/Barrier.h +70 -0
- package/eigen/Eigen/src/ThreadPool/CoreThreadPoolDevice.h +336 -0
- package/eigen/Eigen/src/ThreadPool/EventCount.h +241 -0
- package/eigen/Eigen/src/ThreadPool/ForkJoin.h +140 -0
- package/eigen/Eigen/src/ThreadPool/InternalHeaderCheck.h +4 -0
- package/eigen/Eigen/src/ThreadPool/NonBlockingThreadPool.h +587 -0
- package/eigen/Eigen/src/ThreadPool/RunQueue.h +230 -0
- package/eigen/Eigen/src/ThreadPool/ThreadCancel.h +21 -0
- package/eigen/Eigen/src/ThreadPool/ThreadEnvironment.h +43 -0
- package/eigen/Eigen/src/ThreadPool/ThreadLocal.h +289 -0
- package/eigen/Eigen/src/ThreadPool/ThreadPoolInterface.h +50 -0
- package/eigen/Eigen/src/ThreadPool/ThreadYield.h +16 -0
- package/eigen/Eigen/src/UmfPackSupport/InternalHeaderCheck.h +3 -0
- package/eigen/Eigen/src/UmfPackSupport/UmfPackSupport.h +428 -464
- package/eigen/Eigen/src/misc/Image.h +41 -43
- package/eigen/Eigen/src/misc/InternalHeaderCheck.h +3 -0
- package/eigen/Eigen/src/misc/Kernel.h +39 -41
- package/eigen/Eigen/src/misc/RealSvd2x2.h +19 -21
- package/eigen/Eigen/src/misc/blas.h +83 -426
- package/eigen/Eigen/src/misc/lapacke.h +9972 -16179
- package/eigen/Eigen/src/misc/lapacke_helpers.h +163 -0
- package/eigen/Eigen/src/misc/lapacke_mangling.h +4 -5
- package/eigen/Eigen/src/plugins/ArrayCwiseBinaryOps.inc +344 -0
- package/eigen/Eigen/src/plugins/ArrayCwiseUnaryOps.inc +544 -0
- package/eigen/Eigen/src/plugins/{BlockMethods.h → BlockMethods.inc} +434 -506
- package/eigen/Eigen/src/plugins/CommonCwiseBinaryOps.inc +116 -0
- package/eigen/Eigen/src/plugins/{CommonCwiseUnaryOps.h → CommonCwiseUnaryOps.inc} +58 -68
- package/eigen/Eigen/src/plugins/IndexedViewMethods.inc +192 -0
- package/eigen/Eigen/src/plugins/InternalHeaderCheck.inc +3 -0
- package/eigen/Eigen/src/plugins/MatrixCwiseBinaryOps.inc +331 -0
- package/eigen/Eigen/src/plugins/MatrixCwiseUnaryOps.inc +118 -0
- package/eigen/Eigen/src/plugins/ReshapedMethods.inc +133 -0
- package/package.json +1 -1
- package/eigen/COPYING.APACHE +0 -203
- package/eigen/COPYING.BSD +0 -26
- package/eigen/COPYING.GPL +0 -674
- package/eigen/COPYING.LGPL +0 -502
- package/eigen/COPYING.MINPACK +0 -51
- package/eigen/COPYING.MPL2 +0 -373
- package/eigen/COPYING.README +0 -18
- package/eigen/Eigen/src/Core/BooleanRedux.h +0 -162
- package/eigen/Eigen/src/Core/arch/CUDA/Complex.h +0 -258
- package/eigen/Eigen/src/Core/arch/Default/TypeCasting.h +0 -120
- package/eigen/Eigen/src/Core/arch/SYCL/SyclMemoryModel.h +0 -694
- package/eigen/Eigen/src/Core/util/NonMPL2.h +0 -3
- package/eigen/Eigen/src/SparseCore/MappedSparseMatrix.h +0 -67
- package/eigen/Eigen/src/SparseLU/SparseLU_gemm_kernel.h +0 -280
- package/eigen/Eigen/src/misc/lapack.h +0 -152
- package/eigen/Eigen/src/plugins/ArrayCwiseBinaryOps.h +0 -358
- package/eigen/Eigen/src/plugins/ArrayCwiseUnaryOps.h +0 -696
- package/eigen/Eigen/src/plugins/CommonCwiseBinaryOps.h +0 -115
- package/eigen/Eigen/src/plugins/IndexedViewMethods.h +0 -262
- package/eigen/Eigen/src/plugins/MatrixCwiseBinaryOps.h +0 -152
- package/eigen/Eigen/src/plugins/MatrixCwiseUnaryOps.h +0 -95
- package/eigen/Eigen/src/plugins/ReshapedMethods.h +0 -149
- package/eigen/README.md +0 -5
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#ifndef EIGEN_CHOLMODSUPPORT_H
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#define EIGEN_CHOLMODSUPPORT_H
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// IWYU pragma: private
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#include "./InternalHeaderCheck.h"
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namespace Eigen {
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namespace internal {
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template<typename Scalar>
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template <typename Scalar>
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struct cholmod_configure_matrix;
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template<>
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template <>
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struct cholmod_configure_matrix<double> {
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template <typename CholmodType>
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static void run(CholmodType& mat) {
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mat.xtype = CHOLMOD_REAL;
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mat.dtype = CHOLMOD_DOUBLE;
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}
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};
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template<>
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template <>
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struct cholmod_configure_matrix<std::complex<double> > {
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template <typename CholmodType>
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static void run(CholmodType& mat) {
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mat.xtype = CHOLMOD_COMPLEX;
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mat.dtype = CHOLMOD_DOUBLE;
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@@ -49,103 +55,92 @@ template<> struct cholmod_configure_matrix<std::complex<double> > {
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// }
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// };
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}
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} // namespace internal
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/** Wraps the Eigen sparse matrix \a mat into a Cholmod sparse matrix object.
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template<typename
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cholmod_sparse viewAsCholmod(Ref<SparseMatrix<
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{
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* Note that the data are shared.
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*/
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template <typename Scalar_, int Options_, typename StorageIndex_>
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cholmod_sparse viewAsCholmod(Ref<SparseMatrix<Scalar_, Options_, StorageIndex_> > mat) {
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cholmod_sparse res;
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res.nzmax
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res.x
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res.z
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res.sorted
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if(mat.isCompressed())
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res.packed = 1;
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res.nzmax = mat.nonZeros();
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res.nrow = mat.rows();
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res.ncol = mat.cols();
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res.p = mat.outerIndexPtr();
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res.i = mat.innerIndexPtr();
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res.x = mat.valuePtr();
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res.sorted = 1;
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if (mat.isCompressed()) {
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res.packed = 1;
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}
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{
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} else {
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res.packed = 0;
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res.nz = mat.innerNonZeroPtr();
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}
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res.stype
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res.stype = -1;
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if (internal::is_same<
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{
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if (internal::is_same<StorageIndex_, int>::value) {
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res.itype = CHOLMOD_INT;
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}
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else if (internal::is_same<_StorageIndex,SuiteSparse_long>::value)
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{
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} else if (internal::is_same<StorageIndex_, SuiteSparse_long>::value) {
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res.itype = CHOLMOD_LONG;
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}
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else
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{
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} else {
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eigen_assert(false && "Index type not supported yet");
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}
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// setup res.xtype
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internal::cholmod_configure_matrix<
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internal::cholmod_configure_matrix<Scalar_>::run(res);
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res.stype = 0;
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return res;
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}
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template<typename
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const cholmod_sparse viewAsCholmod(const SparseMatrix<
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cholmod_sparse res = viewAsCholmod(Ref<SparseMatrix<_Scalar,_Options,_Index> >(mat.const_cast_derived()));
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template <typename Scalar_, int Options_, typename Index_>
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const cholmod_sparse viewAsCholmod(const SparseMatrix<Scalar_, Options_, Index_>& mat) {
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cholmod_sparse res = viewAsCholmod(Ref<SparseMatrix<Scalar_, Options_, Index_> >(mat.const_cast_derived()));
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}
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template<typename
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const cholmod_sparse viewAsCholmod(const SparseVector<
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cholmod_sparse res = viewAsCholmod(Ref<SparseMatrix<_Scalar,_Options,_Index> >(mat.const_cast_derived()));
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template <typename Scalar_, int Options_, typename Index_>
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const cholmod_sparse viewAsCholmod(const SparseVector<Scalar_, Options_, Index_>& mat) {
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cholmod_sparse res = viewAsCholmod(Ref<SparseMatrix<Scalar_, Options_, Index_> >(mat.const_cast_derived()));
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}
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/** Returns a view of the Eigen sparse matrix \a mat as Cholmod sparse matrix.
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template<typename
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cholmod_sparse viewAsCholmod(const SparseSelfAdjointView<const SparseMatrix<
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if(UpLo==
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if(UpLo==Lower) res.stype = -1;
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template <typename Scalar_, int Options_, typename Index_, unsigned int UpLo>
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cholmod_sparse viewAsCholmod(const SparseSelfAdjointView<const SparseMatrix<Scalar_, Options_, Index_>, UpLo>& mat) {
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cholmod_sparse res = viewAsCholmod(Ref<SparseMatrix<Scalar_, Options_, Index_> >(mat.matrix().const_cast_derived()));
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if (UpLo == Upper) res.stype = 1;
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if (UpLo == Lower) res.stype = -1;
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EIGEN_STATIC_ASSERT((
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EIGEN_STATIC_ASSERT((Options_ & RowMajorBit) == 0 || NumTraits<Scalar_>::IsComplex == 0,
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THIS_METHOD_IS_ONLY_FOR_COLUMN_MAJOR_MATRICES);
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if (Options_ & RowMajorBit) res.stype *= -1;
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return res;
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}
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/** Returns a view of the Eigen \b dense matrix \a mat as Cholmod dense matrix.
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cholmod_dense viewAsCholmod(MatrixBase<Derived>& mat)
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template <typename Derived>
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cholmod_dense viewAsCholmod(MatrixBase<Derived>& mat) {
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EIGEN_STATIC_ASSERT((internal::traits<Derived>::Flags & RowMajorBit) == 0,
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THIS_METHOD_IS_ONLY_FOR_COLUMN_MAJOR_MATRICES);
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cholmod_dense res;
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res.nrow = mat.rows();
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res.ncol = mat.cols();
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res.nzmax = res.nrow * res.ncol;
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res.d = Derived::IsVectorAtCompileTime ? mat.derived().size() : mat.derived().outerStride();
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res.x = (void*)(mat.derived().data());
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res.z = 0;
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internal::cholmod_configure_matrix<Scalar>::run(res);
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/** Returns a view of the Cholmod sparse matrix \a cm as an Eigen sparse matrix.
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template <typename Scalar, typename StorageIndex>
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Map<const SparseMatrix<Scalar, ColMajor, StorageIndex> > viewAsEigen(cholmod_sparse& cm) {
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return Map<const SparseMatrix<Scalar, ColMajor, StorageIndex> >(
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cm.nrow, cm.ncol, static_cast<StorageIndex*>(cm.p)[cm.ncol], static_cast<StorageIndex*>(cm.p),
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static_cast<StorageIndex*>(cm.i), static_cast<Scalar*>(cm.x));
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}
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/** Returns a view of the Cholmod sparse matrix factor \a cm as an Eigen sparse matrix.
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* The data are not copied but shared. */
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Map<const SparseMatrix<Scalar, ColMajor, StorageIndex> > viewAsEigen(cholmod_factor& cm) {
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cm.n, cm.n, static_cast<StorageIndex*>(cm.p)[cm.n], static_cast<StorageIndex*>(cm.p),
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static_cast<StorageIndex*>(cm.i), static_cast<Scalar*>(cm.x));
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namespace internal {
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// template specializations for int and long that call the correct cholmod method
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#define EIGEN_CHOLMOD_SPECIALIZE0(ret, name)
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#define EIGEN_CHOLMOD_SPECIALIZE0(ret, name) \
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template <typename StorageIndex_> \
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inline ret cm_##name(cholmod_common& Common) { \
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} \
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template <> \
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inline ret cm_##name<SuiteSparse_long>(cholmod_common & Common) { \
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return cholmod_l_##name(&Common); \
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}
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#define EIGEN_CHOLMOD_SPECIALIZE1(ret, name, t1, a1)
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#define EIGEN_CHOLMOD_SPECIALIZE1(ret, name, t1, a1) \
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template <typename StorageIndex_> \
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inline ret cm_##name(t1& a1, cholmod_common& Common) { \
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return cholmod_##name(&a1, &Common); \
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} \
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template <> \
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inline ret cm_##name<SuiteSparse_long>(t1 & a1, cholmod_common & Common) { \
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return cholmod_l_##name(&a1, &Common); \
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}
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EIGEN_CHOLMOD_SPECIALIZE0(int, start)
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EIGEN_CHOLMOD_SPECIALIZE0(int, finish)
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EIGEN_CHOLMOD_SPECIALIZE1(int, free_factor, cholmod_factor*, L)
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EIGEN_CHOLMOD_SPECIALIZE1(int, free_dense,
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EIGEN_CHOLMOD_SPECIALIZE1(int, free_dense, cholmod_dense*, X)
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EIGEN_CHOLMOD_SPECIALIZE1(int, free_sparse, cholmod_sparse*, A)
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EIGEN_CHOLMOD_SPECIALIZE1(cholmod_factor*, analyze, cholmod_sparse, A)
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EIGEN_CHOLMOD_SPECIALIZE1(cholmod_sparse*, factor_to_sparse, cholmod_factor, L)
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template<typename
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template <typename StorageIndex_>
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inline cholmod_dense* cm_solve(int sys, cholmod_factor& L, cholmod_dense& B, cholmod_common& Common) {
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return cholmod_solve(sys, &L, &B, &Common);
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}
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template <>
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inline cholmod_dense* cm_solve<SuiteSparse_long>(int sys, cholmod_factor& L, cholmod_dense& B, cholmod_common& Common) {
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return cholmod_l_solve(sys, &L, &B, &Common);
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}
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template<typename
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template <typename StorageIndex_>
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inline cholmod_sparse* cm_spsolve(int sys, cholmod_factor& L, cholmod_sparse& B, cholmod_common& Common) {
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return cholmod_spsolve(sys, &L, &B, &Common);
|
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|
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}
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template <>
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|
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inline cholmod_sparse* cm_spsolve<SuiteSparse_long>(int sys, cholmod_factor& L, cholmod_sparse& B,
|
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|
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cholmod_common& Common) {
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return cholmod_l_spsolve(sys, &L, &B, &Common);
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}
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template<typename
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inline int
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template <typename StorageIndex_>
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inline int cm_factorize_p(cholmod_sparse* A, double beta[2], StorageIndex_* fset, std::size_t fsize, cholmod_factor* L,
|
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cholmod_common& Common) {
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return cholmod_factorize_p(A, beta, fset, fsize, L, &Common);
|
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|
+
}
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template <>
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inline int cm_factorize_p<SuiteSparse_long>(cholmod_sparse* A, double beta[2], SuiteSparse_long* fset,
|
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|
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std::size_t fsize, cholmod_factor* L, cholmod_common& Common) {
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return cholmod_l_factorize_p(A, beta, fset, fsize, L, &Common);
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}
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#undef EIGEN_CHOLMOD_SPECIALIZE0
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#undef EIGEN_CHOLMOD_SPECIALIZE1
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} // namespace internal
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enum CholmodMode { CholmodAuto, CholmodSimplicialLLt, CholmodSupernodalLLt, CholmodLDLt };
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/** \ingroup CholmodSupport_Module
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* \class CholmodBase
|
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* \brief The base class for the direct Cholesky factorization of Cholmod
|
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* \sa class CholmodSupernodalLLT, class CholmodSimplicialLDLT, class CholmodSimplicialLLT
|
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*/
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|
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template <typename MatrixType_, int UpLo_, typename Derived>
|
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|
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class CholmodBase : public SparseSolverBase<Derived> {
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protected:
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typedef SparseSolverBase<Derived> Base;
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using Base::derived;
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using Base::m_isInitialized;
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public:
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typedef MatrixType_ MatrixType;
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enum { UpLo = UpLo_ };
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typedef typename MatrixType::Scalar Scalar;
|
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|
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typedef typename MatrixType::RealScalar RealScalar;
|
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|
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typedef MatrixType CholMatrixType;
|
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|
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typedef typename MatrixType::StorageIndex StorageIndex;
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|
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enum { ColsAtCompileTime = MatrixType::ColsAtCompileTime, MaxColsAtCompileTime = MatrixType::MaxColsAtCompileTime };
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|
+
|
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|
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public:
|
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|
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CholmodBase() : m_cholmodFactor(0), m_info(Success), m_factorizationIsOk(false), m_analysisIsOk(false) {
|
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|
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EIGEN_STATIC_ASSERT((internal::is_same<double, RealScalar>::value), CHOLMOD_SUPPORTS_DOUBLE_PRECISION_ONLY);
|
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|
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m_shiftOffset[0] = m_shiftOffset[1] = 0.0;
|
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|
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internal::cm_start<StorageIndex>(m_cholmod);
|
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|
+
}
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266
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267
|
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explicit CholmodBase(const MatrixType& matrix)
|
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|
+
: m_cholmodFactor(0), m_info(Success), m_factorizationIsOk(false), m_analysisIsOk(false) {
|
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|
+
EIGEN_STATIC_ASSERT((internal::is_same<double, RealScalar>::value), CHOLMOD_SUPPORTS_DOUBLE_PRECISION_ONLY);
|
|
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|
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m_shiftOffset[0] = m_shiftOffset[1] = 0.0;
|
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|
+
internal::cm_start<StorageIndex>(m_cholmod);
|
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|
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compute(matrix);
|
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|
+
}
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|
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*/
|
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|
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template<typename _MatrixType, int _UpLo, typename Derived>
|
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214
|
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class CholmodBase : public SparseSolverBase<Derived>
|
|
215
|
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{
|
|
216
|
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protected:
|
|
217
|
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typedef SparseSolverBase<Derived> Base;
|
|
218
|
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using Base::derived;
|
|
219
|
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using Base::m_isInitialized;
|
|
220
|
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public:
|
|
221
|
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typedef _MatrixType MatrixType;
|
|
222
|
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enum { UpLo = _UpLo };
|
|
223
|
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typedef typename MatrixType::Scalar Scalar;
|
|
224
|
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typedef typename MatrixType::RealScalar RealScalar;
|
|
225
|
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typedef MatrixType CholMatrixType;
|
|
226
|
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typedef typename MatrixType::StorageIndex StorageIndex;
|
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|
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enum {
|
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228
|
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ColsAtCompileTime = MatrixType::ColsAtCompileTime,
|
|
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|
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MaxColsAtCompileTime = MatrixType::MaxColsAtCompileTime
|
|
230
|
-
};
|
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231
|
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|
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232
|
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public:
|
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233
|
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|
|
234
|
-
CholmodBase()
|
|
235
|
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: m_cholmodFactor(0), m_info(Success), m_factorizationIsOk(false), m_analysisIsOk(false)
|
|
236
|
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{
|
|
237
|
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EIGEN_STATIC_ASSERT((internal::is_same<double,RealScalar>::value), CHOLMOD_SUPPORTS_DOUBLE_PRECISION_ONLY);
|
|
238
|
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m_shiftOffset[0] = m_shiftOffset[1] = 0.0;
|
|
239
|
-
internal::cm_start<StorageIndex>(m_cholmod);
|
|
240
|
-
}
|
|
275
|
+
~CholmodBase() {
|
|
276
|
+
if (m_cholmodFactor) internal::cm_free_factor<StorageIndex>(m_cholmodFactor, m_cholmod);
|
|
277
|
+
internal::cm_finish<StorageIndex>(m_cholmod);
|
|
278
|
+
}
|
|
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279
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|
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280
|
+
inline StorageIndex cols() const { return internal::convert_index<StorageIndex, Index>(m_cholmodFactor->n); }
|
|
281
|
+
inline StorageIndex rows() const { return internal::convert_index<StorageIndex, Index>(m_cholmodFactor->n); }
|
|
282
|
+
|
|
283
|
+
/** \brief Reports whether previous computation was successful.
|
|
284
|
+
*
|
|
285
|
+
* \returns \c Success if computation was successful,
|
|
286
|
+
* \c NumericalIssue if the matrix.appears to be negative.
|
|
287
|
+
*/
|
|
288
|
+
ComputationInfo info() const {
|
|
289
|
+
eigen_assert(m_isInitialized && "Decomposition is not initialized.");
|
|
290
|
+
return m_info;
|
|
291
|
+
}
|
|
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|
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|
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|
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|
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|
|
293
|
+
/** Computes the sparse Cholesky decomposition of \a matrix */
|
|
294
|
+
Derived& compute(const MatrixType& matrix) {
|
|
295
|
+
analyzePattern(matrix);
|
|
296
|
+
factorize(matrix);
|
|
297
|
+
return derived();
|
|
298
|
+
}
|
|
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|
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|
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268
|
-
eigen_assert(m_isInitialized && "Decomposition is not initialized.");
|
|
269
|
-
return m_info;
|
|
300
|
+
/** Performs a symbolic decomposition on the sparsity pattern of \a matrix.
|
|
301
|
+
*
|
|
302
|
+
* This function is particularly useful when solving for several problems having the same structure.
|
|
303
|
+
*
|
|
304
|
+
* \sa factorize()
|
|
305
|
+
*/
|
|
306
|
+
void analyzePattern(const MatrixType& matrix) {
|
|
307
|
+
if (m_cholmodFactor) {
|
|
308
|
+
internal::cm_free_factor<StorageIndex>(m_cholmodFactor, m_cholmod);
|
|
309
|
+
m_cholmodFactor = 0;
|
|
270
310
|
}
|
|
311
|
+
cholmod_sparse A = viewAsCholmod(matrix.template selfadjointView<UpLo>());
|
|
312
|
+
m_cholmodFactor = internal::cm_analyze<StorageIndex>(A, m_cholmod);
|
|
271
313
|
|
|
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|
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|
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|
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|
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|
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|
|
276
|
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|
|
277
|
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return derived();
|
|
278
|
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}
|
|
314
|
+
this->m_isInitialized = true;
|
|
315
|
+
this->m_info = Success;
|
|
316
|
+
m_analysisIsOk = true;
|
|
317
|
+
m_factorizationIsOk = false;
|
|
318
|
+
}
|
|
279
319
|
|
|
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|
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|
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292
|
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|
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|
294
|
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|
|
320
|
+
/** Performs a numeric decomposition of \a matrix
|
|
321
|
+
*
|
|
322
|
+
* The given matrix must have the same sparsity pattern as the matrix on which the symbolic decomposition has been
|
|
323
|
+
* performed.
|
|
324
|
+
*
|
|
325
|
+
* \sa analyzePattern()
|
|
326
|
+
*/
|
|
327
|
+
void factorize(const MatrixType& matrix) {
|
|
328
|
+
eigen_assert(m_analysisIsOk && "You must first call analyzePattern()");
|
|
329
|
+
cholmod_sparse A = viewAsCholmod(matrix.template selfadjointView<UpLo>());
|
|
330
|
+
internal::cm_factorize_p<StorageIndex>(&A, m_shiftOffset, 0, 0, m_cholmodFactor, m_cholmod);
|
|
331
|
+
|
|
332
|
+
// If the factorization failed, either the input matrix was zero (so m_cholmodFactor == nullptr), or minor is the
|
|
333
|
+
// column at which it failed. On success minor == n.
|
|
334
|
+
this->m_info =
|
|
335
|
+
(m_cholmodFactor != nullptr && m_cholmodFactor->minor == m_cholmodFactor->n ? Success : NumericalIssue);
|
|
336
|
+
m_factorizationIsOk = true;
|
|
337
|
+
}
|
|
295
338
|
|
|
296
|
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|
|
297
|
-
|
|
298
|
-
|
|
299
|
-
|
|
339
|
+
/** Returns a reference to the Cholmod's configuration structure to get a full control over the performed operations.
|
|
340
|
+
* See the Cholmod user guide for details. */
|
|
341
|
+
cholmod_common& cholmod() { return m_cholmod; }
|
|
342
|
+
|
|
343
|
+
#ifndef EIGEN_PARSED_BY_DOXYGEN
|
|
344
|
+
/** \internal */
|
|
345
|
+
template <typename Rhs, typename Dest>
|
|
346
|
+
void _solve_impl(const MatrixBase<Rhs>& b, MatrixBase<Dest>& dest) const {
|
|
347
|
+
eigen_assert(m_factorizationIsOk &&
|
|
348
|
+
"The decomposition is not in a valid state for solving, you must first call either compute() or "
|
|
349
|
+
"symbolic()/numeric()");
|
|
350
|
+
const Index size = m_cholmodFactor->n;
|
|
351
|
+
EIGEN_UNUSED_VARIABLE(size);
|
|
352
|
+
eigen_assert(size == b.rows());
|
|
353
|
+
|
|
354
|
+
// Cholmod needs column-major storage without inner-stride, which corresponds to the default behavior of Ref.
|
|
355
|
+
Ref<const Matrix<typename Rhs::Scalar, Dynamic, Dynamic, ColMajor> > b_ref(b.derived());
|
|
356
|
+
|
|
357
|
+
cholmod_dense b_cd = viewAsCholmod(b_ref);
|
|
358
|
+
cholmod_dense* x_cd = internal::cm_solve<StorageIndex>(CHOLMOD_A, *m_cholmodFactor, b_cd, m_cholmod);
|
|
359
|
+
if (!x_cd) {
|
|
360
|
+
this->m_info = NumericalIssue;
|
|
361
|
+
return;
|
|
300
362
|
}
|
|
363
|
+
// TODO optimize this copy by swapping when possible (be careful with alignment, etc.)
|
|
364
|
+
// NOTE Actually, the copy can be avoided by calling cholmod_solve2 instead of cholmod_solve
|
|
365
|
+
dest = Matrix<Scalar, Dest::RowsAtCompileTime, Dest::ColsAtCompileTime>::Map(reinterpret_cast<Scalar*>(x_cd->x),
|
|
366
|
+
b.rows(), b.cols());
|
|
367
|
+
internal::cm_free_dense<StorageIndex>(x_cd, m_cholmod);
|
|
368
|
+
}
|
|
301
369
|
|
|
302
|
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|
|
303
|
-
|
|
304
|
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|
|
305
|
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|
|
306
|
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|
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|
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|
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|
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|
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|
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|
311
|
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312
|
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|
|
313
|
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/** \internal */
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template <typename RhsDerived, typename DestDerived>
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void _solve_impl(const SparseMatrixBase<RhsDerived>& b, SparseMatrixBase<DestDerived>& dest) const {
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eigen_assert(m_factorizationIsOk &&
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"The decomposition is not in a valid state for solving, you must first call either compute() or "
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"symbolic()/numeric()");
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const Index size = m_cholmodFactor->n;
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EIGEN_UNUSED_VARIABLE(size);
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eigen_assert(size == b.rows());
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// note: cs stands for Cholmod Sparse
|
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Ref<SparseMatrix<typename RhsDerived::Scalar, ColMajor, typename RhsDerived::StorageIndex> > b_ref(
|
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b.const_cast_derived());
|
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cholmod_sparse b_cs = viewAsCholmod(b_ref);
|
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cholmod_sparse* x_cs = internal::cm_spsolve<StorageIndex>(CHOLMOD_A, *m_cholmodFactor, b_cs, m_cholmod);
|
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|
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if (!x_cs) {
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this->m_info = NumericalIssue;
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return;
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|
}
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+
// TODO optimize this copy by swapping when possible (be careful with alignment, etc.)
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// NOTE cholmod_spsolve in fact just calls the dense solver for blocks of 4 columns at a time (similar to Eigen's
|
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// sparse solver)
|
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dest.derived() = viewAsEigen<typename DestDerived::Scalar, typename DestDerived::StorageIndex>(*x_cs);
|
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internal::cm_free_sparse<StorageIndex>(x_cs, m_cholmod);
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}
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#endif // EIGEN_PARSED_BY_DOXYGEN
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+
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/** Sets the shift parameter that will be used to adjust the diagonal coefficients during the numerical factorization.
|
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*
|
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* During the numerical factorization, an offset term is added to the diagonal coefficients:\n
|
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* \c d_ii = \a offset + \c d_ii
|
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*
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* The default is \a offset=0.
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*
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* \returns a reference to \c *this.
|
|
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|
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*/
|
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|
+
Derived& setShift(const RealScalar& offset) {
|
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|
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m_shiftOffset[0] = double(offset);
|
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return derived();
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}
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/** \internal */
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template<typename Rhs,typename Dest>
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void _solve_impl(const MatrixBase<Rhs> &b, MatrixBase<Dest> &dest) const
|
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{
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eigen_assert(m_factorizationIsOk && "The decomposition is not in a valid state for solving, you must first call either compute() or symbolic()/numeric()");
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|
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const Index size = m_cholmodFactor->n;
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|
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EIGEN_UNUSED_VARIABLE(size);
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|
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eigen_assert(size==b.rows());
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|
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333
|
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// Cholmod needs column-major storage without inner-stride, which corresponds to the default behavior of Ref.
|
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|
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Ref<const Matrix<typename Rhs::Scalar,Dynamic,Dynamic,ColMajor> > b_ref(b.derived());
|
|
335
|
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|
|
336
|
-
cholmod_dense b_cd = viewAsCholmod(b_ref);
|
|
337
|
-
cholmod_dense* x_cd = internal::cm_solve<StorageIndex>(CHOLMOD_A, *m_cholmodFactor, b_cd, m_cholmod);
|
|
338
|
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if(!x_cd)
|
|
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|
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{
|
|
340
|
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this->m_info = NumericalIssue;
|
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341
|
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return;
|
|
342
|
-
}
|
|
343
|
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// TODO optimize this copy by swapping when possible (be careful with alignment, etc.)
|
|
344
|
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// NOTE Actually, the copy can be avoided by calling cholmod_solve2 instead of cholmod_solve
|
|
345
|
-
dest = Matrix<Scalar,Dest::RowsAtCompileTime,Dest::ColsAtCompileTime>::Map(reinterpret_cast<Scalar*>(x_cd->x),b.rows(),b.cols());
|
|
346
|
-
internal::cm_free_dense<StorageIndex>(x_cd, m_cholmod);
|
|
347
|
-
}
|
|
411
|
+
/** \returns the determinant of the underlying matrix from the current factorization */
|
|
412
|
+
Scalar determinant() const {
|
|
413
|
+
using std::exp;
|
|
414
|
+
return exp(logDeterminant());
|
|
415
|
+
}
|
|
348
416
|
|
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349
|
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350
|
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|
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|
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|
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361
|
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362
|
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|
363
|
-
|
|
364
|
-
|
|
365
|
-
|
|
417
|
+
/** \returns the log determinant of the underlying matrix from the current factorization */
|
|
418
|
+
Scalar logDeterminant() const {
|
|
419
|
+
using numext::real;
|
|
420
|
+
using std::log;
|
|
421
|
+
eigen_assert(m_factorizationIsOk &&
|
|
422
|
+
"The decomposition is not in a valid state for solving, you must first call either compute() or "
|
|
423
|
+
"symbolic()/numeric()");
|
|
424
|
+
|
|
425
|
+
RealScalar logDet = 0;
|
|
426
|
+
Scalar* x = static_cast<Scalar*>(m_cholmodFactor->x);
|
|
427
|
+
if (m_cholmodFactor->is_super) {
|
|
428
|
+
// Supernodal factorization stored as a packed list of dense column-major blocks,
|
|
429
|
+
// as described by the following structure:
|
|
430
|
+
|
|
431
|
+
// super[k] == index of the first column of the j-th super node
|
|
432
|
+
StorageIndex* super = static_cast<StorageIndex*>(m_cholmodFactor->super);
|
|
433
|
+
// pi[k] == offset to the description of row indices
|
|
434
|
+
StorageIndex* pi = static_cast<StorageIndex*>(m_cholmodFactor->pi);
|
|
435
|
+
// px[k] == offset to the respective dense block
|
|
436
|
+
StorageIndex* px = static_cast<StorageIndex*>(m_cholmodFactor->px);
|
|
437
|
+
|
|
438
|
+
Index nb_super_nodes = m_cholmodFactor->nsuper;
|
|
439
|
+
for (Index k = 0; k < nb_super_nodes; ++k) {
|
|
440
|
+
StorageIndex ncols = super[k + 1] - super[k];
|
|
441
|
+
StorageIndex nrows = pi[k + 1] - pi[k];
|
|
442
|
+
|
|
443
|
+
Map<const Array<Scalar, 1, Dynamic>, 0, InnerStride<> > sk(x + px[k], ncols, InnerStride<>(nrows + 1));
|
|
444
|
+
logDet += sk.real().log().sum();
|
|
366
445
|
}
|
|
367
|
-
|
|
368
|
-
//
|
|
369
|
-
|
|
370
|
-
|
|
371
|
-
|
|
372
|
-
#endif // EIGEN_PARSED_BY_DOXYGEN
|
|
373
|
-
|
|
374
|
-
|
|
375
|
-
/** Sets the shift parameter that will be used to adjust the diagonal coefficients during the numerical factorization.
|
|
376
|
-
*
|
|
377
|
-
* During the numerical factorization, an offset term is added to the diagonal coefficients:\n
|
|
378
|
-
* \c d_ii = \a offset + \c d_ii
|
|
379
|
-
*
|
|
380
|
-
* The default is \a offset=0.
|
|
381
|
-
*
|
|
382
|
-
* \returns a reference to \c *this.
|
|
383
|
-
*/
|
|
384
|
-
Derived& setShift(const RealScalar& offset)
|
|
385
|
-
{
|
|
386
|
-
m_shiftOffset[0] = double(offset);
|
|
387
|
-
return derived();
|
|
446
|
+
} else {
|
|
447
|
+
// Simplicial factorization stored as standard CSC matrix.
|
|
448
|
+
StorageIndex* p = static_cast<StorageIndex*>(m_cholmodFactor->p);
|
|
449
|
+
Index size = m_cholmodFactor->n;
|
|
450
|
+
for (Index k = 0; k < size; ++k) logDet += log(real(x[p[k]]));
|
|
388
451
|
}
|
|
452
|
+
if (m_cholmodFactor->is_ll) logDet *= 2.0;
|
|
453
|
+
return logDet;
|
|
454
|
+
}
|
|
389
455
|
|
|
390
|
-
|
|
391
|
-
|
|
392
|
-
{
|
|
393
|
-
using std::exp;
|
|
394
|
-
return exp(logDeterminant());
|
|
395
|
-
}
|
|
456
|
+
template <typename Stream>
|
|
457
|
+
void dumpMemory(Stream& /*s*/) {}
|
|
396
458
|
|
|
397
|
-
|
|
398
|
-
|
|
399
|
-
|
|
400
|
-
|
|
401
|
-
|
|
402
|
-
|
|
403
|
-
|
|
404
|
-
RealScalar logDet = 0;
|
|
405
|
-
Scalar *x = static_cast<Scalar*>(m_cholmodFactor->x);
|
|
406
|
-
if (m_cholmodFactor->is_super)
|
|
407
|
-
{
|
|
408
|
-
// Supernodal factorization stored as a packed list of dense column-major blocs,
|
|
409
|
-
// as described by the following structure:
|
|
410
|
-
|
|
411
|
-
// super[k] == index of the first column of the j-th super node
|
|
412
|
-
StorageIndex *super = static_cast<StorageIndex*>(m_cholmodFactor->super);
|
|
413
|
-
// pi[k] == offset to the description of row indices
|
|
414
|
-
StorageIndex *pi = static_cast<StorageIndex*>(m_cholmodFactor->pi);
|
|
415
|
-
// px[k] == offset to the respective dense block
|
|
416
|
-
StorageIndex *px = static_cast<StorageIndex*>(m_cholmodFactor->px);
|
|
417
|
-
|
|
418
|
-
Index nb_super_nodes = m_cholmodFactor->nsuper;
|
|
419
|
-
for (Index k=0; k < nb_super_nodes; ++k)
|
|
420
|
-
{
|
|
421
|
-
StorageIndex ncols = super[k + 1] - super[k];
|
|
422
|
-
StorageIndex nrows = pi[k + 1] - pi[k];
|
|
423
|
-
|
|
424
|
-
Map<const Array<Scalar,1,Dynamic>, 0, InnerStride<> > sk(x + px[k], ncols, InnerStride<>(nrows+1));
|
|
425
|
-
logDet += sk.real().log().sum();
|
|
426
|
-
}
|
|
427
|
-
}
|
|
428
|
-
else
|
|
429
|
-
{
|
|
430
|
-
// Simplicial factorization stored as standard CSC matrix.
|
|
431
|
-
StorageIndex *p = static_cast<StorageIndex*>(m_cholmodFactor->p);
|
|
432
|
-
Index size = m_cholmodFactor->n;
|
|
433
|
-
for (Index k=0; k<size; ++k)
|
|
434
|
-
logDet += log(real( x[p[k]] ));
|
|
435
|
-
}
|
|
436
|
-
if (m_cholmodFactor->is_ll)
|
|
437
|
-
logDet *= 2.0;
|
|
438
|
-
return logDet;
|
|
439
|
-
};
|
|
440
|
-
|
|
441
|
-
template<typename Stream>
|
|
442
|
-
void dumpMemory(Stream& /*s*/)
|
|
443
|
-
{}
|
|
444
|
-
|
|
445
|
-
protected:
|
|
446
|
-
mutable cholmod_common m_cholmod;
|
|
447
|
-
cholmod_factor* m_cholmodFactor;
|
|
448
|
-
double m_shiftOffset[2];
|
|
449
|
-
mutable ComputationInfo m_info;
|
|
450
|
-
int m_factorizationIsOk;
|
|
451
|
-
int m_analysisIsOk;
|
|
459
|
+
protected:
|
|
460
|
+
mutable cholmod_common m_cholmod;
|
|
461
|
+
cholmod_factor* m_cholmodFactor;
|
|
462
|
+
double m_shiftOffset[2];
|
|
463
|
+
mutable ComputationInfo m_info;
|
|
464
|
+
int m_factorizationIsOk;
|
|
465
|
+
int m_analysisIsOk;
|
|
452
466
|
};
|
|
453
467
|
|
|
454
468
|
/** \ingroup CholmodSupport_Module
|
|
455
|
-
|
|
456
|
-
|
|
457
|
-
|
|
458
|
-
|
|
459
|
-
|
|
460
|
-
|
|
461
|
-
|
|
462
|
-
|
|
463
|
-
|
|
464
|
-
|
|
465
|
-
|
|
466
|
-
|
|
467
|
-
|
|
468
|
-
|
|
469
|
-
|
|
470
|
-
|
|
471
|
-
|
|
472
|
-
|
|
473
|
-
|
|
474
|
-
|
|
475
|
-
|
|
476
|
-
|
|
477
|
-
|
|
478
|
-
{
|
|
479
|
-
|
|
480
|
-
|
|
481
|
-
|
|
482
|
-
|
|
483
|
-
|
|
484
|
-
|
|
485
|
-
|
|
486
|
-
|
|
487
|
-
|
|
488
|
-
|
|
489
|
-
|
|
490
|
-
|
|
491
|
-
|
|
492
|
-
|
|
469
|
+
* \class CholmodSimplicialLLT
|
|
470
|
+
* \brief A simplicial direct Cholesky (LLT) factorization and solver based on Cholmod
|
|
471
|
+
*
|
|
472
|
+
* This class allows to solve for A.X = B sparse linear problems via a simplicial LL^T Cholesky factorization
|
|
473
|
+
* using the Cholmod library.
|
|
474
|
+
* This simplicial variant is equivalent to Eigen's built-in SimplicialLLT class. Therefore, it has little practical
|
|
475
|
+
* interest. The sparse matrix A must be selfadjoint and positive definite. The vectors or matrices X and B can be
|
|
476
|
+
* either dense or sparse.
|
|
477
|
+
*
|
|
478
|
+
* \tparam MatrixType_ the type of the sparse matrix A, it must be a SparseMatrix<>
|
|
479
|
+
* \tparam UpLo_ the triangular part that will be used for the computations. It can be Lower
|
|
480
|
+
* or Upper. Default is Lower.
|
|
481
|
+
*
|
|
482
|
+
* \implsparsesolverconcept
|
|
483
|
+
*
|
|
484
|
+
* This class supports all kind of SparseMatrix<>: row or column major; upper, lower, or both; compressed or non
|
|
485
|
+
* compressed.
|
|
486
|
+
*
|
|
487
|
+
* \warning Only double precision real and complex scalar types are supported by Cholmod.
|
|
488
|
+
*
|
|
489
|
+
* \sa \ref TutorialSparseSolverConcept, class CholmodSupernodalLLT, class SimplicialLLT
|
|
490
|
+
*/
|
|
491
|
+
template <typename MatrixType_, int UpLo_ = Lower>
|
|
492
|
+
class CholmodSimplicialLLT : public CholmodBase<MatrixType_, UpLo_, CholmodSimplicialLLT<MatrixType_, UpLo_> > {
|
|
493
|
+
typedef CholmodBase<MatrixType_, UpLo_, CholmodSimplicialLLT> Base;
|
|
494
|
+
using Base::m_cholmod;
|
|
495
|
+
|
|
496
|
+
public:
|
|
497
|
+
typedef MatrixType_ MatrixType;
|
|
498
|
+
typedef typename MatrixType::Scalar Scalar;
|
|
499
|
+
typedef typename MatrixType::RealScalar RealScalar;
|
|
500
|
+
typedef typename MatrixType::StorageIndex StorageIndex;
|
|
501
|
+
typedef TriangularView<const MatrixType, Eigen::Lower> MatrixL;
|
|
502
|
+
typedef TriangularView<const typename MatrixType::AdjointReturnType, Eigen::Upper> MatrixU;
|
|
503
|
+
|
|
504
|
+
CholmodSimplicialLLT() : Base() { init(); }
|
|
505
|
+
|
|
506
|
+
CholmodSimplicialLLT(const MatrixType& matrix) : Base() {
|
|
507
|
+
init();
|
|
508
|
+
this->compute(matrix);
|
|
509
|
+
}
|
|
493
510
|
|
|
494
|
-
|
|
495
|
-
|
|
496
|
-
|
|
497
|
-
|
|
498
|
-
m_cholmod.final_asis = 0;
|
|
499
|
-
m_cholmod.supernodal = CHOLMOD_SIMPLICIAL;
|
|
500
|
-
m_cholmod.final_ll = 1;
|
|
501
|
-
}
|
|
502
|
-
};
|
|
511
|
+
~CholmodSimplicialLLT() {}
|
|
512
|
+
|
|
513
|
+
/** \returns an expression of the factor L */
|
|
514
|
+
inline MatrixL matrixL() const { return viewAsEigen<Scalar, StorageIndex>(*Base::m_cholmodFactor); }
|
|
503
515
|
|
|
516
|
+
/** \returns an expression of the factor U (= L^*) */
|
|
517
|
+
inline MatrixU matrixU() const { return matrixL().adjoint(); }
|
|
518
|
+
|
|
519
|
+
protected:
|
|
520
|
+
void init() {
|
|
521
|
+
m_cholmod.final_asis = 0;
|
|
522
|
+
m_cholmod.supernodal = CHOLMOD_SIMPLICIAL;
|
|
523
|
+
m_cholmod.final_ll = 1;
|
|
524
|
+
}
|
|
525
|
+
};
|
|
504
526
|
|
|
505
527
|
/** \ingroup CholmodSupport_Module
|
|
506
|
-
|
|
507
|
-
|
|
508
|
-
|
|
509
|
-
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510
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-
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511
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512
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513
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514
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515
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516
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517
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518
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519
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520
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521
|
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522
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523
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524
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525
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526
|
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527
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528
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529
|
-
{
|
|
530
|
-
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531
|
-
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532
|
-
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|
533
|
-
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534
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535
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536
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-
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537
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538
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539
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540
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541
|
-
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542
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-
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543
|
-
|
|
528
|
+
* \class CholmodSimplicialLDLT
|
|
529
|
+
* \brief A simplicial direct Cholesky (LDLT) factorization and solver based on Cholmod
|
|
530
|
+
*
|
|
531
|
+
* This class allows to solve for A.X = B sparse linear problems via a simplicial LDL^T Cholesky factorization
|
|
532
|
+
* using the Cholmod library.
|
|
533
|
+
* This simplicial variant is equivalent to Eigen's built-in SimplicialLDLT class. Therefore, it has little practical
|
|
534
|
+
* interest. The sparse matrix A must be selfadjoint and positive definite. The vectors or matrices X and B can be
|
|
535
|
+
* either dense or sparse.
|
|
536
|
+
*
|
|
537
|
+
* \tparam MatrixType_ the type of the sparse matrix A, it must be a SparseMatrix<>
|
|
538
|
+
* \tparam UpLo_ the triangular part that will be used for the computations. It can be Lower
|
|
539
|
+
* or Upper. Default is Lower.
|
|
540
|
+
*
|
|
541
|
+
* \implsparsesolverconcept
|
|
542
|
+
*
|
|
543
|
+
* This class supports all kind of SparseMatrix<>: row or column major; upper, lower, or both; compressed or non
|
|
544
|
+
* compressed.
|
|
545
|
+
*
|
|
546
|
+
* \warning Only double precision real and complex scalar types are supported by Cholmod.
|
|
547
|
+
*
|
|
548
|
+
* \sa \ref TutorialSparseSolverConcept, class CholmodSupernodalLLT, class SimplicialLDLT
|
|
549
|
+
*/
|
|
550
|
+
template <typename MatrixType_, int UpLo_ = Lower>
|
|
551
|
+
class CholmodSimplicialLDLT : public CholmodBase<MatrixType_, UpLo_, CholmodSimplicialLDLT<MatrixType_, UpLo_> > {
|
|
552
|
+
typedef CholmodBase<MatrixType_, UpLo_, CholmodSimplicialLDLT> Base;
|
|
553
|
+
using Base::m_cholmod;
|
|
554
|
+
|
|
555
|
+
public:
|
|
556
|
+
typedef MatrixType_ MatrixType;
|
|
557
|
+
typedef typename MatrixType::Scalar Scalar;
|
|
558
|
+
typedef typename MatrixType::RealScalar RealScalar;
|
|
559
|
+
typedef typename MatrixType::StorageIndex StorageIndex;
|
|
560
|
+
typedef Matrix<Scalar, Dynamic, 1> VectorType;
|
|
561
|
+
typedef TriangularView<const MatrixType, Eigen::UnitLower> MatrixL;
|
|
562
|
+
typedef TriangularView<const typename MatrixType::AdjointReturnType, Eigen::UnitUpper> MatrixU;
|
|
563
|
+
|
|
564
|
+
CholmodSimplicialLDLT() : Base() { init(); }
|
|
565
|
+
|
|
566
|
+
CholmodSimplicialLDLT(const MatrixType& matrix) : Base() {
|
|
567
|
+
init();
|
|
568
|
+
this->compute(matrix);
|
|
569
|
+
}
|
|
570
|
+
|
|
571
|
+
~CholmodSimplicialLDLT() {}
|
|
572
|
+
|
|
573
|
+
/** \returns a vector expression of the diagonal D */
|
|
574
|
+
inline VectorType vectorD() const {
|
|
575
|
+
auto cholmodL = viewAsEigen<Scalar, StorageIndex>(*Base::m_cholmodFactor);
|
|
544
576
|
|
|
545
|
-
|
|
546
|
-
|
|
547
|
-
|
|
548
|
-
|
|
549
|
-
|
|
550
|
-
m_cholmod.supernodal = CHOLMOD_SIMPLICIAL;
|
|
577
|
+
VectorType D{cholmodL.rows()};
|
|
578
|
+
|
|
579
|
+
for (Index k = 0; k < cholmodL.outerSize(); ++k) {
|
|
580
|
+
typename decltype(cholmodL)::InnerIterator it{cholmodL, k};
|
|
581
|
+
D(k) = it.value();
|
|
551
582
|
}
|
|
583
|
+
|
|
584
|
+
return D;
|
|
585
|
+
}
|
|
586
|
+
|
|
587
|
+
/** \returns an expression of the factor L */
|
|
588
|
+
inline MatrixL matrixL() const { return viewAsEigen<Scalar, StorageIndex>(*Base::m_cholmodFactor); }
|
|
589
|
+
|
|
590
|
+
/** \returns an expression of the factor U (= L^*) */
|
|
591
|
+
inline MatrixU matrixU() const { return matrixL().adjoint(); }
|
|
592
|
+
|
|
593
|
+
protected:
|
|
594
|
+
void init() {
|
|
595
|
+
m_cholmod.final_asis = 1;
|
|
596
|
+
m_cholmod.supernodal = CHOLMOD_SIMPLICIAL;
|
|
597
|
+
}
|
|
552
598
|
};
|
|
553
599
|
|
|
554
600
|
/** \ingroup CholmodSupport_Module
|
|
555
|
-
|
|
556
|
-
|
|
557
|
-
|
|
558
|
-
|
|
559
|
-
|
|
560
|
-
|
|
561
|
-
|
|
562
|
-
|
|
563
|
-
|
|
564
|
-
|
|
565
|
-
|
|
566
|
-
|
|
567
|
-
|
|
568
|
-
|
|
569
|
-
|
|
570
|
-
|
|
571
|
-
|
|
572
|
-
|
|
573
|
-
|
|
574
|
-
|
|
575
|
-
|
|
576
|
-
|
|
577
|
-
|
|
578
|
-
{
|
|
579
|
-
|
|
580
|
-
|
|
581
|
-
|
|
582
|
-
|
|
583
|
-
|
|
584
|
-
|
|
585
|
-
|
|
586
|
-
|
|
587
|
-
|
|
588
|
-
|
|
589
|
-
|
|
590
|
-
|
|
591
|
-
|
|
592
|
-
|
|
601
|
+
* \class CholmodSupernodalLLT
|
|
602
|
+
* \brief A supernodal Cholesky (LLT) factorization and solver based on Cholmod
|
|
603
|
+
*
|
|
604
|
+
* This class allows to solve for A.X = B sparse linear problems via a supernodal LL^T Cholesky factorization
|
|
605
|
+
* using the Cholmod library.
|
|
606
|
+
* This supernodal variant performs best on dense enough problems, e.g., 3D FEM, or very high order 2D FEM.
|
|
607
|
+
* The sparse matrix A must be selfadjoint and positive definite. The vectors or matrices
|
|
608
|
+
* X and B can be either dense or sparse.
|
|
609
|
+
*
|
|
610
|
+
* \tparam MatrixType_ the type of the sparse matrix A, it must be a SparseMatrix<>
|
|
611
|
+
* \tparam UpLo_ the triangular part that will be used for the computations. It can be Lower
|
|
612
|
+
* or Upper. Default is Lower.
|
|
613
|
+
*
|
|
614
|
+
* \implsparsesolverconcept
|
|
615
|
+
*
|
|
616
|
+
* This class supports all kind of SparseMatrix<>: row or column major; upper, lower, or both; compressed or non
|
|
617
|
+
* compressed.
|
|
618
|
+
*
|
|
619
|
+
* \warning Only double precision real and complex scalar types are supported by Cholmod.
|
|
620
|
+
*
|
|
621
|
+
* \sa \ref TutorialSparseSolverConcept
|
|
622
|
+
*/
|
|
623
|
+
template <typename MatrixType_, int UpLo_ = Lower>
|
|
624
|
+
class CholmodSupernodalLLT : public CholmodBase<MatrixType_, UpLo_, CholmodSupernodalLLT<MatrixType_, UpLo_> > {
|
|
625
|
+
typedef CholmodBase<MatrixType_, UpLo_, CholmodSupernodalLLT> Base;
|
|
626
|
+
using Base::m_cholmod;
|
|
627
|
+
|
|
628
|
+
public:
|
|
629
|
+
typedef MatrixType_ MatrixType;
|
|
630
|
+
typedef typename MatrixType::Scalar Scalar;
|
|
631
|
+
typedef typename MatrixType::RealScalar RealScalar;
|
|
632
|
+
typedef typename MatrixType::StorageIndex StorageIndex;
|
|
633
|
+
|
|
634
|
+
CholmodSupernodalLLT() : Base() { init(); }
|
|
635
|
+
|
|
636
|
+
CholmodSupernodalLLT(const MatrixType& matrix) : Base() {
|
|
637
|
+
init();
|
|
638
|
+
this->compute(matrix);
|
|
639
|
+
}
|
|
593
640
|
|
|
594
|
-
|
|
595
|
-
|
|
596
|
-
|
|
597
|
-
|
|
598
|
-
|
|
599
|
-
|
|
600
|
-
|
|
641
|
+
~CholmodSupernodalLLT() {}
|
|
642
|
+
|
|
643
|
+
/** \returns an expression of the factor L */
|
|
644
|
+
inline MatrixType matrixL() const {
|
|
645
|
+
// Convert Cholmod factor's supernodal storage format to Eigen's CSC storage format
|
|
646
|
+
cholmod_sparse* cholmodL = internal::cm_factor_to_sparse(*Base::m_cholmodFactor, m_cholmod);
|
|
647
|
+
MatrixType L = viewAsEigen<Scalar, StorageIndex>(*cholmodL);
|
|
648
|
+
internal::cm_free_sparse<StorageIndex>(cholmodL, m_cholmod);
|
|
649
|
+
|
|
650
|
+
return L;
|
|
651
|
+
}
|
|
652
|
+
|
|
653
|
+
/** \returns an expression of the factor U (= L^*) */
|
|
654
|
+
inline MatrixType matrixU() const { return matrixL().adjoint(); }
|
|
655
|
+
|
|
656
|
+
protected:
|
|
657
|
+
void init() {
|
|
658
|
+
m_cholmod.final_asis = 1;
|
|
659
|
+
m_cholmod.supernodal = CHOLMOD_SUPERNODAL;
|
|
660
|
+
}
|
|
601
661
|
};
|
|
602
662
|
|
|
603
663
|
/** \ingroup CholmodSupport_Module
|
|
604
|
-
|
|
605
|
-
|
|
606
|
-
|
|
607
|
-
|
|
608
|
-
|
|
609
|
-
|
|
610
|
-
|
|
611
|
-
|
|
612
|
-
|
|
613
|
-
|
|
614
|
-
|
|
615
|
-
|
|
616
|
-
|
|
617
|
-
|
|
618
|
-
|
|
619
|
-
|
|
620
|
-
|
|
621
|
-
|
|
622
|
-
|
|
623
|
-
|
|
624
|
-
|
|
625
|
-
|
|
626
|
-
|
|
627
|
-
|
|
628
|
-
|
|
629
|
-
{
|
|
630
|
-
|
|
631
|
-
|
|
632
|
-
|
|
633
|
-
|
|
634
|
-
|
|
635
|
-
|
|
636
|
-
|
|
637
|
-
|
|
638
|
-
|
|
639
|
-
|
|
640
|
-
|
|
641
|
-
|
|
642
|
-
this->compute(matrix);
|
|
643
|
-
}
|
|
664
|
+
* \class CholmodDecomposition
|
|
665
|
+
* \brief A general Cholesky factorization and solver based on Cholmod
|
|
666
|
+
*
|
|
667
|
+
* This class allows to solve for A.X = B sparse linear problems via a LL^T or LDL^T Cholesky factorization
|
|
668
|
+
* using the Cholmod library. The sparse matrix A must be selfadjoint and positive definite. The vectors or matrices
|
|
669
|
+
* X and B can be either dense or sparse.
|
|
670
|
+
*
|
|
671
|
+
* This variant permits to change the underlying Cholesky method at runtime.
|
|
672
|
+
* On the other hand, it does not provide access to the result of the factorization.
|
|
673
|
+
* The default is to let Cholmod automatically choose between a simplicial and supernodal factorization.
|
|
674
|
+
*
|
|
675
|
+
* \tparam MatrixType_ the type of the sparse matrix A, it must be a SparseMatrix<>
|
|
676
|
+
* \tparam UpLo_ the triangular part that will be used for the computations. It can be Lower
|
|
677
|
+
* or Upper. Default is Lower.
|
|
678
|
+
*
|
|
679
|
+
* \implsparsesolverconcept
|
|
680
|
+
*
|
|
681
|
+
* This class supports all kind of SparseMatrix<>: row or column major; upper, lower, or both; compressed or non
|
|
682
|
+
* compressed.
|
|
683
|
+
*
|
|
684
|
+
* \warning Only double precision real and complex scalar types are supported by Cholmod.
|
|
685
|
+
*
|
|
686
|
+
* \sa \ref TutorialSparseSolverConcept
|
|
687
|
+
*/
|
|
688
|
+
template <typename MatrixType_, int UpLo_ = Lower>
|
|
689
|
+
class CholmodDecomposition : public CholmodBase<MatrixType_, UpLo_, CholmodDecomposition<MatrixType_, UpLo_> > {
|
|
690
|
+
typedef CholmodBase<MatrixType_, UpLo_, CholmodDecomposition> Base;
|
|
691
|
+
using Base::m_cholmod;
|
|
692
|
+
|
|
693
|
+
public:
|
|
694
|
+
typedef MatrixType_ MatrixType;
|
|
695
|
+
|
|
696
|
+
CholmodDecomposition() : Base() { init(); }
|
|
697
|
+
|
|
698
|
+
CholmodDecomposition(const MatrixType& matrix) : Base() {
|
|
699
|
+
init();
|
|
700
|
+
this->compute(matrix);
|
|
701
|
+
}
|
|
644
702
|
|
|
645
|
-
|
|
646
|
-
|
|
647
|
-
|
|
648
|
-
{
|
|
649
|
-
|
|
650
|
-
|
|
651
|
-
|
|
652
|
-
|
|
653
|
-
|
|
654
|
-
|
|
655
|
-
|
|
656
|
-
|
|
657
|
-
|
|
658
|
-
|
|
659
|
-
|
|
660
|
-
|
|
661
|
-
|
|
662
|
-
|
|
663
|
-
|
|
664
|
-
|
|
665
|
-
|
|
666
|
-
|
|
667
|
-
|
|
668
|
-
default:
|
|
669
|
-
break;
|
|
670
|
-
}
|
|
671
|
-
}
|
|
672
|
-
protected:
|
|
673
|
-
void init()
|
|
674
|
-
{
|
|
675
|
-
m_cholmod.final_asis = 1;
|
|
676
|
-
m_cholmod.supernodal = CHOLMOD_AUTO;
|
|
703
|
+
~CholmodDecomposition() {}
|
|
704
|
+
|
|
705
|
+
void setMode(CholmodMode mode) {
|
|
706
|
+
switch (mode) {
|
|
707
|
+
case CholmodAuto:
|
|
708
|
+
m_cholmod.final_asis = 1;
|
|
709
|
+
m_cholmod.supernodal = CHOLMOD_AUTO;
|
|
710
|
+
break;
|
|
711
|
+
case CholmodSimplicialLLt:
|
|
712
|
+
m_cholmod.final_asis = 0;
|
|
713
|
+
m_cholmod.supernodal = CHOLMOD_SIMPLICIAL;
|
|
714
|
+
m_cholmod.final_ll = 1;
|
|
715
|
+
break;
|
|
716
|
+
case CholmodSupernodalLLt:
|
|
717
|
+
m_cholmod.final_asis = 1;
|
|
718
|
+
m_cholmod.supernodal = CHOLMOD_SUPERNODAL;
|
|
719
|
+
break;
|
|
720
|
+
case CholmodLDLt:
|
|
721
|
+
m_cholmod.final_asis = 1;
|
|
722
|
+
m_cholmod.supernodal = CHOLMOD_SIMPLICIAL;
|
|
723
|
+
break;
|
|
724
|
+
default:
|
|
725
|
+
break;
|
|
677
726
|
}
|
|
727
|
+
}
|
|
728
|
+
|
|
729
|
+
protected:
|
|
730
|
+
void init() {
|
|
731
|
+
m_cholmod.final_asis = 1;
|
|
732
|
+
m_cholmod.supernodal = CHOLMOD_AUTO;
|
|
733
|
+
}
|
|
678
734
|
};
|
|
679
735
|
|
|
680
|
-
}
|
|
736
|
+
} // end namespace Eigen
|
|
681
737
|
|
|
682
|
-
#endif
|
|
738
|
+
#endif // EIGEN_CHOLMODSUPPORT_H
|