@sjcrh/proteinpaint-client 2.207.1 → 2.209.0

package/dist/singleCellNumericValue.unit.spec-7VJOMYQ6.js

@@ -0,0 +1,416 @@
+import {
+  SearchHandler
+} from "./chunk-Q4HTEL2O.js";
+import {
+  require_tape
+} from "./chunk-PJYCTAMC.js";
+import "./chunk-C3HEDQPT.js";
+import "./chunk-HJ6L54YS.js";
+import "./chunk-KV4W2ACA.js";
+import "./chunk-B6UXFX73.js";
+import "./chunk-ELJX3QIQ.js";
+import "./chunk-3FEP6B5T.js";
+import "./chunk-EEB5VE2A.js";
+import "./chunk-6RRZRISL.js";
+import "./chunk-2KM4PRQM.js";
+import "./chunk-OBDIJ4QS.js";
+import "./chunk-6FG6JFZP.js";
+import "./chunk-3XBG5HIV.js";
+import {
+  TermTypeGroups
+} from "./chunk-SB36AUG7.js";
+import "./chunk-WINIL2KN.js";
+import "./chunk-PF4DSFDR.js";
+import "./chunk-7X6NF7NI.js";
+import "./chunk-W5J3LTYS.js";
+import "./chunk-Z2ZITHT4.js";
+import "./chunk-4OLM3KSB.js";
+import "./chunk-FXQXCOII.js";
+import "./chunk-TLT4YIG3.js";
+import "./chunk-5R63Q5KH.js";
+import {
+  select_default
+} from "./chunk-I6Y4O3RR.js";
+import "./chunk-Q5RDQNIT.js";
+import "./chunk-DQC5FFGV.js";
+import {
+  __toESM
+} from "./chunk-HS5PO5ZQ.js";
+
+// termdb/handlers/test/singleCellNumericValue.unit.spec.ts
+var import_tape = __toESM(require_tape(), 1);
+function getHolder() {
+  return select_default("body").append("div");
+}
+function createMockApp(termType2terms = []) {
+  return {
+    vocabApi: {
+      termdbConfig: {
+        termType2terms: {
+          [TermTypeGroups.SINGLECELL_NUMERIC_VALUE]: termType2terms
+        }
+      }
+    }
+  };
+}
+function createMockUsecase(config = {}) {
+  return {
+    specialCase: {
+      config
+    }
+  };
+}
+function createMockTerm(overrides = {}) {
+  return {
+    name: "test_term",
+    plot: "UMAP",
+    sample: void 0,
+    ...overrides
+  };
+}
+function createValidOpts(overrides = {}) {
+  return {
+    callback: () => {
+    },
+    app: createMockApp(),
+    holder: getHolder(),
+    usecase: createMockUsecase(),
+    ...overrides
+  };
+}
+(0, import_tape.default)("\n", function(test) {
+  test.comment("-***- termdb/handlers/singleCellNumericValue -***-");
+  test.end();
+});
+(0, import_tape.default)("constructor: creates SearchHandler instance", function(test) {
+  const handler = new SearchHandler();
+  test.ok(handler instanceof SearchHandler, "creates instance of SearchHandler");
+  test.equal(handler.callback, void 0, "callback starts as undefined");
+  test.equal(handler.app, void 0, "app starts as undefined");
+  test.end();
+});
+(0, import_tape.default)("validateOpts: accepts valid opts object", function(test) {
+  const handler = new SearchHandler();
+  const opts = createValidOpts();
+  test.doesNotThrow(
+    () => handler.validateOpts(opts),
+    "validateOpts accepts valid options"
+  );
+  test.end();
+});
+(0, import_tape.default)("validateOpts: throws error for missing callback", function(test) {
+  const handler = new SearchHandler();
+  const opts = createValidOpts({ callback: null });
+  test.throws(
+    () => handler.validateOpts(opts),
+    /callback is required/,
+    "throws error when callback is null"
+  );
+  test.end();
+});
+(0, import_tape.default)("validateOpts: throws error for missing app", function(test) {
+  const handler = new SearchHandler();
+  const opts = createValidOpts({ app: null });
+  test.throws(
+    () => handler.validateOpts(opts),
+    /app is required/,
+    "throws error when app is null"
+  );
+  test.end();
+});
+(0, import_tape.default)("validateOpts: throws error for missing holder", function(test) {
+  const handler = new SearchHandler();
+  const opts = createValidOpts({ holder: null });
+  test.throws(
+    () => handler.validateOpts(opts),
+    /holder is required/,
+    "throws error when holder is null"
+  );
+  test.end();
+});
+(0, import_tape.default)("validateOpts: throws error for missing usecase", function(test) {
+  const handler = new SearchHandler();
+  const opts = createValidOpts({ usecase: null });
+  test.throws(
+    () => handler.validateOpts(opts),
+    /usecase is required/,
+    "throws error when usecase is null"
+  );
+  test.end();
+});
+(0, import_tape.default)("makeTerm: creates term from raw term", function(test) {
+  const handler = new SearchHandler();
+  const rawTerm = createMockTerm({ sample: "sample1" });
+  const result = handler.makeTerm(rawTerm, {});
+  test.equal(result.name, "test_term", "preserves term name");
+  test.equal(result.plot, "UMAP", "preserves UMAP");
+  test.equal(result.sample, "sample1", "preserves original sample");
+  test.end();
+});
+(0, import_tape.default)("makeTerm: adds sample from usecase config when term missing sample", function(test) {
+  const handler = new SearchHandler();
+  const rawTerm = createMockTerm({ sample: void 0 });
+  const usecaseConfig = { sample: "usecase_sample" };
+  const result = handler.makeTerm(rawTerm, usecaseConfig);
+  test.equal(result.sample, "usecase_sample", "uses sample from usecase config");
+  test.end();
+});
+(0, import_tape.default)("makeTerm: does not override term sample with usecase config sample", function(test) {
+  const handler = new SearchHandler();
+  const rawTerm = createMockTerm({ sample: "term_sample" });
+  const usecaseConfig = { sample: "usecase_sample" };
+  const result = handler.makeTerm(rawTerm, usecaseConfig);
+  test.equal(result.sample, "term_sample", "preserves term sample over usecase config");
+  test.end();
+});
+(0, import_tape.default)("makeTerm: does not mutate original term", function(test) {
+  const handler = new SearchHandler();
+  const rawTerm = createMockTerm({ sample: void 0 });
+  const usecaseConfig = { sample: "usecase_sample" };
+  const result = handler.makeTerm(rawTerm, usecaseConfig);
+  test.equal(rawTerm.sample, void 0, "original term is not mutated");
+  test.notEqual(result, rawTerm, "returns new term object");
+  test.end();
+});
+(0, import_tape.default)("init: throws error when no terms in termType2terms", async function(test) {
+  const handler = new SearchHandler();
+  const holder = getHolder();
+  const opts = createValidOpts({
+    holder,
+    app: createMockApp([])
+    // empty terms array
+  });
+  await handler.init(opts);
+  const errorDiv = holder.select("div");
+  const hasError = errorDiv.node() !== null;
+  test.ok(hasError, "displays error message when no terms available");
+  if (test["_ok"]) holder.remove();
+  test.end();
+});
+(0, import_tape.default)("init: displays error with correct message format", async function(test) {
+  const handler = new SearchHandler();
+  const holder = getHolder();
+  const opts = createValidOpts({
+    holder,
+    app: createMockApp([])
+  });
+  await handler.init(opts);
+  const divCount = holder.selectAll("div").size();
+  test.ok(divCount > 0, "error message appended to holder");
+  if (test["_ok"]) holder.remove();
+  test.end();
+});
+(0, import_tape.default)("init: sets callback and app on instance", async function(test) {
+  const handler = new SearchHandler();
+  const callback = () => {
+  };
+  const app = createMockApp([createMockTerm()]);
+  const opts = createValidOpts({ callback, app });
+  await handler.init(opts);
+  test.equal(handler.callback, callback, "callback set on instance");
+  test.equal(handler.app, app, "app set on instance");
+  if (test["_ok"]) opts.holder.remove();
+  test.end();
+});
+(0, import_tape.default)("init: creates term divs for available terms", async function(test) {
+  const handler = new SearchHandler();
+  const holder = getHolder();
+  const terms = [
+    createMockTerm({ name: "term1", plot: "plot1" }),
+    createMockTerm({ name: "term2", plot: "plot2" })
+  ];
+  const opts = createValidOpts({
+    holder,
+    app: createMockApp(terms)
+  });
+  await handler.init(opts);
+  const termLabels = holder.selectAll(".termlabel");
+  test.equal(termLabels.size(), 2, "creates label for each term");
+  if (test["_ok"]) holder.remove();
+  test.end();
+});
+(0, import_tape.default)("init: filters terms by plots when sample.plots provided", async function(test) {
+  const handler = new SearchHandler();
+  const holder = getHolder();
+  const terms = [
+    createMockTerm({ name: "term1", plot: "plot1" }),
+    createMockTerm({ name: "term2", plot: "plot2" }),
+    createMockTerm({ name: "term3", plot: "plot3" })
+  ];
+  const usecaseConfig = {
+    sample: {
+      plots: ["plot1", "plot2"]
+    }
+  };
+  const opts = createValidOpts({
+    holder,
+    app: createMockApp(terms),
+    usecase: createMockUsecase(usecaseConfig)
+  });
+  await handler.init(opts);
+  const termLabels = holder.selectAll(".termlabel");
+  test.equal(termLabels.size(), 2, "displays only terms matching filtered plots");
+  if (test["_ok"]) holder.remove();
+  test.end();
+});
+(0, import_tape.default)("init: filters terms by usecase.name when provided", async function(test) {
+  const handler = new SearchHandler();
+  const holder = getHolder();
+  const terms = [
+    createMockTerm({ name: "term1", plot: "plot1" }),
+    createMockTerm({ name: "term2", plot: "plot2" }),
+    createMockTerm({ name: "term3", plot: "plot2" })
+  ];
+  const usecaseConfig = {
+    name: "plot2"
+  };
+  const opts = createValidOpts({
+    holder,
+    app: createMockApp(terms),
+    usecase: createMockUsecase(usecaseConfig)
+  });
+  await handler.init(opts);
+  const termLabels = holder.selectAll(".termlabel");
+  test.equal(termLabels.size(), 2, "displays only terms matching usecase.name");
+  if (test["_ok"]) holder.remove();
+  test.end();
+});
+(0, import_tape.default)("init: displays all terms when no filter provided", async function(test) {
+  const handler = new SearchHandler();
+  const holder = getHolder();
+  const terms = [
+    createMockTerm({ name: "term1", plot: "plot1" }),
+    createMockTerm({ name: "term2", plot: "plot2" }),
+    createMockTerm({ name: "term3", plot: "plot3" })
+  ];
+  const opts = createValidOpts({
+    holder,
+    app: createMockApp(terms)
+  });
+  await handler.init(opts);
+  const termLabels = holder.selectAll(".termlabel");
+  test.equal(termLabels.size(), 3, "displays all terms when no filter applied");
+  if (test["_ok"]) holder.remove();
+  test.end();
+});
+(0, import_tape.default)("init: label includes plot name for multiple plots or no meta", async function(test) {
+  const handler = new SearchHandler();
+  const holder = getHolder();
+  const terms = [
+    createMockTerm({ name: "term1", plot: "plot1" })
+  ];
+  const usecaseConfig = {
+    sample: {
+      plots: ["plot1", "plot2"]
+      // multiple plots
+    }
+  };
+  const opts = createValidOpts({
+    holder,
+    app: createMockApp(terms),
+    usecase: createMockUsecase(usecaseConfig)
+  });
+  await handler.init(opts);
+  const label = holder.select(".termlabel").text();
+  test.ok(label.includes("term1"), "label includes term name");
+  test.ok(label.includes("plot1"), "label includes plot name for multiple plots");
+  if (test["_ok"]) holder.remove();
+  test.end();
+});
+(0, import_tape.default)("init: label excludes plot name when single plot or isMeta", async function(test) {
+  const handler = new SearchHandler();
+  const holder = getHolder();
+  const terms = [
+    createMockTerm({ name: "term1", plot: "plot1" })
+  ];
+  const usecaseConfig = {
+    sample: {
+      plots: ["plot1"],
+      isMetaResult: true
+    }
+  };
+  const opts = createValidOpts({
+    holder,
+    app: createMockApp(terms),
+    usecase: createMockUsecase(usecaseConfig)
+  });
+  await handler.init(opts);
+  const label = holder.select(".termlabel").text();
+  test.equal(label, "term1", "label is just term name for single plot with meta");
+  if (test["_ok"]) holder.remove();
+  test.end();
+});
+(0, import_tape.default)("init: callback invoked with correct term on click", async function(test) {
+  const handler = new SearchHandler();
+  const holder = getHolder();
+  const callbackResult = { captured: null };
+  const callback = (term) => {
+    callbackResult.captured = term;
+  };
+  const terms = [
+    createMockTerm({ name: "term1", plot: "plot1", sample: "sample1" })
+  ];
+  const opts = createValidOpts({
+    holder,
+    callback,
+    app: createMockApp(terms)
+  });
+  await handler.init(opts);
+  const labelNode = holder.select(".termlabel").node();
+  if (labelNode) {
+    const clickEvent = new MouseEvent("click");
+    labelNode.dispatchEvent(clickEvent);
+  }
+  test.ok(callbackResult.captured, "callback was invoked");
+  test.equal(callbackResult.captured?.name, "term1", "callback receives correct term");
+  if (test["_ok"]) holder.remove();
+  test.end();
+});
+(0, import_tape.default)("init: callback term includes sample from usecase if not in term", async function(test) {
+  const handler = new SearchHandler();
+  const holder = getHolder();
+  const callbackResult = { captured: null };
+  const callback = (term) => {
+    callbackResult.captured = term;
+  };
+  const terms = [
+    createMockTerm({ name: "term1", plot: "plot1", sample: void 0 })
+  ];
+  const usecaseConfig = {
+    sample: "usecase_sample"
+  };
+  const opts = createValidOpts({
+    holder,
+    callback,
+    app: createMockApp(terms),
+    usecase: createMockUsecase(usecaseConfig)
+  });
+  await handler.init(opts);
+  const labelNode = holder.select(".termlabel").node();
+  if (labelNode) {
+    const clickEvent = new MouseEvent("click");
+    labelNode.dispatchEvent(clickEvent);
+  }
+  test.equal(callbackResult.captured?.sample, "usecase_sample", "callback term includes usecase sample");
+  if (test["_ok"]) holder.remove();
+  test.end();
+});
+(0, import_tape.default)("init: applies termdiv and pill styling classes", async function(test) {
+  const handler = new SearchHandler();
+  const holder = getHolder();
+  const terms = [createMockTerm()];
+  const opts = createValidOpts({
+    holder,
+    app: createMockApp(terms)
+  });
+  await handler.init(opts);
+  const termdiv = holder.select(".termdiv");
+  const label = holder.select(".termlabel");
+  test.ok(termdiv.node() !== null, "applies termdiv class");
+  test.ok(label.classed("sja_filter_tag_btn"), "applies sja_filter_tag_btn class");
+  test.ok(label.classed("sja_tree_click_term"), "applies sja_tree_click_term class");
+  test.ok(label.classed("ts_pill"), "applies ts_pill class");
+  if (test["_ok"]) holder.remove();
+  test.end();
+});
+//# sourceMappingURL=singleCellNumericValue.unit.spec-7VJOMYQ6.js.map

package/dist/singleCellNumericValue.unit.spec-7VJOMYQ6.js.map

@@ -0,0 +1,7 @@
+{
+  "version": 3,
+  "sources": ["../termdb/handlers/test/singleCellNumericValue.unit.spec.ts"],
+  "sourcesContent": ["import tape from 'tape'\nimport * as d3s from 'd3-selection'\nimport { SearchHandler } from '../singleCellNumericValue.ts'\nimport { TermTypeGroups } from '#shared/terms.js'\n\n/*************************\n reusable helper functions\n**************************/\n\nfunction getHolder() {\n    return d3s.select('body').append('div')\n}\n\nfunction createMockApp(termType2terms: any[] = []) {\n\treturn {\n\t\tvocabApi: {\n\t\t\ttermdbConfig: {\n\t\t\t\ttermType2terms: {\n\t\t\t\t\t[TermTypeGroups.SINGLECELL_NUMERIC_VALUE]: termType2terms\n\t\t\t\t}\n\t\t\t}\n\t\t}\n\t}\n}\n\nfunction createMockUsecase(config: any = {}) {\n\treturn {\n\t\tspecialCase: {\n\t\t\tconfig\n\t\t}\n\t}\n}\n\nfunction createMockTerm(overrides: any = {}) {\n\treturn {\n\t\tname: 'test_term',\n\t\tplot: 'UMAP',\n\t\tsample: undefined,\n\t\t...overrides\n\t}\n}\n\nfunction createValidOpts(overrides: any = {}) {\n\treturn {\n\t\tcallback: () => {},\n\t\tapp: createMockApp(),\n\t\tholder: getHolder(),\n\t\tusecase: createMockUsecase(),\n\t\t...overrides\n\t}\n}\n\n/**************\n test sections\n***************/\n\ntape('\\n', function (test) {\n\ttest.comment('-***- termdb/handlers/singleCellNumericValue -***-')\n\ttest.end()\n})\n\n// ===== Constructor Tests =====\ntape('constructor: creates SearchHandler instance', function (test) {\n\tconst handler = new SearchHandler()\n\ttest.ok(handler instanceof SearchHandler, 'creates instance of SearchHandler')\n\ttest.equal(handler.callback, undefined, 'callback starts as undefined')\n\ttest.equal(handler.app, undefined, 'app starts as undefined')\n\ttest.end()\n})\n\n// ===== ValidateOpts Tests =====\ntape('validateOpts: accepts valid opts object', function (test) {\n\tconst handler = new SearchHandler()\n\tconst opts = createValidOpts()\n\ttest.doesNotThrow(\n\t\t() => handler.validateOpts(opts),\n\t\t'validateOpts accepts valid options'\n\t)\n\ttest.end()\n})\n\ntape('validateOpts: throws error for missing callback', function (test) {\n\tconst handler = new SearchHandler()\n\tconst opts = createValidOpts({ callback: null })\n\ttest.throws(\n\t\t() => handler.validateOpts(opts),\n\t\t/callback is required/,\n\t\t'throws error when callback is null'\n\t)\n\ttest.end()\n})\n\ntape('validateOpts: throws error for missing app', function (test) {\n\tconst handler = new SearchHandler()\n\tconst opts = createValidOpts({ app: null })\n\ttest.throws(\n\t\t() => handler.validateOpts(opts),\n\t\t/app is required/,\n\t\t'throws error when app is null'\n\t)\n\ttest.end()\n})\n\ntape('validateOpts: throws error for missing holder', function (test) {\n\tconst handler = new SearchHandler()\n\tconst opts = createValidOpts({ holder: null })\n\ttest.throws(\n\t\t() => handler.validateOpts(opts),\n\t\t/holder is required/,\n\t\t'throws error when holder is null'\n\t)\n\ttest.end()\n})\n\ntape('validateOpts: throws error for missing usecase', function (test) {\n\tconst handler = new SearchHandler()\n\tconst opts = createValidOpts({ usecase: null })\n\ttest.throws(\n\t\t() => handler.validateOpts(opts),\n\t\t/usecase is required/,\n\t\t'throws error when usecase is null'\n\t)\n\ttest.end()\n})\n\n// tape('validateOpts: throws error for missing termType2terms', function (test) {\n// \tconst handler = new SearchHandler()\n// \tconst app = {\n// \t\tvocabApi: {\n// \t\t\ttermdbConfig: {}\n// \t\t}\n// \t}\n// \tconst opts = createValidOpts({ app })\n// \ttest.throws(\n// \t\t() => handler.validateOpts(opts),\n// \t\t/termType2terms is required/,\n// \t\t'throws error when termType2terms is missing'\n// \t)\n// \ttest.end()\n// })\n\n// ===== MakeTerm Tests =====\ntape('makeTerm: creates term from raw term', function (test) {\n\tconst handler = new SearchHandler()\n\tconst rawTerm = createMockTerm({ sample: 'sample1' })\n\tconst result = handler.makeTerm(rawTerm, {})\n\t\n\ttest.equal(result.name, 'test_term', 'preserves term name')\n\ttest.equal(result.plot, 'UMAP', 'preserves UMAP')\n\ttest.equal(result.sample, 'sample1', 'preserves original sample')\n\ttest.end()\n})\n\ntape('makeTerm: adds sample from usecase config when term missing sample', function (test) {\n\tconst handler = new SearchHandler()\n\tconst rawTerm = createMockTerm({ sample: undefined })\n\tconst usecaseConfig = { sample: 'usecase_sample' }\n\tconst result = handler.makeTerm(rawTerm, usecaseConfig)\n\t\n\ttest.equal(result.sample, 'usecase_sample', 'uses sample from usecase config')\n\ttest.end()\n})\n\ntape('makeTerm: does not override term sample with usecase config sample', function (test) {\n\tconst handler = new SearchHandler()\n\tconst rawTerm = createMockTerm({ sample: 'term_sample' })\n\tconst usecaseConfig = { sample: 'usecase_sample' }\n\tconst result = handler.makeTerm(rawTerm, usecaseConfig)\n\t\n\ttest.equal(result.sample, 'term_sample', 'preserves term sample over usecase config')\n\ttest.end()\n})\n\ntape('makeTerm: does not mutate original term', function (test) {\n\tconst handler = new SearchHandler()\n\tconst rawTerm = createMockTerm({ sample: undefined })\n\tconst usecaseConfig = { sample: 'usecase_sample' }\n\tconst result = handler.makeTerm(rawTerm, usecaseConfig)\n\t\n\ttest.equal((rawTerm as any).sample, undefined, 'original term is not mutated')\n\ttest.notEqual(result, rawTerm, 'returns new term object')\n\t\n    test.end()\n})\n\n// ===== Init Tests =====\ntape('init: throws error when no terms in termType2terms', async function (test) {\n\tconst handler = new SearchHandler()\n\tconst holder = getHolder()\n\tconst opts = createValidOpts({\n\t\tholder,\n\t\tapp: createMockApp([]) // empty terms array\n\t})\n\t\n\tawait handler.init(opts)\n\t\n\tconst errorDiv = holder.select('div')\n\tconst hasError = errorDiv.node() !== null\n\ttest.ok(hasError, 'displays error message when no terms available')\n\tif (test['_ok']) holder.remove()\n    test.end()\n})\n\ntape('init: displays error with correct message format', async function (test) {\n\tconst handler = new SearchHandler()\n\tconst holder = getHolder()\n\tconst opts = createValidOpts({\n\t\tholder,\n\t\tapp: createMockApp([])\n\t})\n\t\n\tawait handler.init(opts)\n\t\n\tconst divCount = holder.selectAll('div').size()\n\ttest.ok(divCount > 0, 'error message appended to holder')\n\t\n    if (test['_ok']) holder.remove()\n    test.end()\n})\n\ntape('init: sets callback and app on instance', async function (test) {\n\tconst handler = new SearchHandler()\n\tconst callback = () => {}\n\tconst app = createMockApp([createMockTerm()])\n\tconst opts = createValidOpts({ callback, app })\n\t\n\tawait handler.init(opts)\n\t\n\ttest.equal(handler.callback, callback, 'callback set on instance')\n\ttest.equal(handler.app, app, 'app set on instance')\n\tif (test['_ok']) opts.holder.remove()\n    test.end()\n})\n\ntape('init: creates term divs for available terms', async function (test) {\n\tconst handler = new SearchHandler()\n\tconst holder = getHolder()\n\tconst terms = [\n\t\tcreateMockTerm({ name: 'term1', plot: 'plot1' }),\n\t\tcreateMockTerm({ name: 'term2', plot: 'plot2' })\n\t]\n\tconst opts = createValidOpts({\n\t\tholder,\n\t\tapp: createMockApp(terms)\n\t})\n\t\n\tawait handler.init(opts)\n\t\n\tconst termLabels = holder.selectAll('.termlabel')\n\ttest.equal(termLabels.size(), 2, 'creates label for each term')\n\tif (test['_ok']) holder.remove()\n    test.end()\n})\n\ntape('init: filters terms by plots when sample.plots provided', async function (test) {\n\tconst handler = new SearchHandler()\n\tconst holder = getHolder()\n\tconst terms = [\n\t\tcreateMockTerm({ name: 'term1', plot: 'plot1' }),\n\t\tcreateMockTerm({ name: 'term2', plot: 'plot2' }),\n\t\tcreateMockTerm({ name: 'term3', plot: 'plot3' })\n\t]\n\tconst usecaseConfig = {\n\t\tsample: {\n\t\t\tplots: ['plot1', 'plot2']\n\t\t}\n\t}\n\tconst opts = createValidOpts({\n\t\tholder,\n\t\tapp: createMockApp(terms),\n\t\tusecase: createMockUsecase(usecaseConfig)\n\t})\n\t\n\tawait handler.init(opts)\n\t\n\tconst termLabels = holder.selectAll('.termlabel')\n\ttest.equal(termLabels.size(), 2, 'displays only terms matching filtered plots')\n\tif (test['_ok']) holder.remove()\n    test.end()\n})\n\ntape('init: filters terms by usecase.name when provided', async function (test) {\n\tconst handler = new SearchHandler()\n\tconst holder = getHolder()\n\tconst terms = [\n\t\tcreateMockTerm({ name: 'term1', plot: 'plot1' }),\n\t\tcreateMockTerm({ name: 'term2', plot: 'plot2' }),\n\t\tcreateMockTerm({ name: 'term3', plot: 'plot2' })\n\t]\n\tconst usecaseConfig = {\n\t\tname: 'plot2'\n\t}\n\tconst opts = createValidOpts({\n\t\tholder,\n\t\tapp: createMockApp(terms),\n\t\tusecase: createMockUsecase(usecaseConfig)\n\t})\n\t\n\tawait handler.init(opts)\n\t\n\tconst termLabels = holder.selectAll('.termlabel')\n\ttest.equal(termLabels.size(), 2, 'displays only terms matching usecase.name')\n\tif (test['_ok']) holder.remove()\n    test.end()\n})\n\ntape('init: displays all terms when no filter provided', async function (test) {\n\tconst handler = new SearchHandler()\n\tconst holder = getHolder()\n\tconst terms = [\n\t\tcreateMockTerm({ name: 'term1', plot: 'plot1' }),\n\t\tcreateMockTerm({ name: 'term2', plot: 'plot2' }),\n\t\tcreateMockTerm({ name: 'term3', plot: 'plot3' })\n\t]\n\tconst opts = createValidOpts({\n\t\tholder,\n\t\tapp: createMockApp(terms)\n\t})\n\t\n\tawait handler.init(opts)\n\t\n\tconst termLabels = holder.selectAll('.termlabel')\n\ttest.equal(termLabels.size(), 3, 'displays all terms when no filter applied')\n\tif (test['_ok']) holder.remove()\n    test.end()\n})\n\ntape('init: label includes plot name for multiple plots or no meta', async function (test) {\n\tconst handler = new SearchHandler()\n\tconst holder = getHolder()\n\tconst terms = [\n\t\tcreateMockTerm({ name: 'term1', plot: 'plot1' })\n\t]\n\tconst usecaseConfig = {\n\t\tsample: {\n\t\t\tplots: ['plot1', 'plot2'] // multiple plots\n\t\t}\n\t}\n\tconst opts = createValidOpts({\n\t\tholder,\n\t\tapp: createMockApp(terms),\n\t\tusecase: createMockUsecase(usecaseConfig)\n\t})\n\t\n\tawait handler.init(opts)\n\t\n\tconst label = holder.select('.termlabel').text()\n\ttest.ok(label.includes('term1'), 'label includes term name')\n\ttest.ok(label.includes('plot1'), 'label includes plot name for multiple plots')\n\tif (test['_ok']) holder.remove()\n    test.end()\n})\n\ntape('init: label excludes plot name when single plot or isMeta', async function (test) {\n\tconst handler = new SearchHandler()\n\tconst holder = getHolder()\n\tconst terms = [\n\t\tcreateMockTerm({ name: 'term1', plot: 'plot1' })\n\t]\n\tconst usecaseConfig = {\n\t\tsample: {\n\t\t\tplots: ['plot1'],\n\t\t\tisMetaResult: true\n\t\t}\n\t}\n\tconst opts = createValidOpts({\n\t\tholder,\n\t\tapp: createMockApp(terms),\n\t\tusecase: createMockUsecase(usecaseConfig)\n\t})\n\t\n\tawait handler.init(opts)\n\t\n\tconst label = holder.select('.termlabel').text()\n\ttest.equal(label, 'term1', 'label is just term name for single plot with meta')\n\tif (test['_ok']) holder.remove()\n    test.end()\n})\n\ntape('init: callback invoked with correct term on click', async function (test) {\n\tconst handler = new SearchHandler()\n\tconst holder = getHolder()\n\tconst callbackResult: { captured: any } = { captured: null }\n\tconst callback = (term: any) => {\n\t\tcallbackResult.captured = term\n\t}\n\tconst terms = [\n\t\tcreateMockTerm({ name: 'term1', plot: 'plot1', sample: 'sample1' })\n\t]\n\tconst opts = createValidOpts({\n\t\tholder,\n\t\tcallback,\n\t\tapp: createMockApp(terms)\n\t})\n\t\n\tawait handler.init(opts)\n\t\n\t// Simulate click on term label\n\tconst labelNode = holder.select('.termlabel').node() as HTMLElement\n\tif (labelNode) {\n\t\tconst clickEvent = new MouseEvent('click')\n\t\tlabelNode.dispatchEvent(clickEvent)\n\t}\n\t\n\ttest.ok(callbackResult.captured, 'callback was invoked')\n\ttest.equal(callbackResult.captured?.name, 'term1', 'callback receives correct term')\n\tif (test['_ok']) holder.remove()\n    test.end()\n})\n\ntape('init: callback term includes sample from usecase if not in term', async function (test) {\n\tconst handler = new SearchHandler()\n\tconst holder = getHolder()\n\tconst callbackResult: { captured: any } = { captured: null }\n\tconst callback = (term: any) => {\n\t\tcallbackResult.captured = term\n\t}\n\tconst terms = [\n\t\tcreateMockTerm({ name: 'term1', plot: 'plot1', sample: undefined })\n\t]\n\tconst usecaseConfig = {\n\t\tsample: 'usecase_sample'\n\t}\n\tconst opts = createValidOpts({\n\t\tholder,\n\t\tcallback,\n\t\tapp: createMockApp(terms),\n\t\tusecase: createMockUsecase(usecaseConfig)\n\t})\n\t\n\tawait handler.init(opts)\n\t\n\t// Simulate click\n\tconst labelNode = holder.select('.termlabel').node() as HTMLElement\n\tif (labelNode) {\n\t\tconst clickEvent = new MouseEvent('click')\n\t\tlabelNode.dispatchEvent(clickEvent)\n\t}\n\t\n\ttest.equal(callbackResult.captured?.sample, 'usecase_sample', 'callback term includes usecase sample')\n\tif (test['_ok']) holder.remove()\n    test.end()\n})\n\ntape('init: applies termdiv and pill styling classes', async function (test) {\n\tconst handler = new SearchHandler()\n\tconst holder = getHolder()\n\tconst terms = [createMockTerm()]\n\tconst opts = createValidOpts({\n\t\tholder,\n\t\tapp: createMockApp(terms)\n\t})\n\t\n\tawait handler.init(opts)\n\t\n\tconst termdiv = holder.select('.termdiv')\n\tconst label = holder.select('.termlabel')\n\t\n\ttest.ok(termdiv.node() !== null, 'applies termdiv class')\n\ttest.ok(label.classed('sja_filter_tag_btn'), 'applies sja_filter_tag_btn class')\n\ttest.ok(label.classed('sja_tree_click_term'), 'applies sja_tree_click_term class')\n\ttest.ok(label.classed('ts_pill'), 'applies ts_pill class')\n\tif (test['_ok']) holder.remove()\n    test.end()\n})\n\n// tape('init: deduplicates terms in filtered set', async function (test) {\n// \tconst handler = new SearchHandler()\n// \tconst holder = getHolder()\n// \tconst terms = [\n// \t\tcreateMockTerm({ name: 'term1', plot: 'plot1' }),\n// \t\tcreateMockTerm({ name: 'term1', plot: 'plot1' }) // duplicate\n// \t]\n// \tconst usecaseConfig = {\n// \t\tsample: {\n// \t\t\tplots: ['plot1']\n// \t\t}\n// \t}\n// \tconst opts = createValidOpts({\n// \t\tholder,\n// \t\tapp: createMockApp(terms),\n// \t\tusecase: createMockUsecase(usecaseConfig)\n// \t})\n\t\n// \tawait handler.init(opts)\n\t\n// \tconst termLabels = holder.selectAll('.termlabel')\n// \ttest.equal(termLabels.size(), 1, 'deduplicates identical terms')\n// \ttest.end()\n// })\n\n"],
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+  "names": ["tape"]
+}

package/dist/singleCellPlot-BG7UJOHA.js

@@ -0,0 +1,48 @@
+import {
+  componentInit,
+  getContourImage,
+  getDefaultSingleCellSettings,
+  getMouseNDC,
+  getPlotConfig,
+  scatterInit
+} from "./chunk-2PDBU42F.js";
+import "./chunk-JH73IL4C.js";
+import "./chunk-J5GQGWYX.js";
+import "./chunk-X46YA4CB.js";
+import "./chunk-72PLI3GC.js";
+import "./chunk-PRZWSBMA.js";
+import "./chunk-C3HEDQPT.js";
+import "./chunk-HJ6L54YS.js";
+import "./chunk-KV4W2ACA.js";
+import "./chunk-B6UXFX73.js";
+import "./chunk-ELJX3QIQ.js";
+import "./chunk-3FEP6B5T.js";
+import "./chunk-EEB5VE2A.js";
+import "./chunk-6RRZRISL.js";
+import "./chunk-2KM4PRQM.js";
+import "./chunk-OBDIJ4QS.js";
+import "./chunk-6FG6JFZP.js";
+import "./chunk-3XBG5HIV.js";
+import "./chunk-SB36AUG7.js";
+import "./chunk-WINIL2KN.js";
+import "./chunk-PF4DSFDR.js";
+import "./chunk-7X6NF7NI.js";
+import "./chunk-W5J3LTYS.js";
+import "./chunk-Z2ZITHT4.js";
+import "./chunk-4OLM3KSB.js";
+import "./chunk-FXQXCOII.js";
+import "./chunk-TLT4YIG3.js";
+import "./chunk-5R63Q5KH.js";
+import "./chunk-I6Y4O3RR.js";
+import "./chunk-Q5RDQNIT.js";
+import "./chunk-DQC5FFGV.js";
+import "./chunk-HS5PO5ZQ.js";
+export {
+  componentInit,
+  getContourImage,
+  getDefaultSingleCellSettings,
+  getMouseNDC,
+  getPlotConfig,
+  scatterInit
+};
+//# sourceMappingURL=singleCellPlot-BG7UJOHA.js.map

package/dist/singlecell-BANNFGBS.js

@@ -0,0 +1,81 @@
+import {
+  appInit
+} from "./chunk-QGH5BM2D.js";
+import "./chunk-YHWQWVWX.js";
+import "./chunk-X46YA4CB.js";
+import "./chunk-SKMFMGCD.js";
+import "./chunk-C3HEDQPT.js";
+import "./chunk-HJ6L54YS.js";
+import "./chunk-KV4W2ACA.js";
+import "./chunk-B6UXFX73.js";
+import "./chunk-ELJX3QIQ.js";
+import "./chunk-3FEP6B5T.js";
+import "./chunk-EEB5VE2A.js";
+import "./chunk-6RRZRISL.js";
+import "./chunk-2KM4PRQM.js";
+import "./chunk-OBDIJ4QS.js";
+import "./chunk-6FG6JFZP.js";
+import "./chunk-3XBG5HIV.js";
+import "./chunk-SB36AUG7.js";
+import {
+  copyMerge
+} from "./chunk-WINIL2KN.js";
+import "./chunk-PF4DSFDR.js";
+import "./chunk-7X6NF7NI.js";
+import "./chunk-W5J3LTYS.js";
+import "./chunk-Z2ZITHT4.js";
+import "./chunk-4OLM3KSB.js";
+import "./chunk-FXQXCOII.js";
+import "./chunk-TLT4YIG3.js";
+import "./chunk-5R63Q5KH.js";
+import "./chunk-I6Y4O3RR.js";
+import "./chunk-Q5RDQNIT.js";
+import "./chunk-DQC5FFGV.js";
+import "./chunk-HS5PO5ZQ.js";
+
+// gdc/singlecell.ts
+var gdcGenome = "hg38";
+var gdcDslabel = "GDC";
+async function init(arg, holder, genomes) {
+  const plotAppApi = await appInit({
+    holder,
+    state: {
+      genome: gdcGenome,
+      dslabel: gdcDslabel,
+      termfilter: { filter0: arg.filter0 },
+      plots: arg.state?.plots || [{ chartType: "singleCellPlot" }]
+    },
+    genome: genomes[gdcGenome],
+    app: copyMerge({}, arg.opts?.app || {}),
+    opts: {
+      singleCellPlot: arg.opts?.singleCellPlot || {}
+    }
+  });
+  const api = {
+    update: async (updateArg) => {
+      if (!plotAppApi) return;
+      if ("filter0" in updateArg) {
+        plotAppApi.dispatch({
+          type: "app_refresh",
+          subactions: [
+            {
+              type: "filter_replace",
+              filter0: updateArg.filter0
+            }
+          ]
+        });
+      } else {
+        plotAppApi.dispatch({
+          type: "plot_edit",
+          id: plotAppApi.getState().plots[0].id,
+          config: updateArg
+        });
+      }
+    }
+  };
+  return api;
+}
+export {
+  init
+};
+//# sourceMappingURL=singlecell-BANNFGBS.js.map