@sjcrh/proteinpaint-client 2.207.1 → 2.209.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (940) hide show
  1. package/dist/2dmaf-VTMPVZGT.js +1367 -0
  2. package/dist/AggMatrixInput-CH3RQ2QC.js +406 -0
  3. package/dist/AggMatrixInput-CH3RQ2QC.js.map +7 -0
  4. package/dist/AggregateMatrix-DPCHUOMF.js +41 -0
  5. package/dist/AppHeader-RA7T467G.js +830 -0
  6. package/dist/BoxPlot-7Q7SMT26.js +1211 -0
  7. package/dist/CorrelationVolcano-YV4UHOAX.js +617 -0
  8. package/dist/CorrelationVolcano-YV4UHOAX.js.map +7 -0
  9. package/dist/Cuminc-ZN53C3MD.js +1219 -0
  10. package/dist/DE-BEWW5AIG.js +89 -0
  11. package/dist/DEinput-SJITUJF2.js +499 -0
  12. package/dist/DM-2LBNE4WE.js +90 -0
  13. package/dist/DifferentialAnalysis-WE4LBHEF.js +239 -0
  14. package/dist/DifferentialAnalysis-WE4LBHEF.js.map +7 -0
  15. package/dist/Disco-PTZQF7IM.js +3389 -0
  16. package/dist/Disco.UI-NBR67N5M.js +243 -0
  17. package/dist/DmrPlot-QROLI66S.js +362 -0
  18. package/dist/DmrPlot-QROLI66S.js.map +7 -0
  19. package/dist/GB-FEBSFX5U.js +1428 -0
  20. package/dist/GB-FEBSFX5U.js.map +7 -0
  21. package/dist/GSEA-KOXOVC5V.js +875 -0
  22. package/dist/GSEA-KOXOVC5V.js.map +7 -0
  23. package/dist/GeneExpInput-DYBK54HC.js +42 -0
  24. package/dist/Geomap-QRD2WZVL.js +84 -0
  25. package/dist/HicApp-VKET4QHD.js +2245 -0
  26. package/dist/IDCViewer-RLLTXGD7.js +10812 -0
  27. package/dist/NumBinaryEditor-GYHOYPQL.js +279 -0
  28. package/dist/NumBinaryEditor.unit.spec-E2HKBWOO.js +312 -0
  29. package/dist/NumContEditor-3V76ZSEY.js +105 -0
  30. package/dist/NumContEditor.unit.spec-RTT5Q5E5.js +164 -0
  31. package/dist/NumCustomBinEditor-O5DMPY7H.js +33 -0
  32. package/dist/NumCustomBinEditor.unit.spec-5LZBP2JL.js +397 -0
  33. package/dist/NumDiscreteEditor-DFOJ7AIH.js +170 -0
  34. package/dist/NumDiscreteEditor.unit.spec-PPJGEBFX.js +233 -0
  35. package/dist/NumRegularBinEditor-O6RDO32C.js +33 -0
  36. package/dist/NumRegularBinEditor.unit.spec-GOB3BF25.js +278 -0
  37. package/dist/NumSplineEditor-PUXJF2RW.js +210 -0
  38. package/dist/NumSplineEditor.unit.spec-4VOAAMOU.js +224 -0
  39. package/dist/NumericDensity-E6MH2THZ.js +33 -0
  40. package/dist/NumericDensity.unit.spec-IRPFBQUS.js +418 -0
  41. package/dist/NumericHandler-42RR54X3.js +34 -0
  42. package/dist/NumericHandler.unit.spec-YYOO7XVT.js +214 -0
  43. package/dist/ProteomeInput-4N2G6IFX.js +388 -0
  44. package/dist/Regression-LIWUWAGQ.js +1416 -0
  45. package/dist/Regression-LIWUWAGQ.js.map +7 -0
  46. package/dist/RunChart2-VAX5JGZY.js +749 -0
  47. package/dist/SC-UHBZ3HRO.js +1183 -0
  48. package/dist/SC-UHBZ3HRO.js.map +7 -0
  49. package/dist/Violin-V23VZR6B.js +1081 -0
  50. package/dist/Violin-V23VZR6B.js.map +7 -0
  51. package/dist/Volcano-64S4AW66.js +2443 -0
  52. package/dist/Volcano-64S4AW66.js.map +7 -0
  53. package/dist/Wsi-FOJCKDCP.js +629 -0
  54. package/dist/Wsi-FOJCKDCP.js.map +7 -0
  55. package/dist/adSandbox-CLMUYNC3.js +33 -0
  56. package/dist/animatedBubbleChart-GMLNYTQC.js +547 -0
  57. package/dist/app-2SFDRDN2.js +32 -0
  58. package/dist/app-QOZ36UR4.js +42 -0
  59. package/dist/app.js +14 -14
  60. package/dist/bam-LLAK7FVG.js +876 -0
  61. package/dist/barchart-SEC6VKQ2.js +42 -0
  62. package/dist/barchart2-D4FXZCTU.js +309 -0
  63. package/dist/block-XGK6TEGH.js +6250 -0
  64. package/dist/block-XGK6TEGH.js.map +7 -0
  65. package/dist/block.init-UMRCAKCF.js +33 -0
  66. package/dist/block.mds.expressionrank-LFPJ52SX.js +354 -0
  67. package/dist/block.mds.geneboxplot-2QIEN6AH.js +823 -0
  68. package/dist/block.mds.junction-Z4HUFSG2.js +1539 -0
  69. package/dist/block.mds.svcnv-3GXGY6ET.js +6796 -0
  70. package/dist/block.svg-7RCJLMAP.js +159 -0
  71. package/dist/block.tk.aicheck-5N6EGZ6F.js +278 -0
  72. package/dist/block.tk.ase-V3AJRYT6.js +360 -0
  73. package/dist/block.tk.bam-W6QOVVEU.js +1901 -0
  74. package/dist/block.tk.bedgraphdot-FKTPJZTH.js +379 -0
  75. package/dist/block.tk.bigwig.ui-Y3M2TDM2.js +206 -0
  76. package/dist/block.tk.hicstraw-3SWYTMFQ.js +818 -0
  77. package/dist/block.tk.junction-OXB22PDS.js +2358 -0
  78. package/dist/block.tk.junction.textmatrixui-PWBLRGCO.js +194 -0
  79. package/dist/block.tk.ld-NTRJL5GA.js +94 -0
  80. package/dist/block.tk.menu-JIHSGGIO.js +1024 -0
  81. package/dist/block.tk.pgv-4Q6CY6QN.js +938 -0
  82. package/dist/brainImaging-MBI4XTTU.js +555 -0
  83. package/dist/brainRegions-YVTAESRP.js +217 -0
  84. package/dist/bubbleHeatmap-ZKTA3AIG.js +378 -0
  85. package/dist/cellTypeBubbleHeatmap-GJZNXDG4.js +278 -0
  86. package/dist/chunk-2PDBU42F.js +4375 -0
  87. package/dist/chunk-2PDBU42F.js.map +7 -0
  88. package/dist/chunk-2RMSV4BS.js +6360 -0
  89. package/dist/chunk-33BE7AYS.js +299 -0
  90. package/dist/chunk-3FEP6B5T.js +119 -0
  91. package/dist/chunk-3XBG5HIV.js +424 -0
  92. package/dist/chunk-3XBG5HIV.js.map +7 -0
  93. package/dist/chunk-4G73CMUL.js +38 -0
  94. package/dist/chunk-5FRETII3.js +281 -0
  95. package/dist/chunk-5LYVIIYR.js +170 -0
  96. package/dist/chunk-6FG6JFZP.js +339 -0
  97. package/dist/chunk-6G45AUSV.js +237 -0
  98. package/dist/chunk-6G45AUSV.js.map +7 -0
  99. package/dist/chunk-6LDKSKYQ.js +70 -0
  100. package/dist/chunk-7FFTAYT4.js +272 -0
  101. package/dist/chunk-7GDRMBNO.js +339 -0
  102. package/dist/chunk-A2UUXYH6.js +1986 -0
  103. package/dist/chunk-AFQKYV4D.js +2853 -0
  104. package/dist/chunk-ANACCKCQ.js +276 -0
  105. package/dist/chunk-AR3HXZIW.js +562 -0
  106. package/dist/chunk-AVCEHJG7.js +446 -0
  107. package/dist/chunk-AVCIZWH5.js +692 -0
  108. package/dist/chunk-AVCIZWH5.js.map +7 -0
  109. package/dist/chunk-B6UXFX73.js +178 -0
  110. package/dist/chunk-B6UXFX73.js.map +7 -0
  111. package/dist/chunk-BCCFJYPE.js +54 -0
  112. package/dist/chunk-BCCFJYPE.js.map +7 -0
  113. package/dist/chunk-BG3SGGVB.js +134 -0
  114. package/dist/chunk-C3HEDQPT.js +24921 -0
  115. package/dist/chunk-C3HEDQPT.js.map +7 -0
  116. package/dist/chunk-CFZ2ZW3E.js +382 -0
  117. package/dist/chunk-CKOU3P27.js +26 -0
  118. package/dist/chunk-CN6KJORZ.js +397 -0
  119. package/dist/chunk-CYWEYHJQ.js +203 -0
  120. package/dist/chunk-D5ETVOOE.js +158 -0
  121. package/dist/chunk-DANF4CC5.js +102 -0
  122. package/dist/chunk-DNCFJTPI.js +1339 -0
  123. package/dist/chunk-FNW6BKOA.js +480 -0
  124. package/dist/chunk-FR5USNAT.js +54 -0
  125. package/dist/chunk-FSLOUTTK.js +37 -0
  126. package/dist/chunk-FSLOUTTK.js.map +7 -0
  127. package/dist/chunk-GYE6FU7P.js +626 -0
  128. package/dist/chunk-IEIGHCZS.js +1278 -0
  129. package/dist/chunk-J5GQGWYX.js +1731 -0
  130. package/dist/chunk-J5GQGWYX.js.map +7 -0
  131. package/dist/chunk-JMDUO47F.js +5071 -0
  132. package/dist/chunk-JTANDSTD.js +54 -0
  133. package/dist/chunk-JTQPPUDG.js +379 -0
  134. package/dist/chunk-K32DV4QI.js +302 -0
  135. package/dist/chunk-K77W4SSI.js +98 -0
  136. package/dist/chunk-KEHVNCFK.js +102 -0
  137. package/dist/chunk-MMKSXXU2.js +55 -0
  138. package/dist/chunk-NDOKW2HJ.js +31 -0
  139. package/dist/chunk-NGMM2MNC.js +518 -0
  140. package/dist/chunk-OASGOTRM.js +80 -0
  141. package/dist/chunk-OASGOTRM.js.map +7 -0
  142. package/dist/chunk-OBDIJ4QS.js +2146 -0
  143. package/dist/chunk-OBDIJ4QS.js.map +7 -0
  144. package/dist/chunk-OEBGQKQR.js +2676 -0
  145. package/dist/chunk-OI5KBFBE.js +468 -0
  146. package/dist/chunk-OWEBE64A.js +243 -0
  147. package/dist/chunk-P7X4LDW4.js +783 -0
  148. package/dist/chunk-Q4HTEL2O.js +56 -0
  149. package/dist/chunk-Q4HTEL2O.js.map +7 -0
  150. package/dist/chunk-QD75Q5LM.js +59 -0
  151. package/dist/chunk-QGH5BM2D.js +141 -0
  152. package/dist/chunk-QSOFGLWZ.js +240 -0
  153. package/dist/chunk-QXDGIQYA.js +217 -0
  154. package/dist/chunk-R2QE6ROO.js +176 -0
  155. package/dist/chunk-RMHUDMZ7.js +103 -0
  156. package/dist/chunk-SB36AUG7.js +1614 -0
  157. package/dist/chunk-SB36AUG7.js.map +7 -0
  158. package/dist/chunk-SXB4IZQ7.js +123 -0
  159. package/dist/chunk-T6Q76PDN.js +182 -0
  160. package/dist/chunk-T6Q76PDN.js.map +7 -0
  161. package/dist/chunk-TYR355RM.js +263 -0
  162. package/dist/chunk-ULZPHJYD.js +2784 -0
  163. package/dist/chunk-V3SOBDIT.js +255 -0
  164. package/dist/chunk-V3SOBDIT.js.map +7 -0
  165. package/dist/chunk-VFUSBU43.js +14 -0
  166. package/dist/chunk-VOF6NWTS.js +274 -0
  167. package/dist/chunk-WGDJX7WZ.js +2327 -0
  168. package/dist/chunk-WIQVSCD5.js +294 -0
  169. package/dist/chunk-WXXRVJSP.js +56 -0
  170. package/dist/chunk-WXXRVJSP.js.map +7 -0
  171. package/dist/chunk-X4MV2M5F.js +129 -0
  172. package/dist/chunk-XVVVNCXS.js +217 -0
  173. package/dist/chunk-XVVVNCXS.js.map +7 -0
  174. package/dist/chunk-YHP7MYB7.js +49 -0
  175. package/dist/chunk-YHWQWVWX.js +550 -0
  176. package/dist/chunk-YKZOQTT4.js +1233 -0
  177. package/dist/chunk-Z5HU276I.js +34 -0
  178. package/dist/chunk-Z6MCBFDM.js +194 -0
  179. package/dist/cohort-GVAJTICQ.js +70 -0
  180. package/dist/condition-EGPNMM47.js +327 -0
  181. package/dist/controls-HBROSXHF.js +34 -0
  182. package/dist/controls.config-FWKV66TU.js +34 -0
  183. package/dist/correlation-CEHE66EC.js +95 -0
  184. package/dist/customdata.inputui-LFT3N5FD.js +284 -0
  185. package/dist/dataDownload-ZPAIAAE4.js +329 -0
  186. package/dist/databrowser.ui-W5JGFBE6.js +425 -0
  187. package/dist/dictionary-RBE2CIZI.js +113 -0
  188. package/dist/dnaMethylation-CX22TSRO.js +33 -0
  189. package/dist/dnaMethylation.integration.spec-KEE6ZZRT.js +198 -0
  190. package/dist/dofetch-6NAGX5EG.js +48 -0
  191. package/dist/e2pca-XDGPTEXL.js +344 -0
  192. package/dist/ep-IUIDMIGW.js +1249 -0
  193. package/dist/expclust.gdc.spec-BMN2PTJX.js +302 -0
  194. package/dist/facet-DTJKZOBA.js +519 -0
  195. package/dist/gb-MV7MUJWO.js +81 -0
  196. package/dist/geneExpClustering-NFH5FS3S.js +244 -0
  197. package/dist/geneExpression-XVOLNYVN.js +310 -0
  198. package/dist/geneExpression-ZP2VWHED.js +33 -0
  199. package/dist/geneExpression.unit.spec-2NSK4ARK.js +128 -0
  200. package/dist/geneExpression.unit.spec-2NSK4ARK.js.map +7 -0
  201. package/dist/geneORA-HQ7FLMEJ.js +273 -0
  202. package/dist/geneRanking-MIABUKTN.js +548 -0
  203. package/dist/geneVariant-H52UUK6Z.js +289 -0
  204. package/dist/geneVariant-H52UUK6Z.js.map +7 -0
  205. package/dist/geneVariant-HDFWLALZ.js +36 -0
  206. package/dist/geneVariant.integration.spec-O36JK4B7.js +503 -0
  207. package/dist/geneVariant.integration.spec-O36JK4B7.js.map +7 -0
  208. package/dist/genefusion.ui-HSDZQHJA.js +303 -0
  209. package/dist/geneset-WKV3X2EJ.js +203 -0
  210. package/dist/genomeBrowser.spec-UTAHAU76.js +276 -0
  211. package/dist/grin2-M2JDZVYU.js +70 -0
  212. package/dist/grin2-N2QM3XTG.js +949 -0
  213. package/dist/grin2-N2QM3XTG.js.map +7 -0
  214. package/dist/hierCluster-LZI6OTRS.js +59 -0
  215. package/dist/hierCluster-VVXPOTQU.js +55 -0
  216. package/dist/hierCluster.config-NCYH3Y7Z.js +36 -0
  217. package/dist/hierCluster.integration.spec-ZDOOCTV3.js +483 -0
  218. package/dist/hierCluster.interactivity-4HP3JCON.js +49 -0
  219. package/dist/hierCluster.renderers-3F5GMEXA.js +19 -0
  220. package/dist/imagePlot-OA4WTMLU.js +156 -0
  221. package/dist/importPlot-OSTC2GPO.js +8 -0
  222. package/dist/isoformExpression-LZ5RTUS5.js +35 -0
  223. package/dist/isoformExpression.unit.spec-L6YDBKYM.js +237 -0
  224. package/dist/junction-UR6COY3A.js +36 -0
  225. package/dist/junction.customTerm-TMV43R7Z.js +16 -0
  226. package/dist/junction.unit.spec-NVBJTGA4.js +182 -0
  227. package/dist/launch.adhoc-AZG6QJG7.js +37 -0
  228. package/dist/leftlabel.sample-LYZG25RT.js +258 -0
  229. package/dist/lollipop-FJXVP5QM.js +166 -0
  230. package/dist/maf-OXJIJD6D.js +455 -0
  231. package/dist/maftimeline-75N6ZXEM.js +587 -0
  232. package/dist/matrix-QFKGEW5A.js +54 -0
  233. package/dist/matrix-XT7LUV5K.js +59 -0
  234. package/dist/matrix.cells-NB7LKKXV.js +26 -0
  235. package/dist/matrix.config-X6HS4UGD.js +37 -0
  236. package/dist/matrix.data-VLFF34SS.js +23 -0
  237. package/dist/matrix.groups-F62TSKIG.js +26 -0
  238. package/dist/matrix.integration.spec-7QBYWHW6.js +3160 -0
  239. package/dist/matrix.integration.spec-7QBYWHW6.js.map +7 -0
  240. package/dist/matrix.interactivity-2FBXB52E.js +37 -0
  241. package/dist/matrix.layout-6TPVKLSX.js +39 -0
  242. package/dist/matrix.legend-L4ULBMGX.js +20 -0
  243. package/dist/matrix.renderers-DK6YRLO2.js +34 -0
  244. package/dist/matrix.serieses-DCRJLJ3H.js +19 -0
  245. package/dist/matrix.sort-XSGPH44J.js +26 -0
  246. package/dist/matrix.sort.unit.spec-JF75F4I4.js +468 -0
  247. package/dist/matrix.sorterUi-WL5I6S3K.js +16 -0
  248. package/dist/matrix.sorterUi.unit.spec-66JMV5BK.js +338 -0
  249. package/dist/matrix.unit.spec-36AR4I43.js +150 -0
  250. package/dist/mavb-ZH4RO77H.js +727 -0
  251. package/dist/mds.fimo-MVP2G5PS.js +513 -0
  252. package/dist/mds.samplescatterplot-GYJ3OI4N.js +1545 -0
  253. package/dist/mds.survivalplot-Q6MYQGTB.js +477 -0
  254. package/dist/multivalue-BGFMPH4X.js +83 -0
  255. package/dist/numericDictTermCluster-FNNVLIWB.js +63 -0
  256. package/dist/oncomatrix-LIIALWWN.js +290 -0
  257. package/dist/oncomatrix.spec-NEMLM2ZN.js +443 -0
  258. package/dist/plot.2dvaf-HJO3SKNK.js +372 -0
  259. package/dist/plot.app-WSLFOFSR.js +36 -0
  260. package/dist/plot.barplot-SPI5JA37.js +97 -0
  261. package/dist/plot.boxplot-4W3XEY5I.js +146 -0
  262. package/dist/plot.brainImaging-KEOUTYIB.js +51 -0
  263. package/dist/plot.disco-7IDMKNAQ.js +99 -0
  264. package/dist/plot.ssgq-IOKUGDC4.js +134 -0
  265. package/dist/plot.vaf2cov-SFSZ6M43.js +253 -0
  266. package/dist/polar2-PLPE5TX5.js +232 -0
  267. package/dist/profileForms-ZDHG67GM.js +941 -0
  268. package/dist/profilePlot-UUZA2YG6.js +49 -0
  269. package/dist/proteinView-GHS3XARL.js +1357 -0
  270. package/dist/proteomeCohortCompare-TQ3BGIPS.js +912 -0
  271. package/dist/pseudbulk.unit.spec-HFESRN7A.js +86 -0
  272. package/dist/pseudbulk.unit.spec-HFESRN7A.js.map +7 -0
  273. package/dist/pseudobulk-ODXYIUD5.js +35 -0
  274. package/dist/qualitative-WOSYAIGQ.js +38 -0
  275. package/dist/radar2-2KXBS3Y3.js +327 -0
  276. package/dist/radarFacility2-JCOKJQQF.js +335 -0
  277. package/dist/rememberedGvQ.unit.spec-DYRO2LO5.js +211 -0
  278. package/dist/render-IJ6GE3NE.js +33 -0
  279. package/dist/report-WLLFUA7L.js +217 -0
  280. package/dist/sampleView-LPKSYUNF.js +43 -0
  281. package/dist/samplelst-MNI2MGMT.js +106 -0
  282. package/dist/samplematrix-KEKJP2B4.js +2193 -0
  283. package/dist/sc-ZYKFRJU4.js +81 -0
  284. package/dist/scatter-BAEZOFWA.js +88 -0
  285. package/dist/scatter-IGFBIZ3B.js +925 -0
  286. package/dist/scatter-IGFBIZ3B.js.map +7 -0
  287. package/dist/selectGenomeWithTklst-HBHRXEDY.js +129 -0
  288. package/dist/singleCellCellType-PMFDV24B.js +33 -0
  289. package/dist/singleCellCellType.unit.spec-ZLYDUDIY.js +154 -0
  290. package/dist/singleCellGeneExpression-SUYO3HR3.js +33 -0
  291. package/dist/singleCellGeneExpression.unit.spec-3N3HRXFN.js +148 -0
  292. package/dist/singleCellNumericValue-BV7C6Y34.js +33 -0
  293. package/dist/singleCellNumericValue.unit.spec-7VJOMYQ6.js +416 -0
  294. package/dist/singleCellNumericValue.unit.spec-7VJOMYQ6.js.map +7 -0
  295. package/dist/singleCellPlot-BG7UJOHA.js +48 -0
  296. package/dist/singlecell-BANNFGBS.js +81 -0
  297. package/dist/singlecell-ZUTL5ZWE.js +1566 -0
  298. package/dist/snp-BHG4NVK4.js +33 -0
  299. package/dist/snp.unit.spec-Q3AZHQRC.js +171 -0
  300. package/dist/snplocus-HTJL63M3.js +203 -0
  301. package/dist/spliceevent.a53ss.diagram-UKRIP7EP.js +146 -0
  302. package/dist/spliceevent.exonskip.diagram-CU777CXQ.js +278 -0
  303. package/dist/spliceevent.noeventdiagram-LGLXCF25.js +455 -0
  304. package/dist/ssGSEA-BIEEKAKX.js +33 -0
  305. package/dist/ssGSEA.unit.spec-YD4UDIRH.js +83 -0
  306. package/dist/stattable-LFR3RSD6.js +117 -0
  307. package/dist/studyCatalog-RINIZ277.js +414 -0
  308. package/dist/summarizeCnvGeneexp-ZQFNPR65.js +158 -0
  309. package/dist/summarizeGeneexpSurvival-GIS7XMMH.js +105 -0
  310. package/dist/summarizeMutationCnv-FWF7YIGR.js +159 -0
  311. package/dist/summarizeMutationDiagnosis-V5L2OKTK.js +35 -0
  312. package/dist/summarizeMutationSurvival-LAUUF6XN.js +99 -0
  313. package/dist/summary-OMU3ACNE.js +44 -0
  314. package/dist/summary.integration.spec-6JZAT73L.js +409 -0
  315. package/dist/summaryInput-QIKL3HDD.js +242 -0
  316. package/dist/sunburst-32IW2R57.js +278 -0
  317. package/dist/survival-BMOPVAN2.js +53 -0
  318. package/dist/survival-H5AWMQ36.js +1248 -0
  319. package/dist/survival.integration.spec-66UOWSZG.js +613 -0
  320. package/dist/survival.integration.spec-66UOWSZG.js.map +7 -0
  321. package/dist/svgraph-B75FS3BB.js +1382 -0
  322. package/dist/svmr-IUEUOHVO.js +3837 -0
  323. package/dist/table-YAAH7WR6.js +197 -0
  324. package/dist/termCollection-7F5ZG2DB.js +252 -0
  325. package/dist/termCollection-KNFUELYY.js +33 -0
  326. package/dist/termCollection.unit.spec-S6M6QC4C.js +299 -0
  327. package/dist/termCollectionFractionSelection-X22VMJWY.js +42 -0
  328. package/dist/termCollectionFractionSelection.unit.spec-ELU6SD7P.js +188 -0
  329. package/dist/tk-TT666UVE.js +41 -0
  330. package/dist/tk-UOPNJ323.js +1121 -0
  331. package/dist/tp.ui-HGAHRKO5.js +1454 -0
  332. package/dist/tvs.dt-H7YYR4EB.js +34 -0
  333. package/dist/tvs.dtcnv.categorical-IPJTKGMF.js +35 -0
  334. package/dist/tvs.dtcnv.continuous-XY5XZ4GH.js +67 -0
  335. package/dist/tvs.dtfusion-VFCBMXRM.js +35 -0
  336. package/dist/tvs.dtitd-RZVW6FTR.js +35 -0
  337. package/dist/tvs.dtsnvindel-IDPJWSGC.js +35 -0
  338. package/dist/tvs.dtsv-QERP756F.js +35 -0
  339. package/dist/tvs.samplelst-6KNDHBIU.js +98 -0
  340. package/dist/tvs.termCollection-GWPJK3NE.js +124 -0
  341. package/dist/vocabulary-C5FIZMPQ.js +36 -0
  342. package/dist/vocabulary-C5FIZMPQ.js.map +7 -0
  343. package/dist/wsi.direct-2RBCBXDA.js +8343 -0
  344. package/package.json +3 -3
  345. package/dist/2dmaf-32F56QBJ.js +0 -1367
  346. package/dist/AggMatrixInput-RDFMGV47.js +0 -277
  347. package/dist/AggMatrixInput-RDFMGV47.js.map +0 -7
  348. package/dist/AggregateMatrix-TPXNNWVD.js +0 -41
  349. package/dist/AppHeader-SEJXDJE3.js +0 -830
  350. package/dist/BoxPlot-LOAO2MDO.js +0 -1211
  351. package/dist/CorrelationVolcano-AU6ZAFPG.js +0 -614
  352. package/dist/CorrelationVolcano-AU6ZAFPG.js.map +0 -7
  353. package/dist/Cuminc-O533BXFY.js +0 -1219
  354. package/dist/DE-FDAUNOWU.js +0 -89
  355. package/dist/DEinput-TF2VYTIJ.js +0 -499
  356. package/dist/DM-42YN3OEO.js +0 -90
  357. package/dist/DifferentialAnalysis-H5NBPR3P.js +0 -237
  358. package/dist/DifferentialAnalysis-H5NBPR3P.js.map +0 -7
  359. package/dist/Disco-FGFHIKUR.js +0 -3389
  360. package/dist/Disco.UI-YGIU2JPM.js +0 -243
  361. package/dist/DmrPlot-EQFXMAW5.js +0 -637
  362. package/dist/DmrPlot-EQFXMAW5.js.map +0 -7
  363. package/dist/GB-244UT5VU.js +0 -1391
  364. package/dist/GB-244UT5VU.js.map +0 -7
  365. package/dist/GSEA-KXQBR3HH.js +0 -851
  366. package/dist/GSEA-KXQBR3HH.js.map +0 -7
  367. package/dist/GeneExpInput-ZY6SHXTX.js +0 -42
  368. package/dist/Geomap-6ZV4AM23.js +0 -84
  369. package/dist/HicApp-4UHX2YGP.js +0 -2245
  370. package/dist/IDCViewer-AB6LLO64.js +0 -10812
  371. package/dist/NumBinaryEditor-CGSO2T4L.js +0 -279
  372. package/dist/NumBinaryEditor.unit.spec-3QHARZQJ.js +0 -312
  373. package/dist/NumContEditor-YLKSC4Y2.js +0 -105
  374. package/dist/NumContEditor.unit.spec-L3GC3ZTJ.js +0 -164
  375. package/dist/NumCustomBinEditor-K3XSFHCC.js +0 -33
  376. package/dist/NumCustomBinEditor.unit.spec-2FUHE6BX.js +0 -397
  377. package/dist/NumDiscreteEditor-RJCSIW4R.js +0 -170
  378. package/dist/NumDiscreteEditor.unit.spec-CUA6BOIS.js +0 -233
  379. package/dist/NumRegularBinEditor-C3VIFDS4.js +0 -33
  380. package/dist/NumRegularBinEditor.unit.spec-V2UJ5FLH.js +0 -278
  381. package/dist/NumSplineEditor-XBE7OV7P.js +0 -210
  382. package/dist/NumSplineEditor.unit.spec-CKRRI4US.js +0 -224
  383. package/dist/NumericDensity-ZL7UY7TL.js +0 -33
  384. package/dist/NumericDensity.unit.spec-CWTMSR56.js +0 -418
  385. package/dist/NumericHandler-56ENFMNK.js +0 -34
  386. package/dist/NumericHandler.unit.spec-3YW34TTJ.js +0 -214
  387. package/dist/ProteomeInput-HIS4GYWH.js +0 -388
  388. package/dist/Regression-C5GZYLEN.js +0 -1416
  389. package/dist/Regression-C5GZYLEN.js.map +0 -7
  390. package/dist/RunChart2-X5WKYLPQ.js +0 -749
  391. package/dist/SC-3Y5J65DT.js +0 -1107
  392. package/dist/SC-3Y5J65DT.js.map +0 -7
  393. package/dist/Violin-F3QS2EMJ.js +0 -1082
  394. package/dist/Violin-F3QS2EMJ.js.map +0 -7
  395. package/dist/Volcano-ZNYDKP2O.js +0 -1649
  396. package/dist/Volcano-ZNYDKP2O.js.map +0 -7
  397. package/dist/Wsi-B6EIGTI2.js +0 -609
  398. package/dist/Wsi-B6EIGTI2.js.map +0 -7
  399. package/dist/adSandbox-A52OQSOW.js +0 -33
  400. package/dist/animatedBubbleChart-OQOZ3WFK.js +0 -547
  401. package/dist/app-4KIKXQX4.js +0 -32
  402. package/dist/app-NZUNKWKK.js +0 -42
  403. package/dist/bam-SME7YD3E.js +0 -876
  404. package/dist/barchart-ESY6FOS4.js +0 -42
  405. package/dist/barchart2-XEJZGCES.js +0 -309
  406. package/dist/block-747IK2EW.js +0 -6249
  407. package/dist/block-747IK2EW.js.map +0 -7
  408. package/dist/block.init-ITZ42K43.js +0 -33
  409. package/dist/block.mds.expressionrank-Q63IJAJK.js +0 -354
  410. package/dist/block.mds.geneboxplot-EZIKAIKC.js +0 -823
  411. package/dist/block.mds.junction-TJXFKZ2Q.js +0 -1539
  412. package/dist/block.mds.svcnv-WSIEAII6.js +0 -6796
  413. package/dist/block.svg-CQX5W6R4.js +0 -159
  414. package/dist/block.tk.aicheck-J4MQ4BSD.js +0 -278
  415. package/dist/block.tk.ase-2JFNPWCZ.js +0 -360
  416. package/dist/block.tk.bam-RBQ4AXSQ.js +0 -1901
  417. package/dist/block.tk.bedgraphdot-ZQBOMVTO.js +0 -379
  418. package/dist/block.tk.bigwig.ui-U5IBO3VF.js +0 -206
  419. package/dist/block.tk.hicstraw-ZRZMFLLX.js +0 -818
  420. package/dist/block.tk.junction-7U7ABE4O.js +0 -2358
  421. package/dist/block.tk.junction.textmatrixui-AEXZ7W3U.js +0 -194
  422. package/dist/block.tk.ld-E7WPFL5P.js +0 -94
  423. package/dist/block.tk.menu-AITMEZTZ.js +0 -1024
  424. package/dist/block.tk.pgv-EDPZHI5L.js +0 -938
  425. package/dist/brainImaging-35LPNBDR.js +0 -555
  426. package/dist/brainRegions-JMTQT4X3.js +0 -217
  427. package/dist/bubbleHeatmap-FMBKMDUL.js +0 -378
  428. package/dist/cellTypeBubbleHeatmap-ZPTAGEWW.js +0 -278
  429. package/dist/chunk-2GBG3KA7.js +0 -129
  430. package/dist/chunk-2IVN5DWA.js +0 -302
  431. package/dist/chunk-36AAUYZE.js +0 -194
  432. package/dist/chunk-3K7AYA3M.js +0 -54
  433. package/dist/chunk-4JFFFGL3.js +0 -468
  434. package/dist/chunk-4KJSNR5E.js +0 -562
  435. package/dist/chunk-52QHIKH2.js +0 -2139
  436. package/dist/chunk-52QHIKH2.js.map +0 -7
  437. package/dist/chunk-5ALGKNTQ.js +0 -6360
  438. package/dist/chunk-5JCTTSV4.js +0 -480
  439. package/dist/chunk-5W7K7STT.js +0 -26
  440. package/dist/chunk-6CIGRV5K.js +0 -677
  441. package/dist/chunk-6CIGRV5K.js.map +0 -7
  442. package/dist/chunk-6U2OPC6J.js +0 -176
  443. package/dist/chunk-7AHTS4BP.js +0 -382
  444. package/dist/chunk-7HFAEB3C.js +0 -55
  445. package/dist/chunk-7HGZRJZZ.js +0 -98
  446. package/dist/chunk-A2ORIMUJ.js +0 -339
  447. package/dist/chunk-A32SGNCT.js +0 -1233
  448. package/dist/chunk-AKA6RWLC.js +0 -217
  449. package/dist/chunk-AMVZ6KT5.js +0 -240
  450. package/dist/chunk-ASXUC6SM.js +0 -54
  451. package/dist/chunk-BCO5T43J.js +0 -379
  452. package/dist/chunk-BDQPMVKD.js +0 -783
  453. package/dist/chunk-BOQZOLRA.js +0 -274
  454. package/dist/chunk-BSCMVKBP.js +0 -5071
  455. package/dist/chunk-BZN2O76M.js +0 -119
  456. package/dist/chunk-BZZZQFTI.js +0 -34
  457. package/dist/chunk-CRHGXVUQ.js +0 -272
  458. package/dist/chunk-D6AB63O3.js +0 -216
  459. package/dist/chunk-D6AB63O3.js.map +0 -7
  460. package/dist/chunk-DPQP2GUW.js +0 -626
  461. package/dist/chunk-EKQ7NYOU.js +0 -276
  462. package/dist/chunk-EUQEQOFE.js +0 -141
  463. package/dist/chunk-FKA55PHV.js +0 -281
  464. package/dist/chunk-GVLWCGXX.js +0 -397
  465. package/dist/chunk-HLVWCJRO.js +0 -518
  466. package/dist/chunk-HPAW7XDM.js +0 -178
  467. package/dist/chunk-HPAW7XDM.js.map +0 -7
  468. package/dist/chunk-IV57XNTG.js +0 -123
  469. package/dist/chunk-JMAFJKGG.js +0 -243
  470. package/dist/chunk-JZHRVYNS.js +0 -2676
  471. package/dist/chunk-K6YUMBDY.js +0 -55
  472. package/dist/chunk-K6YUMBDY.js.map +0 -7
  473. package/dist/chunk-KTKZSYIH.js +0 -24
  474. package/dist/chunk-KTKZSYIH.js.map +0 -7
  475. package/dist/chunk-L6WNBKYN.js +0 -158
  476. package/dist/chunk-LGR6CJTW.js +0 -2853
  477. package/dist/chunk-LOWJQFCC.js +0 -550
  478. package/dist/chunk-M5SYLBBC.js +0 -2327
  479. package/dist/chunk-MKAILEWO.js +0 -59
  480. package/dist/chunk-N4PDPZWQ.js +0 -4366
  481. package/dist/chunk-N4PDPZWQ.js.map +0 -7
  482. package/dist/chunk-OIJ6GRVS.js +0 -134
  483. package/dist/chunk-ONVIVITY.js +0 -203
  484. package/dist/chunk-OQX3HO46.js +0 -56
  485. package/dist/chunk-OQX3HO46.js.map +0 -7
  486. package/dist/chunk-OYLGAFFY.js +0 -31
  487. package/dist/chunk-P7DIIYCX.js +0 -197
  488. package/dist/chunk-P7DIIYCX.js.map +0 -7
  489. package/dist/chunk-PC4MFDHP.js +0 -24613
  490. package/dist/chunk-PC4MFDHP.js.map +0 -7
  491. package/dist/chunk-PGKOJYV6.js +0 -50
  492. package/dist/chunk-PGKOJYV6.js.map +0 -7
  493. package/dist/chunk-PPSWNLMG.js +0 -402
  494. package/dist/chunk-PPSWNLMG.js.map +0 -7
  495. package/dist/chunk-R624P2GE.js +0 -263
  496. package/dist/chunk-RBSAEAQV.js +0 -446
  497. package/dist/chunk-RUBZCKIX.js +0 -1608
  498. package/dist/chunk-RUBZCKIX.js.map +0 -7
  499. package/dist/chunk-RZ3KEFZ2.js +0 -339
  500. package/dist/chunk-SS66BHGA.js +0 -103
  501. package/dist/chunk-SU63FEY6.js +0 -294
  502. package/dist/chunk-SVC65ZPG.js +0 -102
  503. package/dist/chunk-TG3QBMDK.js +0 -102
  504. package/dist/chunk-TMXW5HVE.js +0 -1278
  505. package/dist/chunk-TPDBOH3A.js +0 -1339
  506. package/dist/chunk-U5RWKZVS.js +0 -1720
  507. package/dist/chunk-U5RWKZVS.js.map +0 -7
  508. package/dist/chunk-UYKZ5HXA.js +0 -1986
  509. package/dist/chunk-VOYUJJQ6.js +0 -70
  510. package/dist/chunk-W4RYRU5D.js +0 -38
  511. package/dist/chunk-WFSMIVJT.js +0 -2784
  512. package/dist/chunk-Y4PX2ECH.js +0 -299
  513. package/dist/chunk-YKM46UX5.js +0 -170
  514. package/dist/chunk-Z7AO6A7M.js +0 -14
  515. package/dist/chunk-ZENZ5H2Q.js +0 -49
  516. package/dist/cohort-Q7TW5XTY.js +0 -70
  517. package/dist/condition-H6LBUHIF.js +0 -327
  518. package/dist/controls-DWDKFDXY.js +0 -34
  519. package/dist/controls.config-KF7PHZSG.js +0 -34
  520. package/dist/correlation-YMSARIER.js +0 -95
  521. package/dist/customdata.inputui-KEFE7ZHS.js +0 -284
  522. package/dist/dataDownload-G7TGPFGL.js +0 -329
  523. package/dist/databrowser.ui-NFIIFQJZ.js +0 -425
  524. package/dist/dictionary-ERJQMALC.js +0 -113
  525. package/dist/dnaMethylation-KVCXKAU3.js +0 -33
  526. package/dist/dnaMethylation.integration.spec-3NXGGG4J.js +0 -198
  527. package/dist/dofetch-YRWLEQEH.js +0 -48
  528. package/dist/e2pca-M2F2CI6I.js +0 -344
  529. package/dist/ep-QAEG4RV4.js +0 -1249
  530. package/dist/expclust.gdc.spec-P77T6JR2.js +0 -302
  531. package/dist/facet-LJTSTASE.js +0 -519
  532. package/dist/gb-KSB2DQHH.js +0 -81
  533. package/dist/geneExpClustering-KHDCPE65.js +0 -244
  534. package/dist/geneExpression-AWWMOUAR.js +0 -310
  535. package/dist/geneExpression-Z2EDR6EN.js +0 -33
  536. package/dist/geneExpression.unit.spec-WB2ESPKT.js +0 -128
  537. package/dist/geneExpression.unit.spec-WB2ESPKT.js.map +0 -7
  538. package/dist/geneORA-NGZTMFSJ.js +0 -273
  539. package/dist/geneRanking-AYNBGFKU.js +0 -548
  540. package/dist/geneVariant-AL64NDHH.js +0 -36
  541. package/dist/geneVariant-QMKR3LUV.js +0 -286
  542. package/dist/geneVariant-QMKR3LUV.js.map +0 -7
  543. package/dist/geneVariant.integration.spec-N3U5CIRT.js +0 -489
  544. package/dist/geneVariant.integration.spec-N3U5CIRT.js.map +0 -7
  545. package/dist/genefusion.ui-IWJMF2BM.js +0 -303
  546. package/dist/geneset-APCO4BRX.js +0 -203
  547. package/dist/genomeBrowser.spec-JTCVUTO5.js +0 -276
  548. package/dist/grin2-FVX6AIST.js +0 -70
  549. package/dist/grin2-LF46UKFY.js +0 -1137
  550. package/dist/grin2-LF46UKFY.js.map +0 -7
  551. package/dist/hierCluster-4DRHXD6W.js +0 -55
  552. package/dist/hierCluster-SFRQK3PS.js +0 -59
  553. package/dist/hierCluster.config-G2TFGBYF.js +0 -36
  554. package/dist/hierCluster.integration.spec-ZUZKCG6A.js +0 -483
  555. package/dist/hierCluster.interactivity-LQA6J56H.js +0 -49
  556. package/dist/hierCluster.renderers-TZZJEVFO.js +0 -19
  557. package/dist/imagePlot-OUHFWYKT.js +0 -156
  558. package/dist/importPlot-7V456QK7.js +0 -8
  559. package/dist/isoformExpression-NGUJJ6VI.js +0 -35
  560. package/dist/isoformExpression.unit.spec-DCRPXPBY.js +0 -237
  561. package/dist/junction-QYKLNXIW.js +0 -36
  562. package/dist/junction.customTerm-EHOOBR4V.js +0 -16
  563. package/dist/junction.unit.spec-LDNY7OFK.js +0 -182
  564. package/dist/launch.adhoc-FF7B3UG6.js +0 -37
  565. package/dist/leftlabel.sample-BTHMKLGF.js +0 -258
  566. package/dist/lollipop-H3UCNMHN.js +0 -166
  567. package/dist/maf-KWGUTPKO.js +0 -455
  568. package/dist/maftimeline-UD5VE4UW.js +0 -587
  569. package/dist/matrix-DLCX6GOO.js +0 -59
  570. package/dist/matrix-TIV42IQB.js +0 -54
  571. package/dist/matrix.cells-J3QZ7C6U.js +0 -26
  572. package/dist/matrix.config-VNMS6B7J.js +0 -37
  573. package/dist/matrix.data-PIE3TLKD.js +0 -23
  574. package/dist/matrix.groups-URBU775S.js +0 -26
  575. package/dist/matrix.integration.spec-LC6YMEKP.js +0 -3160
  576. package/dist/matrix.integration.spec-LC6YMEKP.js.map +0 -7
  577. package/dist/matrix.interactivity-W5AFOAQN.js +0 -37
  578. package/dist/matrix.layout-LU3NIJAL.js +0 -39
  579. package/dist/matrix.legend-LTP6ETZO.js +0 -20
  580. package/dist/matrix.renderers-762XI65L.js +0 -34
  581. package/dist/matrix.serieses-FHDBRPZA.js +0 -19
  582. package/dist/matrix.sort-Q6A6UWMY.js +0 -26
  583. package/dist/matrix.sort.unit.spec-CTCOPKVS.js +0 -468
  584. package/dist/matrix.sorterUi-4M5AU5EL.js +0 -16
  585. package/dist/matrix.sorterUi.unit.spec-Y7GC3PM5.js +0 -338
  586. package/dist/matrix.unit.spec-DROPHFTM.js +0 -150
  587. package/dist/mavb-BWA73N3U.js +0 -727
  588. package/dist/mds.fimo-3UJWIH2J.js +0 -513
  589. package/dist/mds.samplescatterplot-EUS7DCSQ.js +0 -1545
  590. package/dist/mds.survivalplot-77UEBQIC.js +0 -477
  591. package/dist/multivalue-KZ2DMVIR.js +0 -83
  592. package/dist/numericDictTermCluster-C2MYJYPZ.js +0 -63
  593. package/dist/oncomatrix-6LGB3M7R.js +0 -290
  594. package/dist/oncomatrix.spec-UWMSLOHW.js +0 -443
  595. package/dist/plot.2dvaf-LZAVWH65.js +0 -372
  596. package/dist/plot.app-OEWE3AYV.js +0 -36
  597. package/dist/plot.barplot-VIBHGTUT.js +0 -97
  598. package/dist/plot.boxplot-NQI3PSKR.js +0 -146
  599. package/dist/plot.brainImaging-3MTTCZHI.js +0 -51
  600. package/dist/plot.disco-HODBY7SO.js +0 -99
  601. package/dist/plot.ssgq-4URQE673.js +0 -134
  602. package/dist/plot.vaf2cov-QIJNEKCK.js +0 -253
  603. package/dist/polar2-GVFQNSLK.js +0 -232
  604. package/dist/profileForms-Z22CJXI4.js +0 -941
  605. package/dist/profilePlot-IVQZBSID.js +0 -49
  606. package/dist/proteinView-AUK634AU.js +0 -1357
  607. package/dist/proteomeCohortCompare-7G2F35H5.js +0 -912
  608. package/dist/pseudbulk.unit.spec-JDKUQUCM.js +0 -106
  609. package/dist/pseudbulk.unit.spec-JDKUQUCM.js.map +0 -7
  610. package/dist/pseudobulk-QTCUSH5I.js +0 -37
  611. package/dist/qualitative-7ST7SSBT.js +0 -38
  612. package/dist/radar2-CEE6SNBS.js +0 -327
  613. package/dist/radarFacility2-OSKDYIK7.js +0 -335
  614. package/dist/rememberedGvQ.unit.spec-RYFUJ2NW.js +0 -211
  615. package/dist/render-MAD3WMVD.js +0 -33
  616. package/dist/report-6JXJVSEB.js +0 -217
  617. package/dist/sampleView-SG3QYZKQ.js +0 -43
  618. package/dist/samplelst-R765UFP6.js +0 -106
  619. package/dist/samplematrix-EBJYE5SM.js +0 -2193
  620. package/dist/sc-7ZXPFDHD.js +0 -81
  621. package/dist/scatter-3GUL4KF3.js +0 -88
  622. package/dist/scatter-RHUVER53.js +0 -920
  623. package/dist/scatter-RHUVER53.js.map +0 -7
  624. package/dist/selectGenomeWithTklst-K4YXGJYG.js +0 -129
  625. package/dist/singleCellCellType-TU5VTPLP.js +0 -33
  626. package/dist/singleCellCellType.unit.spec-IRITQIGT.js +0 -154
  627. package/dist/singleCellGeneExpression-3IL52QDK.js +0 -33
  628. package/dist/singleCellGeneExpression.unit.spec-WXC4C37T.js +0 -148
  629. package/dist/singleCellPlot-XG3HZS7I.js +0 -48
  630. package/dist/singlecell-BRF2HAV2.js +0 -81
  631. package/dist/singlecell-KVCJF2HI.js +0 -1566
  632. package/dist/snp-RMZRB426.js +0 -33
  633. package/dist/snp.unit.spec-JF6KR2NT.js +0 -171
  634. package/dist/snplocus-AHUFHQ3Q.js +0 -203
  635. package/dist/spliceevent.a53ss.diagram-OSZZ2CF2.js +0 -146
  636. package/dist/spliceevent.exonskip.diagram-AMA2D2OL.js +0 -278
  637. package/dist/spliceevent.noeventdiagram-RKTUXH5D.js +0 -455
  638. package/dist/ssGSEA-7RKWYZKX.js +0 -33
  639. package/dist/ssGSEA.unit.spec-XLCZHH7S.js +0 -83
  640. package/dist/stattable-NDYUCLVZ.js +0 -117
  641. package/dist/studyCatalog-TAXRF5NS.js +0 -414
  642. package/dist/summarizeCnvGeneexp-3QLHU6N7.js +0 -158
  643. package/dist/summarizeGeneexpSurvival-ARI4MPFX.js +0 -105
  644. package/dist/summarizeMutationCnv-W7V7CKPI.js +0 -159
  645. package/dist/summarizeMutationDiagnosis-GCL4SRON.js +0 -35
  646. package/dist/summarizeMutationSurvival-6TTMSRRX.js +0 -99
  647. package/dist/summary-OUYDWLBF.js +0 -44
  648. package/dist/summary.integration.spec-4GTCG6HY.js +0 -409
  649. package/dist/summaryInput-UK3TLC7M.js +0 -242
  650. package/dist/sunburst-2UFHMNH3.js +0 -278
  651. package/dist/survival-SPWYSDVB.js +0 -53
  652. package/dist/survival-TL6UZ6FQ.js +0 -1248
  653. package/dist/survival.integration.spec-WWZELTKZ.js +0 -613
  654. package/dist/survival.integration.spec-WWZELTKZ.js.map +0 -7
  655. package/dist/svgraph-Z543MLIN.js +0 -1382
  656. package/dist/svmr-SZCAOAIF.js +0 -3837
  657. package/dist/table-IAQ6J4DO.js +0 -197
  658. package/dist/termCollection-3NGHR7QN.js +0 -252
  659. package/dist/termCollection-7P3WU6X6.js +0 -33
  660. package/dist/termCollection.unit.spec-EPYC7LOA.js +0 -299
  661. package/dist/termCollectionFractionSelection-YKIE6BME.js +0 -42
  662. package/dist/termCollectionFractionSelection.unit.spec-AG2CZPGZ.js +0 -188
  663. package/dist/tk-TOXMU4GT.js +0 -1121
  664. package/dist/tk-X454XH5N.js +0 -41
  665. package/dist/tp.ui-FDQ76KPL.js +0 -1454
  666. package/dist/tvs.dt-U77PCG6X.js +0 -34
  667. package/dist/tvs.dtcnv.categorical-XYZU4XLO.js +0 -35
  668. package/dist/tvs.dtcnv.continuous-4GJILFGP.js +0 -67
  669. package/dist/tvs.dtfusion-7YROAHVI.js +0 -35
  670. package/dist/tvs.dtitd-MIYU4ZHH.js +0 -35
  671. package/dist/tvs.dtsnvindel-XLDY7KWB.js +0 -35
  672. package/dist/tvs.dtsv-YMLJ37YR.js +0 -35
  673. package/dist/tvs.samplelst-KIVEXJKD.js +0 -98
  674. package/dist/tvs.termCollection-4CQV3EB3.js +0 -124
  675. package/dist/vocabulary-64GO4YDB.js +0 -36
  676. package/dist/wsi.direct-5MQVRJZX.js +0 -8343
  677. /package/dist/{2dmaf-32F56QBJ.js.map → 2dmaf-VTMPVZGT.js.map} +0 -0
  678. /package/dist/{AggregateMatrix-TPXNNWVD.js.map → AggregateMatrix-DPCHUOMF.js.map} +0 -0
  679. /package/dist/{AppHeader-SEJXDJE3.js.map → AppHeader-RA7T467G.js.map} +0 -0
  680. /package/dist/{BoxPlot-LOAO2MDO.js.map → BoxPlot-7Q7SMT26.js.map} +0 -0
  681. /package/dist/{Cuminc-O533BXFY.js.map → Cuminc-ZN53C3MD.js.map} +0 -0
  682. /package/dist/{DE-FDAUNOWU.js.map → DE-BEWW5AIG.js.map} +0 -0
  683. /package/dist/{DEinput-TF2VYTIJ.js.map → DEinput-SJITUJF2.js.map} +0 -0
  684. /package/dist/{DM-42YN3OEO.js.map → DM-2LBNE4WE.js.map} +0 -0
  685. /package/dist/{Disco-FGFHIKUR.js.map → Disco-PTZQF7IM.js.map} +0 -0
  686. /package/dist/{Disco.UI-YGIU2JPM.js.map → Disco.UI-NBR67N5M.js.map} +0 -0
  687. /package/dist/{GeneExpInput-ZY6SHXTX.js.map → GeneExpInput-DYBK54HC.js.map} +0 -0
  688. /package/dist/{Geomap-6ZV4AM23.js.map → Geomap-QRD2WZVL.js.map} +0 -0
  689. /package/dist/{HicApp-4UHX2YGP.js.map → HicApp-VKET4QHD.js.map} +0 -0
  690. /package/dist/{IDCViewer-AB6LLO64.js.map → IDCViewer-RLLTXGD7.js.map} +0 -0
  691. /package/dist/{NumBinaryEditor-CGSO2T4L.js.map → NumBinaryEditor-GYHOYPQL.js.map} +0 -0
  692. /package/dist/{NumBinaryEditor.unit.spec-3QHARZQJ.js.map → NumBinaryEditor.unit.spec-E2HKBWOO.js.map} +0 -0
  693. /package/dist/{NumContEditor-YLKSC4Y2.js.map → NumContEditor-3V76ZSEY.js.map} +0 -0
  694. /package/dist/{NumContEditor.unit.spec-L3GC3ZTJ.js.map → NumContEditor.unit.spec-RTT5Q5E5.js.map} +0 -0
  695. /package/dist/{NumCustomBinEditor-K3XSFHCC.js.map → NumCustomBinEditor-O5DMPY7H.js.map} +0 -0
  696. /package/dist/{NumCustomBinEditor.unit.spec-2FUHE6BX.js.map → NumCustomBinEditor.unit.spec-5LZBP2JL.js.map} +0 -0
  697. /package/dist/{NumDiscreteEditor-RJCSIW4R.js.map → NumDiscreteEditor-DFOJ7AIH.js.map} +0 -0
  698. /package/dist/{NumDiscreteEditor.unit.spec-CUA6BOIS.js.map → NumDiscreteEditor.unit.spec-PPJGEBFX.js.map} +0 -0
  699. /package/dist/{NumRegularBinEditor-C3VIFDS4.js.map → NumRegularBinEditor-O6RDO32C.js.map} +0 -0
  700. /package/dist/{NumRegularBinEditor.unit.spec-V2UJ5FLH.js.map → NumRegularBinEditor.unit.spec-GOB3BF25.js.map} +0 -0
  701. /package/dist/{NumSplineEditor-XBE7OV7P.js.map → NumSplineEditor-PUXJF2RW.js.map} +0 -0
  702. /package/dist/{NumSplineEditor.unit.spec-CKRRI4US.js.map → NumSplineEditor.unit.spec-4VOAAMOU.js.map} +0 -0
  703. /package/dist/{NumericDensity-ZL7UY7TL.js.map → NumericDensity-E6MH2THZ.js.map} +0 -0
  704. /package/dist/{NumericDensity.unit.spec-CWTMSR56.js.map → NumericDensity.unit.spec-IRPFBQUS.js.map} +0 -0
  705. /package/dist/{NumericHandler-56ENFMNK.js.map → NumericHandler-42RR54X3.js.map} +0 -0
  706. /package/dist/{NumericHandler.unit.spec-3YW34TTJ.js.map → NumericHandler.unit.spec-YYOO7XVT.js.map} +0 -0
  707. /package/dist/{ProteomeInput-HIS4GYWH.js.map → ProteomeInput-4N2G6IFX.js.map} +0 -0
  708. /package/dist/{RunChart2-X5WKYLPQ.js.map → RunChart2-VAX5JGZY.js.map} +0 -0
  709. /package/dist/{adSandbox-A52OQSOW.js.map → adSandbox-CLMUYNC3.js.map} +0 -0
  710. /package/dist/{animatedBubbleChart-OQOZ3WFK.js.map → animatedBubbleChart-GMLNYTQC.js.map} +0 -0
  711. /package/dist/{app-4KIKXQX4.js.map → app-2SFDRDN2.js.map} +0 -0
  712. /package/dist/{app-NZUNKWKK.js.map → app-QOZ36UR4.js.map} +0 -0
  713. /package/dist/{bam-SME7YD3E.js.map → bam-LLAK7FVG.js.map} +0 -0
  714. /package/dist/{barchart-ESY6FOS4.js.map → barchart-SEC6VKQ2.js.map} +0 -0
  715. /package/dist/{barchart2-XEJZGCES.js.map → barchart2-D4FXZCTU.js.map} +0 -0
  716. /package/dist/{block.init-ITZ42K43.js.map → block.init-UMRCAKCF.js.map} +0 -0
  717. /package/dist/{block.mds.expressionrank-Q63IJAJK.js.map → block.mds.expressionrank-LFPJ52SX.js.map} +0 -0
  718. /package/dist/{block.mds.geneboxplot-EZIKAIKC.js.map → block.mds.geneboxplot-2QIEN6AH.js.map} +0 -0
  719. /package/dist/{block.mds.junction-TJXFKZ2Q.js.map → block.mds.junction-Z4HUFSG2.js.map} +0 -0
  720. /package/dist/{block.mds.svcnv-WSIEAII6.js.map → block.mds.svcnv-3GXGY6ET.js.map} +0 -0
  721. /package/dist/{block.svg-CQX5W6R4.js.map → block.svg-7RCJLMAP.js.map} +0 -0
  722. /package/dist/{block.tk.aicheck-J4MQ4BSD.js.map → block.tk.aicheck-5N6EGZ6F.js.map} +0 -0
  723. /package/dist/{block.tk.ase-2JFNPWCZ.js.map → block.tk.ase-V3AJRYT6.js.map} +0 -0
  724. /package/dist/{block.tk.bam-RBQ4AXSQ.js.map → block.tk.bam-W6QOVVEU.js.map} +0 -0
  725. /package/dist/{block.tk.bedgraphdot-ZQBOMVTO.js.map → block.tk.bedgraphdot-FKTPJZTH.js.map} +0 -0
  726. /package/dist/{block.tk.bigwig.ui-U5IBO3VF.js.map → block.tk.bigwig.ui-Y3M2TDM2.js.map} +0 -0
  727. /package/dist/{block.tk.hicstraw-ZRZMFLLX.js.map → block.tk.hicstraw-3SWYTMFQ.js.map} +0 -0
  728. /package/dist/{block.tk.junction-7U7ABE4O.js.map → block.tk.junction-OXB22PDS.js.map} +0 -0
  729. /package/dist/{block.tk.junction.textmatrixui-AEXZ7W3U.js.map → block.tk.junction.textmatrixui-PWBLRGCO.js.map} +0 -0
  730. /package/dist/{block.tk.ld-E7WPFL5P.js.map → block.tk.ld-NTRJL5GA.js.map} +0 -0
  731. /package/dist/{block.tk.menu-AITMEZTZ.js.map → block.tk.menu-JIHSGGIO.js.map} +0 -0
  732. /package/dist/{block.tk.pgv-EDPZHI5L.js.map → block.tk.pgv-4Q6CY6QN.js.map} +0 -0
  733. /package/dist/{brainImaging-35LPNBDR.js.map → brainImaging-MBI4XTTU.js.map} +0 -0
  734. /package/dist/{brainRegions-JMTQT4X3.js.map → brainRegions-YVTAESRP.js.map} +0 -0
  735. /package/dist/{bubbleHeatmap-FMBKMDUL.js.map → bubbleHeatmap-ZKTA3AIG.js.map} +0 -0
  736. /package/dist/{cellTypeBubbleHeatmap-ZPTAGEWW.js.map → cellTypeBubbleHeatmap-GJZNXDG4.js.map} +0 -0
  737. /package/dist/{chunk-5ALGKNTQ.js.map → chunk-2RMSV4BS.js.map} +0 -0
  738. /package/dist/{chunk-Y4PX2ECH.js.map → chunk-33BE7AYS.js.map} +0 -0
  739. /package/dist/{chunk-BZN2O76M.js.map → chunk-3FEP6B5T.js.map} +0 -0
  740. /package/dist/{chunk-W4RYRU5D.js.map → chunk-4G73CMUL.js.map} +0 -0
  741. /package/dist/{chunk-FKA55PHV.js.map → chunk-5FRETII3.js.map} +0 -0
  742. /package/dist/{chunk-YKM46UX5.js.map → chunk-5LYVIIYR.js.map} +0 -0
  743. /package/dist/{chunk-A2ORIMUJ.js.map → chunk-6FG6JFZP.js.map} +0 -0
  744. /package/dist/{chunk-VOYUJJQ6.js.map → chunk-6LDKSKYQ.js.map} +0 -0
  745. /package/dist/{chunk-CRHGXVUQ.js.map → chunk-7FFTAYT4.js.map} +0 -0
  746. /package/dist/{chunk-RZ3KEFZ2.js.map → chunk-7GDRMBNO.js.map} +0 -0
  747. /package/dist/{chunk-UYKZ5HXA.js.map → chunk-A2UUXYH6.js.map} +0 -0
  748. /package/dist/{chunk-LGR6CJTW.js.map → chunk-AFQKYV4D.js.map} +0 -0
  749. /package/dist/{chunk-EKQ7NYOU.js.map → chunk-ANACCKCQ.js.map} +0 -0
  750. /package/dist/{chunk-4KJSNR5E.js.map → chunk-AR3HXZIW.js.map} +0 -0
  751. /package/dist/{chunk-RBSAEAQV.js.map → chunk-AVCEHJG7.js.map} +0 -0
  752. /package/dist/{chunk-OIJ6GRVS.js.map → chunk-BG3SGGVB.js.map} +0 -0
  753. /package/dist/{chunk-7AHTS4BP.js.map → chunk-CFZ2ZW3E.js.map} +0 -0
  754. /package/dist/{chunk-5W7K7STT.js.map → chunk-CKOU3P27.js.map} +0 -0
  755. /package/dist/{chunk-GVLWCGXX.js.map → chunk-CN6KJORZ.js.map} +0 -0
  756. /package/dist/{chunk-ONVIVITY.js.map → chunk-CYWEYHJQ.js.map} +0 -0
  757. /package/dist/{chunk-L6WNBKYN.js.map → chunk-D5ETVOOE.js.map} +0 -0
  758. /package/dist/{chunk-TG3QBMDK.js.map → chunk-DANF4CC5.js.map} +0 -0
  759. /package/dist/{chunk-TPDBOH3A.js.map → chunk-DNCFJTPI.js.map} +0 -0
  760. /package/dist/{chunk-5JCTTSV4.js.map → chunk-FNW6BKOA.js.map} +0 -0
  761. /package/dist/{chunk-3K7AYA3M.js.map → chunk-FR5USNAT.js.map} +0 -0
  762. /package/dist/{chunk-DPQP2GUW.js.map → chunk-GYE6FU7P.js.map} +0 -0
  763. /package/dist/{chunk-TMXW5HVE.js.map → chunk-IEIGHCZS.js.map} +0 -0
  764. /package/dist/{chunk-BSCMVKBP.js.map → chunk-JMDUO47F.js.map} +0 -0
  765. /package/dist/{chunk-ASXUC6SM.js.map → chunk-JTANDSTD.js.map} +0 -0
  766. /package/dist/{chunk-BCO5T43J.js.map → chunk-JTQPPUDG.js.map} +0 -0
  767. /package/dist/{chunk-2IVN5DWA.js.map → chunk-K32DV4QI.js.map} +0 -0
  768. /package/dist/{chunk-7HGZRJZZ.js.map → chunk-K77W4SSI.js.map} +0 -0
  769. /package/dist/{chunk-SVC65ZPG.js.map → chunk-KEHVNCFK.js.map} +0 -0
  770. /package/dist/{chunk-7HFAEB3C.js.map → chunk-MMKSXXU2.js.map} +0 -0
  771. /package/dist/{chunk-OYLGAFFY.js.map → chunk-NDOKW2HJ.js.map} +0 -0
  772. /package/dist/{chunk-HLVWCJRO.js.map → chunk-NGMM2MNC.js.map} +0 -0
  773. /package/dist/{chunk-JZHRVYNS.js.map → chunk-OEBGQKQR.js.map} +0 -0
  774. /package/dist/{chunk-4JFFFGL3.js.map → chunk-OI5KBFBE.js.map} +0 -0
  775. /package/dist/{chunk-JMAFJKGG.js.map → chunk-OWEBE64A.js.map} +0 -0
  776. /package/dist/{chunk-BDQPMVKD.js.map → chunk-P7X4LDW4.js.map} +0 -0
  777. /package/dist/{chunk-MKAILEWO.js.map → chunk-QD75Q5LM.js.map} +0 -0
  778. /package/dist/{chunk-EUQEQOFE.js.map → chunk-QGH5BM2D.js.map} +0 -0
  779. /package/dist/{chunk-AMVZ6KT5.js.map → chunk-QSOFGLWZ.js.map} +0 -0
  780. /package/dist/{chunk-AKA6RWLC.js.map → chunk-QXDGIQYA.js.map} +0 -0
  781. /package/dist/{chunk-6U2OPC6J.js.map → chunk-R2QE6ROO.js.map} +0 -0
  782. /package/dist/{chunk-SS66BHGA.js.map → chunk-RMHUDMZ7.js.map} +0 -0
  783. /package/dist/{chunk-IV57XNTG.js.map → chunk-SXB4IZQ7.js.map} +0 -0
  784. /package/dist/{chunk-R624P2GE.js.map → chunk-TYR355RM.js.map} +0 -0
  785. /package/dist/{chunk-WFSMIVJT.js.map → chunk-ULZPHJYD.js.map} +0 -0
  786. /package/dist/{chunk-Z7AO6A7M.js.map → chunk-VFUSBU43.js.map} +0 -0
  787. /package/dist/{chunk-BOQZOLRA.js.map → chunk-VOF6NWTS.js.map} +0 -0
  788. /package/dist/{chunk-M5SYLBBC.js.map → chunk-WGDJX7WZ.js.map} +0 -0
  789. /package/dist/{chunk-SU63FEY6.js.map → chunk-WIQVSCD5.js.map} +0 -0
  790. /package/dist/{chunk-2GBG3KA7.js.map → chunk-X4MV2M5F.js.map} +0 -0
  791. /package/dist/{chunk-ZENZ5H2Q.js.map → chunk-YHP7MYB7.js.map} +0 -0
  792. /package/dist/{chunk-LOWJQFCC.js.map → chunk-YHWQWVWX.js.map} +0 -0
  793. /package/dist/{chunk-A32SGNCT.js.map → chunk-YKZOQTT4.js.map} +0 -0
  794. /package/dist/{chunk-BZZZQFTI.js.map → chunk-Z5HU276I.js.map} +0 -0
  795. /package/dist/{chunk-36AAUYZE.js.map → chunk-Z6MCBFDM.js.map} +0 -0
  796. /package/dist/{cohort-Q7TW5XTY.js.map → cohort-GVAJTICQ.js.map} +0 -0
  797. /package/dist/{condition-H6LBUHIF.js.map → condition-EGPNMM47.js.map} +0 -0
  798. /package/dist/{controls-DWDKFDXY.js.map → controls-HBROSXHF.js.map} +0 -0
  799. /package/dist/{controls.config-KF7PHZSG.js.map → controls.config-FWKV66TU.js.map} +0 -0
  800. /package/dist/{correlation-YMSARIER.js.map → correlation-CEHE66EC.js.map} +0 -0
  801. /package/dist/{customdata.inputui-KEFE7ZHS.js.map → customdata.inputui-LFT3N5FD.js.map} +0 -0
  802. /package/dist/{dataDownload-G7TGPFGL.js.map → dataDownload-ZPAIAAE4.js.map} +0 -0
  803. /package/dist/{databrowser.ui-NFIIFQJZ.js.map → databrowser.ui-W5JGFBE6.js.map} +0 -0
  804. /package/dist/{dictionary-ERJQMALC.js.map → dictionary-RBE2CIZI.js.map} +0 -0
  805. /package/dist/{dnaMethylation-KVCXKAU3.js.map → dnaMethylation-CX22TSRO.js.map} +0 -0
  806. /package/dist/{dnaMethylation.integration.spec-3NXGGG4J.js.map → dnaMethylation.integration.spec-KEE6ZZRT.js.map} +0 -0
  807. /package/dist/{dofetch-YRWLEQEH.js.map → dofetch-6NAGX5EG.js.map} +0 -0
  808. /package/dist/{e2pca-M2F2CI6I.js.map → e2pca-XDGPTEXL.js.map} +0 -0
  809. /package/dist/{ep-QAEG4RV4.js.map → ep-IUIDMIGW.js.map} +0 -0
  810. /package/dist/{expclust.gdc.spec-P77T6JR2.js.map → expclust.gdc.spec-BMN2PTJX.js.map} +0 -0
  811. /package/dist/{facet-LJTSTASE.js.map → facet-DTJKZOBA.js.map} +0 -0
  812. /package/dist/{gb-KSB2DQHH.js.map → gb-MV7MUJWO.js.map} +0 -0
  813. /package/dist/{geneExpClustering-KHDCPE65.js.map → geneExpClustering-NFH5FS3S.js.map} +0 -0
  814. /package/dist/{geneExpression-AWWMOUAR.js.map → geneExpression-XVOLNYVN.js.map} +0 -0
  815. /package/dist/{geneExpression-Z2EDR6EN.js.map → geneExpression-ZP2VWHED.js.map} +0 -0
  816. /package/dist/{geneORA-NGZTMFSJ.js.map → geneORA-HQ7FLMEJ.js.map} +0 -0
  817. /package/dist/{geneRanking-AYNBGFKU.js.map → geneRanking-MIABUKTN.js.map} +0 -0
  818. /package/dist/{geneVariant-AL64NDHH.js.map → geneVariant-HDFWLALZ.js.map} +0 -0
  819. /package/dist/{genefusion.ui-IWJMF2BM.js.map → genefusion.ui-HSDZQHJA.js.map} +0 -0
  820. /package/dist/{geneset-APCO4BRX.js.map → geneset-WKV3X2EJ.js.map} +0 -0
  821. /package/dist/{genomeBrowser.spec-JTCVUTO5.js.map → genomeBrowser.spec-UTAHAU76.js.map} +0 -0
  822. /package/dist/{grin2-FVX6AIST.js.map → grin2-M2JDZVYU.js.map} +0 -0
  823. /package/dist/{hierCluster-4DRHXD6W.js.map → hierCluster-LZI6OTRS.js.map} +0 -0
  824. /package/dist/{hierCluster-SFRQK3PS.js.map → hierCluster-VVXPOTQU.js.map} +0 -0
  825. /package/dist/{hierCluster.config-G2TFGBYF.js.map → hierCluster.config-NCYH3Y7Z.js.map} +0 -0
  826. /package/dist/{hierCluster.integration.spec-ZUZKCG6A.js.map → hierCluster.integration.spec-ZDOOCTV3.js.map} +0 -0
  827. /package/dist/{hierCluster.interactivity-LQA6J56H.js.map → hierCluster.interactivity-4HP3JCON.js.map} +0 -0
  828. /package/dist/{hierCluster.renderers-TZZJEVFO.js.map → hierCluster.renderers-3F5GMEXA.js.map} +0 -0
  829. /package/dist/{imagePlot-OUHFWYKT.js.map → imagePlot-OA4WTMLU.js.map} +0 -0
  830. /package/dist/{importPlot-7V456QK7.js.map → importPlot-OSTC2GPO.js.map} +0 -0
  831. /package/dist/{isoformExpression-NGUJJ6VI.js.map → isoformExpression-LZ5RTUS5.js.map} +0 -0
  832. /package/dist/{isoformExpression.unit.spec-DCRPXPBY.js.map → isoformExpression.unit.spec-L6YDBKYM.js.map} +0 -0
  833. /package/dist/{junction-QYKLNXIW.js.map → junction-UR6COY3A.js.map} +0 -0
  834. /package/dist/{junction.customTerm-EHOOBR4V.js.map → junction.customTerm-TMV43R7Z.js.map} +0 -0
  835. /package/dist/{junction.unit.spec-LDNY7OFK.js.map → junction.unit.spec-NVBJTGA4.js.map} +0 -0
  836. /package/dist/{launch.adhoc-FF7B3UG6.js.map → launch.adhoc-AZG6QJG7.js.map} +0 -0
  837. /package/dist/{leftlabel.sample-BTHMKLGF.js.map → leftlabel.sample-LYZG25RT.js.map} +0 -0
  838. /package/dist/{lollipop-H3UCNMHN.js.map → lollipop-FJXVP5QM.js.map} +0 -0
  839. /package/dist/{maf-KWGUTPKO.js.map → maf-OXJIJD6D.js.map} +0 -0
  840. /package/dist/{maftimeline-UD5VE4UW.js.map → maftimeline-75N6ZXEM.js.map} +0 -0
  841. /package/dist/{matrix-DLCX6GOO.js.map → matrix-QFKGEW5A.js.map} +0 -0
  842. /package/dist/{matrix-TIV42IQB.js.map → matrix-XT7LUV5K.js.map} +0 -0
  843. /package/dist/{matrix.cells-J3QZ7C6U.js.map → matrix.cells-NB7LKKXV.js.map} +0 -0
  844. /package/dist/{matrix.config-VNMS6B7J.js.map → matrix.config-X6HS4UGD.js.map} +0 -0
  845. /package/dist/{matrix.data-PIE3TLKD.js.map → matrix.data-VLFF34SS.js.map} +0 -0
  846. /package/dist/{matrix.groups-URBU775S.js.map → matrix.groups-F62TSKIG.js.map} +0 -0
  847. /package/dist/{matrix.interactivity-W5AFOAQN.js.map → matrix.interactivity-2FBXB52E.js.map} +0 -0
  848. /package/dist/{matrix.layout-LU3NIJAL.js.map → matrix.layout-6TPVKLSX.js.map} +0 -0
  849. /package/dist/{matrix.legend-LTP6ETZO.js.map → matrix.legend-L4ULBMGX.js.map} +0 -0
  850. /package/dist/{matrix.renderers-762XI65L.js.map → matrix.renderers-DK6YRLO2.js.map} +0 -0
  851. /package/dist/{matrix.serieses-FHDBRPZA.js.map → matrix.serieses-DCRJLJ3H.js.map} +0 -0
  852. /package/dist/{matrix.sort-Q6A6UWMY.js.map → matrix.sort-XSGPH44J.js.map} +0 -0
  853. /package/dist/{matrix.sort.unit.spec-CTCOPKVS.js.map → matrix.sort.unit.spec-JF75F4I4.js.map} +0 -0
  854. /package/dist/{matrix.sorterUi-4M5AU5EL.js.map → matrix.sorterUi-WL5I6S3K.js.map} +0 -0
  855. /package/dist/{matrix.sorterUi.unit.spec-Y7GC3PM5.js.map → matrix.sorterUi.unit.spec-66JMV5BK.js.map} +0 -0
  856. /package/dist/{matrix.unit.spec-DROPHFTM.js.map → matrix.unit.spec-36AR4I43.js.map} +0 -0
  857. /package/dist/{mavb-BWA73N3U.js.map → mavb-ZH4RO77H.js.map} +0 -0
  858. /package/dist/{mds.fimo-3UJWIH2J.js.map → mds.fimo-MVP2G5PS.js.map} +0 -0
  859. /package/dist/{mds.samplescatterplot-EUS7DCSQ.js.map → mds.samplescatterplot-GYJ3OI4N.js.map} +0 -0
  860. /package/dist/{mds.survivalplot-77UEBQIC.js.map → mds.survivalplot-Q6MYQGTB.js.map} +0 -0
  861. /package/dist/{multivalue-KZ2DMVIR.js.map → multivalue-BGFMPH4X.js.map} +0 -0
  862. /package/dist/{numericDictTermCluster-C2MYJYPZ.js.map → numericDictTermCluster-FNNVLIWB.js.map} +0 -0
  863. /package/dist/{oncomatrix-6LGB3M7R.js.map → oncomatrix-LIIALWWN.js.map} +0 -0
  864. /package/dist/{oncomatrix.spec-UWMSLOHW.js.map → oncomatrix.spec-NEMLM2ZN.js.map} +0 -0
  865. /package/dist/{plot.2dvaf-LZAVWH65.js.map → plot.2dvaf-HJO3SKNK.js.map} +0 -0
  866. /package/dist/{plot.app-OEWE3AYV.js.map → plot.app-WSLFOFSR.js.map} +0 -0
  867. /package/dist/{plot.barplot-VIBHGTUT.js.map → plot.barplot-SPI5JA37.js.map} +0 -0
  868. /package/dist/{plot.boxplot-NQI3PSKR.js.map → plot.boxplot-4W3XEY5I.js.map} +0 -0
  869. /package/dist/{plot.brainImaging-3MTTCZHI.js.map → plot.brainImaging-KEOUTYIB.js.map} +0 -0
  870. /package/dist/{plot.disco-HODBY7SO.js.map → plot.disco-7IDMKNAQ.js.map} +0 -0
  871. /package/dist/{plot.ssgq-4URQE673.js.map → plot.ssgq-IOKUGDC4.js.map} +0 -0
  872. /package/dist/{plot.vaf2cov-QIJNEKCK.js.map → plot.vaf2cov-SFSZ6M43.js.map} +0 -0
  873. /package/dist/{polar2-GVFQNSLK.js.map → polar2-PLPE5TX5.js.map} +0 -0
  874. /package/dist/{profileForms-Z22CJXI4.js.map → profileForms-ZDHG67GM.js.map} +0 -0
  875. /package/dist/{profilePlot-IVQZBSID.js.map → profilePlot-UUZA2YG6.js.map} +0 -0
  876. /package/dist/{proteinView-AUK634AU.js.map → proteinView-GHS3XARL.js.map} +0 -0
  877. /package/dist/{proteomeCohortCompare-7G2F35H5.js.map → proteomeCohortCompare-TQ3BGIPS.js.map} +0 -0
  878. /package/dist/{pseudobulk-QTCUSH5I.js.map → pseudobulk-ODXYIUD5.js.map} +0 -0
  879. /package/dist/{qualitative-7ST7SSBT.js.map → qualitative-WOSYAIGQ.js.map} +0 -0
  880. /package/dist/{radar2-CEE6SNBS.js.map → radar2-2KXBS3Y3.js.map} +0 -0
  881. /package/dist/{radarFacility2-OSKDYIK7.js.map → radarFacility2-JCOKJQQF.js.map} +0 -0
  882. /package/dist/{rememberedGvQ.unit.spec-RYFUJ2NW.js.map → rememberedGvQ.unit.spec-DYRO2LO5.js.map} +0 -0
  883. /package/dist/{render-MAD3WMVD.js.map → render-IJ6GE3NE.js.map} +0 -0
  884. /package/dist/{report-6JXJVSEB.js.map → report-WLLFUA7L.js.map} +0 -0
  885. /package/dist/{sampleView-SG3QYZKQ.js.map → sampleView-LPKSYUNF.js.map} +0 -0
  886. /package/dist/{samplelst-R765UFP6.js.map → samplelst-MNI2MGMT.js.map} +0 -0
  887. /package/dist/{samplematrix-EBJYE5SM.js.map → samplematrix-KEKJP2B4.js.map} +0 -0
  888. /package/dist/{sc-7ZXPFDHD.js.map → sc-ZYKFRJU4.js.map} +0 -0
  889. /package/dist/{scatter-3GUL4KF3.js.map → scatter-BAEZOFWA.js.map} +0 -0
  890. /package/dist/{selectGenomeWithTklst-K4YXGJYG.js.map → selectGenomeWithTklst-HBHRXEDY.js.map} +0 -0
  891. /package/dist/{singleCellCellType-TU5VTPLP.js.map → singleCellCellType-PMFDV24B.js.map} +0 -0
  892. /package/dist/{singleCellCellType.unit.spec-IRITQIGT.js.map → singleCellCellType.unit.spec-ZLYDUDIY.js.map} +0 -0
  893. /package/dist/{singleCellGeneExpression-3IL52QDK.js.map → singleCellGeneExpression-SUYO3HR3.js.map} +0 -0
  894. /package/dist/{singleCellGeneExpression.unit.spec-WXC4C37T.js.map → singleCellGeneExpression.unit.spec-3N3HRXFN.js.map} +0 -0
  895. /package/dist/{singleCellPlot-XG3HZS7I.js.map → singleCellNumericValue-BV7C6Y34.js.map} +0 -0
  896. /package/dist/{snp-RMZRB426.js.map → singleCellPlot-BG7UJOHA.js.map} +0 -0
  897. /package/dist/{singlecell-BRF2HAV2.js.map → singlecell-BANNFGBS.js.map} +0 -0
  898. /package/dist/{singlecell-KVCJF2HI.js.map → singlecell-ZUTL5ZWE.js.map} +0 -0
  899. /package/dist/{ssGSEA-7RKWYZKX.js.map → snp-BHG4NVK4.js.map} +0 -0
  900. /package/dist/{snp.unit.spec-JF6KR2NT.js.map → snp.unit.spec-Q3AZHQRC.js.map} +0 -0
  901. /package/dist/{snplocus-AHUFHQ3Q.js.map → snplocus-HTJL63M3.js.map} +0 -0
  902. /package/dist/{spliceevent.a53ss.diagram-OSZZ2CF2.js.map → spliceevent.a53ss.diagram-UKRIP7EP.js.map} +0 -0
  903. /package/dist/{spliceevent.exonskip.diagram-AMA2D2OL.js.map → spliceevent.exonskip.diagram-CU777CXQ.js.map} +0 -0
  904. /package/dist/{spliceevent.noeventdiagram-RKTUXH5D.js.map → spliceevent.noeventdiagram-LGLXCF25.js.map} +0 -0
  905. /package/dist/{summarizeMutationDiagnosis-GCL4SRON.js.map → ssGSEA-BIEEKAKX.js.map} +0 -0
  906. /package/dist/{ssGSEA.unit.spec-XLCZHH7S.js.map → ssGSEA.unit.spec-YD4UDIRH.js.map} +0 -0
  907. /package/dist/{stattable-NDYUCLVZ.js.map → stattable-LFR3RSD6.js.map} +0 -0
  908. /package/dist/{studyCatalog-TAXRF5NS.js.map → studyCatalog-RINIZ277.js.map} +0 -0
  909. /package/dist/{summarizeCnvGeneexp-3QLHU6N7.js.map → summarizeCnvGeneexp-ZQFNPR65.js.map} +0 -0
  910. /package/dist/{summarizeGeneexpSurvival-ARI4MPFX.js.map → summarizeGeneexpSurvival-GIS7XMMH.js.map} +0 -0
  911. /package/dist/{summarizeMutationCnv-W7V7CKPI.js.map → summarizeMutationCnv-FWF7YIGR.js.map} +0 -0
  912. /package/dist/{summary-OUYDWLBF.js.map → summarizeMutationDiagnosis-V5L2OKTK.js.map} +0 -0
  913. /package/dist/{summarizeMutationSurvival-6TTMSRRX.js.map → summarizeMutationSurvival-LAUUF6XN.js.map} +0 -0
  914. /package/dist/{termCollection-7P3WU6X6.js.map → summary-OMU3ACNE.js.map} +0 -0
  915. /package/dist/{summary.integration.spec-4GTCG6HY.js.map → summary.integration.spec-6JZAT73L.js.map} +0 -0
  916. /package/dist/{summaryInput-UK3TLC7M.js.map → summaryInput-QIKL3HDD.js.map} +0 -0
  917. /package/dist/{sunburst-2UFHMNH3.js.map → sunburst-32IW2R57.js.map} +0 -0
  918. /package/dist/{survival-SPWYSDVB.js.map → survival-BMOPVAN2.js.map} +0 -0
  919. /package/dist/{survival-TL6UZ6FQ.js.map → survival-H5AWMQ36.js.map} +0 -0
  920. /package/dist/{svgraph-Z543MLIN.js.map → svgraph-B75FS3BB.js.map} +0 -0
  921. /package/dist/{svmr-SZCAOAIF.js.map → svmr-IUEUOHVO.js.map} +0 -0
  922. /package/dist/{table-IAQ6J4DO.js.map → table-YAAH7WR6.js.map} +0 -0
  923. /package/dist/{termCollection-3NGHR7QN.js.map → termCollection-7F5ZG2DB.js.map} +0 -0
  924. /package/dist/{termCollectionFractionSelection-YKIE6BME.js.map → termCollection-KNFUELYY.js.map} +0 -0
  925. /package/dist/{termCollection.unit.spec-EPYC7LOA.js.map → termCollection.unit.spec-S6M6QC4C.js.map} +0 -0
  926. /package/dist/{tk-X454XH5N.js.map → termCollectionFractionSelection-X22VMJWY.js.map} +0 -0
  927. /package/dist/{termCollectionFractionSelection.unit.spec-AG2CZPGZ.js.map → termCollectionFractionSelection.unit.spec-ELU6SD7P.js.map} +0 -0
  928. /package/dist/{tvs.dt-U77PCG6X.js.map → tk-TT666UVE.js.map} +0 -0
  929. /package/dist/{tk-TOXMU4GT.js.map → tk-UOPNJ323.js.map} +0 -0
  930. /package/dist/{tp.ui-FDQ76KPL.js.map → tp.ui-HGAHRKO5.js.map} +0 -0
  931. /package/dist/{vocabulary-64GO4YDB.js.map → tvs.dt-H7YYR4EB.js.map} +0 -0
  932. /package/dist/{tvs.dtcnv.categorical-XYZU4XLO.js.map → tvs.dtcnv.categorical-IPJTKGMF.js.map} +0 -0
  933. /package/dist/{tvs.dtcnv.continuous-4GJILFGP.js.map → tvs.dtcnv.continuous-XY5XZ4GH.js.map} +0 -0
  934. /package/dist/{tvs.dtfusion-7YROAHVI.js.map → tvs.dtfusion-VFCBMXRM.js.map} +0 -0
  935. /package/dist/{tvs.dtitd-MIYU4ZHH.js.map → tvs.dtitd-RZVW6FTR.js.map} +0 -0
  936. /package/dist/{tvs.dtsnvindel-XLDY7KWB.js.map → tvs.dtsnvindel-IDPJWSGC.js.map} +0 -0
  937. /package/dist/{tvs.dtsv-YMLJ37YR.js.map → tvs.dtsv-QERP756F.js.map} +0 -0
  938. /package/dist/{tvs.samplelst-KIVEXJKD.js.map → tvs.samplelst-6KNDHBIU.js.map} +0 -0
  939. /package/dist/{tvs.termCollection-4CQV3EB3.js.map → tvs.termCollection-GWPJK3NE.js.map} +0 -0
  940. /package/dist/{wsi.direct-5MQVRJZX.js.map → wsi.direct-2RBCBXDA.js.map} +0 -0
@@ -1,587 +0,0 @@
1
- import {
2
- axisstyle,
3
- bulk_badline,
4
- disappear2 as disappear,
5
- make_table_2col,
6
- newpane,
7
- newpane3,
8
- renderSandboxFormDiv,
9
- to_svg
10
- } from "./chunk-PC4MFDHP.js";
11
- import "./chunk-HJ6L54YS.js";
12
- import "./chunk-KV4W2ACA.js";
13
- import "./chunk-HPAW7XDM.js";
14
- import {
15
- Menu
16
- } from "./chunk-ELJX3QIQ.js";
17
- import "./chunk-BZN2O76M.js";
18
- import "./chunk-EEB5VE2A.js";
19
- import "./chunk-6RRZRISL.js";
20
- import "./chunk-2KM4PRQM.js";
21
- import "./chunk-52QHIKH2.js";
22
- import "./chunk-A2ORIMUJ.js";
23
- import "./chunk-PPSWNLMG.js";
24
- import "./chunk-RUBZCKIX.js";
25
- import "./chunk-WINIL2KN.js";
26
- import "./chunk-PF4DSFDR.js";
27
- import "./chunk-7X6NF7NI.js";
28
- import "./chunk-W5J3LTYS.js";
29
- import {
30
- axisBottom,
31
- axisLeft,
32
- category10_default
33
- } from "./chunk-Z2ZITHT4.js";
34
- import {
35
- format,
36
- linear,
37
- log,
38
- ordinal,
39
- time,
40
- timeParse
41
- } from "./chunk-4OLM3KSB.js";
42
- import "./chunk-FXQXCOII.js";
43
- import "./chunk-TLT4YIG3.js";
44
- import "./chunk-5R63Q5KH.js";
45
- import {
46
- select_default
47
- } from "./chunk-I6Y4O3RR.js";
48
- import "./chunk-Q5RDQNIT.js";
49
- import "./chunk-DQC5FFGV.js";
50
- import "./chunk-HS5PO5ZQ.js";
51
-
52
- // src/maftimeline.js
53
- var zerovalue = 1e-5;
54
- var showcircle = true;
55
- var maflogscale = true;
56
- var tip = new Menu();
57
- function maftimelineui(genomes, holder, sandbox_header) {
58
- let pane, inputdiv, gselect, filediv, saydiv, visualdiv;
59
- if (holder !== void 0) [inputdiv, gselect, filediv, saydiv, visualdiv] = renderSandboxFormDiv(holder, genomes);
60
- else {
61
- ;
62
- [pane, inputdiv, gselect, filediv, saydiv, visualdiv] = newpane3(100, 100, genomes);
63
- pane.header.text("MAF timeline plot");
64
- }
65
- inputdiv.append("p").html(
66
- "<a href=https://docs.google.com/document/d/1WXlCVHLq_P2jGiRGJ55uzXCC6p-6Jqn7h406RUID_xo/edit?usp=sharing target=_blank>File format</a>"
67
- );
68
- inputdiv.append("p").html("<a href=https://www.dropbox.com/s/940wfo6rd1ttlim/example.maftimeline?dl=0 target=_blank>Example file</a>");
69
- {
70
- const id = Math.random().toString();
71
- const p = inputdiv.append("p");
72
- p.append("input").attr("type", "checkbox").attr("id", id).property("checked", true).style("margin-right", "5px").on("change", () => {
73
- maflogscale = !maflogscale;
74
- });
75
- p.append("label").attr("for", id).text("Y axis (MAF) log10 scale");
76
- }
77
- const fileui = () => {
78
- filediv.selectAll("*").remove();
79
- const butt = filediv.append("input").attr("type", "file").on("change", (event) => {
80
- saydiv.text("");
81
- const file = event.target.files[0];
82
- if (!file) {
83
- fileui();
84
- return;
85
- }
86
- if (file.size == 0) {
87
- saydiv.text("Wrong file: " + file.name);
88
- fileui();
89
- return;
90
- }
91
- const reader = new FileReader();
92
- reader.onload = (event2) => {
93
- const lines = event2.target.result.trim().split(/\r?\n/);
94
- const [err, header] = parseheader(lines[0].trim());
95
- if (err) {
96
- saydiv.text("File header error: " + err);
97
- fileui();
98
- return;
99
- }
100
- const badlines = [];
101
- const data = {};
102
- let good = 0;
103
- for (let i = 1; i < lines.length; i++) {
104
- if (lines[i] == "") continue;
105
- if (lines[i][0] == "#") continue;
106
- const m = parseline(i, lines[i], header, badlines, data);
107
- if (m) {
108
- good++;
109
- }
110
- }
111
- if (badlines.length) {
112
- bulk_badline(header, badlines);
113
- }
114
- if (good == 0) {
115
- fileui();
116
- return;
117
- }
118
- let visual_holder;
119
- if (pane) {
120
- disappear(pane.pane);
121
- const pane2 = newpane({ x: 100, y: 100, toshrink: true });
122
- pane2.header.html('<span style="opacity:.5;font-size:.7em">MAF TIMELINE</span> ' + file.name);
123
- visual_holder = pane2.body;
124
- }
125
- if (holder !== void 0) {
126
- visual_holder = visualdiv.html('<span style="opacity:.5;font-size:.7em">MAF TIMELINE</span> ' + file.name);
127
- inputdiv.selectAll("*").remove();
128
- saydiv.text("");
129
- }
130
- render(data, header, visual_holder);
131
- };
132
- reader.onerror = function() {
133
- saydiv.text("Error reading file " + file.name);
134
- fileui();
135
- return;
136
- };
137
- saydiv.text("Parsing file " + file.name + " ...");
138
- reader.readAsText(file, "utf8");
139
- });
140
- setTimeout(() => butt.node().focus(), 1100);
141
- };
142
- fileui();
143
- }
144
- function parseheader(line) {
145
- const header = line.toLowerCase().split(" ");
146
- if (header.length <= 1) return ["columns must be separated by tab"];
147
- const htry = (...lst) => {
148
- for (const i2 of lst) {
149
- const j = header.indexOf(i2);
150
- if (j != -1) return j;
151
- }
152
- return -1;
153
- };
154
- let i = htry("person", "patient", "caseid");
155
- if (i == -1) return ["person missing"];
156
- header[i] = "patient";
157
- i = htry("sample", "sampleid");
158
- if (i == -1) return ["sample missing"];
159
- header[i] = "sample";
160
- i = htry("snv4");
161
- if (i == -1) return ["snv4 missing"];
162
- header[i] = "snv4";
163
- i = htry("date", "dateofsample");
164
- if (i == -1) return ["date missing"];
165
- header[i] = "date";
166
- i = htry("mutant_readcount", "mutantcount");
167
- if (i != -1) header[i] = "mutant_readcount";
168
- i = htry("ref_readcount", "refcount");
169
- if (i != -1) header[i] = "ref_readcount";
170
- i = htry("total_readcount", "coveragecount");
171
- if (i == -1) return ["total_readcount missing"];
172
- header[i] = "coverage";
173
- i = htry("maf");
174
- if (i == -1) return ["maf missing"];
175
- header[i] = "maf";
176
- i = htry("call_manual");
177
- if (i != -1) header[i] = "call_manual";
178
- return [null, header];
179
- }
180
- function parseline(i, line, header, badlines, data) {
181
- const lst = line.split(" ");
182
- const m = {};
183
- for (let j = 0; j < header.length; j++) {
184
- m[header[j]] = lst[j];
185
- }
186
- if (!m.patient) {
187
- badlines.push([i, "missing patient", lst]);
188
- return;
189
- }
190
- if (!data[m.patient]) {
191
- data[m.patient] = {
192
- snv4: {},
193
- show: false
194
- };
195
- }
196
- if (!m.snv4) {
197
- badlines.push([i, "missing snv4", lst]);
198
- return;
199
- }
200
- if (!data[m.patient].snv4[m.snv4]) {
201
- data[m.patient].snv4[m.snv4] = {
202
- mutationname: m.snv4,
203
- samples: [],
204
- subidx: void 0
205
- };
206
- }
207
- if (m.gene) {
208
- data[m.patient].snv4[m.snv4].gene = m.gene;
209
- }
210
- if (!m.maf) {
211
- badlines.push([i, "missing maf", lst]);
212
- return;
213
- }
214
- let v = Number.parseFloat(m.maf);
215
- if (Number.isNaN(v)) {
216
- badlines.push([i, "invalid maf", lst]);
217
- return;
218
- }
219
- if (v < zerovalue) {
220
- v = zerovalue;
221
- }
222
- m.maf = v;
223
- if (!m.coverage) {
224
- badlines.push([i, "missing total_readcount", lst]);
225
- return;
226
- }
227
- if (m.call_manual && m.call_manual == "wildtype") {
228
- m.maf = zerovalue;
229
- }
230
- v = Number.parseInt(m.coverage);
231
- if (Number.isNaN(v)) {
232
- badlines.push([i, "invalid total_readcount", lst]);
233
- return;
234
- }
235
- m.coverage = v;
236
- let date;
237
- if (m.date) {
238
- const f = timeParse("%m/%d/%Y");
239
- date = f(m.date);
240
- m.Date = m.date;
241
- } else {
242
- badlines.push([i, "missing date", lst]);
243
- return;
244
- }
245
- if (date == null) {
246
- badlines.push([i, "cannot parse date", lst]);
247
- return;
248
- }
249
- m.date = date;
250
- if (!m.sample) {
251
- badlines.push([i, "missing sample", lst]);
252
- return;
253
- }
254
- data[m.patient].snv4[m.snv4].samples.push(m);
255
- return true;
256
- }
257
- function render(data, header, holder) {
258
- const table = holder.append("table").style("margin", "20px");
259
- const tr1 = table.append("tr");
260
- let td = tr1.append("td").style("vertical-align", "top").attr("rowspan", 2);
261
- td.append("button").text("Toggle circle visibility").on("click", () => {
262
- showcircle = !showcircle;
263
- for (const n in data) {
264
- if (data[n].show) {
265
- data[n].handle.node().click();
266
- break;
267
- }
268
- }
269
- });
270
- const patientholder = td.append("div").style("margin-top", "10px");
271
- const td1 = tr1.append("td").style("vertical-align", "top");
272
- const graphholder = td1.append("div").style("display", "inline-block");
273
- const controlholder = td1.append("div").style("display", "inline-block").style("vertical-align", "top");
274
- const tr2 = table.append("tr");
275
- const tiantable = tr2.append("td").append("table").style("border-spacing", "20px").style("border-collapse", "separate");
276
- const gtr1 = tiantable.append("tr");
277
- td = gtr1.append("td").style("vertical-align", "top");
278
- td.append("div").text("Shared").style("font-size", "2em");
279
- const graph1holder = td.append("div").style("border", "solid 1px black");
280
- td = gtr1.append("td").style("vertical-align", "top");
281
- td.append("div").text("Rising").style("font-size", "2em");
282
- const graph2holder = td.append("div").style("border", "solid 1px black");
283
- const gtr2 = tiantable.append("tr");
284
- td = gtr2.append("td").style("vertical-align", "top");
285
- td.append("div").text("Falling").style("font-size", "2em");
286
- const graph3holder = td.append("div").style("border", "solid 1px black");
287
- td = gtr2.append("td").style("vertical-align", "top");
288
- td.append("div").text("R-only").style("font-size", "2em");
289
- const graph4holder = td.append("div").style("border", "solid 1px black");
290
- for (const patient in data) {
291
- const snvlst = [];
292
- const colors = ordinal(category10_default);
293
- for (const x in data[patient].snv4) {
294
- const snv = data[patient].snv4[x];
295
- snv.show = true;
296
- snv.color = colors(snv.mutationname);
297
- snv.samples.sort((a, b) => a.date - b.date);
298
- for (const s of snv.samples) {
299
- s.color = snv.color;
300
- }
301
- snvlst.push(snv);
302
- }
303
- const div = patientholder.append("div").classed("sja_menuoption", true).style("color", "black").text(patient).on("click", () => {
304
- for (const pn in data) {
305
- data[pn].handle.style("color", "black");
306
- data[pn].show = false;
307
- }
308
- data[patient].handle.style("color", "red");
309
- data[patient].show = true;
310
- makegraph(snvlst, header, graphholder);
311
- makesubgraph(snvlst, graph1holder, graph2holder, graph3holder, graph4holder);
312
- makecontrol(snvlst, header, controlholder, graphholder, graph1holder, graph2holder, graph3holder, graph4holder);
313
- });
314
- data[patient].handle = div;
315
- }
316
- for (const n in data) {
317
- data[n].handle.node().click();
318
- break;
319
- }
320
- }
321
- function makesubgraph(snvlst, g1, g2, g3, g4) {
322
- g1.selectAll("*").remove();
323
- g2.selectAll("*").remove();
324
- g3.selectAll("*").remove();
325
- g4.selectAll("*").remove();
326
- const l1 = [];
327
- const l2 = [];
328
- const l3 = [];
329
- const l4 = [];
330
- for (const snv of snvlst) {
331
- switch (snv.subidx) {
332
- case 1:
333
- l1.push(snv);
334
- break;
335
- case 2:
336
- l2.push(snv);
337
- break;
338
- case 3:
339
- l3.push(snv);
340
- break;
341
- case 4:
342
- l4.push(snv);
343
- break;
344
- }
345
- }
346
- if (l1.length) {
347
- makegraph(l1, null, g1, true);
348
- } else {
349
- g1.append("div").style("padding", "60px").style("background-color", "#ededed").text("no data");
350
- }
351
- if (l2.length) {
352
- makegraph(l2, null, g2, true);
353
- } else {
354
- g2.append("div").style("padding", "60px").style("background-color", "#ededed").text("no data");
355
- }
356
- if (l3.length) {
357
- makegraph(l3, null, g3, true);
358
- } else {
359
- g3.append("div").style("padding", "60px").style("background-color", "#ededed").text("no data");
360
- }
361
- if (l4.length) {
362
- makegraph(l4, null, g4, true);
363
- } else {
364
- g4.append("div").style("padding", "60px").style("background-color", "#ededed").text("no data");
365
- }
366
- }
367
- function makegraph(snvlst0, header, holder, issub) {
368
- holder.selectAll("*").remove();
369
- const samples = [];
370
- const snvlst = [];
371
- for (const snv of snvlst0) {
372
- if (!issub && !snv.show) continue;
373
- snvlst.push(snv);
374
- for (const s of snv.samples) {
375
- samples.push(s);
376
- }
377
- }
378
- if (snvlst.length == 0) return;
379
- let mindate = snvlst[0].samples[0].date;
380
- let maxdate = snvlst[0].samples[0].date;
381
- let maxmaf = snvlst[0].samples[0].maf;
382
- let maxcoverage = snvlst[0].samples[0].coverage;
383
- for (const snv of snvlst) {
384
- for (const s of snv.samples) {
385
- mindate = Math.min(mindate, s.date);
386
- maxdate = Math.max(maxdate, s.date);
387
- maxmaf = Math.max(maxmaf, s.maf);
388
- maxcoverage = Math.max(maxcoverage, s.coverage);
389
- }
390
- }
391
- const svg = holder.append("svg");
392
- const toppad = 30, rightpad = 200, yaxisw = 100, xaxish = 50;
393
- let width = 600;
394
- let height = 400;
395
- let xpad, ypad, minradius;
396
- const xaxisg = svg.append("g");
397
- const yaxisg = svg.append("g");
398
- const drag = svg.append("text").text("drag to resize").attr("class", "sja_clb").attr("text-anchor", "end").on("mousedown", (event) => {
399
- event.preventDefault();
400
- const x = event.clientX;
401
- const y = event.clientY;
402
- const w0 = width;
403
- const h0 = height;
404
- const body = select_default(document.body);
405
- body.on("mousemove", (event2) => {
406
- setsize(w0 + event2.clientX - x, h0 + event2.clientY - y);
407
- }).on("mouseup", () => {
408
- body.on("mousemove", null).on("mouseup", null);
409
- });
410
- });
411
- const xscale = time().domain([mindate, maxdate]);
412
- const yscale = (maflogscale ? log() : linear()).domain([zerovalue, 1]);
413
- const rscale = linear().domain([1, maxcoverage]);
414
- const g = svg.append("g");
415
- const lines = g.selectAll().data(snvlst).enter().append("path").attr("stroke", (d) => d.color).attr("fill", "none");
416
- let circles;
417
- if (showcircle) {
418
- circles = g.selectAll().data(samples).enter().append("circle").attr("fill", (d) => d.color).attr("fill-opacity", 0.1).on("mouseover", (event, d) => {
419
- event.target.setAttribute("fill-opacity", 0.4);
420
- tip.clear();
421
- tip.show(event.clientX, event.clientY);
422
- const lst = [];
423
- for (const k in d) {
424
- if (k == "color") continue;
425
- if (k == "gene") {
426
- lst.push({ k: "gene", v: '<span style="color:' + d.color + '">' + d.gene + "</span>" });
427
- continue;
428
- }
429
- if (k == "date") continue;
430
- if (k == "url") {
431
- lst.push({ k: "URL", v: "<a href=" + d.url + " target=_blank>LINK</a>" });
432
- continue;
433
- }
434
- lst.push({ k, v: d[k] });
435
- }
436
- make_table_2col(tip.d, lst);
437
- }).on("mouseout", (event) => {
438
- event.target.setAttribute("fill-opacity", 0.1);
439
- });
440
- }
441
- const legend = svg.append("g");
442
- const setsize = (w, h) => {
443
- width = w;
444
- height = h;
445
- minradius = 2;
446
- const maxradius = Math.max(width, height) / 30;
447
- xpad = maxradius;
448
- ypad = maxradius;
449
- rscale.range([Math.pow(minradius, 2), Math.pow(maxradius, 2)]);
450
- xscale.range([0, width]);
451
- yscale.range([height, 0]);
452
- svg.attr("width", yaxisw + xpad + width + rightpad).attr("height", toppad + height + ypad + xaxish);
453
- xaxisg.attr("transform", "translate(" + (yaxisw + xpad) + "," + (toppad + height + ypad) + ")");
454
- yaxisg.attr("transform", "translate(" + yaxisw + "," + toppad + ")");
455
- drag.attr("x", yaxisw + xpad + width).attr("y", toppad + height + ypad + xaxish - 4);
456
- axisstyle({
457
- axis: xaxisg.call(axisBottom().scale(xscale)),
458
- showline: true,
459
- color: "black",
460
- fontsize: Math.max(12, Math.min(20, width / 100))
461
- });
462
- axisstyle({
463
- axis: yaxisg.call(
464
- axisLeft().scale(yscale).tickValues([1, 0.1, 0.01, 1e-3, 1e-4, zerovalue]).tickFormat(format(" "))
465
- ),
466
- showline: true,
467
- color: "black",
468
- fontsize: Math.max(12, Math.min(20, height / 100))
469
- });
470
- g.attr("transform", "translate(" + (yaxisw + xpad) + "," + toppad + ")");
471
- lines.attr("d", (d) => {
472
- const lst = [];
473
- for (let i = 0; i < d.samples.length; i++) {
474
- const s = d.samples[i];
475
- lst.push((i == 0 ? "M" : "L") + " " + xscale(s.date) + " " + yscale(s.maf));
476
- }
477
- return lst.join(" ");
478
- });
479
- if (showcircle) {
480
- circles.attr("cx", (d) => xscale(d.date)).attr("cy", (d) => yscale(d.maf)).attr("r", (d) => Math.sqrt(rscale(d.coverage)));
481
- }
482
- legend.attr("transform", "translate(" + (yaxisw + xpad + width + maxradius + 5) + "," + toppad + ")");
483
- legend.selectAll("*").remove();
484
- let y = minradius;
485
- if (showcircle) {
486
- legend.append("circle").attr("r", minradius).attr("cx", minradius).attr("cy", y).attr("fill", "#ccc");
487
- legend.append("text").text(1).attr("x", minradius * 2 + 10).attr("y", y).attr("font-size", 10).attr("dominant-baseline", "central");
488
- y += 5 + minradius + maxradius;
489
- legend.append("circle").attr("r", maxradius).attr("cx", maxradius).attr("cy", y).attr("fill", "#ccc");
490
- legend.append("text").text(maxcoverage).attr("x", maxradius * 2 + 10).attr("y", y).attr("font-size", 15).attr("dominant-baseline", "central");
491
- y += 15 + maxradius;
492
- }
493
- const fontsize = 12;
494
- for (const snv of snvlst) {
495
- legend.append("line").attr("x2", 30).attr("y1", y).attr("y2", y).attr("stroke", snv.color);
496
- if (showcircle) {
497
- legend.append("circle").attr("cx", 15).attr("cy", y).attr("r", 8).attr("fill", snv.color).attr("fill-opacity", 0.1);
498
- }
499
- legend.append("text").text(snv.gene).attr("dominant-baseline", "central").attr("font-size", fontsize).attr("x", 30 + 10).attr("y", y).attr("fill", snv.color).style("cursor", "default").on("mouseover", (event) => {
500
- event.target.setAttribute("font-weight", "bold");
501
- lines.filter((d) => d.mutationname == snv.mutationname).attr("stroke-width", 3);
502
- }).on("mouseout", (event) => {
503
- event.target.setAttribute("font-weight", "normal");
504
- lines.filter((d) => d.mutationname == snv.mutationname).attr("stroke-width", 1);
505
- });
506
- y += fontsize + 10;
507
- }
508
- };
509
- setsize(width, height);
510
- holder.append("div").style("text-align", "right").append("button").text("SVG").on("click", () => {
511
- to_svg(svg.node(), "maf-timeline");
512
- });
513
- }
514
- function makecontrol(snvlst, header, holder, graphholder, g1, g2, g3, g4) {
515
- holder.selectAll("*").remove();
516
- const table = holder.append("table");
517
- for (const snv of snvlst) {
518
- const tr = table.append("tr");
519
- const td1 = tr.append("td");
520
- td1.text(snv.gene).style("color", snv.color);
521
- const td2 = tr.append("td");
522
- const checkbox = td2.append("input").attr("type", "checkbox").style("zoom", "150%").property("checked", snv.show);
523
- snv.checkbox = checkbox;
524
- checkbox.on("change", (event) => {
525
- snv.show = event.target.checked;
526
- makegraph(snvlst, header, graphholder);
527
- });
528
- const butt = td2.append("button").style("margin-left", "5px").text("Only").on("click", () => {
529
- for (const s2 of snvlst) {
530
- s2.show = false;
531
- s2.checkbox.property("checked", false);
532
- }
533
- snv.show = true;
534
- snv.checkbox.property("checked", true);
535
- makegraph(snvlst, header, graphholder);
536
- });
537
- let cname = Math.random();
538
- const td11 = tr.append("td");
539
- const c1 = td11.append("input").attr("type", "checkbox").attr("id", cname).on("change", (event) => cchange(1, event.target));
540
- td11.append("label").html("&nbsp;shared").attr("for", cname);
541
- cname = Math.random();
542
- const td22 = tr.append("td");
543
- const c2 = td22.append("input").attr("type", "checkbox").attr("id", cname).on("change", (event) => cchange(2, event.target));
544
- td22.append("label").html("&nbsp;rising").attr("for", cname);
545
- cname = Math.random();
546
- const td33 = tr.append("td");
547
- const c3 = td33.append("input").attr("type", "checkbox").attr("id", cname).on("change", (event) => cchange(3, event.target));
548
- td33.append("label").html("&nbsp;falling").attr("for", cname);
549
- cname = Math.random();
550
- const td44 = tr.append("td");
551
- const c4 = td44.append("input").attr("type", "checkbox").attr("id", cname).on("change", (event) => cchange(4, event.target));
552
- td44.append("label").html("&nbsp;R-only").attr("for", cname);
553
- if (snv.subidx == 1) c1.property("checked", true);
554
- if (snv.subidx == 2) c2.property("checked", true);
555
- if (snv.subidx == 3) c3.property("checked", true);
556
- if (snv.subidx == 4) c4.property("checked", true);
557
- const cchange = (which, check) => {
558
- if (!check.checked) {
559
- snv.subidx = -1;
560
- } else {
561
- snv.subidx = which;
562
- if (which == 1) {
563
- c2.property("checked", false);
564
- c3.property("checked", false);
565
- c4.property("checked", false);
566
- } else if (which == 2) {
567
- c1.property("checked", false);
568
- c3.property("checked", false);
569
- c4.property("checked", false);
570
- } else if (which == 3) {
571
- c1.property("checked", false);
572
- c2.property("checked", false);
573
- c4.property("checked", false);
574
- } else {
575
- c1.property("checked", false);
576
- c2.property("checked", false);
577
- c3.property("checked", false);
578
- }
579
- }
580
- makesubgraph(snvlst, g1, g2, g3, g4);
581
- };
582
- }
583
- }
584
- export {
585
- maftimelineui as default
586
- };
587
- //# sourceMappingURL=maftimeline-UD5VE4UW.js.map
@@ -1,59 +0,0 @@
1
- import {
2
- Matrix,
3
- componentInit,
4
- makeChartBtnMenu,
5
- matrixInit
6
- } from "./chunk-UYKZ5HXA.js";
7
- import "./chunk-YKM46UX5.js";
8
- import "./chunk-GVLWCGXX.js";
9
- import "./chunk-FKA55PHV.js";
10
- import {
11
- getPlotConfig,
12
- setComputedConfig
13
- } from "./chunk-SU63FEY6.js";
14
- import "./chunk-4KJSNR5E.js";
15
- import "./chunk-67URJYN7.js";
16
- import "./chunk-JZHRVYNS.js";
17
- import "./chunk-BCO5T43J.js";
18
- import "./chunk-C2MCQZWH.js";
19
- import "./chunk-DDKS3MV3.js";
20
- import "./chunk-7AHTS4BP.js";
21
- import "./chunk-36AAUYZE.js";
22
- import "./chunk-HLVWCJRO.js";
23
- import "./chunk-RBSAEAQV.js";
24
- import "./chunk-V2OJLJSK.js";
25
- import "./chunk-PC4MFDHP.js";
26
- import "./chunk-HJ6L54YS.js";
27
- import "./chunk-KV4W2ACA.js";
28
- import "./chunk-HPAW7XDM.js";
29
- import "./chunk-ELJX3QIQ.js";
30
- import "./chunk-BZN2O76M.js";
31
- import "./chunk-EEB5VE2A.js";
32
- import "./chunk-6RRZRISL.js";
33
- import "./chunk-2KM4PRQM.js";
34
- import "./chunk-52QHIKH2.js";
35
- import "./chunk-A2ORIMUJ.js";
36
- import "./chunk-PPSWNLMG.js";
37
- import "./chunk-RUBZCKIX.js";
38
- import "./chunk-WINIL2KN.js";
39
- import "./chunk-PF4DSFDR.js";
40
- import "./chunk-7X6NF7NI.js";
41
- import "./chunk-W5J3LTYS.js";
42
- import "./chunk-Z2ZITHT4.js";
43
- import "./chunk-4OLM3KSB.js";
44
- import "./chunk-FXQXCOII.js";
45
- import "./chunk-TLT4YIG3.js";
46
- import "./chunk-5R63Q5KH.js";
47
- import "./chunk-I6Y4O3RR.js";
48
- import "./chunk-Q5RDQNIT.js";
49
- import "./chunk-DQC5FFGV.js";
50
- import "./chunk-HS5PO5ZQ.js";
51
- export {
52
- Matrix,
53
- componentInit,
54
- getPlotConfig,
55
- makeChartBtnMenu,
56
- matrixInit,
57
- setComputedConfig
58
- };
59
- //# sourceMappingURL=matrix-DLCX6GOO.js.map
@@ -1,54 +0,0 @@
1
- import {
2
- Matrix,
3
- componentInit,
4
- makeChartBtnMenu,
5
- matrixInit
6
- } from "./chunk-UYKZ5HXA.js";
7
- import "./chunk-YKM46UX5.js";
8
- import "./chunk-GVLWCGXX.js";
9
- import "./chunk-FKA55PHV.js";
10
- import "./chunk-SU63FEY6.js";
11
- import "./chunk-4KJSNR5E.js";
12
- import "./chunk-67URJYN7.js";
13
- import "./chunk-JZHRVYNS.js";
14
- import "./chunk-BCO5T43J.js";
15
- import "./chunk-C2MCQZWH.js";
16
- import "./chunk-DDKS3MV3.js";
17
- import "./chunk-7AHTS4BP.js";
18
- import "./chunk-36AAUYZE.js";
19
- import "./chunk-HLVWCJRO.js";
20
- import "./chunk-RBSAEAQV.js";
21
- import "./chunk-V2OJLJSK.js";
22
- import "./chunk-PC4MFDHP.js";
23
- import "./chunk-HJ6L54YS.js";
24
- import "./chunk-KV4W2ACA.js";
25
- import "./chunk-HPAW7XDM.js";
26
- import "./chunk-ELJX3QIQ.js";
27
- import "./chunk-BZN2O76M.js";
28
- import "./chunk-EEB5VE2A.js";
29
- import "./chunk-6RRZRISL.js";
30
- import "./chunk-2KM4PRQM.js";
31
- import "./chunk-52QHIKH2.js";
32
- import "./chunk-A2ORIMUJ.js";
33
- import "./chunk-PPSWNLMG.js";
34
- import "./chunk-RUBZCKIX.js";
35
- import "./chunk-WINIL2KN.js";
36
- import "./chunk-PF4DSFDR.js";
37
- import "./chunk-7X6NF7NI.js";
38
- import "./chunk-W5J3LTYS.js";
39
- import "./chunk-Z2ZITHT4.js";
40
- import "./chunk-4OLM3KSB.js";
41
- import "./chunk-FXQXCOII.js";
42
- import "./chunk-TLT4YIG3.js";
43
- import "./chunk-5R63Q5KH.js";
44
- import "./chunk-I6Y4O3RR.js";
45
- import "./chunk-Q5RDQNIT.js";
46
- import "./chunk-DQC5FFGV.js";
47
- import "./chunk-HS5PO5ZQ.js";
48
- export {
49
- Matrix,
50
- componentInit,
51
- makeChartBtnMenu,
52
- matrixInit
53
- };
54
- //# sourceMappingURL=matrix-TIV42IQB.js.map