@nfdi4plants/arctrl 3.0.0-beta.5 → 3.0.0-beta.6

package/dist/ts/ts/Spreadsheet/Metadata/SparseTable.js

@@ -1,20 +1,40 @@
-import { iterate, indexed, choose, tryPick, map, tryItem, isEmpty, maxBy, length, delay, append as append$1 } from '../../../node_modules/@fable-org/fable-library-js/Seq.js';
-import { value, map as map$1, defaultArg } from '../../../node_modules/@fable-org/fable-library-js/Option.js';
-import { equals, comparePrimitives } from '../../../node_modules/@fable-org/fable-library-js/Util.js';
-import { Record } from '../../../node_modules/@fable-org/fable-library-js/Types.js';
-import { FsAddress } from '../../fable_modules/FsSpreadsheet.7.0.0-alpha.1/FsAddress.fs.js';
-import { exists, find, cons, empty, append, singleton, map as map$2, initialize } from '../../../node_modules/@fable-org/fable-library-js/List.js';
-import { toFail, printf } from '../../../node_modules/@fable-org/fable-library-js/String.js';
+import { indexed, map, choose, initialize, maxBy, tryPick, fold, iterate, isEmpty, length, tryItem, delay, append as append$1 } from '../../../node_modules/@fable-org/fable-library-js/Seq.js';
+import { map as map$1, value, defaultArg } from '../../../node_modules/@fable-org/fable-library-js/Option.js';
+import { ofSeq, tryFind } from '../../../node_modules/@fable-org/fable-library-js/Map.js';
+import { comparePrimitives, equals } from '../../../node_modules/@fable-org/fable-library-js/Util.js';
+import { DataType_String } from '../../fable_modules/FsSpreadsheet.7.0.0-alpha.1/Cells/FsCell.fs.js';
+import { RowBuilder_$ctor, RowBuilder__Combine_19F30600, RowBuilder_get_Empty } from '../../fable_modules/FsSpreadsheet.7.0.0-alpha.1/DSL/RowBuilder.fs.js';
+import { SheetEntity$1_some_2B595, Messages_format, RowElement_UnindexedCell, RowElement_IndexedCell, ColumnIndex } from '../../fable_modules/FsSpreadsheet.7.0.0-alpha.1/DSL/Types.fs.js';
+import { singleton, empty, append, exists, find, cons, initialize as initialize$1, map as map$2 } from '../../../node_modules/@fable-org/fable-library-js/List.js';
+import { CellBuilder__AsCellElement_6F87C2ED, CellBuilder_$ctor } from '../../fable_modules/FsSpreadsheet.7.0.0-alpha.1/DSL/CellBuilder.fs.js';
 import { FsRangeAddress } from '../../fable_modules/FsSpreadsheet.7.0.0-alpha.1/Ranges/FsRangeAddress.fs.js';
-import { Seq_trySkip, Dictionary_tryGetValue } from '../CollectionAux.js';
+import { FsAddress } from '../../fable_modules/FsSpreadsheet.7.0.0-alpha.1/FsAddress.fs.js';
+import { Record } from '../../../node_modules/@fable-org/fable-library-js/Types.js';
+import { record_type, class_type, list_type, int32_type, tuple_type, string_type } from '../../../node_modules/@fable-org/fable-library-js/Reflection.js';
+import { Dictionary_tryGetValue, Seq_trySkip } from '../CollectionAux.js';
 import { getItemFromDict, addToDict } from '../../../node_modules/@fable-org/fable-library-js/MapUtil.js';
 import { Dictionary_init } from '../../Core/Helper/Collections.js';
+import { toFail, printf } from '../../../node_modules/@fable-org/fable-library-js/String.js';
 import { Remark, Comment$ } from '../../Core/Comment.js';
 import { Comment_$007CComment$007C_$007C, Remark_$007CRemark$007C_$007C, Comment_wrapCommentKey } from './Comment.js';
 
 function SparseRowModule_fromValues(v) {
   return indexed(v);
 }
+function SparseRowModule_getValues(i) {
+  return map((tuple) => tuple[1], i);
+}
+function SparseRowModule_fromAllValues(v) {
+  return choose((tupledArg) => map$1((v_1) => [tupledArg[0], v_1], tupledArg[1]), indexed(v));
+}
+function SparseRowModule_getAllValues(i) {
+  const m = ofSeq(i, {
+    Compare: comparePrimitives
+  });
+  return initialize(maxBy((tuple) => tuple[0], i, {
+    Compare: comparePrimitives
+  })[0] + 1, (i_1) => tryFind(i_1, m));
+}
 function SparseRowModule_fromFsRow(r) {
   return choose((c) => {
     if (equals(c.Value, "")) {
@@ -33,6 +53,219 @@ function SparseRowModule_tryGetValueAt(i, vs) {
     }
   }, vs);
 }
+function SparseRowModule_toDSLRow(vs) {
+  const builder$0040 = RowBuilder_$ctor();
+  let this$_9;
+  const ns = map((_arg) => {
+    const v = _arg;
+    if (v == null) {
+      let c_1;
+      const this$_5 = CellBuilder__AsCellElement_6F87C2ED(CellBuilder_$ctor(), SheetEntity$1_some_2B595(singleton([DataType_String(), ""])));
+      let matchResult, errs_1, f_1, ms_2_1;
+      switch (this$_5.tag) {
+        case /* NoneOptional */
+        1: {
+          if (equals(this$_5.fields[0], empty())) {
+            matchResult = 1;
+            ms_2_1 = this$_5.fields[0];
+          } else {
+            matchResult = 2;
+          }
+          break;
+        }
+        case /* NoneRequired */
+        2: {
+          if (equals(this$_5.fields[0], empty())) {
+            matchResult = 1;
+            ms_2_1 = this$_5.fields[0];
+          } else {
+            matchResult = 2;
+          }
+          break;
+        }
+        default: {
+          matchResult = 0;
+          errs_1 = this$_5.fields[1];
+          f_1 = this$_5.fields[0];
+        }
+      }
+      switch (matchResult) {
+        case 0: {
+          c_1 = f_1;
+          break;
+        }
+        case 1: {
+          throw new Error("SheetEntity does not contain Value.");
+          break;
+        }
+        default: {
+          let matchResult_1, ms_3_1;
+          switch (this$_5.tag) {
+            case /* NoneOptional */
+            1: {
+              matchResult_1 = 0;
+              ms_3_1 = this$_5.fields[0];
+              break;
+            }
+            case /* NoneRequired */
+            2: {
+              matchResult_1 = 0;
+              ms_3_1 = this$_5.fields[0];
+              break;
+            }
+            default:
+              matchResult_1 = 1;
+          }
+          switch (matchResult_1) {
+            case 0: {
+              throw new Error(`SheetEntity does not contain Value: 
+	${Messages_format(ms_3_1)}`);
+              break;
+            }
+            default:
+              throw new Error("Match failure: FsSpreadsheet.DSL.SheetEntity`1");
+          }
+        }
+      }
+      return SheetEntity$1_some_2B595(singleton(c_1[1] == null ? RowElement_UnindexedCell(c_1[0]) : RowElement_IndexedCell(new ColumnIndex(value(c_1[1])), c_1[0])));
+    } else {
+      const v_1 = value(v);
+      let c;
+      const this$_2 = CellBuilder__AsCellElement_6F87C2ED(CellBuilder_$ctor(), SheetEntity$1_some_2B595(singleton([DataType_String(), v_1])));
+      let matchResult_2, errs, f, ms_2;
+      switch (this$_2.tag) {
+        case /* NoneOptional */
+        1: {
+          if (equals(this$_2.fields[0], empty())) {
+            matchResult_2 = 1;
+            ms_2 = this$_2.fields[0];
+          } else {
+            matchResult_2 = 2;
+          }
+          break;
+        }
+        case /* NoneRequired */
+        2: {
+          if (equals(this$_2.fields[0], empty())) {
+            matchResult_2 = 1;
+            ms_2 = this$_2.fields[0];
+          } else {
+            matchResult_2 = 2;
+          }
+          break;
+        }
+        default: {
+          matchResult_2 = 0;
+          errs = this$_2.fields[1];
+          f = this$_2.fields[0];
+        }
+      }
+      switch (matchResult_2) {
+        case 0: {
+          c = f;
+          break;
+        }
+        case 1: {
+          throw new Error("SheetEntity does not contain Value.");
+          break;
+        }
+        default: {
+          let matchResult_3, ms_3;
+          switch (this$_2.tag) {
+            case /* NoneOptional */
+            1: {
+              matchResult_3 = 0;
+              ms_3 = this$_2.fields[0];
+              break;
+            }
+            case /* NoneRequired */
+            2: {
+              matchResult_3 = 0;
+              ms_3 = this$_2.fields[0];
+              break;
+            }
+            default:
+              matchResult_3 = 1;
+          }
+          switch (matchResult_3) {
+            case 0: {
+              throw new Error(`SheetEntity does not contain Value: 
+	${Messages_format(ms_3)}`);
+              break;
+            }
+            default:
+              throw new Error("Match failure: FsSpreadsheet.DSL.SheetEntity`1");
+          }
+        }
+      }
+      return SheetEntity$1_some_2B595(singleton(c[1] == null ? RowElement_UnindexedCell(c[0]) : RowElement_IndexedCell(new ColumnIndex(value(c[1])), c[0])));
+    }
+  }, SparseRowModule_getAllValues(vs));
+  this$_9 = fold((state, we) => RowBuilder__Combine_19F30600(builder$0040, state, we), RowBuilder_get_Empty(), ns);
+  let matchResult_4, errs_2, f_3, ms_2_2;
+  switch (this$_9.tag) {
+    case /* NoneOptional */
+    1: {
+      if (equals(this$_9.fields[0], empty())) {
+        matchResult_4 = 1;
+        ms_2_2 = this$_9.fields[0];
+      } else {
+        matchResult_4 = 2;
+      }
+      break;
+    }
+    case /* NoneRequired */
+    2: {
+      if (equals(this$_9.fields[0], empty())) {
+        matchResult_4 = 1;
+        ms_2_2 = this$_9.fields[0];
+      } else {
+        matchResult_4 = 2;
+      }
+      break;
+    }
+    default: {
+      matchResult_4 = 0;
+      errs_2 = this$_9.fields[1];
+      f_3 = this$_9.fields[0];
+    }
+  }
+  switch (matchResult_4) {
+    case 0:
+      return f_3;
+    case 1:
+      throw new Error("SheetEntity does not contain Value.");
+    default: {
+      let matchResult_5, ms_3_2;
+      switch (this$_9.tag) {
+        case /* NoneOptional */
+        1: {
+          matchResult_5 = 0;
+          ms_3_2 = this$_9.fields[0];
+          break;
+        }
+        case /* NoneRequired */
+        2: {
+          matchResult_5 = 0;
+          ms_3_2 = this$_9.fields[0];
+          break;
+        }
+        default:
+          matchResult_5 = 1;
+      }
+      switch (matchResult_5) {
+        case 0:
+          throw new Error(`SheetEntity does not contain Value: 
+	${Messages_format(ms_3_2)}`);
+        default:
+          throw new Error("Match failure: FsSpreadsheet.DSL.SheetEntity`1");
+      }
+    }
+  }
+}
+function SparseRowModule_readFromSheet(sheet) {
+  return map(SparseRowModule_fromFsRow, sheet.Rows);
+}
 function SparseRowModule_writeToSheet(rowI, row, sheet) {
   const fsRow = sheet.RowWithRange(new FsRangeAddress(new FsAddress(rowI, 1), new FsAddress(rowI, 1)), true);
   iterate((tupledArg) => {
@@ -51,6 +284,9 @@ class SparseTable extends Record {
     this.ColumnCount = ColumnCount | 0;
   }
 }
+function SparseTable_$reflection() {
+  return record_type("ARCtrl.Spreadsheet.SparseTable", [], SparseTable, () => [["Matrix", class_type("System.Collections.Generic.Dictionary`2", [tuple_type(string_type, int32_type), string_type])], ["Keys", list_type(string_type)], ["CommentKeys", list_type(string_type)], ["ColumnCount", int32_type]]);
+}
 function SparseTable__TryGetValue_11FD62A8(this$, key) {
   return Dictionary_tryGetValue(key, this$.Matrix);
 }
@@ -183,11 +419,11 @@ function SparseTable_FromRows_Z5579EC29(en, labels, lineNumber, prefix) {
 }
 function SparseTable_ToRows_759CAFC1(matrix, prefix) {
   const prefix_1 = prefix == null ? "" : value(prefix) + " ";
-  return delay(() => append$1(map((key) => SparseRowModule_fromValues(cons(prefix_1 + key, initialize(matrix.ColumnCount - 1, (i) => SparseTable__TryGetValueDefault_5BAE6133(matrix, "", [key, i + 1])))), matrix.Keys), delay(() => map((key_1) => SparseRowModule_fromValues(cons(Comment_wrapCommentKey(key_1), initialize(matrix.ColumnCount - 1, (i_1) => SparseTable__TryGetValueDefault_5BAE6133(matrix, "", [key_1, i_1 + 1])))), matrix.CommentKeys))));
+  return delay(() => append$1(map((key) => SparseRowModule_fromValues(cons(prefix_1 + key, initialize$1(matrix.ColumnCount - 1, (i) => SparseTable__TryGetValueDefault_5BAE6133(matrix, "", [key, i + 1])))), matrix.Keys), delay(() => map((key_1) => SparseRowModule_fromValues(cons(Comment_wrapCommentKey(key_1), initialize$1(matrix.ColumnCount - 1, (i_1) => SparseTable__TryGetValueDefault_5BAE6133(matrix, "", [key_1, i_1 + 1])))), matrix.CommentKeys))));
 }
 function SparseTable_GetEmptyComments_3ECCA699(matrix) {
   const collection = map$2((key) => Comment$.create(key), matrix.CommentKeys);
   return Array.from(collection);
 }
 
-export { SparseRowModule_fromFsRow, SparseRowModule_fromValues, SparseRowModule_tryGetValueAt, SparseRowModule_writeToSheet, SparseTable, SparseTable_AddComment, SparseTable_AddEmptyComment, SparseTable_AddRow, SparseTable_Create_Z2192E64B, SparseTable_FromRows_Z5579EC29, SparseTable_GetEmptyComments_3ECCA699, SparseTable_ToRows_759CAFC1, SparseTable__TryGetValueDefault_5BAE6133, SparseTable__TryGetValue_11FD62A8 };
+export { SparseRowModule_fromAllValues, SparseRowModule_fromFsRow, SparseRowModule_fromValues, SparseRowModule_getAllValues, SparseRowModule_getValues, SparseRowModule_readFromSheet, SparseRowModule_toDSLRow, SparseRowModule_tryGetValueAt, SparseRowModule_writeToSheet, SparseTable, SparseTable_$reflection, SparseTable_AddComment, SparseTable_AddEmptyComment, SparseTable_AddRow, SparseTable_Create_Z2192E64B, SparseTable_FromRows_Z5579EC29, SparseTable_GetEmptyComments_3ECCA699, SparseTable_ToRows_759CAFC1, SparseTable__TryGetValueDefault_5BAE6133, SparseTable__TryGetValue_11FD62A8 };

package/dist/ts/ts/Spreadsheet/Metadata/Study.js

@@ -1,13 +1,14 @@
 import { Record } from '../../../node_modules/@fable-org/fable-library-js/Types.js';
-import { ofSeq, empty, append, ofArray, map, cons, reverse } from '../../../node_modules/@fable-org/fable-library-js/List.js';
-import { defaultArg, value } from '../../../node_modules/@fable-org/fable-library-js/Option.js';
+import { ofArray, map, empty, cons, reverse, append, ofSeq } from '../../../node_modules/@fable-org/fable-library-js/List.js';
+import { Comment$_$reflection } from '../../Core/Comment.js';
 import { stringHash } from '../../../node_modules/@fable-org/fable-library-js/Util.js';
-import { collect, delay, append as append$1, singleton } from '../../../node_modules/@fable-org/fable-library-js/Seq.js';
+import { record_type, string_type, list_type } from '../../../node_modules/@fable-org/fable-library-js/Reflection.js';
 import { Comment_fromString, Comment_toString } from './Comment.js';
-import { SparseTable_FromRows_Z5579EC29, SparseTable__TryGetValueDefault_5BAE6133, SparseTable_ToRows_759CAFC1, SparseTable_Create_Z2192E64B, SparseTable, SparseRowModule_fromValues } from './SparseTable.js';
+import { SparseTable__TryGetValueDefault_5BAE6133, SparseTable_Create_Z2192E64B, SparseTable, SparseTable_FromRows_Z5579EC29, SparseTable_ToRows_759CAFC1, SparseRowModule_fromValues } from './SparseTable.js';
 import { createMissingIdentifier, Study_fileNameFromIdentifier } from '../../Core/Helper/Identifier.js';
 import { addToDict } from '../../../node_modules/@fable-org/fable-library-js/MapUtil.js';
-import { Option_fromValueWithDefault, ResizeArray_iter } from '../../Core/Helper/Collections.js';
+import { defaultArg, value } from '../../../node_modules/@fable-org/fable-library-js/Option.js';
+import { ResizeArray_iter, Option_fromValueWithDefault } from '../../Core/Helper/Collections.js';
 import { List_distinct } from '../../../node_modules/@fable-org/fable-library-js/Seq2.js';
 import { ArcStudy } from '../../Core/ArcTypes.js';
 import { fromRows as fromRows$6, toRows as toRows$1 } from './DesignDescriptors.js';
@@ -16,6 +17,7 @@ import { fromRows as fromRows$4, toRows as toRows$3 } from './Factors.js';
 import { fromRows as fromRows$3, toRows as toRows$4 } from './Assays.js';
 import { fromRows as fromRows$2, toRows as toRows$5 } from './Protocols.js';
 import { fromRows as fromRows$1, toRows as toRows$6 } from './Contacts.js';
+import { collect, delay, append as append$1, singleton } from '../../../node_modules/@fable-org/fable-library-js/Seq.js';
 import { ARCtrl_ArcTable__ArcTable_GetProtocols, ARCtrl_ArcTable__ArcTable_GetProcesses } from '../../Core/Conversion.js';
 import { getFactors } from '../../Core/Process/ProcessSequence.js';
 
@@ -31,6 +33,9 @@ class StudyInfo extends Record {
     this.Comments = Comments;
   }
 }
+function StudyInfo_$reflection() {
+  return record_type("ARCtrl.Spreadsheet.Studies.StudyInfo", [], StudyInfo, () => [["Identifier", string_type], ["Title", string_type], ["Description", string_type], ["SubmissionDate", string_type], ["PublicReleaseDate", string_type], ["FileName", string_type], ["Comments", list_type(Comment$_$reflection())]]);
+}
 function StudyInfo_create(identifier, title, description, submissionDate, publicReleaseDate, fileName, comments) {
   return new StudyInfo(identifier, title, description, submissionDate, publicReleaseDate, fileName, comments);
 }
@@ -93,37 +98,37 @@ function fromRows(lineNumber, en) {
     loop:
       while (true) {
         const lastLine = lastLine_mut, studyInfo = studyInfo_mut, designDescriptors = designDescriptors_mut, publications = publications_mut, factors = factors_mut, assays = assays_mut, protocols = protocols_mut, contacts = contacts_mut, remarks = remarks_mut, lineNumber_1 = lineNumber_1_mut;
-        let matchResult, k_12;
+        let matchResult, k_6, k_7, k_8, k_9, k_10, k_11, k_12;
         if (lastLine != null) {
           switch (value(lastLine)) {
             case "STUDY DESIGN DESCRIPTORS": {
               matchResult = 0;
-              value(lastLine);
+              k_6 = value(lastLine);
               break;
             }
             case "STUDY PUBLICATIONS": {
               matchResult = 1;
-              value(lastLine);
+              k_7 = value(lastLine);
               break;
             }
             case "STUDY FACTORS": {
               matchResult = 2;
-              value(lastLine);
+              k_8 = value(lastLine);
               break;
             }
             case "STUDY ASSAYS": {
               matchResult = 3;
-              value(lastLine);
+              k_9 = value(lastLine);
               break;
             }
             case "STUDY PROTOCOLS": {
               matchResult = 4;
-              value(lastLine);
+              k_10 = value(lastLine);
               break;
             }
             case "STUDY CONTACTS": {
               matchResult = 5;
-              value(lastLine);
+              k_11 = value(lastLine);
               break;
             }
             default: {
@@ -223,6 +228,7 @@ function fromRows(lineNumber, en) {
           default:
             return [k_12, lineNumber_1, remarks, fromParts(studyInfo, designDescriptors, publications, factors, assays, protocols, contacts)];
         }
+        break;
       }
   };
   const patternInput_6 = StudyInfo_fromRows(lineNumber, en);
@@ -235,4 +241,4 @@ function toRows(study, assays) {
   return delay(() => append$1(StudyInfo_toRows_1680536E(study), delay(() => append$1(singleton(SparseRowModule_fromValues(["STUDY DESIGN DESCRIPTORS"])), delay(() => append$1(toRows$1("Study Design", ofSeq(study.StudyDesignDescriptors)), delay(() => append$1(singleton(SparseRowModule_fromValues(["STUDY PUBLICATIONS"])), delay(() => append$1(toRows$2("Study Publication", ofSeq(study.Publications)), delay(() => append$1(singleton(SparseRowModule_fromValues(["STUDY FACTORS"])), delay(() => append$1(toRows$3("Study Factor", factors), delay(() => append$1(singleton(SparseRowModule_fromValues(["STUDY ASSAYS"])), delay(() => append$1(toRows$4("Study Assay", assays_1), delay(() => append$1(singleton(SparseRowModule_fromValues(["STUDY PROTOCOLS"])), delay(() => append$1(toRows$5("Study Protocol", protocols), delay(() => append$1(singleton(SparseRowModule_fromValues(["STUDY CONTACTS"])), delay(() => toRows$6("Study Person", ofSeq(study.Contacts)))))))))))))))))))))))))));
 }
 
-export { StudyInfo, StudyInfo_FromSparseTable_3ECCA699, StudyInfo_ToSparseTable_1680536E, StudyInfo_create, StudyInfo_fromRows, StudyInfo_get_Labels, StudyInfo_toRows_1680536E, fromParts, fromRows, toRows };
+export { StudyInfo, StudyInfo_$reflection, StudyInfo_FromSparseTable_3ECCA699, StudyInfo_ToSparseTable_1680536E, StudyInfo_create, StudyInfo_fromRows, StudyInfo_get_Labels, StudyInfo_toRows_1680536E, fromParts, fromRows, toRows };

package/dist/ts/ts/Spreadsheet/Metadata/Workflow.js

@@ -1,13 +1,13 @@
-import { ofArray, map, empty, ofSeq, cons, reverse } from '../../../node_modules/@fable-org/fable-library-js/List.js';
+import { ofArray, map as map$1, empty, ofSeq, cons, reverse } from '../../../node_modules/@fable-org/fable-library-js/List.js';
 import { value, unwrap, defaultArg } from '../../../node_modules/@fable-org/fable-library-js/Option.js';
-import { map as map$1 } from '../../../node_modules/@fable-org/fable-library-js/Seq.js';
+import { map } from '../../../node_modules/@fable-org/fable-library-js/Seq.js';
 import { OntologyAnnotation } from '../../Core/OntologyAnnotation.js';
 import { Option_fromValueWithDefault, ResizeArray_iter } from '../../Core/Helper/Collections.js';
 import { ProtocolParameter_fromAggregatedStrings, Component_fromAggregatedStrings, ProtocolParameter_toAggregatedStrings, Component_toAggregatedStrings } from './Conversions.js';
 import { ArcWorkflow_make, ArcWorkflow__get_Identifier, ArcWorkflow__get_WorkflowType, ArcWorkflow__get_Parameters, ArcWorkflow__get_Components, ArcWorkflow__get_SubWorkflowIdentifiers, ArcWorkflow__get_Title, ArcWorkflow__get_Description, ArcWorkflow__get_URI, ArcWorkflow__get_Version, ArcWorkflow__get_Comments } from '../../Core/ArcTypes.js';
 import { createMissingIdentifier, Workflow_tryIdentifierFromFileName, Workflow_fileNameFromIdentifier } from '../../Core/Helper/Identifier.js';
 import { Comment_fromString, Comment_toString } from './Comment.js';
-import { SparseTable_FromRows_Z5579EC29, SparseTable__TryGetValueDefault_5BAE6133, SparseTable__TryGetValue_11FD62A8, SparseTable_ToRows_759CAFC1, SparseTable_Create_Z2192E64B, SparseTable } from './SparseTable.js';
+import { SparseTable__TryGetValueDefault_5BAE6133, SparseTable__TryGetValue_11FD62A8, SparseTable_Create_Z2192E64B, SparseTable, SparseTable_FromRows_Z5579EC29, SparseTable_ToRows_759CAFC1 } from './SparseTable.js';
 import { join } from '../../../node_modules/@fable-org/fable-library-js/String.js';
 import { addToDict } from '../../../node_modules/@fable-org/fable-library-js/MapUtil.js';
 import { List_distinct } from '../../../node_modules/@fable-org/fable-library-js/Seq2.js';
@@ -38,7 +38,7 @@ function fromString(identifier, title, description, workflowType, workflowTypeTe
     subworkflowIdentifiers_2 = [];
   } else {
     const subworkflowIdentifiers_1 = value(subworkflowIdentifiers);
-    const collection = map$1((s) => s.trim(), subworkflowIdentifiers_1.split(";"));
+    const collection = map((s) => s.trim(), subworkflowIdentifiers_1.split(";"));
     subworkflowIdentifiers_2 = Array.from(collection);
   }
   let workflowType_1;
@@ -53,7 +53,7 @@ function fromString(identifier, title, description, workflowType, workflowTypeTe
   return ArcWorkflow_make(identifier == null ? fileName == null ? createMissingIdentifier() : (matchValue = Workflow_tryIdentifierFromFileName(value(fileName)), matchValue != null ? value(matchValue) : createMissingIdentifier()) : value(identifier), title, description, workflowType_1, uri, version, subworkflowIdentifiers_2, parameters, components, void 0, [], comments);
 }
 function fromSparseTable(matrix) {
-  const comments = map((k) => Comment_fromString(k, SparseTable__TryGetValueDefault_5BAE6133(matrix, "", [k, 0])), matrix.CommentKeys);
+  const comments = map$1((k) => Comment_fromString(k, SparseTable__TryGetValueDefault_5BAE6133(matrix, "", [k, 0])), matrix.CommentKeys);
   return fromString(SparseTable__TryGetValue_11FD62A8(matrix, [identifierLabel, 0]), SparseTable__TryGetValue_11FD62A8(matrix, [titleLabel, 0]), SparseTable__TryGetValue_11FD62A8(matrix, [descriptionLabel, 0]), SparseTable__TryGetValue_11FD62A8(matrix, [workflowTypeLabel, 0]), SparseTable__TryGetValue_11FD62A8(matrix, [typeTermAccessionNumberLabel, 0]), SparseTable__TryGetValue_11FD62A8(matrix, [typeTermSourceREFLabel, 0]), SparseTable__TryGetValue_11FD62A8(matrix, [subWorkflowIdentifiersLabel, 0]), SparseTable__TryGetValue_11FD62A8(matrix, [uriLabel, 0]), SparseTable__TryGetValue_11FD62A8(matrix, [versionLabel, 0]), SparseTable__TryGetValueDefault_5BAE6133(matrix, "", [parametersNameLabel, 0]), SparseTable__TryGetValueDefault_5BAE6133(matrix, "", [parametersTermAccessionNumberLabel, 0]), SparseTable__TryGetValueDefault_5BAE6133(matrix, "", [parametersTermSourceREFLabel, 0]), SparseTable__TryGetValueDefault_5BAE6133(matrix, "", [componentsNameLabel, 0]), SparseTable__TryGetValueDefault_5BAE6133(matrix, "", [componentsTypeLabel, 0]), SparseTable__TryGetValueDefault_5BAE6133(matrix, "", [componentsTypeTermAccessionNumberLabel, 0]), SparseTable__TryGetValueDefault_5BAE6133(matrix, "", [componentsTypeTermSourceREFLabel, 0]), SparseTable__TryGetValue_11FD62A8(matrix, [fileNameLabel, 0]), Array.from(comments));
 }
 function toSparseTable(workflow) {

package/dist/ts/ts/Template.Web.js

@@ -3,6 +3,7 @@ import { singleton } from '../node_modules/@fable-org/fable-library-js/AsyncBuil
 import { downloadFile } from './WebRequest/WebRequest.js';
 import { Templates_fromJsonString } from './JsonIO/Table/Templates.js';
 import { startAsPromise } from '../node_modules/@fable-org/fable-library-js/Async.js';
+import { class_type } from '../node_modules/@fable-org/fable-library-js/Reflection.js';
 
 function getTemplates(url) {
   const url_1 = defaultArg(url, "https://github.com/nfdi4plants/Swate-templates/releases/download/latest/templates_v2.0.0.json");
@@ -18,5 +19,8 @@ class WebController {
     return startAsPromise(singleton.Delay(() => singleton.Bind(getTemplates(url), (_arg) => singleton.Return(_arg))));
   }
 }
+function WebController_$reflection() {
+  return class_type("ARCtrl.Template.Web.WebController", void 0, WebController);
+}
 
-export { WebController, getTemplates };
+export { WebController, WebController_$reflection, getTemplates };

package/dist/ts/ts/ValidationPackages/ValidationPackage.js

@@ -3,6 +3,7 @@ import { join } from '../../node_modules/@fable-org/fable-library-js/String.js';
 import { toList, delay, append, singleton, empty } from '../../node_modules/@fable-org/fable-library-js/Seq.js';
 import { equals, stringHash } from '../../node_modules/@fable-org/fable-library-js/Util.js';
 import { boxHashArray, boxHashOption } from '../Core/Helper/HashCodes.js';
+import { class_type } from '../../node_modules/@fable-org/fable-library-js/Reflection.js';
 
 class ValidationPackage {
   constructor(name, version) {
@@ -49,5 +50,11 @@ class ValidationPackage {
     return boxHashArray([stringHash(this$.Name), boxHashOption(this$.Version)]) | 0;
   }
 }
+function ValidationPackage_$reflection() {
+  return class_type("ARCtrl.ValidationPackages.ValidationPackage", void 0, ValidationPackage);
+}
+function ValidationPackage_$ctor_27AED5E3(name, version) {
+  return new ValidationPackage(name, version);
+}
 
-export { ValidationPackage };
+export { ValidationPackage, ValidationPackage_$ctor_27AED5E3, ValidationPackage_$reflection };

package/dist/ts/ts/ValidationPackages/ValidationPackagesConfig.js

@@ -1,11 +1,12 @@
 import { unwrap, value } from '../../node_modules/@fable-org/fable-library-js/Option.js';
 import { join } from '../../node_modules/@fable-org/fable-library-js/String.js';
-import { toList, delay, append, fold, length, map, item, singleton, empty } from '../../node_modules/@fable-org/fable-library-js/Seq.js';
+import { toList, delay, append, singleton, empty, map, fold, length, item } from '../../node_modules/@fable-org/fable-library-js/Seq.js';
 import { toString } from '../../node_modules/@fable-org/fable-library-js/Types.js';
 import { sortBy } from '../../node_modules/@fable-org/fable-library-js/Array.js';
-import { equals, compareArrays } from '../../node_modules/@fable-org/fable-library-js/Util.js';
+import { compareArrays, equals } from '../../node_modules/@fable-org/fable-library-js/Util.js';
 import { rangeDouble } from '../../node_modules/@fable-org/fable-library-js/Range.js';
 import { boxHashArray, boxHashOption, boxHashSeq } from '../Core/Helper/HashCodes.js';
+import { class_type } from '../../node_modules/@fable-org/fable-library-js/Reflection.js';
 
 class ValidationPackagesConfig {
   constructor(validation_packages, arc_specification) {
@@ -74,5 +75,11 @@ class ValidationPackagesConfig {
     return boxHashArray([boxHashOption(this$.ARCSpecification), boxHashSeq(this$.ValidationPackages)]) | 0;
   }
 }
+function ValidationPackagesConfig_$reflection() {
+  return class_type("ARCtrl.ValidationPackages.ValidationPackagesConfig", void 0, ValidationPackagesConfig);
+}
+function ValidationPackagesConfig_$ctor_376974AD(validation_packages, arc_specification) {
+  return new ValidationPackagesConfig(validation_packages, arc_specification);
+}
 
-export { ValidationPackagesConfig };
+export { ValidationPackagesConfig, ValidationPackagesConfig_$ctor_376974AD, ValidationPackagesConfig_$reflection };

package/dist/ts/ts/WebRequest/WebRequest.Node.js

@@ -4,6 +4,7 @@ import { empty } from '../../node_modules/@fable-org/fable-library-js/List.js';
 
 function isNode() {
   return typeof process !== "undefined" && process.versions != null && process.versions.node != null;
+  ;
 }
 function downloadFile(url) {
   let pr_1, pr;

package/dist/ts/ts/Xlsx.js

@@ -1,6 +1,7 @@
 import { fromFsWorkbook, toFsWorkbook } from './Spreadsheet/DataMap.js';
 import { map } from './CrossAsync.js';
 import { FsSpreadsheet_FsWorkbook__FsWorkbook_fromXlsxFile_Static_Z721C83C5, FsSpreadsheet_FsWorkbook__FsWorkbook_toXlsxFile_Static } from './fable_modules/FsSpreadsheet.Js.7.0.0-alpha.1/FsExtensions.fs.js';
+import { class_type } from '../node_modules/@fable-org/fable-library-js/Reflection.js';
 import { ARCtrl_ArcAssay__ArcAssay_fromFsWorkbook_Static_32154C9D, ARCtrl_ArcAssay__ArcAssay_toFsWorkbook_Static_Z2508BE4F } from './Spreadsheet/ArcAssay.js';
 import { ARCtrl_ArcStudy__ArcStudy_fromFsWorkbook_Static_32154C9D, ARCtrl_ArcStudy__ArcStudy_toFsWorkbook_Static_Z4CEFA522 } from './Spreadsheet/ArcStudy.js';
 import { ofSeq } from '../node_modules/@fable-org/fable-library-js/List.js';
@@ -25,6 +26,12 @@ class XlsxHelper_DatamapXlsx {
     return FsSpreadsheet_FsWorkbook__FsWorkbook_toXlsxFile_Static(path, toFsWorkbook(datamap));
   }
 }
+function XlsxHelper_DatamapXlsx_$reflection() {
+  return class_type("ARCtrl.XlsxHelper.DatamapXlsx", void 0, XlsxHelper_DatamapXlsx);
+}
+function XlsxHelper_DatamapXlsx_$ctor() {
+  return new XlsxHelper_DatamapXlsx();
+}
 class XlsxHelper_AssayXlsx {
   constructor() {
   }
@@ -41,6 +48,12 @@ class XlsxHelper_AssayXlsx {
     return FsSpreadsheet_FsWorkbook__FsWorkbook_toXlsxFile_Static(path, ARCtrl_ArcAssay__ArcAssay_toFsWorkbook_Static_Z2508BE4F(assay));
   }
 }
+function XlsxHelper_AssayXlsx_$reflection() {
+  return class_type("ARCtrl.XlsxHelper.AssayXlsx", void 0, XlsxHelper_AssayXlsx);
+}
+function XlsxHelper_AssayXlsx_$ctor() {
+  return new XlsxHelper_AssayXlsx();
+}
 class XlsxHelper_StudyXlsx {
   constructor() {
   }
@@ -57,6 +70,12 @@ class XlsxHelper_StudyXlsx {
     return FsSpreadsheet_FsWorkbook__FsWorkbook_toXlsxFile_Static(path, ARCtrl_ArcStudy__ArcStudy_toFsWorkbook_Static_Z4CEFA522(study, unwrap(map$1(ofSeq, assays))));
   }
 }
+function XlsxHelper_StudyXlsx_$reflection() {
+  return class_type("ARCtrl.XlsxHelper.StudyXlsx", void 0, XlsxHelper_StudyXlsx);
+}
+function XlsxHelper_StudyXlsx_$ctor() {
+  return new XlsxHelper_StudyXlsx();
+}
 class XlsxHelper_WorkflowXlsx {
   constructor() {
   }
@@ -73,6 +92,12 @@ class XlsxHelper_WorkflowXlsx {
     return FsSpreadsheet_FsWorkbook__FsWorkbook_toXlsxFile_Static(path, ARCtrl_ArcWorkflow__ArcWorkflow_toFsWorkbook_Static_Z1C75CB0E(workflow));
   }
 }
+function XlsxHelper_WorkflowXlsx_$reflection() {
+  return class_type("ARCtrl.XlsxHelper.WorkflowXlsx", void 0, XlsxHelper_WorkflowXlsx);
+}
+function XlsxHelper_WorkflowXlsx_$ctor() {
+  return new XlsxHelper_WorkflowXlsx();
+}
 class XlsxHelper_RunXlsx {
   constructor() {
   }
@@ -89,6 +114,12 @@ class XlsxHelper_RunXlsx {
     return FsSpreadsheet_FsWorkbook__FsWorkbook_toXlsxFile_Static(path, ARCtrl_ArcRun__ArcRun_toFsWorkbook_Static_Z3EFAF6F8(run));
   }
 }
+function XlsxHelper_RunXlsx_$reflection() {
+  return class_type("ARCtrl.XlsxHelper.RunXlsx", void 0, XlsxHelper_RunXlsx);
+}
+function XlsxHelper_RunXlsx_$ctor() {
+  return new XlsxHelper_RunXlsx();
+}
 class XlsxHelper_InvestigationXlsx {
   constructor() {
   }
@@ -105,6 +136,12 @@ class XlsxHelper_InvestigationXlsx {
     return FsSpreadsheet_FsWorkbook__FsWorkbook_toXlsxFile_Static(path, ARCtrl_ArcInvestigation__ArcInvestigation_toFsWorkbook_Static_Z720BD3FF(investigation));
   }
 }
+function XlsxHelper_InvestigationXlsx_$reflection() {
+  return class_type("ARCtrl.XlsxHelper.InvestigationXlsx", void 0, XlsxHelper_InvestigationXlsx);
+}
+function XlsxHelper_InvestigationXlsx_$ctor() {
+  return new XlsxHelper_InvestigationXlsx();
+}
 class XlsxController {
   constructor() {
   }
@@ -127,5 +164,8 @@ class XlsxController {
     return new XlsxHelper_InvestigationXlsx();
   }
 }
+function XlsxController_$reflection() {
+  return class_type("ARCtrl.XlsxController", void 0, XlsxController);
+}
 
-export { XlsxController, XlsxHelper_AssayXlsx, XlsxHelper_DatamapXlsx, XlsxHelper_InvestigationXlsx, XlsxHelper_RunXlsx, XlsxHelper_StudyXlsx, XlsxHelper_WorkflowXlsx };
+export { XlsxController, XlsxController_$reflection, XlsxHelper_AssayXlsx, XlsxHelper_AssayXlsx_$ctor, XlsxHelper_AssayXlsx_$reflection, XlsxHelper_DatamapXlsx, XlsxHelper_DatamapXlsx_$ctor, XlsxHelper_DatamapXlsx_$reflection, XlsxHelper_InvestigationXlsx, XlsxHelper_InvestigationXlsx_$ctor, XlsxHelper_InvestigationXlsx_$reflection, XlsxHelper_RunXlsx, XlsxHelper_RunXlsx_$ctor, XlsxHelper_RunXlsx_$reflection, XlsxHelper_StudyXlsx, XlsxHelper_StudyXlsx_$ctor, XlsxHelper_StudyXlsx_$reflection, XlsxHelper_WorkflowXlsx, XlsxHelper_WorkflowXlsx_$ctor, XlsxHelper_WorkflowXlsx_$reflection };

package/dist/ts/ts/Yaml/ValidationPackage.js

@@ -1,11 +1,14 @@
 import { choose, ofArray } from '../../node_modules/@fable-org/fable-library-js/List.js';
-import { YAMLElement_Nil, YAMLElement_Object, YAMLElement_Mapping, YAMLContent_create_27AED5E3 } from '../fable_modules/YAMLicious.0.0.3/YAMLiciousTypes.fs.js';
+import { YAMLElement_Nil, YAMLElement_Object, YAMLElement_Mapping, YAMLContent_create_27AED5E3, Config } from '../fable_modules/YAMLicious.0.0.3/YAMLiciousTypes.fs.js';
 import { equals } from '../../node_modules/@fable-org/fable-library-js/Util.js';
 import { unwrap } from '../../node_modules/@fable-org/fable-library-js/Option.js';
 import { string, tryInclude } from '../fable_modules/YAMLicious.0.0.3/Encode.fs.js';
 import { toList, delay, collect, singleton } from '../../node_modules/@fable-org/fable-library-js/Seq.js';
 import { ValidationPackage } from '../ValidationPackages/ValidationPackage.js';
 import { object, string as string$1 } from '../fable_modules/YAMLicious.0.0.3/Decode.fs.js';
+import { read } from '../fable_modules/YAMLicious.0.0.3/Reader.fs.js';
+import { defaultWhitespace } from './Encode.js';
+import { write } from '../fable_modules/YAMLicious.0.0.3/Writer.fs.js';
 
 function ValidationPackage_encoder(validationpackage) {
   const objSeq = choose((tupledArg) => {
@@ -22,5 +25,18 @@ const ValidationPackage_decoder = (value_2) => object((get$) => {
   let objectArg, objectArg_1;
   return new ValidationPackage((objectArg = get$.Required, objectArg.Field("name", string$1)), unwrap((objectArg_1 = get$.Optional, objectArg_1.Field("version", string$1))));
 }, value_2);
+function ARCtrl_ValidationPackages_ValidationPackage__ValidationPackage_fromYamlString_Static_Z721C83C5(s) {
+  return ValidationPackage_decoder(read(s));
+}
+function ARCtrl_ValidationPackages_ValidationPackage__ValidationPackage_toYamlString_Static_71136F3F(whitespace) {
+  return (vp) => {
+    const element = ValidationPackage_encoder(vp);
+    const whitespace_1 = defaultWhitespace(whitespace) | 0;
+    return write(element, (c) => new Config(whitespace_1, c.Level));
+  };
+}
+function ARCtrl_ValidationPackages_ValidationPackage__ValidationPackage_toYamlString_71136F3F(this$, whitespace) {
+  return ARCtrl_ValidationPackages_ValidationPackage__ValidationPackage_toYamlString_Static_71136F3F(unwrap(whitespace))(this$);
+}
 
-export { ValidationPackage_decoder, ValidationPackage_encoder };
+export { ARCtrl_ValidationPackages_ValidationPackage__ValidationPackage_fromYamlString_Static_Z721C83C5, ARCtrl_ValidationPackages_ValidationPackage__ValidationPackage_toYamlString_71136F3F, ARCtrl_ValidationPackages_ValidationPackage__ValidationPackage_toYamlString_Static_71136F3F, ValidationPackage_decoder, ValidationPackage_encoder };