@noyrax/5d-database-plugin 0.1.0

package/out/embedding/embedding-pipeline.js

@@ -0,0 +1,290 @@
+"use strict";
+var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    var desc = Object.getOwnPropertyDescriptor(m, k);
+    if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
+      desc = { enumerable: true, get: function() { return m[k]; } };
+    }
+    Object.defineProperty(o, k2, desc);
+}) : (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    o[k2] = m[k];
+}));
+var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
+    Object.defineProperty(o, "default", { enumerable: true, value: v });
+}) : function(o, v) {
+    o["default"] = v;
+});
+var __importStar = (this && this.__importStar) || (function () {
+    var ownKeys = function(o) {
+        ownKeys = Object.getOwnPropertyNames || function (o) {
+            var ar = [];
+            for (var k in o) if (Object.prototype.hasOwnProperty.call(o, k)) ar[ar.length] = k;
+            return ar;
+        };
+        return ownKeys(o);
+    };
+    return function (mod) {
+        if (mod && mod.__esModule) return mod;
+        var result = {};
+        if (mod != null) for (var k = ownKeys(mod), i = 0; i < k.length; i++) if (k[i] !== "default") __createBinding(result, mod, k[i]);
+        __setModuleDefault(result, mod);
+        return result;
+    };
+})();
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.EmbeddingPipeline = void 0;
+const embedding_repository_1 = require("../repositories/embedding-repository");
+const module_api_1 = require("../api/module-api");
+const symbol_api_1 = require("../api/symbol-api");
+const dependency_api_1 = require("../api/dependency-api");
+const adr_api_1 = require("../api/adr-api");
+const change_api_1 = require("../api/change-api");
+const uuid_1 = require("uuid");
+const crypto = __importStar(require("crypto"));
+/**
+ * Coordinates embedding generation for all 5 dimensions.
+ * Syncs embeddings with 5D-DBs using hash-based change detection.
+ */
+class EmbeddingPipeline {
+    constructor(dbManager, embeddingGenerator) {
+        this.dbManager = dbManager;
+        this.embeddingGenerator = embeddingGenerator;
+        this.moduleApi = new module_api_1.ModuleApi(dbManager);
+        this.symbolApi = new symbol_api_1.SymbolApi(dbManager);
+        this.dependencyApi = new dependency_api_1.DependencyApi(dbManager);
+        this.adrApi = new adr_api_1.AdrApi(dbManager);
+        this.changeApi = new change_api_1.ChangeApi(dbManager);
+    }
+    /**
+     * Syncs embeddings for all dimensions.
+     * Only generates embeddings for changed/new entities.
+     */
+    async syncEmbeddings(pluginId) {
+        console.log(`[EmbeddingPipeline] Starting embedding sync for plugin ${pluginId}`);
+        if (!this.embeddingGenerator.isConfigured()) {
+            console.warn('[EmbeddingPipeline] Embedding generator not configured. Skipping sync.');
+            return;
+        }
+        const model = this.embeddingGenerator.getModel();
+        // Sync each dimension
+        await this.syncDimension('X', pluginId, model);
+        await this.syncDimension('Y', pluginId, model);
+        await this.syncDimension('Z', pluginId, model);
+        await this.syncDimension('W', pluginId, model);
+        await this.syncDimension('T', pluginId, model);
+        console.log(`[EmbeddingPipeline] Embedding sync completed for plugin ${pluginId}`);
+    }
+    /**
+     * Syncs embeddings for a specific dimension.
+     */
+    async syncDimension(dimension, pluginId, model) {
+        console.log(`[EmbeddingPipeline] Syncing dimension ${dimension} for plugin ${pluginId}`);
+        const db = await this.dbManager.getDatabase('V');
+        const embeddingRepo = new embedding_repository_1.EmbeddingRepository(db);
+        // Check vector database availability once
+        const vectorDb = this.dbManager.getVectorDatabase();
+        const vectorDbAvailable = vectorDb && vectorDb.isAvailable();
+        if (vectorDb) {
+            if (vectorDb.isAvailable()) {
+                console.log(`[EmbeddingPipeline] Vector database available: ${vectorDb.constructor.name}`);
+            }
+            else {
+                console.warn(`[EmbeddingPipeline] Vector database initialized but not available. Will use fallback cosine similarity.`);
+            }
+        }
+        else {
+            console.warn(`[EmbeddingPipeline] Vector database not initialized. Embeddings will be stored in SQLite only (fallback to cosine similarity).`);
+        }
+        // Get all entities from the dimension
+        const entities = await this.getEntitiesForDimension(dimension, pluginId);
+        console.log(`[EmbeddingPipeline] Found ${entities.length} entities in dimension ${dimension}`);
+        // Get existing embeddings
+        const existingEmbeddings = await embeddingRepo.getAllByDimension(dimension, pluginId, model);
+        const existingMap = new Map();
+        for (const emb of existingEmbeddings) {
+            existingMap.set(emb.entity_id, emb);
+        }
+        // Find entities that need embedding generation
+        const toGenerate = [];
+        for (const entity of entities) {
+            const content = this.extractContentForEmbedding(dimension, entity);
+            const contentHash = this.computeContentHash(content);
+            const existing = existingMap.get(entity.id);
+            if (!existing || existing.content_hash !== contentHash) {
+                toGenerate.push({ entity, content, contentHash });
+            }
+        }
+        console.log(`[EmbeddingPipeline] Need to generate ${toGenerate.length} embeddings for dimension ${dimension}`);
+        // Generate embeddings in batch for new/changed entities
+        if (toGenerate.length > 0) {
+            const batchItems = toGenerate.map(item => ({
+                dimension,
+                entityId: item.entity.id,
+                content: item.content
+            }));
+            const embeddings = await this.embeddingGenerator.generateBatch(batchItems);
+            // Save embeddings
+            const now = new Date();
+            for (const item of toGenerate) {
+                const embeddingVector = embeddings.get(item.entity.id);
+                if (!embeddingVector) {
+                    console.warn(`[EmbeddingPipeline] No embedding generated for entity ${item.entity.id} in dimension ${dimension}`);
+                    continue;
+                }
+                // Convert array to Buffer (1536 floats = 1536 * 4 bytes = 6144 bytes)
+                const vectorBuffer = Buffer.from(new Float32Array(embeddingVector).buffer);
+                const existing = existingMap.get(item.entity.id);
+                const externalId = this.getExternalId(dimension, item.entity);
+                let embeddingId;
+                if (existing) {
+                    // Update existing embedding
+                    existing.content_hash = item.contentHash;
+                    existing.embedding_vector = vectorBuffer;
+                    existing.updated_at = now;
+                    await embeddingRepo.update(existing);
+                    embeddingId = existing.id;
+                }
+                else {
+                    // Create new embedding
+                    const embedding = {
+                        id: (0, uuid_1.v4)(),
+                        plugin_id: pluginId,
+                        dimension,
+                        entity_id: item.entity.id,
+                        external_id: externalId,
+                        content_hash: item.contentHash,
+                        embedding_model: model,
+                        embedding_vector: vectorBuffer,
+                        created_at: now,
+                        updated_at: now
+                    };
+                    await embeddingRepo.create(embedding);
+                    embeddingId = embedding.id;
+                }
+                // Sync to vector database (VSS or external DB)
+                if (vectorDbAvailable) {
+                    try {
+                        // Convert Buffer to Float32Array for vector database
+                        const vectorArray = new Float32Array(vectorBuffer.buffer, vectorBuffer.byteOffset, vectorBuffer.length / 4);
+                        await vectorDb.upsertEmbedding(embeddingId, vectorArray);
+                    }
+                    catch (vectorDbError) {
+                        console.warn(`[EmbeddingPipeline] Failed to sync embedding ${embeddingId} to vector database: ${vectorDbError}`);
+                        // Continue - fallback to cosine similarity will be used
+                    }
+                }
+            }
+            console.log(`[EmbeddingPipeline] Generated and synced ${toGenerate.length} new/changed embeddings for dimension ${dimension}`);
+        }
+        // Sync all existing embeddings to vector database (if vector DB is available)
+        // This ensures that even if embeddings were created before ChromaDB was available,
+        // they get synchronized when ChromaDB becomes available
+        if (vectorDbAvailable && existingEmbeddings.length > 0) {
+            console.log(`[EmbeddingPipeline] Syncing ${existingEmbeddings.length} existing embeddings to vector database for dimension ${dimension}`);
+            let syncedCount = 0;
+            let failedCount = 0;
+            for (const embedding of existingEmbeddings) {
+                try {
+                    // Convert Buffer to Float32Array
+                    const vectorBuffer = embedding.embedding_vector;
+                    const vectorArray = new Float32Array(vectorBuffer.buffer, vectorBuffer.byteOffset, vectorBuffer.length / 4);
+                    await vectorDb.upsertEmbedding(embedding.id, vectorArray);
+                    syncedCount++;
+                }
+                catch (vectorDbError) {
+                    console.warn(`[EmbeddingPipeline] Failed to sync existing embedding ${embedding.id} to vector database: ${vectorDbError}`);
+                    failedCount++;
+                }
+            }
+            console.log(`[EmbeddingPipeline] Synced ${syncedCount} existing embeddings to vector database for dimension ${dimension} (${failedCount} failed)`);
+        }
+    }
+    /**
+     * Gets all entities for a dimension.
+     */
+    async getEntitiesForDimension(dimension, pluginId) {
+        switch (dimension) {
+            case 'X':
+                return await this.moduleApi.getAllModules(pluginId);
+            case 'Y':
+                return await this.symbolApi.getAllSymbols(pluginId);
+            case 'Z':
+                return await this.dependencyApi.getAllDependencies(pluginId);
+            case 'W':
+                return await this.adrApi.getAllAdrs(pluginId);
+            case 'T':
+                // For T-dimension, we use the latest change report
+                const latestReport = await this.changeApi.getLatestChangeReport(pluginId);
+                return latestReport ? [latestReport] : [];
+        }
+    }
+    /**
+     * Extracts content for embedding based on dimension.
+     */
+    extractContentForEmbedding(dimension, entity) {
+        switch (dimension) {
+            case 'X': {
+                // X (Modules): Full markdown content
+                const module = entity;
+                return module.content_markdown;
+            }
+            case 'Y': {
+                // Y (Symbols): {name} {signature} {dependencies_summary}
+                const symbol = entity;
+                const signature = JSON.parse(symbol.signature_json || '{}');
+                const signatureStr = JSON.stringify(signature, null, 2);
+                const summary = symbol.summary || '';
+                return `${symbol.name}\n${signatureStr}\n${summary}`;
+            }
+            case 'Z': {
+                // Z (Dependencies): {from_module} → {to_module} {dependency_type} {symbols_summary}
+                const dep = entity;
+                const symbols = dep.symbols_json ? JSON.parse(dep.symbols_json) : [];
+                const symbolsStr = symbols.length > 0 ? ` (${symbols.join(', ')})` : '';
+                return `${dep.from_module} → ${dep.to_module} [${dep.dependency_type}]${symbolsStr}`;
+            }
+            case 'W': {
+                // W (ADRs): {title} {content} {linked_files}
+                const adr = entity;
+                // Extract linked files from content (simple pattern matching)
+                const fileMatches = adr.content_markdown.match(/src\/[^\s\)]+/g) || [];
+                const filesStr = fileMatches.length > 0 ? `\nLinked files: ${fileMatches.join(', ')}` : '';
+                return `${adr.title}\n${adr.content_markdown}${filesStr}`;
+            }
+            case 'T': {
+                // T (Changes): {run_type} {symbol_changes} {dependency_changes}
+                const report = entity;
+                // For T-dimension, we'd need to fetch symbol and dependency changes
+                // For now, use report metadata
+                return `Change Report: ${report.run_type}\nParsed: ${report.parsed_files} files\nDependencies: ${report.total_dependencies}`;
+            }
+        }
+    }
+    /**
+     * Gets external ID for an entity.
+     */
+    getExternalId(dimension, entity) {
+        switch (dimension) {
+            case 'X':
+                return entity.file_path;
+            case 'Y':
+                return entity.symbol_id;
+            case 'Z':
+                const dep = entity;
+                return `${dep.from_module} → ${dep.to_module}`;
+            case 'W':
+                return entity.adr_number;
+            case 'T':
+                return entity.id;
+        }
+    }
+    /**
+     * Computes content hash for change detection.
+     */
+    computeContentHash(content) {
+        return crypto.createHash('sha256').update(content).digest('hex');
+    }
+}
+exports.EmbeddingPipeline = EmbeddingPipeline;
+//# sourceMappingURL=embedding-pipeline.js.map

package/out/embedding/embedding-pipeline.js.map

@@ -0,0 +1 @@
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package/out/extension.d.ts

@@ -0,0 +1,10 @@
+import * as vscode from 'vscode';
+/**
+ * Activates the 5D Database Plugin extension.
+ */
+export declare function activate(context: vscode.ExtensionContext): Promise<void>;
+/**
+ * Deactivates the extension.
+ */
+export declare function deactivate(): void;
+//# sourceMappingURL=extension.d.ts.map

package/out/extension.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"extension.d.ts","sourceRoot":"","sources":["../src/extension.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,MAAM,MAAM,QAAQ,CAAC;AAuCjC;;GAEG;AACH,wBAAsB,QAAQ,CAAC,OAAO,EAAE,MAAM,CAAC,gBAAgB,GAAG,OAAO,CAAC,IAAI,CAAC,CA8F9E;AAED;;GAEG;AACH,wBAAgB,UAAU,IAAI,IAAI,CAEjC"}

package/out/extension.js

@@ -0,0 +1,164 @@
+"use strict";
+var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    var desc = Object.getOwnPropertyDescriptor(m, k);
+    if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
+      desc = { enumerable: true, get: function() { return m[k]; } };
+    }
+    Object.defineProperty(o, k2, desc);
+}) : (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    o[k2] = m[k];
+}));
+var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
+    Object.defineProperty(o, "default", { enumerable: true, value: v });
+}) : function(o, v) {
+    o["default"] = v;
+});
+var __importStar = (this && this.__importStar) || (function () {
+    var ownKeys = function(o) {
+        ownKeys = Object.getOwnPropertyNames || function (o) {
+            var ar = [];
+            for (var k in o) if (Object.prototype.hasOwnProperty.call(o, k)) ar[ar.length] = k;
+            return ar;
+        };
+        return ownKeys(o);
+    };
+    return function (mod) {
+        if (mod && mod.__esModule) return mod;
+        var result = {};
+        if (mod != null) for (var k = ownKeys(mod), i = 0; i < k.length; i++) if (k[i] !== "default") __createBinding(result, mod, k[i]);
+        __setModuleDefault(result, mod);
+        return result;
+    };
+})();
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.activate = activate;
+exports.deactivate = deactivate;
+const vscode = __importStar(require("vscode"));
+const path = __importStar(require("path"));
+const fs = __importStar(require("fs"));
+const dotenv_1 = require("dotenv");
+const multi_db_manager_1 = require("./core/multi-db-manager");
+const migration_manager_1 = require("./core/migration-manager");
+const ingestion_orchestrator_1 = require("./services/ingestion-orchestrator");
+const commands_1 = require("./ui/commands");
+const database_explorer_1 = require("./ui/database-explorer");
+const status_provider_1 = require("./ui/status-provider");
+const docs_path_resolver_1 = require("./core/docs-path-resolver");
+/**
+ * Loads .env file from workspace root or parent directories.
+ */
+function loadEnvFile(workspaceRoot) {
+    // Try to find .env file in workspace root or parent directories
+    let currentPath = workspaceRoot;
+    const maxDepth = 5; // Prevent infinite loops
+    for (let depth = 0; depth < maxDepth; depth++) {
+        const envPath = path.join(currentPath, '.env');
+        if (fs.existsSync(envPath)) {
+            (0, dotenv_1.config)({ path: envPath });
+            console.log(`[5D Database Plugin] Loaded .env file from: ${envPath}`);
+            return;
+        }
+        // Try parent directory
+        const parentPath = path.dirname(currentPath);
+        if (parentPath === currentPath) {
+            break; // Reached filesystem root
+        }
+        currentPath = parentPath;
+    }
+    console.warn('[5D Database Plugin] No .env file found. Using environment variables only.');
+}
+/**
+ * Activates the 5D Database Plugin extension.
+ */
+async function activate(context) {
+    const outputChannel = vscode.window.createOutputChannel('5D Database Plugin');
+    try {
+        outputChannel.appendLine('=== 5D Database Plugin Activation Started ===');
+        const workspaceFolders = vscode.workspace.workspaceFolders;
+        outputChannel.appendLine(`Workspace folders: ${workspaceFolders ? workspaceFolders.length : 0}`);
+        // If no workspace folder, try to use extension context storage path as fallback
+        let workspaceRoot;
+        if (!workspaceFolders || workspaceFolders.length === 0) {
+            outputChannel.appendLine('No workspace folder found, trying fallback...');
+            // Fallback: Use extension context storage path parent directory
+            // This allows extension to work even without a workspace folder
+            const storagePath = context.storagePath || context.globalStoragePath;
+            if (storagePath) {
+                // Try to find workspace root by going up from storage path
+                const path = require('path');
+                workspaceRoot = path.dirname(path.dirname(storagePath));
+                outputChannel.appendLine(`Using fallback workspace root: ${workspaceRoot}`);
+            }
+            else {
+                const errorMsg = '5D Database Plugin: No workspace folder found and no storage path available';
+                outputChannel.appendLine(`ERROR: ${errorMsg}`);
+                outputChannel.show(true);
+                vscode.window.showErrorMessage(errorMsg);
+                return;
+            }
+        }
+        else {
+            // Use first workspace folder for database initialization
+            workspaceRoot = workspaceFolders[0].uri.fsPath;
+            outputChannel.appendLine(`Using workspace root: ${workspaceRoot}`);
+        }
+        // Load .env file from workspace root or parent directories
+        outputChannel.appendLine('Loading .env file...');
+        loadEnvFile(workspaceRoot);
+        if (process.env.OPENAI_API_KEY) {
+            outputChannel.appendLine('OpenAI API key loaded from .env file');
+        }
+        else {
+            outputChannel.appendLine('WARNING: OPENAI_API_KEY not found in .env file or environment variables');
+        }
+        // Find docs directory across all workspace folders and parent directories
+        outputChannel.appendLine('Searching for docs/ directory...');
+        const docsPath = docs_path_resolver_1.DocsPathResolver.findDocsDirectory(workspaceFolders);
+        if (!docsPath) {
+            outputChannel.appendLine('WARNING: docs/ directory not found in workspace folders or parent directories.');
+            outputChannel.appendLine('The 5D Database Plugin requires the Documentation System Plugin (Noyrax) to generate docs/ first.');
+            outputChannel.appendLine('Please install and run the Documentation System Plugin to generate documentation.');
+            outputChannel.appendLine('Ingestion will be skipped until docs/ directory is available.');
+            outputChannel.show(true);
+        }
+        else {
+            outputChannel.appendLine(`Found docs/ directory: ${docsPath}`);
+        }
+        outputChannel.appendLine('Initializing database manager...');
+        const dbManager = new multi_db_manager_1.MultiDbManager(workspaceRoot);
+        outputChannel.appendLine('Initializing migration manager...');
+        const migrationManager = new migration_manager_1.MigrationManager(dbManager, context.extensionPath);
+        outputChannel.appendLine('Initializing ingestion orchestrator...');
+        const ingestionOrchestrator = new ingestion_orchestrator_1.IngestionOrchestrator(dbManager, migrationManager, docsPath || undefined);
+        outputChannel.appendLine('Running database migrations...');
+        await migrationManager.migrateAll();
+        outputChannel.appendLine('Database migrations completed');
+        outputChannel.appendLine('Registering UI components...');
+        const statusProvider = new status_provider_1.StatusBarProvider(context, dbManager);
+        const explorerProvider = new database_explorer_1.DatabaseExplorerProvider(context, dbManager);
+        context.subscriptions.push(vscode.window.registerTreeDataProvider('5d-database-explorer', explorerProvider), statusProvider);
+        outputChannel.appendLine('Registering commands...');
+        (0, commands_1.registerCommands)(context, dbManager, ingestionOrchestrator, explorerProvider, docsPath || undefined);
+        outputChannel.appendLine('=== 5D Database Plugin Activation Completed Successfully ===');
+        vscode.window.showInformationMessage('5D Database Plugin activated');
+    }
+    catch (error) {
+        const errorMsg = error instanceof Error ? error.message : String(error);
+        outputChannel.appendLine(`ERROR during activation: ${errorMsg}`);
+        if (error instanceof Error && error.stack) {
+            outputChannel.appendLine(`Stack trace: ${error.stack}`);
+        }
+        outputChannel.show(true);
+        vscode.window.showErrorMessage(`5D Database Plugin activation failed: ${errorMsg}`);
+        console.error('5D Database Plugin activation error:', error);
+    }
+}
+/**
+ * Deactivates the extension.
+ */
+function deactivate() {
+    // Cleanup if needed
+}
+//# sourceMappingURL=extension.js.map

package/out/extension.js.map

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package/out/ingestors/adr-ingestor.d.ts

@@ -0,0 +1,41 @@
+import { BaseIngestor } from './base-ingestor';
+import { Dimension } from '../core/multi-db-manager';
+import { MultiDbManager } from '../core/multi-db-manager';
+/**
+ * Ingests ADRs from docs/adr/*.md (W-Dimension)
+ */
+export declare class AdrIngestor implements BaseIngestor {
+    private dbManager;
+    constructor(dbManager: MultiDbManager);
+    getDimension(): Dimension;
+    ingestFull(workspaceRoot: string, pluginId: string, docsPath: string): Promise<void>;
+    ingestIncremental(workspaceRoot: string, pluginId: string, docsPath: string): Promise<void>;
+    /**
+     * Ingests a single ADR file.
+     */
+    private ingestAdrFile;
+    /**
+     * Extracts ADR number from file name (e.g., "020-api-doc-tiefe.md" -> "020").
+     */
+    private extractAdrNumber;
+    /**
+     * Extracts title from ADR content (first # heading).
+     */
+    private extractTitle;
+    /**
+     * Extracts file path references from ADR content.
+     * Looks for patterns like `src/path/file.ts`, `5d-database-plugin/src/path/file.ts`, or `[file.ts](src/path/file.ts)`.
+     * Normalizes paths to match database format by checking which format exists in the database.
+     */
+    private extractFileMappings;
+    /**
+     * Normalizes a file path to match database format.
+     * Checks if file exists with/without plugin prefix and returns the correct format.
+     */
+    private normalizeFilePath;
+    /**
+     * Computes SHA256 hash of content.
+     */
+    private computeContentHash;
+}
+//# sourceMappingURL=adr-ingestor.d.ts.map

package/out/ingestors/adr-ingestor.d.ts.map

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