npm - @monoes/monograph - Versions diffs - 1.5.3 → 1.5.4 - Mend

@monoes/monograph 1.5.3 → 1.5.4

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Files changed (500) hide show

package/.monodesign/hook.cache.json +1 -1
package/__tests__/integration/call-attribution.test.ts +116 -0
package/coverage/base.css +224 -0
package/coverage/block-navigation.js +87 -0
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package/coverage/src/analysis/changed-workspaces.ts.html +367 -0
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package/coverage/src/analysis/churn-trend.ts.html +256 -0
package/coverage/src/analysis/churn.ts.html +874 -0
package/coverage/src/analysis/cluster-quality.ts.html +511 -0
package/coverage/src/analysis/combined.ts.html +208 -0
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+<span class="cline-any cline-neutral">&nbsp;</span></td><td class="text"><pre class="prettyprint lang-js">import louvain from 'graphology-communities-louvain';
+import { leiden } from './leiden.js';
+import type { PipelinePhase, PipelineContext } from '../types.js';
+import type { MonographEdge } from '../../types.js';
+import { loadGraphFromEdges } from '../../graph/loader.js';
+import type { CrossFileOutput } from './cross-file.js';
+import type { ParseOutput } from './parse.js';
+&nbsp;
+export interface CommunitiesOutput {
+  memberships: Map&lt;string, number&gt;;
+  communityLabels: Map&lt;number, string&gt;;
+  cohesionScores: Map&lt;number, number&gt;;
+}
+&nbsp;
+export function computeCohesion(
+  communityId: number,
+  memberships: Map&lt;string, number&gt;,
+  edges: Array&lt;{ sourceId: string; targetId: string }&gt;,
+): number {
+  const members = [...memberships.entries()].filter(([, c]) =&gt; c === communityId).map(([id]) =&gt; id);
+  const n = members.length;
+  if (n &lt;= 1) return 1;
+&nbsp;
+  const memberSet = new Set(members);
+  const maxEdges = (n * (n - 1)) / 2; // undirected: n*(n-1)/2
+  <span class="missing-if-branch" title="if path not taken" >I</span>if (maxEdges === 0) <span class="cstat-no" title="statement not covered" >return 1;</span>
+&nbsp;
+  // Count unique undirected internal edges
+  const seen = new Set&lt;string&gt;();
+  let internalCount = 0;
+  for (const e of edges) {
+    if (memberSet.has(e.sourceId) &amp;&amp; memberSet.has(e.targetId)) {
+      const key = [e.sourceId, e.targetId].sort().join('\0');
+      <span class="missing-if-branch" title="else path not taken" >E</span>if (!seen.has(key)) {
+        seen.add(key);
+        internalCount++;
+      }
+    }
+  }
+  return internalCount / maxEdges;
+}
+&nbsp;
+/**
+ * Compute cohesion scores for all communities in a single O(N+E) pass.
+ *
+ * This replaces calling `computeCohesion` inside a loop, which was O(K*(N+E))
+ * because each call re-scanned all memberships (O(N)) and all edges (O(E)).
+ *
+ * @param memberships - nodeId → communityId map from the clustering step
+ * @param edges - all edges used for the graph (IMPORTS + resolved)
+ * @returns Map of communityId → cohesion score ∈ [0, 1]
+ */
+export function computeAllCohesionScores(
+  memberships: Map&lt;string, number&gt;,
+  edges: Array&lt;{ sourceId: string; targetId: string }&gt;,
+): Map&lt;number, number&gt; {
+  // Single pass over memberships: build communityId → Set&lt;nodeId&gt;
+  const memberSets = new Map&lt;number, Set&lt;string&gt;&gt;();
+  for (const [nodeId, commId] of memberships) {
+    let s = memberSets.get(commId);
+    if (!s) {
+      s = new Set();
+      memberSets.set(commId, s);
+    }
+    s.add(nodeId);
+  }
+&nbsp;
+  // Single pass over edges: count unique undirected internal edges per community
+  const internalEdgeCounts = new Map&lt;number, number&gt;();
+  const seenEdgeKeys = new Map&lt;number, Set&lt;string&gt;&gt;();
+&nbsp;
+  for (const e of edges) {
+    const commSrc = memberships.get(e.sourceId);
+    const commTgt = memberships.get(e.targetId);
+    if (commSrc === undefined || commTgt === undefined || commSrc !== commTgt) continue;
+&nbsp;
+    let seen = seenEdgeKeys.get(commSrc);
+    if (!seen) {
+      seen = new Set();
+      seenEdgeKeys.set(commSrc, seen);
+    }
+    const key = e.sourceId &lt; e.targetId
+      ? `${e.sourceId}\0${e.targetId}`
+      : `${e.targetId}\0${e.sourceId}`;
+    if (!seen.has(key)) {
+      seen.add(key);
+      internalEdgeCounts.set(commSrc, (internalEdgeCounts.get(commSrc) ?? 0) + 1);
+    }
+  }
+&nbsp;
+  // Compute final scores
+  const scores = new Map&lt;number, number&gt;();
+  for (const [commId, members] of memberSets) {
+    const n = members.size;
+    <span class="missing-if-branch" title="if path not taken" >I</span>if (n &lt;= 1) {
+<span class="cstat-no" title="statement not covered" >      scores.set(commId, 1);</span>
+<span class="cstat-no" title="statement not covered" >      continue;</span>
+    }
+    const maxEdges = (n * (n - 1)) / 2;
+    const internalCount = internalEdgeCounts.get(commId) ?? <span class="branch-1 cbranch-no" title="branch not covered" >0;</span>
+    scores.set(commId, maxEdges &gt; 0 ? internalCount / maxEdges : <span class="branch-1 cbranch-no" title="branch not covered" >1)</span>;
+  }
+&nbsp;
+  return scores;
+}
+&nbsp;
+export const communitiesPhase: PipelinePhase&lt;CommunitiesOutput&gt; = {
+  name: 'communities',
+  deps: ['parse', 'cross-file', 'mro'],
+  async execute(ctx, deps) {
+    <span class="missing-if-branch" title="if path not taken" >I</span>if (ctx.allFilesCached) {
+<span class="cstat-no" title="statement not covered" >      return { memberships: new Map(), communityLabels: new Map(), cohesionScores: new Map() };</span>
+    }
+    const { resolvedEdges } = deps.get('cross-file') as CrossFileOutput;
+    const { allEdges } = deps.get('parse') as ParseOutput;
+    const allUsedEdges: MonographEdge[] = [...allEdges, ...resolvedEdges];
+&nbsp;
+    const graph = loadGraphFromEdges(allUsedEdges);
+    let communities: Record&lt;string, number&gt; = {};
+    try {
+      communities = leiden(graph, { seed: 42 });
+    } catch (e) {
+<span class="cstat-no" title="statement not covered" >      console.warn('[monograph] Leiden failed, falling back to Louvain:', e);</span>
+<span class="cstat-no" title="statement not covered" >      try {</span>
+<span class="cstat-no" title="statement not covered" >        communities = louvain(graph, { randomWalk: false });</span>
+      } catch {
+        // Empty or disconnected graph
+      }
+    }
+&nbsp;
+    const memberships = new Map&lt;string, number&gt;(Object.entries(communities).map(([k, v]) =&gt; [k, v]));
+    const communityLabels = new Map&lt;number, string&gt;();
+&nbsp;
+    const communityDegrees = new Map&lt;number, Map&lt;string, number&gt;&gt;();
+    for (const [nodeId, commId] of memberships) {
+      if (!communityDegrees.has(commId)) communityDegrees.set(commId, new Map());
+      const deg = graph.degree(nodeId) ?? <span class="branch-1 cbranch-no" title="branch not covered" >0;</span>
+      communityDegrees.get(commId)!.set(nodeId, deg);
+    }
+    for (const [commId, nodeDegs] of communityDegrees) {
+      const topNode = [...nodeDegs.entries()].sort((a, b) =&gt; b[1] - a[1])[0]?.[0] ?? <span class="branch-1 cbranch-no" title="branch not covered" >'';</span>
+      communityLabels.set(commId, `community-${commId}(${topNode.slice(0, 20)})`);
+    }
+&nbsp;
+    // Compute all cohesion scores in one O(N+E) pass instead of O(K*(N+E))
+    const cohesionScores = computeAllCohesionScores(memberships, allUsedEdges);
+&nbsp;
+    // Persist community assignments to the DB
+    if (memberships.size &gt; 0) {
+      const commSizes = new Map&lt;number, number&gt;();
+      for (const commId of memberships.values()) {
+        commSizes.set(commId, (commSizes.get(commId) ?? 0) + 1);
+      }
+      const updateNode = ctx.db.prepare('UPDATE nodes SET community_id = ? WHERE id = ?');
+      const upsertComm = ctx.db.prepare(
+        'INSERT OR REPLACE INTO communities (id, label, size, cohesion_score) VALUES (?, ?, ?, ?)',
+      );
+      ctx.db.transaction(() =&gt; {
+        for (const [nodeId, commId] of memberships) {
+          updateNode.run(commId, nodeId);
+        }
+        for (const [commId, label] of communityLabels) {
+          upsertComm.run(commId, label, commSizes.get(commId) ?? <span class="branch-1 cbranch-no" title="branch not covered" >0, c</span>ohesionScores.get(commId) ?? <span class="branch-1 cbranch-no" title="branch not covered" >0)</span>;
+        }
+      })();
+    }
+&nbsp;
+    return { memberships, communityLabels, cohesionScores };
+  },
+};
+&nbsp;
+/**
+ * Split a community that is too large into smaller sub-groups.
+ * By graphify convention, communities &gt;25% of total graph nodes are split.
+ */
+export function splitOversizedCommunity(memberIds: string[], maxGroupSize: number): string[][] {
+  if (memberIds.length &lt;= maxGroupSize) return [memberIds];
+  const groups: string[][] = [];
+  for (let i = 0; i &lt; memberIds.length; i += maxGroupSize) {
+    groups.push(memberIds.slice(i, i + maxGroupSize));
+  }
+  return groups;
+}
+&nbsp;</pre></td></tr></table></pre>
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+                at 2026-07-25T08:38:16.548Z
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