@monoes/monograph 1.5.6 → 1.5.7
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/README.md +25 -9
- package/dist/src/mcp-tools/impact.d.ts.map +1 -1
- package/dist/src/mcp-tools/impact.js +1 -10
- package/dist/src/mcp-tools/impact.js.map +1 -1
- package/dist/tsconfig.tsbuildinfo +1 -1
- package/package.json +12 -9
- package/.monomind/data/ranked-context.json +0 -5
- package/.monomind/loops/mastermind-review-1782162423447.json +0 -16
- package/.monomind/sessions/session-1777578175215.json +0 -15
- package/.monomind/sessions/session-1777823684507.json +0 -15
- package/.monomind/sessions/session-1777928944749.json +0 -15
- package/.monomind/sessions/session-1778052902210.json +0 -15
- package/.monomind/sessions/session-1778056744636.json +0 -15
- package/.monomind/sessions/session-1778061077599.json +0 -15
- package/.monomind/sessions/session-1778102154764.json +0 -15
- package/__tests__/analysis/shape-extractor.test.ts +0 -124
- package/__tests__/analysis/surprise-scorer.test.ts +0 -154
- package/__tests__/cache/extraction-cache.test.ts +0 -45
- package/__tests__/cli/ai-context.test.ts +0 -175
- package/__tests__/cli/augment.test.ts +0 -128
- package/__tests__/cli/doctor.test.ts +0 -125
- package/__tests__/cli/eval-server.test.ts +0 -89
- package/__tests__/cli/setup.test.ts +0 -178
- package/__tests__/cli/skill-gen.test.ts +0 -280
- package/__tests__/export/formats.test.ts +0 -82
- package/__tests__/fixtures/sample.c +0 -25
- package/__tests__/fixtures/sample.cpp +0 -32
- package/__tests__/fixtures/sample.dart +0 -34
- package/__tests__/fixtures/sample.kt +0 -30
- package/__tests__/fixtures/sample.php +0 -30
- package/__tests__/fixtures/sample.py +0 -11
- package/__tests__/fixtures/sample.rb +0 -26
- package/__tests__/fixtures/sample.swift +0 -42
- package/__tests__/fixtures/sample.ts +0 -17
- package/__tests__/fixtures/sample.vue +0 -40
- package/__tests__/groups/group-search.test.ts +0 -221
- package/__tests__/groups/group-sync.test.ts +0 -336
- package/__tests__/integration/build-atomicity.test.ts +0 -61
- package/__tests__/integration/call-attribution.test.ts +0 -116
- package/__tests__/integration/full-pipeline.test.ts +0 -64
- package/__tests__/integration/graph-report-freshness.test.ts +0 -53
- package/__tests__/integration/incremental-build.test.ts +0 -103
- package/__tests__/mcp-resources/resources.test.ts +0 -256
- package/__tests__/mcp-tools/api-impact.test.ts +0 -188
- package/__tests__/mcp-tools/context.test.ts +0 -130
- package/__tests__/mcp-tools/cypher.test.ts +0 -258
- package/__tests__/mcp-tools/detect-changes.test.ts +0 -114
- package/__tests__/mcp-tools/impact.test.ts +0 -133
- package/__tests__/mcp-tools/rename.test.ts +0 -117
- package/__tests__/mcp-tools/route-map.test.ts +0 -237
- package/__tests__/mcp-tools/shape-check.test.ts +0 -202
- package/__tests__/mcp-tools/tool-map.test.ts +0 -135
- package/__tests__/parsers/c.test.ts +0 -28
- package/__tests__/parsers/cpp.test.ts +0 -28
- package/__tests__/parsers/csharp.test.ts +0 -62
- package/__tests__/parsers/dart.test.ts +0 -28
- package/__tests__/parsers/kotlin.test.ts +0 -28
- package/__tests__/parsers/loader.test.ts +0 -14
- package/__tests__/parsers/php.test.ts +0 -28
- package/__tests__/parsers/python.test.ts +0 -32
- package/__tests__/parsers/ruby.test.ts +0 -33
- package/__tests__/parsers/swift.test.ts +0 -28
- package/__tests__/parsers/typescript.test.ts +0 -45
- package/__tests__/parsers/vue.test.ts +0 -28
- package/__tests__/pipeline/analysis.test.ts +0 -58
- package/__tests__/pipeline/phases/corpus-check.test.ts +0 -26
- package/__tests__/pipeline/phases/evidence.test.ts +0 -41
- package/__tests__/pipeline/phases/field-access.test.ts +0 -22
- package/__tests__/pipeline/phases/leiden.test.ts +0 -72
- package/__tests__/pipeline/phases/markdown.test.ts +0 -84
- package/__tests__/pipeline/phases/middleware-extractor.test.ts +0 -131
- package/__tests__/pipeline/phases/orm.test.ts +0 -379
- package/__tests__/pipeline/phases/processes.test.ts +0 -191
- package/__tests__/pipeline/phases/routes.test.ts +0 -195
- package/__tests__/pipeline/phases/scope-resolution.test.ts +0 -133
- package/__tests__/pipeline/phases/tools.test.ts +0 -161
- package/__tests__/pipeline/phases/variables.test.ts +0 -30
- package/__tests__/pipeline/phases/wildcard-synthesis.test.ts +0 -207
- package/__tests__/pipeline/phases.test.ts +0 -41
- package/__tests__/pipeline/runner.test.ts +0 -28
- package/__tests__/registry/repo-registry.test.ts +0 -127
- package/__tests__/reporting/graph-report.suggest.test.ts +0 -36
- package/__tests__/reporting/graph-report.test.ts +0 -165
- package/__tests__/search/ast-chunker.test.ts +0 -63
- package/__tests__/search/rrf.test.ts +0 -95
- package/__tests__/security/safe-fetch.test.ts +0 -41
- package/__tests__/security/sensitive-files.test.ts +0 -32
- package/__tests__/setup.ts +0 -1
- package/__tests__/skills/platform-skills.test.ts +0 -63
- package/__tests__/staleness/git-staleness.test.ts +0 -107
- package/__tests__/storage/db.test.ts +0 -37
- package/__tests__/storage/evidence-roundtrip.test.ts +0 -89
- package/__tests__/storage/stores.test.ts +0 -165
- package/__tests__/types.test.ts +0 -13
- package/__tests__/validation/extraction-validator.test.ts +0 -48
- package/__tests__/watch/watcher.test.ts +0 -31
- package/__tests__/web/analyze-api.test.ts +0 -66
- package/__tests__/web/api.test.ts +0 -210
- package/__tests__/web/mcp-http.test.ts +0 -67
- package/__tests__/web/react-ui.test.ts +0 -43
- package/__tests__/wiki/gist-publisher.test.ts +0 -66
- package/__tests__/wiki/providers.test.ts +0 -69
- package/__tests__/wiki/wiki-generator.test.ts +0 -260
- package/src/__tests__/analysis/benchmark.test.ts +0 -59
- package/src/__tests__/analysis/cluster-quality.test.ts +0 -106
- package/src/__tests__/analysis/corpus-health.test.ts +0 -33
- package/src/__tests__/analysis/dependency-health.test.ts +0 -105
- package/src/__tests__/analysis/file-classifier.test.ts +0 -50
- package/src/__tests__/analysis/node-similarity.test.ts +0 -81
- package/src/__tests__/cache/augment-cache.test.ts +0 -55
- package/src/__tests__/cli/check-update.test.ts +0 -42
- package/src/__tests__/cli/hooks-install.test.ts +0 -56
- package/src/__tests__/cli/hooks-marker.test.ts +0 -138
- package/src/__tests__/cli/hooks-status.test.ts +0 -42
- package/src/__tests__/export/adjacency-matrix.test.ts +0 -116
- package/src/__tests__/export/csv.test.ts +0 -39
- package/src/__tests__/export/dot.test.ts +0 -86
- package/src/__tests__/export/gexf.test.ts +0 -78
- package/src/__tests__/export/graphml.test.ts +0 -57
- package/src/__tests__/export/mermaid.test.ts +0 -89
- package/src/__tests__/graph/betweenness.test.ts +0 -89
- package/src/__tests__/graph/cycles.test.ts +0 -131
- package/src/__tests__/graph/dead-code.test.ts +0 -174
- package/src/__tests__/graph/dfs.test.ts +0 -62
- package/src/__tests__/graph/diff-summary.test.ts +0 -83
- package/src/__tests__/graph/edge-filter.test.ts +0 -129
- package/src/__tests__/graph/import-chain.test.ts +0 -111
- package/src/__tests__/graph/merge.test.ts +0 -151
- package/src/__tests__/graph/node-search.test.ts +0 -167
- package/src/__tests__/graph/normalize-id.test.ts +0 -102
- package/src/__tests__/graph/pagerank.test.ts +0 -96
- package/src/__tests__/graph/prune.test.ts +0 -110
- package/src/__tests__/graph/regex-search.test.ts +0 -166
- package/src/__tests__/graph/ripple-impact.test.ts +0 -73
- package/src/__tests__/graph/scc.test.ts +0 -85
- package/src/__tests__/graph/statistics.test.ts +0 -219
- package/src/__tests__/graph/subgraph.test.ts +0 -127
- package/src/__tests__/graph/topo-sort.test.ts +0 -110
- package/src/__tests__/graph/wcc.test.ts +0 -101
- package/src/__tests__/groups/grpc-extractor.test.ts +0 -47
- package/src/__tests__/groups/service-boundary.test.ts +0 -86
- package/src/__tests__/groups/topic-extractor.test.ts +0 -43
- package/src/__tests__/ingest/git-clone.test.ts +0 -128
- package/src/__tests__/ingest/query-memory.test.ts +0 -123
- package/src/__tests__/ingest/transcribe.test.ts +0 -58
- package/src/__tests__/ingest/url-ingest.test.ts +0 -48
- package/src/__tests__/mcp-resources/repo-context-resource.test.ts +0 -37
- package/src/__tests__/mcp-resources/repos-resource.test.ts +0 -71
- package/src/__tests__/mcp-resources/wiki-resource.test.ts +0 -52
- package/src/__tests__/mcp-tools/explain.test.ts +0 -46
- package/src/__tests__/mcp-tools/graph-query.test.ts +0 -45
- package/src/__tests__/mcp-tools/group-sync.test.ts +0 -8
- package/src/__tests__/mcp-tools/impact-filtering.test.ts +0 -48
- package/src/__tests__/mcp-tools/impact.risk.test.ts +0 -24
- package/src/__tests__/mcp-tools/list-repos.test.ts +0 -24
- package/src/__tests__/mcp-tools/neighbors.test.ts +0 -48
- package/src/__tests__/mcp-tools/query.test.ts +0 -42
- package/src/__tests__/parsers/language-parsers.test.ts +0 -52
- package/src/__tests__/parsers/named-bindings.test.ts +0 -73
- package/src/__tests__/pipeline/cluster-only.test.ts +0 -33
- package/src/__tests__/pipeline/phases/bridge-adapters/electron-ipc.test.ts +0 -87
- package/src/__tests__/pipeline/phases/bridge-adapters/tauri.test.ts +0 -116
- package/src/__tests__/pipeline/phases/bridge-adapters/wails.test.ts +0 -81
- package/src/__tests__/pipeline/phases/bridge-resolver.test.ts +0 -110
- package/src/__tests__/pipeline/phases/communities.cohesion.test.ts +0 -43
- package/src/__tests__/pipeline/phases/community-split.test.ts +0 -30
- package/src/__tests__/pipeline/phases/framework-detect.test.ts +0 -65
- package/src/__tests__/pipeline/phases/import-resolver.test.ts +0 -64
- package/src/__tests__/pipeline/phases/parse-arrow.test.ts +0 -33
- package/src/__tests__/pipeline/phases/parse-csharp.test.ts +0 -33
- package/src/__tests__/pipeline/phases/scan.monographignore.test.ts +0 -53
- package/src/__tests__/pipeline/phases/scan.negation.test.ts +0 -40
- package/src/__tests__/pipeline/phases/scope-resolution.go.test.ts +0 -34
- package/src/__tests__/pipeline/phases/scope-resolution.java.test.ts +0 -30
- package/src/__tests__/pipeline/phases/scope-resolution.rust.test.ts +0 -31
- package/src/__tests__/pipeline/phases/suggest-questions.test.ts +0 -46
- package/src/__tests__/pipeline/phases/surprises-scoring.test.ts +0 -46
- package/src/__tests__/pipeline/phases/variables-phase.test.ts +0 -78
- package/src/__tests__/pipeline/phases/wildcard-phase.test.ts +0 -99
- package/src/__tests__/pipeline/runner.parallel.test.ts +0 -78
- package/src/__tests__/reporting/graph-report-confidence.test.ts +0 -43
- package/src/__tests__/reporting/graph-report-gaps.test.ts +0 -41
- package/src/__tests__/scope-resolution/call-sites.test.ts +0 -89
- package/src/__tests__/scope-resolution/evidence-weights.test.ts +0 -49
- package/src/__tests__/search/diacritic.test.ts +0 -23
- package/src/__tests__/security/safe-fetch.test.ts +0 -125
- package/src/__tests__/skills/platform-skills.extra.test.ts +0 -36
- package/src/__tests__/web/api.clusters.test.ts +0 -65
- package/src/__tests__/web/api.file.test.ts +0 -44
- package/src/__tests__/web/api.grep.test.ts +0 -47
- package/src/__tests__/web/api.info.test.ts +0 -18
- package/src/__tests__/web/api.jobs.test.ts +0 -47
- package/src/__tests__/web/api.progress.test.ts +0 -25
- package/src/__tests__/web/api.stream.test.ts +0 -35
- package/src/__tests__/wiki/providers-reasoning.test.ts +0 -46
- package/src/__tests__/wiki/wiki-review-mode.test.ts +0 -22
- package/src/analysis/benchmark.ts +0 -132
- package/src/analysis/changed-files.ts +0 -73
- package/src/analysis/changed-workspaces.ts +0 -94
- package/src/analysis/churn-cache.ts +0 -179
- package/src/analysis/churn-trend.ts +0 -57
- package/src/analysis/churn.ts +0 -263
- package/src/analysis/cluster-quality.ts +0 -142
- package/src/analysis/combined.ts +0 -41
- package/src/analysis/corpus-health.ts +0 -41
- package/src/analysis/coverage-gaps.ts +0 -246
- package/src/analysis/dep-classification.ts +0 -167
- package/src/analysis/dependency-health.ts +0 -146
- package/src/analysis/duplicate-exports.ts +0 -110
- package/src/analysis/fallow-suppression.ts +0 -98
- package/src/analysis/feature-flags-config.ts +0 -47
- package/src/analysis/feature-flags.ts +0 -223
- package/src/analysis/file-classifier.ts +0 -87
- package/src/analysis/git-changed-files.ts +0 -62
- package/src/analysis/health-baseline.ts +0 -80
- package/src/analysis/issue-filters.ts +0 -56
- package/src/analysis/list.ts +0 -74
- package/src/analysis/node-similarity.ts +0 -115
- package/src/analysis/private-type-leaks.ts +0 -119
- package/src/analysis/progress.ts +0 -43
- package/src/analysis/project-state.ts +0 -95
- package/src/analysis/regression-config.ts +0 -36
- package/src/analysis/rule-overrides.ts +0 -81
- package/src/analysis/scripts.ts +0 -95
- package/src/analysis/shape-extractor.ts +0 -202
- package/src/analysis/since-duration.ts +0 -42
- package/src/analysis/suppression-context.ts +0 -95
- package/src/analysis/suppressions.ts +0 -80
- package/src/analysis/surprise-scorer.ts +0 -74
- package/src/analysis/targets.ts +0 -237
- package/src/analysis/unused-class-members.ts +0 -79
- package/src/analysis/workspace-filter.ts +0 -89
- package/src/analyze/boundary-analysis.ts +0 -129
- package/src/analyze/predicates/file.ts +0 -86
- package/src/analyze/predicates/import.ts +0 -90
- package/src/analyze/predicates/lifecycle.ts +0 -55
- package/src/analyze/unused-deps.ts +0 -70
- package/src/analyze/unused-exports.ts +0 -145
- package/src/analyze/unused-files.ts +0 -46
- package/src/api/production-override.ts +0 -63
- package/src/api/programmatic.ts +0 -118
- package/src/audit.ts +0 -234
- package/src/cache/augment-cache.ts +0 -63
- package/src/cache/extraction-cache.ts +0 -141
- package/src/check/filtering.ts +0 -78
- package/src/check/index.ts +0 -99
- package/src/check/output.ts +0 -79
- package/src/check/rules.ts +0 -61
- package/src/ci-template.ts +0 -84
- package/src/claude-cli.ts +0 -59
- package/src/cli/ai-context.ts +0 -193
- package/src/cli/augment.ts +0 -114
- package/src/cli/check-update.ts +0 -40
- package/src/cli/doctor.ts +0 -182
- package/src/cli/eval-server.ts +0 -126
- package/src/cli/hooks-install.ts +0 -202
- package/src/cli/setup.ts +0 -197
- package/src/cli/skill-gen.ts +0 -347
- package/src/commands/flags.ts +0 -72
- package/src/config/boundary-config.ts +0 -183
- package/src/config/cli-schema.ts +0 -81
- package/src/config/config-parsing.ts +0 -102
- package/src/config/duplicates-config.ts +0 -62
- package/src/config/external-plugin.ts +0 -77
- package/src/config/health-config.ts +0 -42
- package/src/config/ignore-exports-used-in-file.ts +0 -46
- package/src/config/migration-types.ts +0 -73
- package/src/config/output-format.ts +0 -24
- package/src/config/plugins/builtin.ts +0 -411
- package/src/config/plugins/registry.ts +0 -77
- package/src/config/plugins/types.ts +0 -14
- package/src/config/resolution.ts +0 -102
- package/src/config/rules.ts +0 -70
- package/src/config/schema-gen.ts +0 -115
- package/src/config/types.ts +0 -149
- package/src/config/used-class-members.ts +0 -53
- package/src/config/validate.ts +0 -108
- package/src/config/workspace.ts +0 -137
- package/src/coverage/cloud-client.ts +0 -111
- package/src/coverage/upload-inventory.ts +0 -84
- package/src/coverage/upload-source-maps.ts +0 -97
- package/src/discover/entry-points.ts +0 -51
- package/src/discover/infrastructure-entries.ts +0 -175
- package/src/duplicates/detect/concatenation.ts +0 -37
- package/src/duplicates/detect/extraction.ts +0 -107
- package/src/duplicates/detect/filtering.ts +0 -112
- package/src/duplicates/detect/lcp.ts +0 -27
- package/src/duplicates/detect/ranking.ts +0 -16
- package/src/duplicates/detect/statistics.ts +0 -69
- package/src/duplicates/detect/suffix-array.ts +0 -88
- package/src/duplicates/families.ts +0 -95
- package/src/duplicates/normalize.ts +0 -58
- package/src/duplicates/shingle-filter.ts +0 -37
- package/src/duplicates/token-types.ts +0 -62
- package/src/duplicates/tokenize/index.ts +0 -104
- package/src/error/fallow-error.ts +0 -94
- package/src/error.ts +0 -47
- package/src/export/adjacency-matrix.ts +0 -127
- package/src/export/analysis-json.ts +0 -87
- package/src/export/badge.ts +0 -105
- package/src/export/canvas.ts +0 -42
- package/src/export/codeclimate.ts +0 -201
- package/src/export/compact-health.ts +0 -119
- package/src/export/compact.ts +0 -83
- package/src/export/csv.ts +0 -33
- package/src/export/cypher.ts +0 -33
- package/src/export/dot.ts +0 -52
- package/src/export/gexf.ts +0 -59
- package/src/export/graphml.ts +0 -50
- package/src/export/html.ts +0 -548
- package/src/export/index.ts +0 -9
- package/src/export/json.ts +0 -36
- package/src/export/markdown.ts +0 -290
- package/src/export/mermaid.ts +0 -100
- package/src/export/obsidian.ts +0 -44
- package/src/export/sarif.ts +0 -245
- package/src/export/svg.ts +0 -68
- package/src/fix/deps.ts +0 -70
- package/src/fix/enum-members.ts +0 -103
- package/src/fix/export-surgery.ts +0 -197
- package/src/fix/exports.ts +0 -93
- package/src/fix/orchestrator.ts +0 -67
- package/src/graph/analyzer.ts +0 -69
- package/src/graph/author-analytics.ts +0 -217
- package/src/graph/baseline.ts +0 -432
- package/src/graph/clone-families.ts +0 -132
- package/src/graph/codeowners-extended.ts +0 -114
- package/src/graph/codeowners-gitlab.ts +0 -150
- package/src/graph/codeowners.ts +0 -217
- package/src/graph/complexity.ts +0 -200
- package/src/graph/cross-reference-findings.ts +0 -85
- package/src/graph/cross-reference.ts +0 -139
- package/src/graph/cycle-detection.ts +0 -311
- package/src/graph/cycles.ts +0 -222
- package/src/graph/dead-code.ts +0 -128
- package/src/graph/dependency-closure.ts +0 -126
- package/src/graph/dfs.ts +0 -118
- package/src/graph/diff.ts +0 -92
- package/src/graph/duplication-stats.ts +0 -79
- package/src/graph/edge-filter.ts +0 -117
- package/src/graph/explain.ts +0 -133
- package/src/graph/external-style-usage.ts +0 -81
- package/src/graph/health-score.ts +0 -179
- package/src/graph/hotspots.ts +0 -219
- package/src/graph/import-chain.ts +0 -148
- package/src/graph/loader.ts +0 -44
- package/src/graph/maintainability.ts +0 -156
- package/src/graph/merge.ts +0 -174
- package/src/graph/mirrored-dirs.ts +0 -202
- package/src/graph/narrowing.ts +0 -92
- package/src/graph/node-search.ts +0 -201
- package/src/graph/node-types.ts +0 -67
- package/src/graph/normalize-id.ts +0 -138
- package/src/graph/pagerank.ts +0 -165
- package/src/graph/prune.ts +0 -95
- package/src/graph/re-exports/propagate.ts +0 -95
- package/src/graph/reachability.ts +0 -99
- package/src/graph/regex-search.ts +0 -232
- package/src/graph/regression.ts +0 -199
- package/src/graph/resolve/discover-types.ts +0 -45
- package/src/graph/resolve/dynamic-imports.ts +0 -102
- package/src/graph/resolve/fallbacks.ts +0 -79
- package/src/graph/resolve/index.ts +0 -68
- package/src/graph/resolve/path-info.ts +0 -41
- package/src/graph/resolve/re-exports.ts +0 -14
- package/src/graph/resolve/react-native.ts +0 -27
- package/src/graph/resolve/require-imports.ts +0 -18
- package/src/graph/resolve/specifier.ts +0 -120
- package/src/graph/resolve/static-imports.ts +0 -14
- package/src/graph/resolve/types.ts +0 -108
- package/src/graph/resolve/upgrades.ts +0 -32
- package/src/graph/ripple-impact.ts +0 -131
- package/src/graph/risk-profile.ts +0 -179
- package/src/graph/statistics.ts +0 -165
- package/src/graph/stats.ts +0 -157
- package/src/graph/subgraph.ts +0 -162
- package/src/graph/topo-sort.ts +0 -171
- package/src/graph/wcc.ts +0 -187
- package/src/groups/contract-bridge.ts +0 -103
- package/src/groups/contract-registry.ts +0 -263
- package/src/groups/group-config.ts +0 -108
- package/src/groups/group-search.ts +0 -139
- package/src/groups/group-sync.ts +0 -82
- package/src/groups/grpc-extractor.ts +0 -64
- package/src/groups/service-boundary.ts +0 -119
- package/src/groups/topic-extractor.ts +0 -90
- package/src/health/analysis-counts-snapshot.ts +0 -57
- package/src/health/analysis-counts.ts +0 -70
- package/src/health/complexity-findings.ts +0 -115
- package/src/health/distribution-thresholds.ts +0 -54
- package/src/health/grouping.ts +0 -138
- package/src/health/health-grouping.ts +0 -86
- package/src/health/health-report-types.ts +0 -165
- package/src/health/health-report.ts +0 -81
- package/src/health/health-score.ts +0 -65
- package/src/health/hotspot-utils.ts +0 -55
- package/src/health/hotspots.ts +0 -104
- package/src/health/large-functions.ts +0 -34
- package/src/health/ownership-metrics.ts +0 -61
- package/src/health/ownership-risk.ts +0 -98
- package/src/health/ownership.ts +0 -174
- package/src/health/quality-gate.ts +0 -57
- package/src/health/risk-profile.ts +0 -39
- package/src/health/runtime-coverage-report.ts +0 -101
- package/src/health/runtime-coverage.ts +0 -71
- package/src/health/scores.ts +0 -72
- package/src/health/scoring-types.ts +0 -48
- package/src/health/target-thresholds.ts +0 -92
- package/src/health/target-types.ts +0 -54
- package/src/health/targets.ts +0 -151
- package/src/health/timings.ts +0 -86
- package/src/health/trend-types.ts +0 -57
- package/src/health/trends.ts +0 -86
- package/src/health/vital-signs-compute.ts +0 -108
- package/src/health/vital-signs-snapshot.ts +0 -72
- package/src/health/vital-signs.ts +0 -101
- package/src/index.ts +0 -111
- package/src/ingest/git-clone.ts +0 -246
- package/src/ingest/query-memory.ts +0 -132
- package/src/ingest/transcribe.ts +0 -254
- package/src/ingest/url-ingest.ts +0 -87
- package/src/init/agent-hooks.ts +0 -86
- package/src/init/git-hooks.ts +0 -71
- package/src/init/project-detection.ts +0 -105
- package/src/license/manager.ts +0 -120
- package/src/lsp/code-actions.ts +0 -127
- package/src/lsp/code-lens.ts +0 -56
- package/src/lsp/diagnostics-ext.ts +0 -150
- package/src/lsp/diagnostics-push.ts +0 -103
- package/src/lsp/diagnostics.ts +0 -98
- package/src/lsp/hover.ts +0 -64
- package/src/lsp/server.ts +0 -254
- package/src/mcp/params.ts +0 -201
- package/src/mcp/resources.ts +0 -124
- package/src/mcp/tool-builders.ts +0 -203
- package/src/mcp-resources/communities-resource.ts +0 -72
- package/src/mcp-resources/graph-resource.ts +0 -14
- package/src/mcp-resources/index.ts +0 -9
- package/src/mcp-resources/named-cluster-resource.ts +0 -35
- package/src/mcp-resources/named-process-resource.ts +0 -26
- package/src/mcp-resources/processes-resource.ts +0 -67
- package/src/mcp-resources/repo-context-resource.ts +0 -36
- package/src/mcp-resources/repos-resource.ts +0 -21
- package/src/mcp-resources/schema-resource.ts +0 -46
- package/src/mcp-resources/wiki-resource.ts +0 -23
- package/src/mcp-tools/api-impact.ts +0 -181
- package/src/mcp-tools/context.ts +0 -111
- package/src/mcp-tools/cypher.ts +0 -29
- package/src/mcp-tools/detect-changes.ts +0 -116
- package/src/mcp-tools/explain.ts +0 -65
- package/src/mcp-tools/graph-query.ts +0 -128
- package/src/mcp-tools/group-list.ts +0 -88
- package/src/mcp-tools/group-query.ts +0 -26
- package/src/mcp-tools/group-sync.ts +0 -32
- package/src/mcp-tools/impact.ts +0 -202
- package/src/mcp-tools/index.ts +0 -21
- package/src/mcp-tools/list-repos.ts +0 -38
- package/src/mcp-tools/neighbors.ts +0 -80
- package/src/mcp-tools/query.ts +0 -86
- package/src/mcp-tools/rename.ts +0 -118
- package/src/mcp-tools/route-map.ts +0 -98
- package/src/mcp-tools/serve.ts +0 -41
- package/src/mcp-tools/shape-check.ts +0 -182
- package/src/mcp-tools/staleness.ts +0 -13
- package/src/mcp-tools/tool-map.ts +0 -66
- package/src/mcp-tools/wiki-build.ts +0 -37
- package/src/mcp-tools/wiki.ts +0 -28
- package/src/migrate/jscpd.ts +0 -78
- package/src/migrate/jsonc-gen.ts +0 -38
- package/src/migrate/knip.ts +0 -126
- package/src/migrate/toml-gen.ts +0 -48
- package/src/parsers/c.ts +0 -31
- package/src/parsers/cpp.ts +0 -29
- package/src/parsers/csharp.ts +0 -43
- package/src/parsers/dart.ts +0 -39
- package/src/parsers/extractor.ts +0 -202
- package/src/parsers/go.ts +0 -27
- package/src/parsers/java.ts +0 -27
- package/src/parsers/kotlin.ts +0 -36
- package/src/parsers/language-config.ts +0 -28
- package/src/parsers/language-parsers.ts +0 -120
- package/src/parsers/loader.ts +0 -149
- package/src/parsers/named-bindings.ts +0 -63
- package/src/parsers/php.ts +0 -37
- package/src/parsers/python.ts +0 -26
- package/src/parsers/ruby.ts +0 -39
- package/src/parsers/rust.ts +0 -25
- package/src/parsers/swift.ts +0 -28
- package/src/parsers/typescript.ts +0 -41
- package/src/parsers/vue.ts +0 -79
- package/src/pipeline/cluster-only.ts +0 -64
- package/src/pipeline/effort.ts +0 -50
- package/src/pipeline/orchestrator.ts +0 -384
- package/src/pipeline/phases/boundary.ts +0 -151
- package/src/pipeline/phases/bridge-adapters/electron-ipc.ts +0 -91
- package/src/pipeline/phases/bridge-adapters/registry.ts +0 -14
- package/src/pipeline/phases/bridge-adapters/tauri.ts +0 -103
- package/src/pipeline/phases/bridge-adapters/types.ts +0 -31
- package/src/pipeline/phases/bridge-adapters/wails.ts +0 -33
- package/src/pipeline/phases/bridge-resolver.ts +0 -77
- package/src/pipeline/phases/call-site-extractors.ts +0 -177
- package/src/pipeline/phases/communities.ts +0 -183
- package/src/pipeline/phases/contextual-proximity.ts +0 -88
- package/src/pipeline/phases/cross-file.ts +0 -116
- package/src/pipeline/phases/docs-parse.ts +0 -307
- package/src/pipeline/phases/evidence.ts +0 -9
- package/src/pipeline/phases/field-access.ts +0 -49
- package/src/pipeline/phases/framework-detect.ts +0 -109
- package/src/pipeline/phases/god-nodes.ts +0 -163
- package/src/pipeline/phases/import-resolver.ts +0 -114
- package/src/pipeline/phases/leiden.ts +0 -77
- package/src/pipeline/phases/llm-extract.ts +0 -178
- package/src/pipeline/phases/markdown.ts +0 -121
- package/src/pipeline/phases/middleware-extractor.ts +0 -127
- package/src/pipeline/phases/module-resolution.ts +0 -294
- package/src/pipeline/phases/mro.ts +0 -56
- package/src/pipeline/phases/orm.ts +0 -503
- package/src/pipeline/phases/parse.ts +0 -222
- package/src/pipeline/phases/pdf-parse.ts +0 -133
- package/src/pipeline/phases/processes.ts +0 -249
- package/src/pipeline/phases/re-export-propagation.ts +0 -160
- package/src/pipeline/phases/reachability.ts +0 -156
- package/src/pipeline/phases/routes.ts +0 -350
- package/src/pipeline/phases/scan.ts +0 -133
- package/src/pipeline/phases/scope-resolution.ts +0 -442
- package/src/pipeline/phases/structure.ts +0 -68
- package/src/pipeline/phases/suggest.ts +0 -92
- package/src/pipeline/phases/surprises.ts +0 -83
- package/src/pipeline/phases/tools.ts +0 -180
- package/src/pipeline/phases/variables-phase.ts +0 -37
- package/src/pipeline/phases/variables.ts +0 -67
- package/src/pipeline/phases/wildcard-phase.ts +0 -50
- package/src/pipeline/phases/wildcard-synthesis.ts +0 -214
- package/src/pipeline/progress.ts +0 -58
- package/src/pipeline/runner.ts +0 -88
- package/src/pipeline/types.ts +0 -41
- package/src/query/cypher-parser.ts +0 -450
- package/src/registry/repo-registry.ts +0 -125
- package/src/regression/baseline-deltas.ts +0 -215
- package/src/regression/baseline.ts +0 -76
- package/src/regression/counts.ts +0 -87
- package/src/regression/outcome.ts +0 -78
- package/src/regression/tolerance.ts +0 -35
- package/src/report/attributed-duplication.ts +0 -112
- package/src/report/badge-svg.ts +0 -100
- package/src/report/cross-ref-human.ts +0 -50
- package/src/report/duplication-grouping.ts +0 -74
- package/src/report/grouping.ts +0 -137
- package/src/report/human-check.ts +0 -291
- package/src/report/human-dupes.ts +0 -142
- package/src/report/human-health.ts +0 -195
- package/src/report/human.ts +0 -120
- package/src/report/json-actions.ts +0 -91
- package/src/report/json-builders.ts +0 -70
- package/src/report/json-schema.ts +0 -75
- package/src/report/number-format.ts +0 -91
- package/src/report/output-grouped.ts +0 -102
- package/src/report/pipeline-perf.ts +0 -56
- package/src/report/trace-human.ts +0 -127
- package/src/reporting/graph-report.ts +0 -431
- package/src/results/fallow-results.ts +0 -152
- package/src/results/types.ts +0 -149
- package/src/scope-resolution/evidence-weights.ts +0 -41
- package/src/search/ast-chunker.ts +0 -206
- package/src/search/diacritic.ts +0 -7
- package/src/search/hybrid-query.ts +0 -65
- package/src/search/rrf.ts +0 -51
- package/src/security/safe-fetch.ts +0 -113
- package/src/security/sensitive-files.ts +0 -24
- package/src/skills/platform-skills.ts +0 -233
- package/src/staleness/git-staleness.ts +0 -66
- package/src/storage/db.ts +0 -110
- package/src/storage/edge-store.ts +0 -103
- package/src/storage/file-cache.ts +0 -78
- package/src/storage/fts-store.ts +0 -385
- package/src/storage/node-store.ts +0 -209
- package/src/storage/schema.ts +0 -171
- package/src/storage/suppressions.ts +0 -145
- package/src/storage/unlinked-refs.ts +0 -117
- package/src/types.ts +0 -197
- package/src/validation/extraction-validator.ts +0 -54
- package/src/watch/watcher.ts +0 -160
- package/src/web/analyze-api.ts +0 -146
- package/src/web/api.ts +0 -584
- package/src/web/async-jobs.ts +0 -109
- package/src/web/mcp-http.ts +0 -227
- package/src/web/react-ui.ts +0 -78
- package/src/web/server.ts +0 -90
- package/src/web/ui/index.html +0 -204
- package/src/wiki/gist-publisher.ts +0 -76
- package/src/wiki/prompt-builder.ts +0 -35
- package/src/wiki/providers.ts +0 -134
- package/src/wiki/wiki-generator.ts +0 -223
- package/src/wiki/wiki-store.ts +0 -49
- package/tsconfig.json +0 -11
- package/vitest.config.ts +0 -20
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-
visited.add(id);
|
|
32
|
-
|
|
33
|
-
visitor({ id, depth });
|
|
34
|
-
|
|
35
|
-
if (depth < maxDepth) {
|
|
36
|
-
const neighbors = adjacency.get(id) ?? [];
|
|
37
|
-
// Push in reverse order so left-most neighbor is processed first (DFS left-to-right order)
|
|
38
|
-
for (let i = neighbors.length - 1; i >= 0; i--) {
|
|
39
|
-
const neighbor = neighbors[i]!;
|
|
40
|
-
if (!visited.has(neighbor)) {
|
|
41
|
-
stack.push({ id: neighbor, depth: depth + 1 });
|
|
42
|
-
}
|
|
43
|
-
}
|
|
44
|
-
}
|
|
45
|
-
}
|
|
46
|
-
}
|
|
47
|
-
|
|
48
|
-
/** Collect all reachable nodes from startId via DFS, returning structured result. */
|
|
49
|
-
export function dfsCollect(
|
|
50
|
-
startId: string,
|
|
51
|
-
adjacency: Map<string, string[]>,
|
|
52
|
-
options: DfsOptions = {},
|
|
53
|
-
): DfsResult {
|
|
54
|
-
const visited: DfsNode[] = [];
|
|
55
|
-
let maxReachedDepth = 0;
|
|
56
|
-
dfsTraversal(startId, adjacency, (node) => {
|
|
57
|
-
visited.push(node);
|
|
58
|
-
if (node.depth > maxReachedDepth) maxReachedDepth = node.depth;
|
|
59
|
-
}, options);
|
|
60
|
-
return { visited, maxDepth: maxReachedDepth, nodeCount: visited.length };
|
|
61
|
-
}
|
|
62
|
-
|
|
63
|
-
/** BFS level-order traversal — useful when shortest-path distance matters more than DFS order. */
|
|
64
|
-
export function bfsTraversal(
|
|
65
|
-
startId: string,
|
|
66
|
-
adjacency: Map<string, string[]>,
|
|
67
|
-
visitor: (node: DfsNode) => void,
|
|
68
|
-
options: DfsOptions = {},
|
|
69
|
-
): void {
|
|
70
|
-
if (!adjacency.has(startId)) return;
|
|
71
|
-
|
|
72
|
-
const { maxDepth = Infinity } = options;
|
|
73
|
-
const visited = new Set<string>([startId]);
|
|
74
|
-
const queue: Array<{ id: string; depth: number }> = [{ id: startId, depth: 0 }];
|
|
75
|
-
|
|
76
|
-
while (queue.length > 0) {
|
|
77
|
-
const { id, depth } = queue.shift()!;
|
|
78
|
-
visitor({ id, depth });
|
|
79
|
-
|
|
80
|
-
if (depth < maxDepth) {
|
|
81
|
-
const neighbors = adjacency.get(id) ?? [];
|
|
82
|
-
for (let i = 0; i < neighbors.length; i++) {
|
|
83
|
-
const neighbor = neighbors[i]!;
|
|
84
|
-
if (!visited.has(neighbor)) {
|
|
85
|
-
visited.add(neighbor);
|
|
86
|
-
queue.push({ id: neighbor, depth: depth + 1 });
|
|
87
|
-
}
|
|
88
|
-
}
|
|
89
|
-
}
|
|
90
|
-
}
|
|
91
|
-
}
|
|
92
|
-
|
|
93
|
-
/**
|
|
94
|
-
* Format a DfsResult as structured text for LLM consumption.
|
|
95
|
-
* Groups nodes by depth level for easy reading.
|
|
96
|
-
*/
|
|
97
|
-
export function formatDfsResult(result: DfsResult, startId: string): string {
|
|
98
|
-
if (result.nodeCount === 0) return `No nodes reachable from "${startId}".`;
|
|
99
|
-
|
|
100
|
-
const byDepth = new Map<number, string[]>();
|
|
101
|
-
for (const node of result.visited) {
|
|
102
|
-
let bucket = byDepth.get(node.depth);
|
|
103
|
-
if (!bucket) { bucket = []; byDepth.set(node.depth, bucket); }
|
|
104
|
-
bucket.push(node.id);
|
|
105
|
-
}
|
|
106
|
-
|
|
107
|
-
const lines: string[] = [
|
|
108
|
-
`DFS from "${startId}": ${result.nodeCount} nodes, max depth ${result.maxDepth}`,
|
|
109
|
-
'',
|
|
110
|
-
];
|
|
111
|
-
// Iterate in depth order
|
|
112
|
-
const depths = Array.from(byDepth.keys()).sort((a, b) => a - b);
|
|
113
|
-
for (const depth of depths) {
|
|
114
|
-
const ids = byDepth.get(depth)!;
|
|
115
|
-
lines.push(` depth ${depth}: ${ids.join(', ')}`);
|
|
116
|
-
}
|
|
117
|
-
return lines.join('\n');
|
|
118
|
-
}
|
package/src/graph/diff.ts
DELETED
|
@@ -1,92 +0,0 @@
|
|
|
1
|
-
import type { MonographNode, MonographEdge } from '../types.js';
|
|
2
|
-
|
|
3
|
-
export interface GraphSnapshot {
|
|
4
|
-
nodes: MonographNode[];
|
|
5
|
-
edges: MonographEdge[];
|
|
6
|
-
capturedAt: string;
|
|
7
|
-
}
|
|
8
|
-
|
|
9
|
-
export interface GraphDiff {
|
|
10
|
-
newNodes: MonographNode[];
|
|
11
|
-
removedNodes: MonographNode[];
|
|
12
|
-
newEdges: MonographEdge[];
|
|
13
|
-
removedEdges: MonographEdge[];
|
|
14
|
-
modifiedNodes: Array<{ before: MonographNode; after: MonographNode }>;
|
|
15
|
-
/** Human-readable summary, e.g. "3 new nodes, 5 new edges, 1 node removed". */
|
|
16
|
-
summary: string;
|
|
17
|
-
}
|
|
18
|
-
|
|
19
|
-
function buildDiffSummary(
|
|
20
|
-
newNodes: MonographNode[],
|
|
21
|
-
removedNodes: MonographNode[],
|
|
22
|
-
newEdges: MonographEdge[],
|
|
23
|
-
removedEdges: MonographEdge[],
|
|
24
|
-
modifiedNodes: Array<{ before: MonographNode; after: MonographNode }>,
|
|
25
|
-
): string {
|
|
26
|
-
const parts: string[] = [];
|
|
27
|
-
if (newNodes.length > 0) parts.push(`${newNodes.length} new node${newNodes.length !== 1 ? 's' : ''}`);
|
|
28
|
-
if (newEdges.length > 0) parts.push(`${newEdges.length} new edge${newEdges.length !== 1 ? 's' : ''}`);
|
|
29
|
-
if (removedNodes.length > 0) parts.push(`${removedNodes.length} node${removedNodes.length !== 1 ? 's' : ''} removed`);
|
|
30
|
-
if (removedEdges.length > 0) parts.push(`${removedEdges.length} edge${removedEdges.length !== 1 ? 's' : ''} removed`);
|
|
31
|
-
if (modifiedNodes.length > 0) parts.push(`${modifiedNodes.length} node${modifiedNodes.length !== 1 ? 's' : ''} modified`);
|
|
32
|
-
return parts.length > 0 ? parts.join(', ') : 'no changes';
|
|
33
|
-
}
|
|
34
|
-
|
|
35
|
-
export function diffSnapshots(before: GraphSnapshot, after: GraphSnapshot): GraphDiff {
|
|
36
|
-
const beforeNodeIds = new Map(before.nodes.map(n => [n.id, n]));
|
|
37
|
-
const afterNodeIds = new Map(after.nodes.map(n => [n.id, n]));
|
|
38
|
-
// Key edges by sourceId+relation+targetId — stable across snapshots regardless of synthetic id
|
|
39
|
-
const edgeKey = (e: MonographEdge) => `${e.sourceId}|${e.relation}|${e.targetId}`;
|
|
40
|
-
const beforeEdgeKeys = new Set(before.edges.map(edgeKey));
|
|
41
|
-
const afterEdgeKeys = new Set(after.edges.map(edgeKey));
|
|
42
|
-
|
|
43
|
-
const newNodes = after.nodes.filter(n => !beforeNodeIds.has(n.id));
|
|
44
|
-
const removedNodes = before.nodes.filter(n => !afterNodeIds.has(n.id));
|
|
45
|
-
const newEdges = after.edges.filter(e => !beforeEdgeKeys.has(edgeKey(e)));
|
|
46
|
-
const removedEdges = before.edges.filter(e => !afterEdgeKeys.has(edgeKey(e)));
|
|
47
|
-
const modifiedNodes = after.nodes
|
|
48
|
-
.filter(n => beforeNodeIds.has(n.id))
|
|
49
|
-
.filter(n => JSON.stringify(n) !== JSON.stringify(beforeNodeIds.get(n.id)))
|
|
50
|
-
.map(n => ({ before: beforeNodeIds.get(n.id)!, after: n }));
|
|
51
|
-
|
|
52
|
-
return {
|
|
53
|
-
newNodes,
|
|
54
|
-
removedNodes,
|
|
55
|
-
newEdges,
|
|
56
|
-
removedEdges,
|
|
57
|
-
modifiedNodes,
|
|
58
|
-
summary: buildDiffSummary(newNodes, removedNodes, newEdges, removedEdges, modifiedNodes),
|
|
59
|
-
};
|
|
60
|
-
}
|
|
61
|
-
|
|
62
|
-
export function snapshotFromDb(db: import('../storage/db.js').MonographDb): GraphSnapshot {
|
|
63
|
-
const rawNodes = db.prepare(`
|
|
64
|
-
SELECT id, label, name,
|
|
65
|
-
norm_label AS normLabel,
|
|
66
|
-
file_path AS filePath,
|
|
67
|
-
start_line AS startLine,
|
|
68
|
-
end_line AS endLine,
|
|
69
|
-
community_id AS communityId,
|
|
70
|
-
is_exported AS isExported,
|
|
71
|
-
language, properties
|
|
72
|
-
FROM nodes
|
|
73
|
-
`).all() as Array<Record<string, unknown>>;
|
|
74
|
-
|
|
75
|
-
const rawEdges = db.prepare(`
|
|
76
|
-
SELECT id,
|
|
77
|
-
source_id AS sourceId,
|
|
78
|
-
target_id AS targetId,
|
|
79
|
-
relation, confidence,
|
|
80
|
-
confidence_score AS confidenceScore
|
|
81
|
-
FROM edges
|
|
82
|
-
`).all() as Array<Record<string, unknown>>;
|
|
83
|
-
|
|
84
|
-
const nodes: MonographNode[] = rawNodes.map(r => ({
|
|
85
|
-
...r,
|
|
86
|
-
isExported: Boolean(r['isExported']),
|
|
87
|
-
} as MonographNode));
|
|
88
|
-
|
|
89
|
-
const edges = rawEdges as unknown as MonographEdge[];
|
|
90
|
-
|
|
91
|
-
return { nodes, edges, capturedAt: new Date().toISOString() };
|
|
92
|
-
}
|
|
@@ -1,79 +0,0 @@
|
|
|
1
|
-
export interface DuplicationStats {
|
|
2
|
-
totalFiles: number;
|
|
3
|
-
filesWithClones: number;
|
|
4
|
-
totalLines: number;
|
|
5
|
-
duplicatedLines: number;
|
|
6
|
-
totalTokens: number;
|
|
7
|
-
duplicatedTokens: number;
|
|
8
|
-
cloneGroups: number;
|
|
9
|
-
cloneInstances: number;
|
|
10
|
-
duplicationPct: number;
|
|
11
|
-
}
|
|
12
|
-
|
|
13
|
-
export interface CloneGroupInput {
|
|
14
|
-
instances: Array<{
|
|
15
|
-
filePath: string;
|
|
16
|
-
startLine: number;
|
|
17
|
-
endLine: number;
|
|
18
|
-
tokenCount?: number;
|
|
19
|
-
}>;
|
|
20
|
-
}
|
|
21
|
-
|
|
22
|
-
export function computeDuplicationStats(
|
|
23
|
-
groups: CloneGroupInput[],
|
|
24
|
-
allFilePaths: string[],
|
|
25
|
-
totalLines: number,
|
|
26
|
-
totalTokens: number,
|
|
27
|
-
): DuplicationStats {
|
|
28
|
-
// Per-file deduplicated line sets to avoid double-counting
|
|
29
|
-
const fileLines = new Map<string, Set<number>>();
|
|
30
|
-
let cloneInstances = 0;
|
|
31
|
-
|
|
32
|
-
for (const group of groups) {
|
|
33
|
-
for (const inst of group.instances) {
|
|
34
|
-
cloneInstances++;
|
|
35
|
-
if (!fileLines.has(inst.filePath)) fileLines.set(inst.filePath, new Set());
|
|
36
|
-
const set = fileLines.get(inst.filePath)!;
|
|
37
|
-
for (let l = inst.startLine; l <= inst.endLine; l++) set.add(l);
|
|
38
|
-
}
|
|
39
|
-
}
|
|
40
|
-
|
|
41
|
-
const filesWithClones = fileLines.size;
|
|
42
|
-
// Single-pass line count — avoids spread allocation over all file Sets
|
|
43
|
-
let duplicatedLines = 0;
|
|
44
|
-
for (const set of fileLines.values()) duplicatedLines += set.size;
|
|
45
|
-
// Single-pass token sum — avoids nested reduce and intermediate arrays
|
|
46
|
-
let rawTokens = 0;
|
|
47
|
-
for (const group of groups) {
|
|
48
|
-
for (const inst of group.instances) rawTokens += inst.tokenCount ?? 0;
|
|
49
|
-
}
|
|
50
|
-
const duplicatedTokens = Math.min(totalTokens, rawTokens);
|
|
51
|
-
|
|
52
|
-
return {
|
|
53
|
-
totalFiles: allFilePaths.length,
|
|
54
|
-
filesWithClones,
|
|
55
|
-
totalLines,
|
|
56
|
-
duplicatedLines,
|
|
57
|
-
totalTokens,
|
|
58
|
-
duplicatedTokens,
|
|
59
|
-
cloneGroups: groups.length,
|
|
60
|
-
cloneInstances,
|
|
61
|
-
duplicationPct: totalLines > 0 ? (duplicatedLines / totalLines) * 100 : 0,
|
|
62
|
-
};
|
|
63
|
-
}
|
|
64
|
-
|
|
65
|
-
export function formatDuplicationStats(stats: DuplicationStats): string {
|
|
66
|
-
const pct = stats.duplicationPct;
|
|
67
|
-
const grade = pct < 5 ? 'A' : pct < 10 ? 'B' : pct < 20 ? 'C' : pct < 30 ? 'D' : 'F';
|
|
68
|
-
const tokenPct = stats.totalTokens > 0
|
|
69
|
-
? ((stats.duplicatedTokens / stats.totalTokens) * 100).toFixed(1)
|
|
70
|
-
: '0.0';
|
|
71
|
-
return [
|
|
72
|
-
`Duplication grade: ${grade} (${pct.toFixed(1)}% duplicated lines)`,
|
|
73
|
-
`Clone groups: ${stats.cloneGroups}`,
|
|
74
|
-
`Clone instances: ${stats.cloneInstances}`,
|
|
75
|
-
`Files with clones: ${stats.filesWithClones} / ${stats.totalFiles}`,
|
|
76
|
-
`Duplicated lines: ${stats.duplicatedLines} / ${stats.totalLines} (${pct.toFixed(1)}%)`,
|
|
77
|
-
`Duplicated tokens: ${stats.duplicatedTokens} / ${stats.totalTokens} (${tokenPct}%)`,
|
|
78
|
-
].join('\n');
|
|
79
|
-
}
|
package/src/graph/edge-filter.ts
DELETED
|
@@ -1,117 +0,0 @@
|
|
|
1
|
-
import type { MonographEdge, EdgeRelation, EdgeConfidence } from '../types.js';
|
|
2
|
-
import type { MonographDb } from '../storage/db.js';
|
|
3
|
-
|
|
4
|
-
// ── Filter options ─────────────────────────────────────────────────────────────
|
|
5
|
-
|
|
6
|
-
export interface EdgeFilterOptions {
|
|
7
|
-
/** Only return edges whose relation matches one of these values. */
|
|
8
|
-
relations?: EdgeRelation[];
|
|
9
|
-
/** Only return edges whose confidence label matches one of these values. */
|
|
10
|
-
confidences?: EdgeConfidence[];
|
|
11
|
-
/** Only return edges with a confidence_score >= this value (0–1). */
|
|
12
|
-
minConfidenceScore?: number;
|
|
13
|
-
/** Only return edges with a confidence_score <= this value (0–1). */
|
|
14
|
-
maxConfidenceScore?: number;
|
|
15
|
-
}
|
|
16
|
-
|
|
17
|
-
// ── DB-backed filter ───────────────────────────────────────────────────────────
|
|
18
|
-
|
|
19
|
-
/**
|
|
20
|
-
* Query edges from a MonographDb with optional relation / confidence filters.
|
|
21
|
-
* All filters are combined with AND.
|
|
22
|
-
*/
|
|
23
|
-
export function filterEdges(
|
|
24
|
-
db: MonographDb,
|
|
25
|
-
options: EdgeFilterOptions = {},
|
|
26
|
-
): MonographEdge[] {
|
|
27
|
-
const conditions: string[] = [];
|
|
28
|
-
const params: unknown[] = [];
|
|
29
|
-
|
|
30
|
-
if (options.relations && options.relations.length > 0) {
|
|
31
|
-
const ph = options.relations.map(() => '?').join(',');
|
|
32
|
-
conditions.push(`relation IN (${ph})`);
|
|
33
|
-
params.push(...options.relations);
|
|
34
|
-
}
|
|
35
|
-
|
|
36
|
-
if (options.confidences && options.confidences.length > 0) {
|
|
37
|
-
const ph = options.confidences.map(() => '?').join(',');
|
|
38
|
-
conditions.push(`confidence IN (${ph})`);
|
|
39
|
-
params.push(...options.confidences);
|
|
40
|
-
}
|
|
41
|
-
|
|
42
|
-
if (options.minConfidenceScore !== undefined) {
|
|
43
|
-
conditions.push('confidence_score >= ?');
|
|
44
|
-
params.push(options.minConfidenceScore);
|
|
45
|
-
}
|
|
46
|
-
|
|
47
|
-
if (options.maxConfidenceScore !== undefined) {
|
|
48
|
-
conditions.push('confidence_score <= ?');
|
|
49
|
-
params.push(options.maxConfidenceScore);
|
|
50
|
-
}
|
|
51
|
-
|
|
52
|
-
const where = conditions.length > 0 ? `WHERE ${conditions.join(' AND ')}` : '';
|
|
53
|
-
const sql = `SELECT id, source_id, target_id, relation, confidence, confidence_score, reason, evidence
|
|
54
|
-
FROM edges ${where}`;
|
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55
|
-
|
|
56
|
-
const rows = db.prepare(sql).all(...params) as {
|
|
57
|
-
id: string;
|
|
58
|
-
source_id: string;
|
|
59
|
-
target_id: string;
|
|
60
|
-
relation: string;
|
|
61
|
-
confidence: string;
|
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62
|
-
confidence_score: number;
|
|
63
|
-
reason: string | null;
|
|
64
|
-
evidence: string | null;
|
|
65
|
-
}[];
|
|
66
|
-
|
|
67
|
-
return rows.map(r => ({
|
|
68
|
-
id: r.id,
|
|
69
|
-
sourceId: r.source_id,
|
|
70
|
-
targetId: r.target_id,
|
|
71
|
-
relation: r.relation as EdgeRelation,
|
|
72
|
-
confidence: r.confidence as EdgeConfidence,
|
|
73
|
-
confidenceScore: r.confidence_score,
|
|
74
|
-
reason: r.reason ?? undefined,
|
|
75
|
-
}));
|
|
76
|
-
}
|
|
77
|
-
|
|
78
|
-
// ── In-memory filter ───────────────────────────────────────────────────────────
|
|
79
|
-
|
|
80
|
-
/**
|
|
81
|
-
* Filter an already-loaded array of edges in memory.
|
|
82
|
-
* Useful when the caller already has edges and does not need a DB round-trip.
|
|
83
|
-
*/
|
|
84
|
-
export function filterEdgesInMemory(
|
|
85
|
-
edges: MonographEdge[],
|
|
86
|
-
options: EdgeFilterOptions = {},
|
|
87
|
-
): MonographEdge[] {
|
|
88
|
-
// Convert arrays to Sets once before the loop for O(1) membership checks
|
|
89
|
-
const relationSet = options.relations && options.relations.length > 0
|
|
90
|
-
? new Set(options.relations) : null;
|
|
91
|
-
const confidenceSet = options.confidences && options.confidences.length > 0
|
|
92
|
-
? new Set(options.confidences) : null;
|
|
93
|
-
const minScore = options.minConfidenceScore;
|
|
94
|
-
const maxScore = options.maxConfidenceScore;
|
|
95
|
-
|
|
96
|
-
return edges.filter(e => {
|
|
97
|
-
if (relationSet && !relationSet.has(e.relation)) return false;
|
|
98
|
-
if (confidenceSet && !confidenceSet.has(e.confidence)) return false;
|
|
99
|
-
if (minScore !== undefined && e.confidenceScore < minScore) return false;
|
|
100
|
-
if (maxScore !== undefined && e.confidenceScore > maxScore) return false;
|
|
101
|
-
return true;
|
|
102
|
-
});
|
|
103
|
-
}
|
|
104
|
-
|
|
105
|
-
// ── Formatting ─────────────────────────────────────────────────────────────────
|
|
106
|
-
|
|
107
|
-
/** Format a list of filtered edges as structured text for LLM consumption. */
|
|
108
|
-
export function formatFilteredEdges(edges: MonographEdge[]): string {
|
|
109
|
-
if (edges.length === 0) return 'No edges match the filter.';
|
|
110
|
-
const lines: string[] = [`Filtered edges (${edges.length}):`];
|
|
111
|
-
for (const e of edges) {
|
|
112
|
-
const score = e.confidenceScore !== undefined ? ` [${e.confidenceScore.toFixed(2)}]` : '';
|
|
113
|
-
const reason = e.reason ? ` — ${e.reason}` : '';
|
|
114
|
-
lines.push(` ${e.sourceId} -[${e.relation}/${e.confidence}${score}]-> ${e.targetId}${reason}`);
|
|
115
|
-
}
|
|
116
|
-
return lines.join('\n');
|
|
117
|
-
}
|
package/src/graph/explain.ts
DELETED
|
@@ -1,133 +0,0 @@
|
|
|
1
|
-
export interface RuleDef {
|
|
2
|
-
id: string; // e.g. 'god-node', 'unreachable-file', 'circular-deps'
|
|
3
|
-
name?: string; // human readable
|
|
4
|
-
title?: string; // display title (alias for name)
|
|
5
|
-
description: string; // what it detects
|
|
6
|
-
rationale?: string; // why it matters
|
|
7
|
-
remediation?: string; // how to fix
|
|
8
|
-
severity?: 'error' | 'warning' | 'info';
|
|
9
|
-
docsUrl?: string;
|
|
10
|
-
docs?: string; // alias for docsUrl
|
|
11
|
-
}
|
|
12
|
-
|
|
13
|
-
export const CHECK_RULES: RuleDef[] = [
|
|
14
|
-
{
|
|
15
|
-
id: 'god-node',
|
|
16
|
-
name: 'God Node',
|
|
17
|
-
description: 'A file or class with too many incoming dependencies (high fan-in).',
|
|
18
|
-
rationale: 'God nodes create fragile coupling — any change ripples across many files.',
|
|
19
|
-
remediation: 'Split into smaller, focused modules. Extract shared logic into utility files.',
|
|
20
|
-
severity: 'warning',
|
|
21
|
-
},
|
|
22
|
-
{
|
|
23
|
-
id: 'unreachable-file',
|
|
24
|
-
name: 'Unreachable File',
|
|
25
|
-
description: 'A file that cannot be reached from any runtime or test entry point.',
|
|
26
|
-
rationale: 'Unreachable files are dead code — they increase build size and maintenance burden.',
|
|
27
|
-
remediation: 'Delete or connect the file to a live import chain. Check if it was accidentally disconnected.',
|
|
28
|
-
severity: 'warning',
|
|
29
|
-
},
|
|
30
|
-
{
|
|
31
|
-
id: 'circular-deps',
|
|
32
|
-
name: 'Circular Dependencies',
|
|
33
|
-
description: 'Files that form an import cycle.',
|
|
34
|
-
rationale: 'Circular imports complicate initialization order, testing, and refactoring.',
|
|
35
|
-
remediation: 'Extract shared types/utilities to a new file that neither participant imports from.',
|
|
36
|
-
severity: 'error',
|
|
37
|
-
},
|
|
38
|
-
{
|
|
39
|
-
id: 'high-coupling',
|
|
40
|
-
name: 'High Coupling Concentration',
|
|
41
|
-
description: 'A disproportionate share of imports targeting a small number of files.',
|
|
42
|
-
rationale: 'Over-coupled files become change bottlenecks — every feature touches them.',
|
|
43
|
-
remediation: 'Break up the central file using the facade pattern or dependency inversion.',
|
|
44
|
-
severity: 'warning',
|
|
45
|
-
},
|
|
46
|
-
{
|
|
47
|
-
id: 'isolated-node',
|
|
48
|
-
name: 'Isolated Node',
|
|
49
|
-
description: 'A file with no imports and no importers.',
|
|
50
|
-
rationale: 'Isolated files have no connection to the codebase — likely dead or forgotten.',
|
|
51
|
-
remediation: 'Either connect it to the dependency graph or delete it.',
|
|
52
|
-
severity: 'info',
|
|
53
|
-
},
|
|
54
|
-
{
|
|
55
|
-
id: 'boundary-violation',
|
|
56
|
-
name: 'Boundary Zone Violation',
|
|
57
|
-
description: 'An import that crosses a forbidden architectural boundary.',
|
|
58
|
-
rationale: 'Boundary violations break layer isolation and make the architecture drift over time.',
|
|
59
|
-
remediation: 'Introduce an anti-corruption layer or move the logic to the correct zone.',
|
|
60
|
-
severity: 'error',
|
|
61
|
-
},
|
|
62
|
-
{
|
|
63
|
-
id: 'low-cohesion',
|
|
64
|
-
name: 'Low Community Cohesion',
|
|
65
|
-
description: 'A module community with a low ratio of internal to possible edges.',
|
|
66
|
-
rationale: 'Low cohesion means the community is an arbitrary grouping, not a real module.',
|
|
67
|
-
remediation: 'Re-organize files so that related functionality is co-located.',
|
|
68
|
-
severity: 'info',
|
|
69
|
-
},
|
|
70
|
-
];
|
|
71
|
-
|
|
72
|
-
export function explainRule(ruleId: string): RuleDef | undefined {
|
|
73
|
-
return CHECK_RULES.find(r => r.id === ruleId);
|
|
74
|
-
}
|
|
75
|
-
|
|
76
|
-
export function listRules(): RuleDef[] {
|
|
77
|
-
return CHECK_RULES;
|
|
78
|
-
}
|
|
79
|
-
|
|
80
|
-
export function getRulesByFinding(findingTitle: string): RuleDef[] {
|
|
81
|
-
const lower = findingTitle.toLowerCase();
|
|
82
|
-
return CHECK_RULES.filter(r => lower.includes(r.id) || (r.name && lower.includes(r.name.toLowerCase())));
|
|
83
|
-
}
|
|
84
|
-
|
|
85
|
-
// ── Round 10: health + duplication rule catalogs ──────────────────────────────
|
|
86
|
-
|
|
87
|
-
export interface RuleGuide {
|
|
88
|
-
rule: string;
|
|
89
|
-
checklist: string[];
|
|
90
|
-
relatedRules: string[];
|
|
91
|
-
antiPatterns: string[];
|
|
92
|
-
examples: string[];
|
|
93
|
-
}
|
|
94
|
-
|
|
95
|
-
export const HEALTH_RULES: RuleDef[] = [
|
|
96
|
-
{ id: 'health/cyclomatic', title: 'High Cyclomatic Complexity', description: 'Function has too many independent execution paths', docs: 'https://en.wikipedia.org/wiki/Cyclomatic_complexity' },
|
|
97
|
-
{ id: 'health/cognitive', title: 'High Cognitive Complexity', description: 'Function is hard to understand for human readers', docs: 'https://www.sonarsource.com/docs/CognitiveComplexity.pdf' },
|
|
98
|
-
{ id: 'health/crap', title: 'High CRAP Score', description: 'Function has high complexity and low test coverage', docs: '' },
|
|
99
|
-
{ id: 'health/maintainability', title: 'Low Maintainability Index', description: 'File has a low maintainability index score', docs: '' },
|
|
100
|
-
{ id: 'health/large-function', title: 'Large Function', description: 'Function exceeds the maximum allowed lines of code', docs: '' },
|
|
101
|
-
];
|
|
102
|
-
|
|
103
|
-
export const DUPES_RULES: RuleDef[] = [
|
|
104
|
-
{ id: 'duplication/clone', title: 'Code Duplication', description: 'Code block is duplicated across multiple files', docs: '' },
|
|
105
|
-
];
|
|
106
|
-
|
|
107
|
-
export function getRuleGuide(ruleId: string): RuleGuide | null {
|
|
108
|
-
const guides: Record<string, RuleGuide> = {
|
|
109
|
-
'health/cyclomatic': {
|
|
110
|
-
rule: 'health/cyclomatic',
|
|
111
|
-
checklist: ['Extract complex conditionals into named predicates', 'Split large functions into smaller helpers', 'Use early returns to reduce nesting'],
|
|
112
|
-
relatedRules: ['health/cognitive', 'health/crap'],
|
|
113
|
-
antiPatterns: ['Deeply nested if/else chains', 'Long switch statements without extraction'],
|
|
114
|
-
examples: ['Extract `isEligible()` from a 15-branch function'],
|
|
115
|
-
},
|
|
116
|
-
'health/crap': {
|
|
117
|
-
rule: 'health/crap',
|
|
118
|
-
checklist: ['Add tests to increase coverage', 'Refactor to reduce cyclomatic complexity', 'Break into smaller testable units'],
|
|
119
|
-
relatedRules: ['health/cyclomatic', 'health/cognitive'],
|
|
120
|
-
antiPatterns: ['Complex functions with zero test coverage'],
|
|
121
|
-
examples: [],
|
|
122
|
-
},
|
|
123
|
-
};
|
|
124
|
-
return guides[ruleId] ?? null;
|
|
125
|
-
}
|
|
126
|
-
|
|
127
|
-
export function healthMeta(): Record<string, unknown> {
|
|
128
|
-
return { version: 1, rules: HEALTH_RULES.map(r => ({ id: r.id, title: r.title, description: r.description })) };
|
|
129
|
-
}
|
|
130
|
-
|
|
131
|
-
export function dupesMeta(): Record<string, unknown> {
|
|
132
|
-
return { version: 1, rules: DUPES_RULES.map(r => ({ id: r.id, title: r.title, description: r.description })) };
|
|
133
|
-
}
|