@nfdi4plants/arctrl 3.0.0-beta.5 → 3.0.0-beta.6
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/ts/node_modules/@fable-org/fable-library-js/Array.js +894 -4
- package/dist/ts/node_modules/@fable-org/fable-library-js/Async.js +121 -3
- package/dist/ts/node_modules/@fable-org/fable-library-js/BigInt.js +279 -1
- package/dist/ts/node_modules/@fable-org/fable-library-js/Char.js +101 -2
- package/dist/ts/node_modules/@fable-org/fable-library-js/Choice.js +187 -0
- package/dist/ts/node_modules/@fable-org/fable-library-js/CollectionUtil.js +156 -2
- package/dist/ts/node_modules/@fable-org/fable-library-js/Date.js +183 -7
- package/dist/ts/node_modules/@fable-org/fable-library-js/DateOffset.js +217 -5
- package/dist/ts/node_modules/@fable-org/fable-library-js/Decimal.js +154 -5
- package/dist/ts/node_modules/@fable-org/fable-library-js/Double.js +20 -1
- package/dist/ts/node_modules/@fable-org/fable-library-js/FSharp.Collections.js +30 -0
- package/dist/ts/node_modules/@fable-org/fable-library-js/FSharp.Core.js +68 -1
- package/dist/ts/node_modules/@fable-org/fable-library-js/Global.js +6 -1
- package/dist/ts/node_modules/@fable-org/fable-library-js/Guid.js +98 -1
- package/dist/ts/node_modules/@fable-org/fable-library-js/Int32.js +18 -1
- package/dist/ts/node_modules/@fable-org/fable-library-js/List.js +601 -5
- package/dist/ts/node_modules/@fable-org/fable-library-js/Long.js +10 -1
- package/dist/ts/node_modules/@fable-org/fable-library-js/Map.js +760 -16
- package/dist/ts/node_modules/@fable-org/fable-library-js/MapUtil.js +26 -1
- package/dist/ts/node_modules/@fable-org/fable-library-js/MutableMap.js +18 -8
- package/dist/ts/node_modules/@fable-org/fable-library-js/MutableSet.js +36 -4
- package/dist/ts/node_modules/@fable-org/fable-library-js/Option.js +35 -1
- package/dist/ts/node_modules/@fable-org/fable-library-js/Range.js +26 -1
- package/dist/ts/node_modules/@fable-org/fable-library-js/Reflection.js +355 -1
- package/dist/ts/node_modules/@fable-org/fable-library-js/RegExp.js +21 -2
- package/dist/ts/node_modules/@fable-org/fable-library-js/Result.js +133 -1
- package/dist/ts/node_modules/@fable-org/fable-library-js/Seq.js +543 -8
- package/dist/ts/node_modules/@fable-org/fable-library-js/Seq2.js +53 -4
- package/dist/ts/node_modules/@fable-org/fable-library-js/Set.js +673 -41
- package/dist/ts/node_modules/@fable-org/fable-library-js/String.js +197 -4
- package/dist/ts/node_modules/@fable-org/fable-library-js/System.Text.js +128 -3
- package/dist/ts/node_modules/@fable-org/fable-library-js/SystemException.js +8 -0
- package/dist/ts/node_modules/@fable-org/fable-library-js/TimeSpan.js +180 -0
- package/dist/ts/node_modules/@fable-org/fable-library-js/Types.js +20 -2
- package/dist/ts/node_modules/@fable-org/fable-library-js/Util.js +406 -2
- package/dist/ts/node_modules/@fable-org/fable-library-js/lib/big.js +2 -2
- package/dist/ts/ts/ARC.d.ts +12 -5
- package/dist/ts/ts/ARC.d.ts.map +1 -1
- package/dist/ts/ts/ARC.js +172 -93
- package/dist/ts/ts/Contract/ARC.d.ts.map +1 -1
- package/dist/ts/ts/Contract/ARC.js +8 -1
- package/dist/ts/ts/Contract/ArcAssay.js +14 -5
- package/dist/ts/ts/Contract/ArcInvestigation.js +10 -1
- package/dist/ts/ts/Contract/ArcRun.js +19 -6
- package/dist/ts/ts/Contract/ArcStudy.js +19 -6
- package/dist/ts/ts/Contract/ArcWorkflow.js +19 -6
- package/dist/ts/ts/Contract/Contract.js +42 -1
- package/dist/ts/ts/Contract/Datamap.js +61 -17
- package/dist/ts/ts/Contract/Git.d.ts.map +1 -1
- package/dist/ts/ts/Contract/Git.js +22 -6
- package/dist/ts/ts/Contract/License.d.ts +5 -0
- package/dist/ts/ts/Contract/License.d.ts.map +1 -0
- package/dist/ts/ts/Contract/License.js +34 -0
- package/dist/ts/ts/Contract/ValidationPackagesConfig.js +31 -6
- package/dist/ts/ts/ContractIO/ContractIO.js +5 -5
- package/dist/ts/ts/ContractIO/FileSystemHelper.js +16 -4
- package/dist/ts/ts/Conversion.js +321 -48
- package/dist/ts/ts/Core/ArcTypes.js +216 -15
- package/dist/ts/ts/Core/Comment.js +11 -1
- package/dist/ts/ts/Core/CommentList.js +77 -2
- package/dist/ts/ts/Core/Conversion.js +123 -43
- package/dist/ts/ts/Core/Data.js +9 -2
- package/dist/ts/ts/Core/DataContext.js +19 -4
- package/dist/ts/ts/Core/DataFile.js +38 -1
- package/dist/ts/ts/Core/DataMap.js +111 -5
- package/dist/ts/ts/Core/Helper/Collections.js +106 -5
- package/dist/ts/ts/Core/Helper/HashCodes.js +4 -4
- package/dist/ts/ts/Core/Helper/Identifier.js +100 -2
- package/dist/ts/ts/Core/Helper/Regex.js +134 -2
- package/dist/ts/ts/Core/Helper/SemVer.js +23 -2
- package/dist/ts/ts/Core/IdentifierSetters.js +27 -3
- package/dist/ts/ts/Core/OntologyAnnotation.js +4 -1
- package/dist/ts/ts/Core/OntologySourceReference.js +8 -1
- package/dist/ts/ts/Core/Person.js +8 -1
- package/dist/ts/ts/Core/Process/ColumnIndex.js +121 -4
- package/dist/ts/ts/Core/Process/Component.js +37 -4
- package/dist/ts/ts/Core/Process/Factor.js +9 -4
- package/dist/ts/ts/Core/Process/FactorValue.js +61 -4
- package/dist/ts/ts/Core/Process/Material.js +14 -4
- package/dist/ts/ts/Core/Process/MaterialAttribute.js +41 -3
- package/dist/ts/ts/Core/Process/MaterialAttributeValue.js +67 -4
- package/dist/ts/ts/Core/Process/MaterialType.js +15 -1
- package/dist/ts/ts/Core/Process/Process.js +150 -7
- package/dist/ts/ts/Core/Process/ProcessInput.js +48 -8
- package/dist/ts/ts/Core/Process/ProcessOutput.js +44 -7
- package/dist/ts/ts/Core/Process/ProcessParameterValue.js +10 -5
- package/dist/ts/ts/Core/Process/ProcessSequence.js +127 -6
- package/dist/ts/ts/Core/Process/Protocol.js +78 -4
- package/dist/ts/ts/Core/Process/ProtocolParameter.js +6 -2
- package/dist/ts/ts/Core/Process/Sample.js +21 -3
- package/dist/ts/ts/Core/Process/Source.js +13 -3
- package/dist/ts/ts/Core/Publication.js +8 -1
- package/dist/ts/ts/Core/Table/ArcTable.js +34 -25
- package/dist/ts/ts/Core/Table/ArcTableAux.js +150 -23
- package/dist/ts/ts/Core/Table/ArcTables.js +24 -15
- package/dist/ts/ts/Core/Table/CompositeCell.js +7 -3
- package/dist/ts/ts/Core/Table/CompositeColumn.js +8 -4
- package/dist/ts/ts/Core/Table/CompositeHeader.js +18 -15
- package/dist/ts/ts/Core/Template.js +12 -2
- package/dist/ts/ts/Core/Templates.js +8 -4
- package/dist/ts/ts/Core/Value.js +7 -3
- package/dist/ts/ts/CrossAsync.js +11 -1
- package/dist/ts/ts/FileSystem/Commit.js +18 -0
- package/dist/ts/ts/FileSystem/FileSystem.js +8 -3
- package/dist/ts/ts/FileSystem/FileSystemTree.d.ts +1 -0
- package/dist/ts/ts/FileSystem/FileSystemTree.d.ts.map +1 -1
- package/dist/ts/ts/FileSystem/FileSystemTree.js +20 -13
- package/dist/ts/ts/FileSystem/Path.d.ts +2 -0
- package/dist/ts/ts/FileSystem/Path.d.ts.map +1 -1
- package/dist/ts/ts/FileSystem/Path.js +17 -3
- package/dist/ts/ts/Json/Assay.js +26 -26
- package/dist/ts/ts/Json/Comment.js +10 -10
- package/dist/ts/ts/Json/Data.js +6 -6
- package/dist/ts/ts/Json/DataMap/DataContext.js +4 -4
- package/dist/ts/ts/Json/DataMap/DataMap.js +2 -2
- package/dist/ts/ts/Json/Decode.js +14 -9
- package/dist/ts/ts/Json/Encode.js +43 -11
- package/dist/ts/ts/Json/Investigation.js +40 -22
- package/dist/ts/ts/Json/OntologyAnnotation.js +5 -5
- package/dist/ts/ts/Json/OntologySourceReference.js +2 -2
- package/dist/ts/ts/Json/Person.js +26 -26
- package/dist/ts/ts/Json/Process/Component.js +9 -6
- package/dist/ts/ts/Json/Process/Factor.js +3 -3
- package/dist/ts/ts/Json/Process/FactorValue.js +8 -8
- package/dist/ts/ts/Json/Process/Material.js +9 -9
- package/dist/ts/ts/Json/Process/MaterialAttribute.js +1 -1
- package/dist/ts/ts/Json/Process/MaterialAttributeValue.js +8 -8
- package/dist/ts/ts/Json/Process/Process.js +12 -12
- package/dist/ts/ts/Json/Process/ProcessInput.js +4 -4
- package/dist/ts/ts/Json/Process/ProcessOutput.js +3 -3
- package/dist/ts/ts/Json/Process/ProcessParameterValue.js +10 -7
- package/dist/ts/ts/Json/Process/Protocol.js +12 -12
- package/dist/ts/ts/Json/Process/ProtocolParameter.js +3 -3
- package/dist/ts/ts/Json/Process/Sample.js +14 -14
- package/dist/ts/ts/Json/Process/Source.js +9 -9
- package/dist/ts/ts/Json/Process/Value.js +1 -1
- package/dist/ts/ts/Json/PropertyValue.js +1 -1
- package/dist/ts/ts/Json/Publication.js +6 -6
- package/dist/ts/ts/Json/ROCrate/LDContext.js +1 -0
- package/dist/ts/ts/Json/ROCrate/LDGraph.js +3 -3
- package/dist/ts/ts/Json/ROCrate/LDNode.js +19 -19
- package/dist/ts/ts/Json/Run.js +7 -7
- package/dist/ts/ts/Json/StringTable.js +1 -1
- package/dist/ts/ts/Json/Study.js +32 -32
- package/dist/ts/ts/Json/Table/ArcTable.js +29 -29
- package/dist/ts/ts/Json/Table/CellTable.js +6 -6
- package/dist/ts/ts/Json/Table/CompositeCell.js +4 -4
- package/dist/ts/ts/Json/Table/CompositeHeader.js +2 -2
- package/dist/ts/ts/Json/Table/IOType.js +1 -1
- package/dist/ts/ts/Json/Table/OATable.js +7 -7
- package/dist/ts/ts/Json/Table/Templates.js +92 -6
- package/dist/ts/ts/Json/Workflow.js +11 -11
- package/dist/ts/ts/Json/context/rocrate/isa_assay_context.js +27 -1
- package/dist/ts/ts/Json/context/rocrate/isa_comment_context.js +17 -1
- package/dist/ts/ts/Json/context/rocrate/isa_data_context.js +19 -1
- package/dist/ts/ts/Json/context/rocrate/isa_investigation_context.js +27 -1
- package/dist/ts/ts/Json/context/rocrate/isa_material_context.js +20 -1
- package/dist/ts/ts/Json/context/rocrate/isa_ontology_annotation_context.js +18 -1
- package/dist/ts/ts/Json/context/rocrate/isa_ontology_source_reference_context.js +20 -1
- package/dist/ts/ts/Json/context/rocrate/isa_organization_context.js +16 -1
- package/dist/ts/ts/Json/context/rocrate/isa_person_context.js +25 -1
- package/dist/ts/ts/Json/context/rocrate/isa_process_context.js +24 -1
- package/dist/ts/ts/Json/context/rocrate/isa_protocol_context.js +23 -1
- package/dist/ts/ts/Json/context/rocrate/isa_publication_context.js +20 -1
- package/dist/ts/ts/Json/context/rocrate/isa_sample_context.js +19 -1
- package/dist/ts/ts/Json/context/rocrate/isa_source_context.js +19 -1
- package/dist/ts/ts/Json/context/rocrate/isa_study_context.js +35 -1
- package/dist/ts/ts/Json/context/rocrate/rocrate_context.js +61 -0
- package/dist/ts/ts/Json.d.ts +13 -1
- package/dist/ts/ts/Json.d.ts.map +1 -1
- package/dist/ts/ts/Json.js +89 -2
- package/dist/ts/ts/JsonIO/Assay.js +15 -3
- package/dist/ts/ts/JsonIO/Investigation.js +15 -3
- package/dist/ts/ts/JsonIO/LDObject.js +17 -3
- package/dist/ts/ts/JsonIO/OntologyAnnotation.js +12 -2
- package/dist/ts/ts/JsonIO/Person.d.ts +16 -0
- package/dist/ts/ts/JsonIO/Person.d.ts.map +1 -0
- package/dist/ts/ts/JsonIO/Person.js +67 -0
- package/dist/ts/ts/JsonIO/Run.js +9 -3
- package/dist/ts/ts/JsonIO/Study.js +15 -3
- package/dist/ts/ts/JsonIO/Table/Compression.js +3 -3
- package/dist/ts/ts/JsonIO/Table/Templates.js +60 -5
- package/dist/ts/ts/JsonIO/Workflow.js +9 -3
- package/dist/ts/ts/License.d.ts +39 -0
- package/dist/ts/ts/License.d.ts.map +1 -0
- package/dist/ts/ts/License.js +123 -0
- package/dist/ts/ts/ROCrate/Generic/Comment.js +5 -1
- package/dist/ts/ts/ROCrate/Generic/CreativeWork.d.ts +69 -0
- package/dist/ts/ts/ROCrate/Generic/CreativeWork.d.ts.map +1 -0
- package/dist/ts/ts/ROCrate/Generic/CreativeWork.js +450 -0
- package/dist/ts/ts/ROCrate/Generic/Dataset.d.ts +1 -0
- package/dist/ts/ts/ROCrate/Generic/Dataset.d.ts.map +1 -1
- package/dist/ts/ts/ROCrate/Generic/Dataset.js +27 -1
- package/dist/ts/ts/ROCrate/Generic/DefinedTerm.js +5 -1
- package/dist/ts/ts/ROCrate/Generic/File.js +5 -1
- package/dist/ts/ts/ROCrate/Generic/LabProcess.js +5 -1
- package/dist/ts/ts/ROCrate/Generic/LabProtocol.js +5 -1
- package/dist/ts/ts/ROCrate/Generic/Organization.js +5 -1
- package/dist/ts/ts/ROCrate/Generic/Person.js +7 -2
- package/dist/ts/ts/ROCrate/Generic/PostalAddress.js +5 -1
- package/dist/ts/ts/ROCrate/Generic/PropertyValue.js +19 -15
- package/dist/ts/ts/ROCrate/Generic/Sample.js +5 -1
- package/dist/ts/ts/ROCrate/Generic/ScholarlyArticle.js +5 -1
- package/dist/ts/ts/ROCrate/LDContext.js +15 -6
- package/dist/ts/ts/ROCrate/LDObject.js +53 -17
- package/dist/ts/ts/ROCrateIO.d.ts +9 -3
- package/dist/ts/ts/ROCrateIO.d.ts.map +1 -1
- package/dist/ts/ts/ROCrateIO.js +67 -14
- package/dist/ts/ts/Spreadsheet/AnnotationTable/ArcTable.js +18 -15
- package/dist/ts/ts/Spreadsheet/AnnotationTable/CompositeCell.js +5 -4
- package/dist/ts/ts/Spreadsheet/AnnotationTable/CompositeColumn.js +40 -17
- package/dist/ts/ts/Spreadsheet/AnnotationTable/CompositeHeader.js +4 -4
- package/dist/ts/ts/Spreadsheet/ArcAssay.js +30 -15
- package/dist/ts/ts/Spreadsheet/ArcInvestigation.js +32 -18
- package/dist/ts/ts/Spreadsheet/ArcRun.js +23 -8
- package/dist/ts/ts/Spreadsheet/ArcStudy.js +22 -7
- package/dist/ts/ts/Spreadsheet/ArcWorkflow.js +23 -8
- package/dist/ts/ts/Spreadsheet/CollectionAux.js +75 -5
- package/dist/ts/ts/Spreadsheet/DataMap.js +1 -1
- package/dist/ts/ts/Spreadsheet/DataMapTable/DataMapColumn.js +4 -4
- package/dist/ts/ts/Spreadsheet/DataMapTable/DataMapHeader.js +8 -8
- package/dist/ts/ts/Spreadsheet/DataMapTable/DataMapTable.js +4 -4
- package/dist/ts/ts/Spreadsheet/Metadata/Assays.js +6 -6
- package/dist/ts/ts/Spreadsheet/Metadata/Comment.js +1 -1
- package/dist/ts/ts/Spreadsheet/Metadata/Contacts.js +2 -2
- package/dist/ts/ts/Spreadsheet/Metadata/Conversions.js +6 -3
- package/dist/ts/ts/Spreadsheet/Metadata/DesignDescriptors.js +9 -3
- package/dist/ts/ts/Spreadsheet/Metadata/Factors.js +6 -4
- package/dist/ts/ts/Spreadsheet/Metadata/OntologyAnnotation.js +7 -5
- package/dist/ts/ts/Spreadsheet/Metadata/OntologySourceReference.js +1 -1
- package/dist/ts/ts/Spreadsheet/Metadata/Protocols.js +10 -8
- package/dist/ts/ts/Spreadsheet/Metadata/Publication.js +5 -5
- package/dist/ts/ts/Spreadsheet/Metadata/Run.js +6 -6
- package/dist/ts/ts/Spreadsheet/Metadata/SparseTable.js +246 -10
- package/dist/ts/ts/Spreadsheet/Metadata/Study.js +19 -13
- package/dist/ts/ts/Spreadsheet/Metadata/Workflow.js +5 -5
- package/dist/ts/ts/Template.Web.js +5 -1
- package/dist/ts/ts/ValidationPackages/ValidationPackage.js +8 -1
- package/dist/ts/ts/ValidationPackages/ValidationPackagesConfig.js +10 -3
- package/dist/ts/ts/WebRequest/WebRequest.Node.js +1 -0
- package/dist/ts/ts/Xlsx.js +41 -1
- package/dist/ts/ts/Yaml/ValidationPackage.js +18 -2
- package/dist/ts/ts/Yaml/ValidationPackagesConfig.js +5 -2
- package/dist/ts/ts/fable_modules/DynamicObj.7.0.1/DynamicObj.fs.js +27 -4
- package/dist/ts/ts/fable_modules/DynamicObj.7.0.1/FableJS.fs.js +14 -3
- package/dist/ts/ts/fable_modules/DynamicObj.7.0.1/HashCodes.fs.js +30 -4
- package/dist/ts/ts/fable_modules/DynamicObj.7.0.1/PropertyHelper.fs.js +5 -1
- package/dist/ts/ts/fable_modules/DynamicObj.7.0.1/ReflectionUtils.fs.js +65 -2
- package/dist/ts/ts/fable_modules/Fable.Fetch.2.6.0/Fetch.fs.js +257 -1
- package/dist/ts/ts/fable_modules/Fable.Promise.3.2.0/Promise.fs.js +71 -1
- package/dist/ts/ts/fable_modules/Fable.Promise.3.2.0/PromiseImpl.fs.js +11 -1
- package/dist/ts/ts/fable_modules/Fable.SimpleHttp.3.5.0/Http.fs.js +188 -11
- package/dist/ts/ts/fable_modules/Fable.SimpleHttp.3.5.0/Types.fs.js +80 -2
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.0-alpha.1/Cells/FsCell.fs.js +63 -4
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.0-alpha.1/Cells/FsCellsCollection.fs.js +17 -7
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.0-alpha.1/DSL/CellBuilder.fs.js +198 -0
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.0-alpha.1/DSL/Expression.fs.js +46 -0
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.0-alpha.1/DSL/RowBuilder.fs.js +131 -0
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.0-alpha.1/DSL/Types.fs.js +307 -0
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.0-alpha.1/FsAddress.fs.js +38 -2
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.0-alpha.1/FsColumn.fs.js +11 -4
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.0-alpha.1/FsRow.fs.js +12 -5
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.0-alpha.1/FsWorkbook.fs.js +9 -2
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.0-alpha.1/FsWorksheet.fs.js +14 -7
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.0-alpha.1/HashCodes.fs.js +31 -1
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.0-alpha.1/Json/Cell.fs.js +65 -0
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.0-alpha.1/Json/Column.fs.js +38 -0
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.0-alpha.1/Json/Row.fs.js +38 -0
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.0-alpha.1/Json/Table.fs.js +34 -0
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.0-alpha.1/Json/Value.fs.js +49 -3
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.0-alpha.1/Json/Workbook.fs.js +44 -0
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.0-alpha.1/Json/Worksheet.fs.js +129 -0
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.0-alpha.1/Ranges/FsRange.fs.js +9 -2
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.0-alpha.1/Ranges/FsRangeAddress.fs.js +82 -3
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.0-alpha.1/Ranges/FsRangeBase.fs.js +12 -3
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.0-alpha.1/Ranges/FsRangeColumn.fs.js +17 -2
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.0-alpha.1/Ranges/FsRangeRow.fs.js +9 -2
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.0-alpha.1/Tables/FsTable.fs.js +12 -5
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.0-alpha.1/Tables/FsTableField.fs.js +12 -3
- package/dist/ts/ts/fable_modules/FsSpreadsheet.Js.7.0.0-alpha.1/Cell.fs.js +2 -2
- package/dist/ts/ts/fable_modules/FsSpreadsheet.Js.7.0.0-alpha.1/FsExtensions.fs.js +42 -3
- package/dist/ts/ts/fable_modules/FsSpreadsheet.Js.7.0.0-alpha.1/Json.fs.js +53 -0
- package/dist/ts/ts/fable_modules/FsSpreadsheet.Js.7.0.0-alpha.1/Table.fs.js +9 -9
- package/dist/ts/ts/fable_modules/FsSpreadsheet.Js.7.0.0-alpha.1/Workbook.fs.js +1 -1
- package/dist/ts/ts/fable_modules/FsSpreadsheet.Js.7.0.0-alpha.1/Worksheet.fs.js +2 -2
- package/dist/ts/ts/fable_modules/FsSpreadsheet.Js.7.0.0-alpha.1/Xlsx.fs.js +5 -1
- package/dist/ts/ts/fable_modules/Thoth.Json.Core.0.7.0/Decode.fs.js +730 -23
- package/dist/ts/ts/fable_modules/Thoth.Json.Core.0.7.0/Encode.fs.js +192 -7
- package/dist/ts/ts/fable_modules/Thoth.Json.Core.0.7.0/Types.fs.js +45 -1
- package/dist/ts/ts/fable_modules/Thoth.Json.JavaScript.0.4.1/Decode.fs.js +15 -2
- package/dist/ts/ts/fable_modules/YAMLicious.0.0.3/Decode.fs.js +1383 -15
- package/dist/ts/ts/fable_modules/YAMLicious.0.0.3/Encode.fs.js +45 -4
- package/dist/ts/ts/fable_modules/YAMLicious.0.0.3/Interop/JsInterop.fs.js +10 -0
- package/dist/ts/ts/fable_modules/YAMLicious.0.0.3/Persil.fs.js +5 -5
- package/dist/ts/ts/fable_modules/YAMLicious.0.0.3/Preprocessing.fs.js +16 -6
- package/dist/ts/ts/fable_modules/YAMLicious.0.0.3/Reader.fs.js +26 -23
- package/dist/ts/ts/fable_modules/YAMLicious.0.0.3/RegexActivePatterns.fs.js +1 -1
- package/dist/ts/ts/fable_modules/YAMLicious.0.0.3/Writer.fs.js +8 -8
- package/dist/ts/ts/fable_modules/YAMLicious.0.0.3/YAMLiciousTypes.fs.js +18 -2
- package/package.json +1 -1
- package/dist/ts/ts/FileSystem/DefaultGitattributes.d.ts +0 -2
- package/dist/ts/ts/FileSystem/DefaultGitattributes.d.ts.map +0 -1
- package/dist/ts/ts/FileSystem/DefaultGitattributes.js +0 -3
- package/dist/ts/ts/FileSystem/DefaultGitignore.d.ts +0 -2
- package/dist/ts/ts/FileSystem/DefaultGitignore.d.ts.map +0 -1
- package/dist/ts/ts/FileSystem/DefaultGitignore.js +0 -3
package/dist/ts/ts/Json/Study.js
CHANGED
|
@@ -1,23 +1,23 @@
|
|
|
1
|
-
import {
|
|
2
|
-
import {
|
|
3
|
-
import { ofArray, map as map$
|
|
4
|
-
import {
|
|
1
|
+
import { ResizeArray_map, Option_fromValueWithDefault } from '../Core/Helper/Collections.js';
|
|
2
|
+
import { defaultArg, value, map, unwrap, bind, defaultArgWith } from '../../node_modules/@fable-org/fable-library-js/Option.js';
|
|
3
|
+
import { tryFind, choose, ofArray, singleton, map as map$2, empty } from '../../node_modules/@fable-org/fable-library-js/List.js';
|
|
4
|
+
import { ArcAssay, ArcStudy } from '../Core/ArcTypes.js';
|
|
5
5
|
import { tryInclude, tryIncludeSeq, tryIncludeList } from './Encode.js';
|
|
6
|
-
import {
|
|
7
|
-
import {
|
|
8
|
-
import {
|
|
9
|
-
import {
|
|
10
|
-
import {
|
|
11
|
-
import {
|
|
12
|
-
import {
|
|
13
|
-
import {
|
|
6
|
+
import { encoder as encoder$1, decoder as decoder$1, ROCrate_encoder as ROCrate_encoder$1, ROCrate_decoder as ROCrate_decoder$3, ISAJson_encoder as ISAJson_encoder$2, ISAJson_decoder as ISAJson_decoder$4 } from './Publication.js';
|
|
7
|
+
import { encoder as encoder$2, decoder as decoder$2, ROCrate_encoder as ROCrate_encoder$2, ROCrate_decoder as ROCrate_decoder$4, ISAJson_encoder as ISAJson_encoder$3, ISAJson_decoder as ISAJson_decoder$3 } from './Person.js';
|
|
8
|
+
import { OntologyAnnotation_encoder, OntologyAnnotation_decoder, OntologyAnnotation_ROCrate_encoderDefinedTerm, OntologyAnnotation_ROCrate_decoderDefinedTerm, OntologyAnnotation_ISAJson_encoder, OntologyAnnotation_ISAJson_decoder } from './OntologyAnnotation.js';
|
|
9
|
+
import { encoder as encoder$3, decoder as decoder$3, encoderCompressed as encoderCompressed$1, decoderCompressed as decoderCompressed$1 } from './Table/ArcTable.js';
|
|
10
|
+
import { encoder as encoder$4, decoder as decoder$4, encoderCompressed as encoderCompressed$2, decoderCompressed as decoderCompressed$2 } from './DataMap/DataMap.js';
|
|
11
|
+
import { encoder as encoder$5, decoder as decoder$5, ROCrate_encoder as ROCrate_encoder$6, ROCrate_decoder as ROCrate_decoder$5, ISAJson_encoder as ISAJson_encoder$6, ISAJson_decoder as ISAJson_decoder$5 } from './Comment.js';
|
|
12
|
+
import { map as map$1, isEmpty } from '../../node_modules/@fable-org/fable-library-js/Seq.js';
|
|
13
|
+
import { object, string, resizeArray, list as list$1 } from '../fable_modules/Thoth.Json.Core.0.7.0/Decode.fs.js';
|
|
14
14
|
import { getEnumerator, disposeSafe } from '../../node_modules/@fable-org/fable-library-js/Util.js';
|
|
15
15
|
import { replace } from '../../node_modules/@fable-org/fable-library-js/String.js';
|
|
16
|
-
import {
|
|
17
|
-
import {
|
|
18
|
-
import { list
|
|
19
|
-
import {
|
|
20
|
-
import {
|
|
16
|
+
import { Study_tryFileNameFromIdentifier, Study_tryIdentifierFromFileName, createMissingIdentifier, Study_fileNameFromIdentifier } from '../Core/Helper/Identifier.js';
|
|
17
|
+
import { ARCtrl_ArcTables__ArcTables_GetProcesses, ARCtrl_ArcTables__ArcTables_fromProcesses_Static_62A3309D, Person_setSourceAssayComment, Person_getSourceAssayIdentifiersFromComments, Person_removeSourceAssayComments } from '../Core/Conversion.js';
|
|
18
|
+
import { list } from '../fable_modules/Thoth.Json.Core.0.7.0/Encode.fs.js';
|
|
19
|
+
import { ROCrate_encoder as ROCrate_encoder$3, ROCrate_decoder as ROCrate_decoder$2, ISAJson_encoder as ISAJson_encoder$4, ISAJson_decoder as ISAJson_decoder$1 } from './Process/Process.js';
|
|
20
|
+
import { ROCrate_encoder as ROCrate_encoder$4, ROCrate_decoder as ROCrate_decoder$1, ISAJson_encoder as ISAJson_encoder$5, ISAJson_decoder as ISAJson_decoder$2 } from './Assay.js';
|
|
21
21
|
import { ROCrate_encoder as ROCrate_encoder$5 } from './Data.js';
|
|
22
22
|
import { getData, getUnits, getFactors, getCharacteristics, getProtocols } from '../Core/Process/ProcessSequence.js';
|
|
23
23
|
import { context_jsonvalue } from './context/rocrate/isa_study_context.js';
|
|
@@ -64,7 +64,7 @@ function encoder(study) {
|
|
|
64
64
|
}), study.RegisteredAssayIdentifiers), tryIncludeSeq("Comments", encoder$5, study.Comments)]));
|
|
65
65
|
return {
|
|
66
66
|
Encode(helpers_6) {
|
|
67
|
-
const arg = map$
|
|
67
|
+
const arg = map$1((tupledArg_1) => [tupledArg_1[0], tupledArg_1[1].Encode(helpers_6)], values_1);
|
|
68
68
|
return helpers_6.encodeObject(arg);
|
|
69
69
|
}
|
|
70
70
|
};
|
|
@@ -102,7 +102,7 @@ function encoderCompressed(stringTable, oaTable, cellTable, study) {
|
|
|
102
102
|
}), study.RegisteredAssayIdentifiers), tryIncludeSeq("Comments", encoder$5, study.Comments)]));
|
|
103
103
|
return {
|
|
104
104
|
Encode(helpers_6) {
|
|
105
|
-
const arg = map$
|
|
105
|
+
const arg = map$1((tupledArg_1) => [tupledArg_1[0], tupledArg_1[1].Encode(helpers_6)], values_1);
|
|
106
106
|
return helpers_6.encodeObject(arg);
|
|
107
107
|
}
|
|
108
108
|
};
|
|
@@ -110,7 +110,7 @@ function encoderCompressed(stringTable, oaTable, cellTable, study) {
|
|
|
110
110
|
function decoderCompressed(stringTable, oaTable, cellTable) {
|
|
111
111
|
return object((get$) => {
|
|
112
112
|
let objectArg, objectArg_1, objectArg_2, objectArg_3, objectArg_4, arg_11, objectArg_5, arg_13, objectArg_6, arg_15, objectArg_7, arg_17, objectArg_8, arg_19, objectArg_9, arg_21, objectArg_10, arg_23, objectArg_11;
|
|
113
|
-
return new ArcStudy((objectArg = get$.Required, objectArg.Field("Identifier", string)), unwrap((objectArg_1 = get$.Optional, objectArg_1.Field("Title", string))), unwrap((objectArg_2 = get$.Optional, objectArg_2.Field("Description", string))), unwrap((objectArg_3 = get$.Optional, objectArg_3.Field("SubmissionDate", string))), unwrap((objectArg_4 = get$.Optional, objectArg_4.Field("PublicReleaseDate", string))), unwrap((arg_11 = resizeArray(decoder$1), objectArg_5 = get$.Optional, objectArg_5.Field("Publications", arg_11))), unwrap((arg_13 = resizeArray(decoder$2), objectArg_6 = get$.Optional, objectArg_6.Field("Contacts", arg_13))), unwrap((arg_15 = resizeArray(OntologyAnnotation_decoder), objectArg_7 = get$.Optional, objectArg_7.Field("StudyDesignDescriptors", arg_15))), unwrap((arg_17 = resizeArray(decoderCompressed$1(stringTable, oaTable, cellTable)), objectArg_8 = get$.Optional, objectArg_8.Field("Tables", arg_17))), unwrap((arg_19 = decoderCompressed$2(), objectArg_9 = get$.Optional, objectArg_9.Field("DataMap", arg_19))), unwrap((arg_21 = resizeArray(string), objectArg_10 = get$.Optional, objectArg_10.Field("RegisteredAssayIdentifiers", arg_21))), unwrap((arg_23 = resizeArray(decoder$5), objectArg_11 = get$.Optional, objectArg_11.Field("Comments", arg_23))));
|
|
113
|
+
return new ArcStudy((objectArg = get$.Required, objectArg.Field("Identifier", string)), unwrap((objectArg_1 = get$.Optional, objectArg_1.Field("Title", string))), unwrap((objectArg_2 = get$.Optional, objectArg_2.Field("Description", string))), unwrap((objectArg_3 = get$.Optional, objectArg_3.Field("SubmissionDate", string))), unwrap((objectArg_4 = get$.Optional, objectArg_4.Field("PublicReleaseDate", string))), unwrap((arg_11 = resizeArray(decoder$1), objectArg_5 = get$.Optional, objectArg_5.Field("Publications", arg_11))), unwrap((arg_13 = resizeArray(decoder$2), objectArg_6 = get$.Optional, objectArg_6.Field("Contacts", arg_13))), unwrap((arg_15 = resizeArray(OntologyAnnotation_decoder), objectArg_7 = get$.Optional, objectArg_7.Field("StudyDesignDescriptors", arg_15))), unwrap((arg_17 = resizeArray(decoderCompressed$1(stringTable, oaTable, cellTable)), objectArg_8 = get$.Optional, objectArg_8.Field("Tables", arg_17))), unwrap((arg_19 = decoderCompressed$2(stringTable, oaTable, cellTable), objectArg_9 = get$.Optional, objectArg_9.Field("DataMap", arg_19))), unwrap((arg_21 = resizeArray(string), objectArg_10 = get$.Optional, objectArg_10.Field("RegisteredAssayIdentifiers", arg_21))), unwrap((arg_23 = resizeArray(decoder$5), objectArg_11 = get$.Optional, objectArg_11.Field("Comments", arg_23))));
|
|
114
114
|
});
|
|
115
115
|
}
|
|
116
116
|
function ROCrate_genID(a) {
|
|
@@ -130,7 +130,7 @@ function ROCrate_encoder(assays, s) {
|
|
|
130
130
|
Encode(helpers) {
|
|
131
131
|
return helpers.encodeString(value);
|
|
132
132
|
}
|
|
133
|
-
})], ["@type", list
|
|
133
|
+
})], ["@type", list(singleton({
|
|
134
134
|
Encode(helpers_1) {
|
|
135
135
|
return helpers_1.encodeString("Study");
|
|
136
136
|
}
|
|
@@ -165,7 +165,7 @@ function ROCrate_encoder(assays, s) {
|
|
|
165
165
|
}), s.PublicReleaseDate), tryIncludeSeq("publications", ROCrate_encoder$1, s.Publications), tryIncludeSeq("people", ROCrate_encoder$2, s.Contacts), tryIncludeList("processSequence", (studyName = s.Identifier, (oa_3) => ROCrate_encoder$3(studyName, void 0, oa_3)), processes), tryIncludeSeq("assays", (assayName_1 = s.Identifier, (a_1) => ROCrate_encoder$4(assayName_1, a_1)), assays_1), tryIncludeList("dataFiles", ROCrate_encoder$5, getData(processes)), tryIncludeSeq("comments", ROCrate_encoder$6, s.Comments), ["@context", context_jsonvalue]]));
|
|
166
166
|
return {
|
|
167
167
|
Encode(helpers_9) {
|
|
168
|
-
const arg = map$
|
|
168
|
+
const arg = map$1((tupledArg_1) => [tupledArg_1[0], tupledArg_1[1].Encode(helpers_9)], values_1);
|
|
169
169
|
return helpers_9.encodeObject(arg);
|
|
170
170
|
}
|
|
171
171
|
};
|
|
@@ -174,15 +174,15 @@ const ROCrate_decoder = object((get$) => {
|
|
|
174
174
|
let objectArg, arg_6, objectArg_2, objectArg_3, objectArg_4, objectArg_5, objectArg_6, arg_16, objectArg_7, arg_18, objectArg_8, arg_20, objectArg_9, arg_22, objectArg_10;
|
|
175
175
|
const identifier = defaultArg(bind(Study_tryIdentifierFromFileName, (objectArg = get$.Optional, objectArg.Field("filename", string))), createMissingIdentifier());
|
|
176
176
|
let assays;
|
|
177
|
-
const arg_3 = list(ROCrate_decoder$
|
|
177
|
+
const arg_3 = list$1(ROCrate_decoder$1);
|
|
178
178
|
const objectArg_1 = get$.Optional;
|
|
179
179
|
assays = objectArg_1.Field("assays", arg_3);
|
|
180
180
|
const assayIdentifiers = map((arg_4) => {
|
|
181
|
-
const collection = map$
|
|
181
|
+
const collection = map$2((a) => a.Identifier, arg_4);
|
|
182
182
|
return Array.from(collection);
|
|
183
183
|
}, assays);
|
|
184
|
-
const tables = map((ps) => ARCtrl_ArcTables__ArcTables_fromProcesses_Static_62A3309D(ps).Tables, (arg_6 = list(ROCrate_decoder$
|
|
185
|
-
return [new ArcStudy(identifier, unwrap((objectArg_3 = get$.Optional, objectArg_3.Field("title", string))), unwrap((objectArg_4 = get$.Optional, objectArg_4.Field("description", string))), unwrap((objectArg_5 = get$.Optional, objectArg_5.Field("submissionDate", string))), unwrap((objectArg_6 = get$.Optional, objectArg_6.Field("publicReleaseDate", string))), unwrap((arg_16 = resizeArray(ROCrate_decoder$
|
|
184
|
+
const tables = map((ps) => ARCtrl_ArcTables__ArcTables_fromProcesses_Static_62A3309D(ps).Tables, (arg_6 = list$1(ROCrate_decoder$2), objectArg_2 = get$.Optional, objectArg_2.Field("processSequence", arg_6)));
|
|
185
|
+
return [new ArcStudy(identifier, unwrap((objectArg_3 = get$.Optional, objectArg_3.Field("title", string))), unwrap((objectArg_4 = get$.Optional, objectArg_4.Field("description", string))), unwrap((objectArg_5 = get$.Optional, objectArg_5.Field("submissionDate", string))), unwrap((objectArg_6 = get$.Optional, objectArg_6.Field("publicReleaseDate", string))), unwrap((arg_16 = resizeArray(ROCrate_decoder$3), objectArg_7 = get$.Optional, objectArg_7.Field("publications", arg_16))), unwrap((arg_18 = resizeArray(ROCrate_decoder$4), objectArg_8 = get$.Optional, objectArg_8.Field("people", arg_18))), unwrap((arg_20 = resizeArray(OntologyAnnotation_ROCrate_decoderDefinedTerm), objectArg_9 = get$.Optional, objectArg_9.Field("studyDesignDescriptors", arg_20))), unwrap(tables), void 0, unwrap(assayIdentifiers), unwrap((arg_22 = resizeArray(ROCrate_decoder$5), objectArg_10 = get$.Optional, objectArg_10.Field("comments", arg_22)))), defaultArg(assays, empty())];
|
|
186
186
|
});
|
|
187
187
|
function ISAJson_encoder(idMap, assays, s) {
|
|
188
188
|
const f = (s_1) => {
|
|
@@ -251,7 +251,7 @@ function ISAJson_encoder(idMap, assays, s) {
|
|
|
251
251
|
}), study.PublicReleaseDate), tryIncludeSeq("publications", (oa_2) => ISAJson_encoder$2(idMap, oa_2), study.Publications), tryIncludeSeq("people", (person_2) => ISAJson_encoder$3(idMap, person_2), study.Contacts), tryIncludeSeq("studyDesignDescriptors", (oa_3) => OntologyAnnotation_ISAJson_encoder(idMap, oa_3), study.StudyDesignDescriptors), encodedProtocols, encodedMaterials, tryIncludeList("processSequence", (studyName_1 = s_1.Identifier, (oa_4) => ISAJson_encoder$4(studyName_1, void 0, idMap, oa_4)), processes), tryIncludeSeq("assays", (studyName_2 = s_1.Identifier, (a_2) => ISAJson_encoder$5(studyName_2, idMap, a_2)), assays_1), encodedFactors, encodedCharacteristics, encodedUnits, tryIncludeSeq("comments", (comment) => ISAJson_encoder$6(idMap, comment), study.Comments)]));
|
|
252
252
|
return {
|
|
253
253
|
Encode(helpers_7) {
|
|
254
|
-
const arg = map$
|
|
254
|
+
const arg = map$1((tupledArg_1) => [tupledArg_1[0], tupledArg_1[1].Encode(helpers_7)], values_1);
|
|
255
255
|
return helpers_7.encodeObject(arg);
|
|
256
256
|
}
|
|
257
257
|
};
|
|
@@ -272,13 +272,13 @@ const ISAJson_decoder = Decode_objectNoAdditionalProperties(ISAJson_allowedField
|
|
|
272
272
|
const tables = map((arg_6) => {
|
|
273
273
|
const a = ARCtrl_ArcTables__ArcTables_fromProcesses_Static_62A3309D(arg_6);
|
|
274
274
|
return a.Tables;
|
|
275
|
-
}, (arg_5 = list(ISAJson_decoder$1), objectArg_2 = get$.Optional, objectArg_2.Field("processSequence", arg_5)));
|
|
275
|
+
}, (arg_5 = list$1(ISAJson_decoder$1), objectArg_2 = get$.Optional, objectArg_2.Field("processSequence", arg_5)));
|
|
276
276
|
let assays;
|
|
277
|
-
const arg_8 = list(ISAJson_decoder$
|
|
277
|
+
const arg_8 = list$1(ISAJson_decoder$2);
|
|
278
278
|
const objectArg_3 = get$.Optional;
|
|
279
279
|
assays = objectArg_3.Field("assays", arg_8);
|
|
280
280
|
let personsRaw;
|
|
281
|
-
const arg_10 = resizeArray(ISAJson_decoder$
|
|
281
|
+
const arg_10 = resizeArray(ISAJson_decoder$3);
|
|
282
282
|
const objectArg_4 = get$.Optional;
|
|
283
283
|
personsRaw = objectArg_4.Field("people", arg_10);
|
|
284
284
|
const persons = [];
|
|
@@ -317,10 +317,10 @@ const ISAJson_decoder = Decode_objectNoAdditionalProperties(ISAJson_allowedField
|
|
|
317
317
|
}
|
|
318
318
|
}
|
|
319
319
|
const assayIdentifiers = map((arg_11) => {
|
|
320
|
-
const collection = map$
|
|
320
|
+
const collection = map$2((a_1) => a_1.Identifier, arg_11);
|
|
321
321
|
return Array.from(collection);
|
|
322
322
|
}, assays);
|
|
323
|
-
return [new ArcStudy(identifier, unwrap((objectArg_5 = get$.Optional, objectArg_5.Field("title", string))), unwrap((objectArg_6 = get$.Optional, objectArg_6.Field("description", string))), unwrap((objectArg_7 = get$.Optional, objectArg_7.Field("submissionDate", string))), unwrap((objectArg_8 = get$.Optional, objectArg_8.Field("publicReleaseDate", string))), unwrap((arg_21 = resizeArray(ISAJson_decoder$
|
|
323
|
+
return [new ArcStudy(identifier, unwrap((objectArg_5 = get$.Optional, objectArg_5.Field("title", string))), unwrap((objectArg_6 = get$.Optional, objectArg_6.Field("description", string))), unwrap((objectArg_7 = get$.Optional, objectArg_7.Field("submissionDate", string))), unwrap((objectArg_8 = get$.Optional, objectArg_8.Field("publicReleaseDate", string))), unwrap((arg_21 = resizeArray(ISAJson_decoder$4), objectArg_9 = get$.Optional, objectArg_9.Field("publications", arg_21))), unwrap(persons.length === 0 ? void 0 : persons), unwrap((arg_23 = resizeArray(OntologyAnnotation_ISAJson_decoder), objectArg_10 = get$.Optional, objectArg_10.Field("studyDesignDescriptors", arg_23))), unwrap(tables), void 0, unwrap(assayIdentifiers), unwrap((arg_25 = resizeArray(ISAJson_decoder$5), objectArg_11 = get$.Optional, objectArg_11.Field("comments", arg_25)))), defaultArg(assays, empty())];
|
|
324
324
|
});
|
|
325
325
|
|
|
326
326
|
export { Helper_getAssayInformation, ISAJson_allowedFields, ISAJson_decoder, ISAJson_encoder, ROCrate_decoder, ROCrate_encoder, ROCrate_genID, decoder, decoderCompressed, encoder, encoderCompressed };
|
|
@@ -1,34 +1,34 @@
|
|
|
1
|
-
import { arrayHash, equalArrays, getEnumerator, disposeSafe, int32ToString
|
|
2
|
-
import {
|
|
1
|
+
import { compareArrays, arrayHash, equalArrays, getEnumerator, disposeSafe, int32ToString } from '../../../node_modules/@fable-org/fable-library-js/Util.js';
|
|
2
|
+
import { encoder as encoder$1, decoder as decoder$2 } from './CompositeCell.js';
|
|
3
3
|
import { getItemFromDict } from '../../../node_modules/@fable-org/fable-library-js/MapUtil.js';
|
|
4
4
|
import { ErrorReason$1_BadPrimitive } from '../../fable_modules/Thoth.Json.Core.0.7.0/Types.fs.js';
|
|
5
|
-
import { toList, delay,
|
|
6
|
-
import { list
|
|
7
|
-
import {
|
|
5
|
+
import { toList, delay, append, singleton, map, empty } from '../../../node_modules/@fable-org/fable-library-js/Seq.js';
|
|
6
|
+
import { list } from '../../fable_modules/Thoth.Json.Core.0.7.0/Encode.fs.js';
|
|
7
|
+
import { encoder as encoder$2, decoder as decoder$1 } from './CompositeHeader.js';
|
|
8
8
|
import { intDictionary } from '../Encode.js';
|
|
9
|
-
import { ColumnValueRefs_Constant, ColumnValueRefs_Sparse,
|
|
9
|
+
import { ensureCellHashInValueMap, ColumnValueRefs_Constant, ColumnValueRefs_Sparse, ArcTableValues, Unchecked_setCellAt } from '../../Core/Table/ArcTableAux.js';
|
|
10
10
|
import { ArcTable } from '../../Core/Table/ArcTable.js';
|
|
11
|
-
import {
|
|
11
|
+
import { object, list as list$1, map$0027, tuple2, int, string, map as map$1, resizeArray, array, Helpers_prependPath } from '../../fable_modules/Thoth.Json.Core.0.7.0/Decode.fs.js';
|
|
12
12
|
import { defaultArg } from '../../../node_modules/@fable-org/fable-library-js/Option.js';
|
|
13
|
-
import {
|
|
13
|
+
import { empty as empty$1, ofArray } from '../../../node_modules/@fable-org/fable-library-js/List.js';
|
|
14
14
|
import { Dictionary } from '../../../node_modules/@fable-org/fable-library-js/MutableMap.js';
|
|
15
|
-
import { empty as empty$
|
|
15
|
+
import { empty as empty$2 } from '../../../node_modules/@fable-org/fable-library-js/Map.js';
|
|
16
16
|
import { Decode_tryOneOf, Decode_intDictionary, Decode_dictionary } from '../Decode.js';
|
|
17
|
-
import { FSharpResult$
|
|
17
|
+
import { FSharpResult$2_Error, FSharpResult$2_Ok } from '../../../node_modules/@fable-org/fable-library-js/Result.js';
|
|
18
18
|
import { decodeCell, encodeCell } from './CellTable.js';
|
|
19
|
-
import {
|
|
20
|
-
import {
|
|
19
|
+
import { iterateIndexed, fold, setItem, fill, item } from '../../../node_modules/@fable-org/fable-library-js/Array.js';
|
|
20
|
+
import { encodeString, decodeString } from '../StringTable.js';
|
|
21
21
|
|
|
22
22
|
function encoder(table) {
|
|
23
23
|
const valueMap = table.Values.ValueMap;
|
|
24
|
-
const cellEncoder = (hash) => encoder$
|
|
24
|
+
const cellEncoder = (hash) => encoder$1(getItemFromDict(valueMap, hash));
|
|
25
25
|
const values = toList(delay(() => {
|
|
26
26
|
let value;
|
|
27
27
|
return append(singleton(["name", (value = table.Name, {
|
|
28
28
|
Encode(helpers) {
|
|
29
29
|
return helpers.encodeString(value);
|
|
30
30
|
}
|
|
31
|
-
})]), delay(() => append(table.Headers.length !== 0 ? singleton(["headers", list
|
|
31
|
+
})]), delay(() => append(table.Headers.length !== 0 ? singleton(["headers", list(toList(delay(() => map(encoder$2, table.Headers))))]) : empty(), delay(() => table.Values.RowCount !== 0 ? append(singleton(["columns", intDictionary((col) => {
|
|
32
32
|
if (col.tag === /* Sparse */
|
|
33
33
|
1) {
|
|
34
34
|
return intDictionary(cellEncoder, col.fields[0]);
|
|
@@ -42,11 +42,11 @@ function encoder(table) {
|
|
|
42
42
|
return helpers_1.encodeSignedIntegralNumber(value_1);
|
|
43
43
|
}
|
|
44
44
|
})]);
|
|
45
|
-
})) : empty
|
|
45
|
+
})) : empty()))));
|
|
46
46
|
}));
|
|
47
47
|
return {
|
|
48
48
|
Encode(helpers_2) {
|
|
49
|
-
const arg = map
|
|
49
|
+
const arg = map((tupledArg) => [tupledArg[0], tupledArg[1].Encode(helpers_2)], values);
|
|
50
50
|
return helpers_2.encodeObject(arg);
|
|
51
51
|
}
|
|
52
52
|
};
|
|
@@ -54,9 +54,9 @@ function encoder(table) {
|
|
|
54
54
|
const decoderV2Deprecated = object((get$) => {
|
|
55
55
|
let arg_1, objectArg, arg_3, objectArg_1, objectArg_2;
|
|
56
56
|
let decodedHeader;
|
|
57
|
-
const collection = defaultArg((arg_1 = list(decoder$
|
|
57
|
+
const collection = defaultArg((arg_1 = list$1(decoder$1), objectArg = get$.Optional, objectArg.Field("header", arg_1)), empty$1());
|
|
58
58
|
decodedHeader = Array.from(collection);
|
|
59
|
-
const decodedValues = new Dictionary(defaultArg((arg_3 = map$0027(tuple2(int, int), decoder$
|
|
59
|
+
const decodedValues = new Dictionary(defaultArg((arg_3 = map$0027(tuple2(int, int), decoder$2), objectArg_1 = get$.Optional, objectArg_1.Field("values", arg_3)), empty$2({
|
|
60
60
|
Compare: compareArrays
|
|
61
61
|
})), {
|
|
62
62
|
Equals: equalArrays,
|
|
@@ -76,11 +76,11 @@ const decoderV2Deprecated = object((get$) => {
|
|
|
76
76
|
});
|
|
77
77
|
const decoder = (() => {
|
|
78
78
|
const valueMap = /* @__PURE__ */ new Map([]);
|
|
79
|
-
const cellDecoder = map((cell) => ensureCellHashInValueMap(cell, valueMap), decoder$
|
|
80
|
-
const columnDecoder = Decode_tryOneOf(ofArray([map(ColumnValueRefs_Constant, cellDecoder), map(ColumnValueRefs_Sparse, Decode_intDictionary(cellDecoder))]));
|
|
79
|
+
const cellDecoder = map$1((cell) => ensureCellHashInValueMap(cell, valueMap), decoder$2);
|
|
80
|
+
const columnDecoder = Decode_tryOneOf(ofArray([map$1(ColumnValueRefs_Constant, cellDecoder), map$1(ColumnValueRefs_Sparse, Decode_intDictionary(cellDecoder))]));
|
|
81
81
|
const decoder_1 = object((get$) => {
|
|
82
82
|
let arg_1, objectArg, arg_3, objectArg_1, objectArg_2, objectArg_3;
|
|
83
|
-
const decodedHeader = defaultArg((arg_1 = resizeArray(decoder$
|
|
83
|
+
const decodedHeader = defaultArg((arg_1 = resizeArray(decoder$1), objectArg = get$.Optional, objectArg.Field("headers", arg_1)), []);
|
|
84
84
|
const values = new ArcTableValues(defaultArg((arg_3 = Decode_dictionary(int, columnDecoder), objectArg_1 = get$.Optional, objectArg_1.Field("columns", arg_3)), /* @__PURE__ */ new Map([])), valueMap, defaultArg((objectArg_2 = get$.Optional, objectArg_2.Field("rowCount", int)), 0));
|
|
85
85
|
return ArcTable.fromArcTableValues((objectArg_3 = get$.Required, objectArg_3.Field("name", string)), decodedHeader, values);
|
|
86
86
|
});
|
|
@@ -96,7 +96,7 @@ function decoderCompressedColumn(cellTable, table, columnIndex) {
|
|
|
96
96
|
const matchValue = array(decodeCell(cellTable)).Decode(helper, column);
|
|
97
97
|
if (matchValue.tag === /* Error */
|
|
98
98
|
1) {
|
|
99
|
-
matchValue.fields[0];
|
|
99
|
+
const err = matchValue.fields[0];
|
|
100
100
|
const rangeDecoder = object((get$) => {
|
|
101
101
|
let from;
|
|
102
102
|
const objectArg = get$.Required;
|
|
@@ -157,7 +157,7 @@ function arrayi(decoderi) {
|
|
|
157
157
|
}
|
|
158
158
|
function encoderCompressed(stringTable, oaTable, cellTable, table) {
|
|
159
159
|
const cellEncoder = (hash) => encodeCell(cellTable, getItemFromDict(table.Values.ValueMap, hash));
|
|
160
|
-
const values = toList(delay(() => append(singleton(["n", encodeString(stringTable, table.Name)]), delay(() => append(table.Headers.length !== 0 ? singleton(["h", list
|
|
160
|
+
const values = toList(delay(() => append(singleton(["n", encodeString(stringTable, table.Name)]), delay(() => append(table.Headers.length !== 0 ? singleton(["h", list(toList(delay(() => map(encoder$2, table.Headers))))]) : empty(), delay(() => table.Values.RowCount !== 0 ? append(singleton(["c", intDictionary((col) => {
|
|
161
161
|
if (col.tag === /* Sparse */
|
|
162
162
|
1) {
|
|
163
163
|
return intDictionary(cellEncoder, col.fields[0]);
|
|
@@ -171,10 +171,10 @@ function encoderCompressed(stringTable, oaTable, cellTable, table) {
|
|
|
171
171
|
return helpers.encodeSignedIntegralNumber(value);
|
|
172
172
|
}
|
|
173
173
|
})]);
|
|
174
|
-
})) : empty
|
|
174
|
+
})) : empty()))))));
|
|
175
175
|
return {
|
|
176
176
|
Encode(helpers_1) {
|
|
177
|
-
const arg = map
|
|
177
|
+
const arg = map((tupledArg) => [tupledArg[0], tupledArg[1].Encode(helpers_1)], values);
|
|
178
178
|
return helpers_1.encodeObject(arg);
|
|
179
179
|
}
|
|
180
180
|
};
|
|
@@ -183,7 +183,7 @@ function decoderCompressedV2Deprecated(stringTable, oaTable, cellTable) {
|
|
|
183
183
|
return object((get$) => {
|
|
184
184
|
let arg_1, objectArg, arg_3, objectArg_1, arg_5, objectArg_2;
|
|
185
185
|
let decodedHeader;
|
|
186
|
-
const collection = defaultArg((arg_1 = list(decoder$
|
|
186
|
+
const collection = defaultArg((arg_1 = list$1(decoder$1), objectArg = get$.Optional, objectArg.Field("h", arg_1)), empty$1());
|
|
187
187
|
decodedHeader = Array.from(collection);
|
|
188
188
|
const table = ArcTable.create((arg_3 = decodeString(stringTable), objectArg_1 = get$.Required, objectArg_1.Field("n", arg_3)), decodedHeader, []);
|
|
189
189
|
arg_5 = arrayi((columnIndex) => decoderCompressedColumn(cellTable, table, columnIndex)), objectArg_2 = get$.Optional, objectArg_2.Field("c", arg_5);
|
|
@@ -192,11 +192,11 @@ function decoderCompressedV2Deprecated(stringTable, oaTable, cellTable) {
|
|
|
192
192
|
}
|
|
193
193
|
function decoderCompressed(stringTable, oaTable, cellTable) {
|
|
194
194
|
const valueMap = /* @__PURE__ */ new Map([]);
|
|
195
|
-
const cellDecoder = map((i) => ensureCellHashInValueMap(item(i, cellTable), valueMap), int);
|
|
196
|
-
const columnDecoder = Decode_tryOneOf(ofArray([map(ColumnValueRefs_Constant, cellDecoder), map(ColumnValueRefs_Sparse, Decode_intDictionary(cellDecoder))]));
|
|
195
|
+
const cellDecoder = map$1((i) => ensureCellHashInValueMap(item(i, cellTable), valueMap), int);
|
|
196
|
+
const columnDecoder = Decode_tryOneOf(ofArray([map$1(ColumnValueRefs_Constant, cellDecoder), map$1(ColumnValueRefs_Sparse, Decode_intDictionary(cellDecoder))]));
|
|
197
197
|
const decoder_1 = object((get$) => {
|
|
198
198
|
let arg_1, objectArg, arg_3, objectArg_1, objectArg_2, arg_7, objectArg_3;
|
|
199
|
-
const decodedHeader = defaultArg((arg_1 = resizeArray(decoder$
|
|
199
|
+
const decodedHeader = defaultArg((arg_1 = resizeArray(decoder$1), objectArg = get$.Optional, objectArg.Field("h", arg_1)), []);
|
|
200
200
|
const values = new ArcTableValues(defaultArg((arg_3 = Decode_dictionary(int, columnDecoder), objectArg_1 = get$.Optional, objectArg_1.Field("c", arg_3)), /* @__PURE__ */ new Map([])), valueMap, defaultArg((objectArg_2 = get$.Optional, objectArg_2.Field("r", int)), 0));
|
|
201
201
|
return ArcTable.fromArcTableValues((arg_7 = decodeString(stringTable), objectArg_3 = get$.Required, objectArg_3.Field("n", arg_7)), decodedHeader, values);
|
|
202
202
|
});
|
|
@@ -1,22 +1,22 @@
|
|
|
1
|
-
import { toArray, map
|
|
1
|
+
import { toArray, map, sortBy } from '../../../node_modules/@fable-org/fable-library-js/Seq.js';
|
|
2
2
|
import { Dictionary_items, Dictionary_tryFind } from '../../Core/Helper/Collections.js';
|
|
3
3
|
import { comparePrimitives } from '../../../node_modules/@fable-org/fable-library-js/Util.js';
|
|
4
|
-
import { map, item } from '../../../node_modules/@fable-org/fable-library-js/Array.js';
|
|
5
|
-
import {
|
|
4
|
+
import { map as map$1, item } from '../../../node_modules/@fable-org/fable-library-js/Array.js';
|
|
5
|
+
import { encoderCompressed, decoderCompressed } from './CompositeCell.js';
|
|
6
6
|
import { array, object, int } from '../../fable_modules/Thoth.Json.Core.0.7.0/Decode.fs.js';
|
|
7
7
|
import { value } from '../../../node_modules/@fable-org/fable-library-js/Option.js';
|
|
8
8
|
import { addToDict } from '../../../node_modules/@fable-org/fable-library-js/MapUtil.js';
|
|
9
9
|
|
|
10
10
|
function arrayFromMap(otm) {
|
|
11
|
-
return toArray(map
|
|
11
|
+
return toArray(map((kv_1) => kv_1[0], sortBy((kv) => kv[1], Dictionary_items(otm), {
|
|
12
12
|
Compare: comparePrimitives
|
|
13
13
|
})));
|
|
14
14
|
}
|
|
15
15
|
function encoder(stringTable, oaTable, ot) {
|
|
16
|
-
const values = map((cc) => encoderCompressed(stringTable, oaTable, cc), ot);
|
|
16
|
+
const values = map$1((cc) => encoderCompressed(stringTable, oaTable, cc), ot);
|
|
17
17
|
return {
|
|
18
18
|
Encode(helpers) {
|
|
19
|
-
const arg = map((v) => v.Encode(helpers), values);
|
|
19
|
+
const arg = map$1((v) => v.Encode(helpers), values);
|
|
20
20
|
return helpers.encodeArray(arg);
|
|
21
21
|
}
|
|
22
22
|
};
|
|
@@ -1,13 +1,13 @@
|
|
|
1
|
-
import {
|
|
1
|
+
import { OntologyAnnotation_encoder, OntologyAnnotation_decoder } from '../OntologyAnnotation.js';
|
|
2
2
|
import { singleton, ofArray } from '../../../node_modules/@fable-org/fable-library-js/List.js';
|
|
3
|
-
import {
|
|
3
|
+
import { encoder as encoder$1, decoder as decoder$1, compressedEncoder, compressedDecoder } from '../Data.js';
|
|
4
4
|
import { list } from '../../fable_modules/Thoth.Json.Core.0.7.0/Encode.fs.js';
|
|
5
5
|
import { map } from '../../../node_modules/@fable-org/fable-library-js/Seq.js';
|
|
6
6
|
import { CompositeCell_FreeText, CompositeCell_Term, CompositeCell_Unitized, CompositeCell_Data } from '../../Core/Table/CompositeCell.js';
|
|
7
7
|
import { object, string, index } from '../../fable_modules/Thoth.Json.Core.0.7.0/Decode.fs.js';
|
|
8
8
|
import { toFail, printf } from '../../../node_modules/@fable-org/fable-library-js/String.js';
|
|
9
|
-
import {
|
|
10
|
-
import {
|
|
9
|
+
import { encodeOA, decodeOA } from './OATable.js';
|
|
10
|
+
import { encodeString, decodeString } from '../StringTable.js';
|
|
11
11
|
|
|
12
12
|
function encoder(cc) {
|
|
13
13
|
const oaToJsonString = OntologyAnnotation_encoder;
|
|
@@ -1,6 +1,6 @@
|
|
|
1
|
-
import {
|
|
1
|
+
import { OntologyAnnotation_encoder, OntologyAnnotation_decoder } from '../OntologyAnnotation.js';
|
|
2
2
|
import { empty, singleton } from '../../../node_modules/@fable-org/fable-library-js/List.js';
|
|
3
|
-
import {
|
|
3
|
+
import { encoder as encoder$1, decoder as decoder$1 } from './IOType.js';
|
|
4
4
|
import { list } from '../../fable_modules/Thoth.Json.Core.0.7.0/Encode.fs.js';
|
|
5
5
|
import { map } from '../../../node_modules/@fable-org/fable-library-js/Seq.js';
|
|
6
6
|
import { CompositeHeader_Characteristic, CompositeHeader_Parameter, CompositeHeader_Component, CompositeHeader_Factor, CompositeHeader_Input, CompositeHeader_Output, CompositeHeader_ProtocolType, CompositeHeader_ProtocolREF, CompositeHeader_ProtocolDescription, CompositeHeader_ProtocolUri, CompositeHeader_ProtocolVersion, CompositeHeader_Performer, CompositeHeader_Date, CompositeHeader_Comment, CompositeHeader_FreeText } from '../../Core/Table/CompositeHeader.js';
|
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
import { toString } from '../../../node_modules/@fable-org/fable-library-js/Types.js';
|
|
2
2
|
import { IOType } from '../../Core/Table/CompositeHeader.js';
|
|
3
|
-
import { andThen,
|
|
3
|
+
import { andThen, succeed, string } from '../../fable_modules/Thoth.Json.Core.0.7.0/Decode.fs.js';
|
|
4
4
|
|
|
5
5
|
function encoder(io) {
|
|
6
6
|
const value = toString(io);
|
|
@@ -1,22 +1,22 @@
|
|
|
1
|
-
import { toArray, map
|
|
2
|
-
import {
|
|
1
|
+
import { toArray, map, sortBy } from '../../../node_modules/@fable-org/fable-library-js/Seq.js';
|
|
2
|
+
import { Dictionary_items, Dictionary_tryFind } from '../../Core/Helper/Collections.js';
|
|
3
3
|
import { comparePrimitives } from '../../../node_modules/@fable-org/fable-library-js/Util.js';
|
|
4
|
-
import { map, item } from '../../../node_modules/@fable-org/fable-library-js/Array.js';
|
|
5
|
-
import {
|
|
4
|
+
import { map as map$1, item } from '../../../node_modules/@fable-org/fable-library-js/Array.js';
|
|
5
|
+
import { OntologyAnnotation_compressedEncoder, OntologyAnnotation_compressedDecoder } from '../OntologyAnnotation.js';
|
|
6
6
|
import { array, object, int } from '../../fable_modules/Thoth.Json.Core.0.7.0/Decode.fs.js';
|
|
7
7
|
import { value } from '../../../node_modules/@fable-org/fable-library-js/Option.js';
|
|
8
8
|
import { addToDict } from '../../../node_modules/@fable-org/fable-library-js/MapUtil.js';
|
|
9
9
|
|
|
10
10
|
function arrayFromMap(otm) {
|
|
11
|
-
return toArray(map
|
|
11
|
+
return toArray(map((kv_1) => kv_1[0], sortBy((kv) => kv[1], Dictionary_items(otm), {
|
|
12
12
|
Compare: comparePrimitives
|
|
13
13
|
})));
|
|
14
14
|
}
|
|
15
15
|
function encoder(stringTable, ot) {
|
|
16
|
-
const values = map((oa) => OntologyAnnotation_compressedEncoder(stringTable, oa), ot);
|
|
16
|
+
const values = map$1((oa) => OntologyAnnotation_compressedEncoder(stringTable, oa), ot);
|
|
17
17
|
return {
|
|
18
18
|
Encode(helpers) {
|
|
19
|
-
const arg = map((v) => v.Encode(helpers), values);
|
|
19
|
+
const arg = map$1((v) => v.Encode(helpers), values);
|
|
20
20
|
return helpers.encodeArray(arg);
|
|
21
21
|
}
|
|
22
22
|
};
|
|
@@ -1,15 +1,101 @@
|
|
|
1
|
-
import {
|
|
2
|
-
import {
|
|
3
|
-
import {
|
|
1
|
+
import { toString } from '../../../node_modules/@fable-org/fable-library-js/Types.js';
|
|
2
|
+
import { Organisation, Template } from '../../Core/Template.js';
|
|
3
|
+
import { andThen, succeed, string, object, guid, resizeArray, datetimeUtc, array } from '../../fable_modules/Thoth.Json.Core.0.7.0/Decode.fs.js';
|
|
4
|
+
import { encoder, decoder, encoderCompressed, decoderCompressed } from './ArcTable.js';
|
|
5
|
+
import { seq } from '../../fable_modules/Thoth.Json.Core.0.7.0/Encode.fs.js';
|
|
6
|
+
import { map } from '../../../node_modules/@fable-org/fable-library-js/Seq.js';
|
|
7
|
+
import { encoder as encoder$1, decoder as decoder$1 } from '../Person.js';
|
|
8
|
+
import { OntologyAnnotation_encoder, OntologyAnnotation_decoder } from '../OntologyAnnotation.js';
|
|
9
|
+
import { dateTime } from '../Encode.js';
|
|
4
10
|
import { unwrap } from '../../../node_modules/@fable-org/fable-library-js/Option.js';
|
|
5
|
-
import { decoder as decoder$1 } from '../Person.js';
|
|
6
|
-
import { OntologyAnnotation_decoder } from '../OntologyAnnotation.js';
|
|
7
11
|
import { Decode_datetime } from '../Decode.js';
|
|
12
|
+
import { toString as toString$1 } from '../../../node_modules/@fable-org/fable-library-js/Date.js';
|
|
13
|
+
import { map as map$1 } from '../../../node_modules/@fable-org/fable-library-js/Array.js';
|
|
8
14
|
|
|
15
|
+
const Template_Organisation_encoder = (arg) => {
|
|
16
|
+
const value = toString(arg);
|
|
17
|
+
return {
|
|
18
|
+
Encode(helpers) {
|
|
19
|
+
return helpers.encodeString(value);
|
|
20
|
+
}
|
|
21
|
+
};
|
|
22
|
+
};
|
|
9
23
|
const Template_Organisation_decoder = andThen((textValue) => succeed(Organisation.ofString(textValue)), string);
|
|
24
|
+
function Template_encoder(template) {
|
|
25
|
+
let value_1, copyOfStruct, value_3, value_4, value_5;
|
|
26
|
+
const values_3 = [["id", (value_1 = (copyOfStruct = template.Id, copyOfStruct), {
|
|
27
|
+
Encode(helpers) {
|
|
28
|
+
return helpers.encodeString(value_1);
|
|
29
|
+
}
|
|
30
|
+
})], ["table", encoder(template.Table)], ["name", (value_3 = template.Name, {
|
|
31
|
+
Encode(helpers_1) {
|
|
32
|
+
return helpers_1.encodeString(value_3);
|
|
33
|
+
}
|
|
34
|
+
})], ["description", (value_4 = template.Description, {
|
|
35
|
+
Encode(helpers_2) {
|
|
36
|
+
return helpers_2.encodeString(value_4);
|
|
37
|
+
}
|
|
38
|
+
})], ["organisation", Template_Organisation_encoder(template.Organisation)], ["version", (value_5 = template.Version, {
|
|
39
|
+
Encode(helpers_3) {
|
|
40
|
+
return helpers_3.encodeString(value_5);
|
|
41
|
+
}
|
|
42
|
+
})], ["authors", seq(map(encoder$1, template.Authors))], ["endpoint_repositories", seq(map(OntologyAnnotation_encoder, template.EndpointRepositories))], ["tags", seq(map(OntologyAnnotation_encoder, template.Tags))], ["last_updated", dateTime(template.LastUpdated)]];
|
|
43
|
+
return {
|
|
44
|
+
Encode(helpers_4) {
|
|
45
|
+
const arg = map((tupledArg) => [tupledArg[0], tupledArg[1].Encode(helpers_4)], values_3);
|
|
46
|
+
return helpers_4.encodeObject(arg);
|
|
47
|
+
}
|
|
48
|
+
};
|
|
49
|
+
}
|
|
10
50
|
const Template_decoder = object((get$) => {
|
|
11
51
|
let objectArg, objectArg_1, objectArg_2, objectArg_3, objectArg_4, objectArg_5, arg_13, objectArg_6, arg_15, objectArg_7, arg_17, objectArg_8, objectArg_9;
|
|
12
52
|
return Template.create((objectArg = get$.Required, objectArg.Field("id", guid)), (objectArg_1 = get$.Required, objectArg_1.Field("table", decoder)), (objectArg_2 = get$.Required, objectArg_2.Field("name", string)), (objectArg_3 = get$.Required, objectArg_3.Field("description", string)), (objectArg_4 = get$.Required, objectArg_4.Field("organisation", Template_Organisation_decoder)), (objectArg_5 = get$.Required, objectArg_5.Field("version", string)), unwrap((arg_13 = resizeArray(decoder$1), objectArg_6 = get$.Optional, objectArg_6.Field("authors", arg_13))), unwrap((arg_15 = resizeArray(OntologyAnnotation_decoder), objectArg_7 = get$.Optional, objectArg_7.Field("endpoint_repositories", arg_15))), unwrap((arg_17 = resizeArray(OntologyAnnotation_decoder), objectArg_8 = get$.Optional, objectArg_8.Field("tags", arg_17))), (objectArg_9 = get$.Required, objectArg_9.Field("last_updated", Decode_datetime)));
|
|
13
53
|
});
|
|
54
|
+
function Template_encoderCompressed(stringTable, oaTable, cellTable, template) {
|
|
55
|
+
let value_1, copyOfStruct, value_3, value_4, value_5, value_1_1;
|
|
56
|
+
const values_3 = [["id", (value_1 = (copyOfStruct = template.Id, copyOfStruct), {
|
|
57
|
+
Encode(helpers) {
|
|
58
|
+
return helpers.encodeString(value_1);
|
|
59
|
+
}
|
|
60
|
+
})], ["table", encoderCompressed(stringTable, oaTable, cellTable, template.Table)], ["name", (value_3 = template.Name, {
|
|
61
|
+
Encode(helpers_1) {
|
|
62
|
+
return helpers_1.encodeString(value_3);
|
|
63
|
+
}
|
|
64
|
+
})], ["description", (value_4 = template.Description, {
|
|
65
|
+
Encode(helpers_2) {
|
|
66
|
+
return helpers_2.encodeString(value_4);
|
|
67
|
+
}
|
|
68
|
+
})], ["organisation", Template_Organisation_encoder(template.Organisation)], ["version", (value_5 = template.Version, {
|
|
69
|
+
Encode(helpers_3) {
|
|
70
|
+
return helpers_3.encodeString(value_5);
|
|
71
|
+
}
|
|
72
|
+
})], ["authors", seq(map(encoder$1, template.Authors))], ["endpoint_repositories", seq(map(OntologyAnnotation_encoder, template.EndpointRepositories))], ["tags", seq(map(OntologyAnnotation_encoder, template.Tags))], ["last_updated", (value_1_1 = toString$1(template.LastUpdated, "O", {}), {
|
|
73
|
+
Encode(helpers_4) {
|
|
74
|
+
return helpers_4.encodeString(value_1_1);
|
|
75
|
+
}
|
|
76
|
+
})]];
|
|
77
|
+
return {
|
|
78
|
+
Encode(helpers_5) {
|
|
79
|
+
const arg = map((tupledArg) => [tupledArg[0], tupledArg[1].Encode(helpers_5)], values_3);
|
|
80
|
+
return helpers_5.encodeObject(arg);
|
|
81
|
+
}
|
|
82
|
+
};
|
|
83
|
+
}
|
|
84
|
+
function Template_decoderCompressed(stringTable, oaTable, cellTable) {
|
|
85
|
+
return object((get$) => {
|
|
86
|
+
let objectArg, arg_3, objectArg_1, objectArg_2, objectArg_3, objectArg_4, objectArg_5, arg_13, objectArg_6, arg_15, objectArg_7, arg_17, objectArg_8, objectArg_9;
|
|
87
|
+
return Template.create((objectArg = get$.Required, objectArg.Field("id", guid)), (arg_3 = decoderCompressed(stringTable, oaTable, cellTable), objectArg_1 = get$.Required, objectArg_1.Field("table", arg_3)), (objectArg_2 = get$.Required, objectArg_2.Field("name", string)), (objectArg_3 = get$.Required, objectArg_3.Field("description", string)), (objectArg_4 = get$.Required, objectArg_4.Field("organisation", Template_Organisation_decoder)), (objectArg_5 = get$.Required, objectArg_5.Field("version", string)), unwrap((arg_13 = resizeArray(decoder$1), objectArg_6 = get$.Optional, objectArg_6.Field("authors", arg_13))), unwrap((arg_15 = resizeArray(OntologyAnnotation_decoder), objectArg_7 = get$.Optional, objectArg_7.Field("endpoint_repositories", arg_15))), unwrap((arg_17 = resizeArray(OntologyAnnotation_decoder), objectArg_8 = get$.Optional, objectArg_8.Field("tags", arg_17))), (objectArg_9 = get$.Required, objectArg_9.Field("last_updated", datetimeUtc)));
|
|
88
|
+
});
|
|
89
|
+
}
|
|
90
|
+
function Templates_encoder(templates) {
|
|
91
|
+
const values = map$1(Template_encoder, templates);
|
|
92
|
+
return {
|
|
93
|
+
Encode(helpers) {
|
|
94
|
+
const arg = map$1((v) => v.Encode(helpers), values);
|
|
95
|
+
return helpers.encodeArray(arg);
|
|
96
|
+
}
|
|
97
|
+
};
|
|
98
|
+
}
|
|
99
|
+
const Templates_decoder = array(Template_decoder);
|
|
14
100
|
|
|
15
|
-
export { Template_Organisation_decoder, Template_decoder };
|
|
101
|
+
export { Template_Organisation_decoder, Template_Organisation_encoder, Template_decoder, Template_decoderCompressed, Template_encoder, Template_encoderCompressed, Templates_decoder, Templates_encoder };
|
|
@@ -1,15 +1,15 @@
|
|
|
1
1
|
import { choose, ofArray } from '../../node_modules/@fable-org/fable-library-js/List.js';
|
|
2
|
-
import {
|
|
3
|
-
import {
|
|
2
|
+
import { map, unwrap } from '../../node_modules/@fable-org/fable-library-js/Option.js';
|
|
3
|
+
import { ArcWorkflow__get_Identifier, ArcWorkflow__get_WorkflowType, ArcWorkflow__get_Title, ArcWorkflow__get_URI, ArcWorkflow__get_Description, ArcWorkflow__get_Version, ArcWorkflow__get_DataMap, ArcWorkflow__get_SubWorkflowIdentifiers, ArcWorkflow__get_Parameters, ArcWorkflow__get_Components, ArcWorkflow__get_Contacts, ArcWorkflow__get_Comments, ArcWorkflow_create_Z3BB02240 } from '../Core/ArcTypes.js';
|
|
4
4
|
import { tryInclude, tryIncludeSeq } from './Encode.js';
|
|
5
|
-
import {
|
|
6
|
-
import {
|
|
7
|
-
import {
|
|
8
|
-
import {
|
|
9
|
-
import {
|
|
10
|
-
import {
|
|
5
|
+
import { OntologyAnnotation_encoder, OntologyAnnotation_decoder } from './OntologyAnnotation.js';
|
|
6
|
+
import { encoder as encoder$1, decoder as decoder$3, encoderCompressed as encoderCompressed$1, decoderCompressed as decoderCompressed$1 } from './DataMap/DataMap.js';
|
|
7
|
+
import { encoder as encoder$2, decoder as decoder$1 } from './Process/ProtocolParameter.js';
|
|
8
|
+
import { encoder as encoder$3, decoder as decoder$2 } from './Process/Component.js';
|
|
9
|
+
import { encoder as encoder$4, decoder as decoder$4 } from './Person.js';
|
|
10
|
+
import { encoder as encoder$5, decoder as decoder$5 } from './Comment.js';
|
|
11
11
|
import { map as map$1 } from '../../node_modules/@fable-org/fable-library-js/Seq.js';
|
|
12
|
-
import { object,
|
|
12
|
+
import { object, string, resizeArray } from '../fable_modules/Thoth.Json.Core.0.7.0/Decode.fs.js';
|
|
13
13
|
|
|
14
14
|
function encoder(workflow) {
|
|
15
15
|
let value;
|
|
@@ -47,7 +47,7 @@ function encoder(workflow) {
|
|
|
47
47
|
}
|
|
48
48
|
const decoder = object((get$) => {
|
|
49
49
|
let objectArg, objectArg_1, objectArg_2, objectArg_3, objectArg_4, objectArg_5, arg_13, objectArg_6, arg_15, objectArg_7, arg_17, objectArg_8, objectArg_9, arg_21, objectArg_10, arg_23, objectArg_11;
|
|
50
|
-
return ArcWorkflow_create_Z3BB02240((objectArg = get$.Required, objectArg.Field("Identifier", string)), unwrap((objectArg_1 = get$.Optional, objectArg_1.Field("Title", string))), unwrap((objectArg_2 = get$.Optional, objectArg_2.Field("Description", string))), unwrap((objectArg_3 = get$.Optional, objectArg_3.Field("WorkflowType", OntologyAnnotation_decoder))), unwrap((objectArg_4 = get$.Optional, objectArg_4.Field("URI", string))), unwrap((objectArg_5 = get$.Optional, objectArg_5.Field("Version", string))), unwrap((arg_13 = resizeArray(string), objectArg_6 = get$.Optional, objectArg_6.Field("SubWorkflowIdentifiers", arg_13))), unwrap((arg_15 = resizeArray(decoder$
|
|
50
|
+
return ArcWorkflow_create_Z3BB02240((objectArg = get$.Required, objectArg.Field("Identifier", string)), unwrap((objectArg_1 = get$.Optional, objectArg_1.Field("Title", string))), unwrap((objectArg_2 = get$.Optional, objectArg_2.Field("Description", string))), unwrap((objectArg_3 = get$.Optional, objectArg_3.Field("WorkflowType", OntologyAnnotation_decoder))), unwrap((objectArg_4 = get$.Optional, objectArg_4.Field("URI", string))), unwrap((objectArg_5 = get$.Optional, objectArg_5.Field("Version", string))), unwrap((arg_13 = resizeArray(string), objectArg_6 = get$.Optional, objectArg_6.Field("SubWorkflowIdentifiers", arg_13))), unwrap((arg_15 = resizeArray(decoder$1), objectArg_7 = get$.Optional, objectArg_7.Field("Parameters", arg_15))), unwrap((arg_17 = resizeArray(decoder$2), objectArg_8 = get$.Optional, objectArg_8.Field("Components", arg_17))), unwrap((objectArg_9 = get$.Optional, objectArg_9.Field("DataMap", decoder$3))), unwrap((arg_21 = resizeArray(decoder$4), objectArg_10 = get$.Optional, objectArg_10.Field("Contacts", arg_21))), unwrap((arg_23 = resizeArray(decoder$5), objectArg_11 = get$.Optional, objectArg_11.Field("Comments", arg_23))));
|
|
51
51
|
});
|
|
52
52
|
function encoderCompressed(stringTable, oaTable, cellTable, workflow) {
|
|
53
53
|
let value;
|
|
@@ -86,7 +86,7 @@ function encoderCompressed(stringTable, oaTable, cellTable, workflow) {
|
|
|
86
86
|
function decoderCompressed(stringTable, oaTable, cellTable) {
|
|
87
87
|
return object((get$) => {
|
|
88
88
|
let objectArg, objectArg_1, objectArg_2, objectArg_3, objectArg_4, objectArg_5, arg_13, objectArg_6, arg_15, objectArg_7, arg_17, objectArg_8, arg_19, objectArg_9, arg_21, objectArg_10, arg_23, objectArg_11;
|
|
89
|
-
return ArcWorkflow_create_Z3BB02240((objectArg = get$.Required, objectArg.Field("Identifier", string)), unwrap((objectArg_1 = get$.Optional, objectArg_1.Field("Title", string))), unwrap((objectArg_2 = get$.Optional, objectArg_2.Field("Description", string))), unwrap((objectArg_3 = get$.Optional, objectArg_3.Field("WorkflowType", OntologyAnnotation_decoder))), unwrap((objectArg_4 = get$.Optional, objectArg_4.Field("URI", string))), unwrap((objectArg_5 = get$.Optional, objectArg_5.Field("Version", string))), unwrap((arg_13 = resizeArray(string), objectArg_6 = get$.Optional, objectArg_6.Field("SubWorkflowIdentifiers", arg_13))), unwrap((arg_15 = resizeArray(decoder$
|
|
89
|
+
return ArcWorkflow_create_Z3BB02240((objectArg = get$.Required, objectArg.Field("Identifier", string)), unwrap((objectArg_1 = get$.Optional, objectArg_1.Field("Title", string))), unwrap((objectArg_2 = get$.Optional, objectArg_2.Field("Description", string))), unwrap((objectArg_3 = get$.Optional, objectArg_3.Field("WorkflowType", OntologyAnnotation_decoder))), unwrap((objectArg_4 = get$.Optional, objectArg_4.Field("URI", string))), unwrap((objectArg_5 = get$.Optional, objectArg_5.Field("Version", string))), unwrap((arg_13 = resizeArray(string), objectArg_6 = get$.Optional, objectArg_6.Field("SubWorkflowIdentifiers", arg_13))), unwrap((arg_15 = resizeArray(decoder$1), objectArg_7 = get$.Optional, objectArg_7.Field("Parameters", arg_15))), unwrap((arg_17 = resizeArray(decoder$2), objectArg_8 = get$.Optional, objectArg_8.Field("Components", arg_17))), unwrap((arg_19 = decoderCompressed$1(stringTable, oaTable, cellTable), objectArg_9 = get$.Optional, objectArg_9.Field("DataMap", arg_19))), unwrap((arg_21 = resizeArray(decoder$4), objectArg_10 = get$.Optional, objectArg_10.Field("Contacts", arg_21))), unwrap((arg_23 = resizeArray(decoder$5), objectArg_11 = get$.Optional, objectArg_11.Field("Comments", arg_23))));
|
|
90
90
|
});
|
|
91
91
|
}
|
|
92
92
|
|