npm - @jbrowse/plugin-wiggle - Versions diffs - 2.2.1 → 2.3.0 - Mend

@jbrowse/plugin-wiggle 2.2.1 → 2.3.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Files changed (109) hide show

package/esm/LinearWiggleDisplay/components/SetColorDialog.js.map CHANGED Viewed

	@@ -1 +1 @@
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1	+ {"version":3,"file":"SetColorDialog.js","sourceRoot":"","sources":["../../../src/LinearWiggleDisplay/components/SetColorDialog.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,QAAQ,EAAE,MAAM,OAAO,CAAA;AACvC,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AACrC,OAAO,EACL,MAAM,EACN,aAAa,EACb,aAAa,EACb,gBAAgB,EAChB,KAAK,EACL,UAAU,GACX,MAAM,eAAe,CAAA;AACtB,OAAO,EAAE,MAAM,EAAE,MAAM,kBAAkB,CAAA;AACzC,OAAO,EAAE,WAAW,EAAE,MAAM,8BAA8B,CAAA;AAE1D,SAAS,cAAc,CAAC,EACtB,KAAK,EACL,WAAW,GAWZ;IACC,MAAM,CAAC,MAAM,EAAE,SAAS,CAAC,GAAG,QAAQ,CAAC,KAAK,CAAC,CAAA;IAE3C,OAAO,CACL,oBAAC,MAAM,IAAC,IAAI,QAAC,OAAO,EAAE,WAAW,EAAE,KAAK,EAAC,WAAW;QAClD,oBAAC,aAAa;YACZ,oBAAC,UAAU,wJAIE;YACb,oBAAC,gBAAgB,IACf,OAAO,EAAE,CAAC,MAAM,EAChB,OAAO,EAAE,GAAG,EAAE,CAAC,SAAS,CAAC,KAAK,CAAC,EAC/B,OAAO,EAAE,oBAAC,KAAK,OAAG,EAClB,KAAK,EAAE,eAAe,GACtB;YACF,oBAAC,gBAAgB,IACf,OAAO,EAAE,MAAM,EACf,OAAO,EAAE,GAAG,EAAE,CAAC,SAAS,CAAC,IAAI,CAAC,EAC9B,OAAO,EAAE,oBAAC,KAAK,OAAG,EAClB,KAAK,EAAE,yBAAyB,GAChC;YAED,MAAM,CAAC,CAAC,CAAC,CACR;gBACE,oBAAC,UAAU,yBAA4B;gBACvC,oBAAC,WAAW,IACV,KAAK,EAAE,KAAK,CAAC,QAAQ,IAAI,OAAO,EAChC,QAAQ,EAAE,KAAK,CAAC,EAAE;wBAChB,KAAK,CAAC,WAAW,CAAC,KAAK,CAAC,CAAA;wBACxB,KAAK,CAAC,QAAQ,CAAC,SAAS,CAAC,CAAA;oBAC3B,CAAC,GACD;gBACF,oBAAC,UAAU,yBAA4B;gBAEvC,oBAAC,WAAW,IACV,KAAK,EAAE,KAAK,CAAC,QAAQ,IAAI,OAAO,EAChC,QAAQ,EAAE,KAAK,CAAC,EAAE;wBAChB,KAAK,CAAC,WAAW,CAAC,KAAK,CAAC,CAAA;wBACxB,KAAK,CAAC,QAAQ,CAAC,SAAS,CAAC,CAAA;oBAC3B,CAAC,GACD,CACD,CACJ,CAAC,CAAC,CAAC,CACF;gBACE,oBAAC,UAAU,wBAA2B;gBACtC,oBAAC,WAAW,IACV,KAAK,EAAE,KAAK,CAAC,KAAK,IAAI,OAAO,EAC7B,QAAQ,EAAE,KAAK,CAAC,EAAE,CAAC,KAAK,CAAC,QAAQ,CAAC,KAAK,CAAC,GACxC,CACD,CACJ,CACa;QAChB,oBAAC,aAAa;YACZ,oBAAC,MAAM,IACL,OAAO,EAAE,GAAG,EAAE;oBACZ,KAAK,CAAC,WAAW,CAAC,SAAS,CAAC,CAAA;oBAC5B,KAAK,CAAC,WAAW,CAAC,SAAS,CAAC,CAAA;oBAC5B,KAAK,CAAC,QAAQ,CAAC,SAAS,CAAC,CAAA;gBAC3B,CAAC,EACD,KAAK,EAAC,WAAW,EACjB,OAAO,EAAC,WAAW,sBAGZ;YAET,oBAAC,MAAM,IACL,OAAO,EAAC,WAAW,EACnB,KAAK,EAAC,SAAS,EACf,IAAI,EAAC,QAAQ,EACb,OAAO,EAAE,GAAG,EAAE,CAAC,WAAW,EAAE,aAGrB,CACK,CACT,CACV,CAAA;AACH,CAAC;AAED,eAAe,QAAQ,CAAC,cAAc,CAAC,CAAA"}

package/esm/LinearWiggleDisplay/components/WiggleDisplayComponent.js CHANGED Viewed

@@ -1,8 +1,8 @@
 import React from 'react';
+import { observer } from 'mobx-react';
 import { measureText, getContainingView, getContainingTrack, } from '@jbrowse/core/util';
 import { getConf } from '@jbrowse/core/configuration';
 import { BaseLinearDisplayComponent, } from '@jbrowse/plugin-linear-genome-view';
-import { observer } from 'mobx-react';
 import YScaleBar from './YScaleBar';
 const LinearWiggleDisplay = observer((props) => {
     const { model } = props;

package/esm/LinearWiggleDisplay/components/WiggleDisplayComponent.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- {"version":3,"file":"WiggleDisplayComponent.js","sourceRoot":"","sources":["../../../src/LinearWiggleDisplay/components/WiggleDisplayComponent.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,MAAM,OAAO,CAAA;AACzB,OAAO,EACL,WAAW,EACX,iBAAiB,EACjB,kBAAkB,GACnB,MAAM,oBAAoB,CAAA;AAC3B,OAAO,EAAE,OAAO,EAAE,MAAM,6BAA6B,CAAA;AACrD,OAAO,EACL,0BAA0B,GAE3B,MAAM,oCAAoC,CAAA;~~AAC3C~~,OAAO,~~EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AAErC,OAAO,~~SAAS,MAAM,aAAa,CAAA;AAInC,MAAM,mBAAmB,GAAG,QAAQ,CAAC,CAAC,KAAoC,EAAE,EAAE;IAC5E,MAAM,EAAE,KAAK,EAAE,GAAG,KAAK,CAAA;IACvB,MAAM,EAAE,KAAK,EAAE,MAAM,EAAE,aAAa,EAAE,GAAG,KAAK,CAAA;IAE9C,MAAM,EAAE,WAAW,EAAE,GAAG,iBAAiB,CAAC,KAAK,CAAQ,CAAA;IACvD,MAAM,KAAK,GAAG,kBAAkB,CAAC,KAAK,CAAC,CAAA;IACvC,MAAM,IAAI,GACR,WAAW,KAAK,aAAa;QAC3B,CAAC,CAAC,WAAW,CAAC,OAAO,CAAC,KAAK,EAAE,MAAM,CAAC,EAAE,IAAI,CAAC,GAAG,GAAG;QACjD,CAAC,CAAC,EAAE,CAAA;IACR,OAAO,CACL;QACE,oBAAC,0BAA0B,OAAK,KAAK,GAAI;QACxC,KAAK,IAAI,aAAa,CAAC,CAAC,CAAC,CACxB,6BACE,KAAK,EAAE;gBACL,QAAQ,EAAE,UAAU;gBACpB,GAAG,EAAE,CAAC;gBACN,IAAI;gBACJ,aAAa,EAAE,MAAM;gBACrB,MAAM;gBACN,KAAK,EAAE,EAAE;aACV;YAED,oBAAC,SAAS,IAAC,KAAK,EAAE,KAAK,GAAI,CACvB,CACP,CAAC,CAAC,CAAC,IAAI,CACJ,CACP,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,eAAe,mBAAmB,CAAA;AAElC,OAAO,EAAE,SAAS,EAAE,CAAA"}
1	+ {"version":3,"file":"WiggleDisplayComponent.js","sourceRoot":"","sources":["../../../src/LinearWiggleDisplay/components/WiggleDisplayComponent.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,MAAM,OAAO,CAAA;AACzB,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AACrC,OAAO,EACL,WAAW,EACX,iBAAiB,EACjB,kBAAkB,GACnB,MAAM,oBAAoB,CAAA;AAC3B,OAAO,EAAE,OAAO,EAAE,MAAM,6BAA6B,CAAA;AACrD,OAAO,EACL,0BAA0B,GAE3B,MAAM,oCAAoC,CAAA;AAI3C,OAAO,SAAS,MAAM,aAAa,CAAA;AAInC,MAAM,mBAAmB,GAAG,QAAQ,CAAC,CAAC,KAAoC,EAAE,EAAE;IAC5E,MAAM,EAAE,KAAK,EAAE,GAAG,KAAK,CAAA;IACvB,MAAM,EAAE,KAAK,EAAE,MAAM,EAAE,aAAa,EAAE,GAAG,KAAK,CAAA;IAE9C,MAAM,EAAE,WAAW,EAAE,GAAG,iBAAiB,CAAC,KAAK,CAAQ,CAAA;IACvD,MAAM,KAAK,GAAG,kBAAkB,CAAC,KAAK,CAAC,CAAA;IACvC,MAAM,IAAI,GACR,WAAW,KAAK,aAAa;QAC3B,CAAC,CAAC,WAAW,CAAC,OAAO,CAAC,KAAK,EAAE,MAAM,CAAC,EAAE,IAAI,CAAC,GAAG,GAAG;QACjD,CAAC,CAAC,EAAE,CAAA;IACR,OAAO,CACL;QACE,oBAAC,0BAA0B,OAAK,KAAK,GAAI;QACxC,KAAK,IAAI,aAAa,CAAC,CAAC,CAAC,CACxB,6BACE,KAAK,EAAE;gBACL,QAAQ,EAAE,UAAU;gBACpB,GAAG,EAAE,CAAC;gBACN,IAAI;gBACJ,aAAa,EAAE,MAAM;gBACrB,MAAM;gBACN,KAAK,EAAE,EAAE;aACV;YAED,oBAAC,SAAS,IAAC,KAAK,EAAE,KAAK,GAAI,CACvB,CACP,CAAC,CAAC,CAAC,IAAI,CACJ,CACP,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,eAAe,mBAAmB,CAAA;AAElC,OAAO,EAAE,SAAS,EAAE,CAAA"}

package/esm/LinearWiggleDisplay/index.js CHANGED Viewed

@@ -9,6 +9,7 @@ export default (pluginManager) => {
         const stateModel = modelFactory(pluginManager, configSchema);
         return new DisplayType({
             name: 'LinearWiggleDisplay',
+            displayName: 'Wiggle display',
             configSchema,
             stateModel,
             trackType: 'QuantitativeTrack',

package/esm/LinearWiggleDisplay/index.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- {"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/LinearWiggleDisplay/index.ts"],"names":[],"mappings":"AACA,OAAO,WAAW,MAAM,iDAAiD,CAAA;AAEzE,OAAO,mBAAmB,MAAM,uBAAuB,CAAA;AACvD,OAAO,YAAY,MAAM,gBAAgB,CAAA;AACzC,OAAO,cAAc,MAAM,qCAAqC,CAAA;AAChE,OAAO,OAAO,MAAM,sBAAsB,CAAA;AAE1C,eAAe,CAAC,aAA4B,EAAE,EAAE;IAC9C,aAAa,CAAC,cAAc,CAAC,GAAG,EAAE;QAChC,MAAM,YAAY,GAAG,mBAAmB,CAAC,aAAa,CAAC,CAAA;QACvD,MAAM,UAAU,GAAG,YAAY,CAAC,aAAa,EAAE,YAAY,CAAC,CAAA;QAC5D,OAAO,IAAI,WAAW,CAAC;YACrB,IAAI,EAAE,qBAAqB;YAC3B,YAAY;YACZ,UAAU;YACV,SAAS,EAAE,mBAAmB;YAC9B,QAAQ,EAAE,kBAAkB;YAC5B,cAAc;SACf,CAAC,CAAA;IACJ,CAAC,CAAC,CAAA;AACJ,CAAC,CAAA;AAED,OAAO,EAAE,cAAc,EAAE,YAAY,EAAE,OAAO,EAAE,CAAA"}
1	+ {"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/LinearWiggleDisplay/index.ts"],"names":[],"mappings":"AACA,OAAO,WAAW,MAAM,iDAAiD,CAAA;AAEzE,OAAO,mBAAmB,MAAM,uBAAuB,CAAA;AACvD,OAAO,YAAY,MAAM,gBAAgB,CAAA;AACzC,OAAO,cAAc,MAAM,qCAAqC,CAAA;AAChE,OAAO,OAAO,MAAM,sBAAsB,CAAA;AAE1C,eAAe,CAAC,aAA4B,EAAE,EAAE;IAC9C,aAAa,CAAC,cAAc,CAAC,GAAG,EAAE;QAChC,MAAM,YAAY,GAAG,mBAAmB,CAAC,aAAa,CAAC,CAAA;QACvD,MAAM,UAAU,GAAG,YAAY,CAAC,aAAa,EAAE,YAAY,CAAC,CAAA;QAC5D,OAAO,IAAI,WAAW,CAAC;YACrB,IAAI,EAAE,qBAAqB;YAC3B,WAAW,EAAE,gBAAgB;YAC7B,YAAY;YACZ,UAAU;YACV,SAAS,EAAE,mBAAmB;YAC9B,QAAQ,EAAE,kBAAkB;YAC5B,cAAc;SACf,CAAC,CAAA;IACJ,CAAC,CAAC,CAAA;AACJ,CAAC,CAAA;AAED,OAAO,EAAE,cAAc,EAAE,YAAY,EAAE,OAAO,EAAE,CAAA"}

package/esm/LinearWiggleDisplay/models/model.d.ts CHANGED Viewed

@@ -12,7 +12,9 @@ declare function stateModelFactory(pluginManager: PluginManager, configSchema: A
     type: import("mobx-state-tree").ISimpleType<string>;
     rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
 } & {
-    height: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<number>, [undefined]>;
+    height: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<number>, [undefined]>; /**
+     * #property
+     */
     blockState: import("mobx-state-tree").IMapType<import("mobx-state-tree").IModelType<{
         key: import("mobx-state-tree").ISimpleType<string>;
         region: import("mobx-state-tree").IModelType<{
@@ -39,7 +41,9 @@ declare function stateModelFactory(pluginManager: PluginManager, configSchema: A
         status: string;
         error: unknown;
         message: string | undefined;
-        maxHeightReached: boolean;
+        maxHeightReached: boolean; /**
+         * #property
+         */
         ReactComponent: ({ model, }: {
             model: any; /**
              * #property
@@ -160,6 +164,9 @@ declare function stateModelFactory(pluginManager: PluginManager, configSchema: A
             type: string;
             rpcDriverName: string | undefined;
         } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
+            /**
+             * #property
+             */
             rendererTypeName: string;
             error: unknown;
         } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
@@ -174,23 +181,23 @@ declare function stateModelFactory(pluginManager: PluginManager, configSchema: A
     readonly adapterConfig: any;
     readonly parentTrack: any;
     renderProps(): any;
-    readonly rendererType: import("@jbrowse/core/pluggableElementTypes").RendererType;
+    readonly rendererType: import("@jbrowse/core/pluggableElementTypes").RendererType; /**
+     * #action
+     */
     readonly DisplayMessageComponent: React.FC<any> | undefined;
     trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
     readonly viewMenuActions: import("@jbrowse/core/ui").MenuItem[];
     regionCannotBeRendered(): undefined;
 } & {
-    setError(error?: unknown): void; /**
-     * #action
-     */
+    setError(error?: unknown): void;
     setRpcDriverName(rpcDriverName: string): void;
     reload(): void;
 } & {
     currBpPerPx: number;
+    scrollTop: number;
     message: string;
     featureIdUnderMouse: string | undefined;
     contextMenuFeature: Feature | undefined;
-    scrollTop: number;
     estimatedRegionStatsP: Promise<import("@jbrowse/core/data_adapters/BaseAdapter").Stats> | undefined;
     estimatedRegionStats: import("@jbrowse/core/data_adapters/BaseAdapter").Stats | undefined;
 } & {
@@ -209,11 +216,11 @@ declare function stateModelFactory(pluginManager: PluginManager, configSchema: A
     searchFeatureByID(id: string): [number, number, number, number] | undefined;
     readonly currentBytesRequested: number;
     readonly currentFeatureScreenDensity: number;
-    readonly maxFeatureScreenDensity: any; /**
+    readonly maxFeatureScreenDensity: any;
+    readonly estimatedStatsReady: boolean;
+    readonly maxAllowableBytes: number; /**
      * #getter
      */
-    readonly estimatedStatsReady: boolean;
-    readonly maxAllowableBytes: number;
 } & {
     setMessage(message: string): void;
     afterAttach(): void;
@@ -236,7 +243,9 @@ declare function stateModelFactory(pluginManager: PluginManager, configSchema: A
     clearFeatureSelection(): void;
     setFeatureIdUnderMouse(feature: string | undefined): void;
     reload(): void;
-    setContextMenuFeature(feature?: Feature | undefined): void;
+    setContextMenuFeature(feature?: Feature | undefined): void; /**
+     * #method
+     */
 } & {
     readonly regionTooLarge: boolean;
     readonly regionTooLargeReason: string;
@@ -260,12 +269,11 @@ declare function stateModelFactory(pluginManager: PluginManager, configSchema: A
         overrideHeight: number;
     }): Promise<JSX.Element>;
 } & {
-    statsReady: boolean;
     message: string | undefined;
     stats: {
         scoreMin: number;
         scoreMax: number;
-    };
+    } | undefined;
     statsFetchInProgress: AbortController | undefined;
 } & {
     /**
@@ -397,7 +405,7 @@ declare function stateModelFactory(pluginManager: PluginManager, configSchema: A
     /**
      * #getter
      */
-    readonly domain: number[];
+    readonly domain: number[] | undefined;
     /**
      * #getter
      */
@@ -406,11 +414,11 @@ declare function stateModelFactory(pluginManager: PluginManager, configSchema: A
      * #getter
      */
     readonly scaleOpts: {
-        domain: number[];
+        domain: number[] | undefined;
         stats: {
             scoreMin: number;
             scoreMax: number;
-        };
+        } | undefined;
         autoscaleType: any;
         scaleType: any;
         inverted: any;
@@ -436,7 +444,7 @@ declare function stateModelFactory(pluginManager: PluginManager, configSchema: A
         values: number[];
         format: (d: import("d3-scale").NumberValue) => string;
         position: import("d3-scale").ScaleLinear<number, number, never> | import("d3-scale").ScaleQuantize<number, never>;
-    };
+    } | undefined;
     /**
      * #getter
      */

package/esm/LinearWiggleDisplay/models/model.js CHANGED Viewed

@@ -8,7 +8,7 @@ import { axisPropsFromTickScale } from 'react-d3-axis-mod';
 import { getNiceDomain, getScale, getStats, statsAutorun, YSCALEBAR_LABEL_OFFSET, } from '../../util';
 import Tooltip from '../components/Tooltip';
 import { YScaleBar } from '../components/WiggleDisplayComponent';
-const SetMinMaxDlg = lazy(() => import('../components/SetMinMaxDialog'));
+const SetMinMaxDlg = lazy(() => import('../../shared/SetMinMaxDialog'));
 const SetColorDlg = lazy(() => import('../components/SetColorDialog'));
 // using a map because it preserves order
 const rendererTypes = new Map([
@@ -88,9 +88,8 @@ function stateModelFactory(pluginManager, configSchema) {
         }), {}),
     }))
         .volatile(() => ({
-        statsReady: false,
         message: undefined,
-        stats: { scoreMin: 0, scoreMax: 50 },
+        stats: undefined,
         statsFetchInProgress: undefined,
     }))
         .actions(self => ({
@@ -100,11 +99,13 @@ function stateModelFactory(pluginManager, configSchema) {
         updateStats(stats) {
             const { scoreMin, scoreMax } = stats;
             const EPSILON = 0.000001;
-            if (Math.abs(self.stats.scoreMax - scoreMax) > EPSILON ||
+            if (!self.stats) {
+                self.stats = { scoreMin, scoreMax };
+            }
+            else if (Math.abs(self.stats.scoreMax - scoreMax) > EPSILON ||
                 Math.abs(self.stats.scoreMin - scoreMin) > EPSILON) {
                 self.stats = { scoreMin, scoreMax };
             }
-            self.statsReady = true;
         },
         /**
          * #action
@@ -331,6 +332,9 @@ function stateModelFactory(pluginManager, configSchema) {
              */
             get domain() {
                 const { stats, scaleType, minScore, maxScore } = self;
+                if (!stats) {
+                    return undefined;
+                }
                 const ret = getNiceDomain({
                     domain: [stats.scoreMin, stats.scoreMax],
                     bounds: [minScore, maxScore],
@@ -396,6 +400,9 @@ function stateModelFactory(pluginManager, configSchema) {
             const minimalTicks = getConf(self, 'minimalTicks');
             const inverted = getConf(self, 'inverted');
             const range = [height - YSCALEBAR_LABEL_OFFSET, YSCALEBAR_LABEL_OFFSET];
+            if (!domain) {
+                return undefined;
+            }
             const scale = getScale({
                 scaleType,
                 domain,
@@ -426,7 +433,7 @@ function stateModelFactory(pluginManager, configSchema) {
                 const { filters, ticks, height, resolution, scaleOpts } = self;
                 return {
                     ...superProps,
-                    notReady: superProps.notReady || !self.statsReady,
+                    notReady: superProps.notReady || !self.stats,
                     rpcDriverName: self.rpcDriverName,
                     displayModel: self,
                     config: self.rendererConfig,
@@ -614,7 +621,7 @@ function stateModelFactory(pluginManager, configSchema) {
              * #action
              */
             async renderSvg(opts) {
-                await when(() => self.statsReady && !!self.regionCannotBeRenderedText);
+                await when(() => !!self.stats && !!self.regionCannotBeRenderedText);
                 const { needsScalebar, stats } = self;
                 const { offsetPx } = getContainingView(self);
                 return (React.createElement(React.Fragment, null,

package/esm/LinearWiggleDisplay/models/model.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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package/esm/MultiLinearWiggleDisplay/components/DraggableDialog.d.ts ADDED Viewed

@@ -0,0 +1,7 @@
+/// <reference types="react" />
+import { DialogProps } from '@mui/material';
+declare function DraggableDialog(props: DialogProps & {
+    title: string;
+}): JSX.Element;
+declare const _default: typeof DraggableDialog;
+export default _default;

package/esm/MultiLinearWiggleDisplay/components/DraggableDialog.js ADDED Viewed

@@ -0,0 +1,38 @@
+import React from 'react';
+import { Dialog, DialogTitle, IconButton, Divider, Paper, ScopedCssBaseline, } from '@mui/material';
+import { observer } from 'mobx-react';
+import { makeStyles } from 'tss-react/mui';
+import Draggable from 'react-draggable';
+// icons
+import CloseIcon from '@mui/icons-material/Close';
+const useStyles = makeStyles()(theme => ({
+    closeButton: {
+        position: 'absolute',
+        right: theme.spacing(1),
+        top: theme.spacing(1),
+        color: theme.palette.grey[500],
+    },
+}));
+// draggable dialog demo https://mui.com/material-ui/react-dialog/#draggable-dialog
+function PaperComponent(props) {
+    return (React.createElement(Draggable, { handle: "#draggable-dialog-title", cancel: '[class*="MuiDialogContent-root"]' },
+        React.createElement(Paper, { ...props })));
+}
+function DraggableDialog(props) {
+    const { classes } = useStyles();
+    const { title, children, onClose } = props;
+    return (React.createElement(Dialog, { ...props, PaperComponent: PaperComponent, "aria-labelledby": "draggable-dialog-title" // this area is important for the draggable functionality
+     },
+        React.createElement(ScopedCssBaseline, null,
+            React.createElement(DialogTitle, { style: { cursor: 'move' }, id: "draggable-dialog-title" },
+                title,
+                onClose ? (React.createElement(IconButton, { className: classes.closeButton, onClick: () => {
+                        // @ts-ignore
+                        onClose();
+                    } },
+                    React.createElement(CloseIcon, null))) : null),
+            React.createElement(Divider, null),
+            children)));
+}
+export default observer(DraggableDialog);
+//# sourceMappingURL=DraggableDialog.js.map

package/esm/MultiLinearWiggleDisplay/components/DraggableDialog.js.map ADDED Viewed

@@ -0,0 +1 @@

+ {"version":3,"file":"DraggableDialog.js","sourceRoot":"","sources":["../../../src/MultiLinearWiggleDisplay/components/DraggableDialog.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,MAAM,OAAO,CAAA;AACzB,OAAO,EACL,MAAM,EACN,WAAW,EACX,UAAU,EACV,OAAO,EAEP,KAAK,EAEL,iBAAiB,GAClB,MAAM,eAAe,CAAA;AACtB,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AACrC,OAAO,EAAE,UAAU,EAAE,MAAM,eAAe,CAAA;AAC1C,OAAO,SAAS,MAAM,iBAAiB,CAAA;AAEvC,QAAQ;AACR,OAAO,SAAS,MAAM,2BAA2B,CAAA;AAEjD,MAAM,SAAS,GAAG,UAAU,EAAE,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;IACvC,WAAW,EAAE;QACX,QAAQ,EAAE,UAAU;QACpB,KAAK,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;QACvB,GAAG,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;QACrB,KAAK,EAAE,KAAK,CAAC,OAAO,CAAC,IAAI,CAAC,GAAG,CAAC;KAC/B;CACF,CAAC,CAAC,CAAA;AAEH,mFAAmF;AACnF,SAAS,cAAc,CAAC,KAAiB;IACvC,OAAO,CACL,oBAAC,SAAS,IACR,MAAM,EAAC,yBAAyB,EAChC,MAAM,EAAE,kCAAkC;QAE1C,oBAAC,KAAK,OAAK,KAAK,GAAI,CACV,CACb,CAAA;AACH,CAAC;AAED,SAAS,eAAe,CAAC,KAAsC;IAC7D,MAAM,EAAE,OAAO,EAAE,GAAG,SAAS,EAAE,CAAA;IAC/B,MAAM,EAAE,KAAK,EAAE,QAAQ,EAAE,OAAO,EAAE,GAAG,KAAK,CAAA;IAE1C,OAAO,CACL,oBAAC,MAAM,OACD,KAAK,EACT,cAAc,EAAE,cAAc,qBACd,wBAAwB,CAAC,yDAAyD;;QAElG,oBAAC,iBAAiB;YAChB,oBAAC,WAAW,IAAC,KAAK,EAAE,EAAE,MAAM,EAAE,MAAM,EAAE,EAAE,EAAE,EAAC,wBAAwB;gBAChE,KAAK;gBACL,OAAO,CAAC,CAAC,CAAC,CACT,oBAAC,UAAU,IACT,SAAS,EAAE,OAAO,CAAC,WAAW,EAC9B,OAAO,EAAE,GAAG,EAAE;wBACZ,aAAa;wBACb,OAAO,EAAE,CAAA;oBACX,CAAC;oBAED,oBAAC,SAAS,OAAG,CACF,CACd,CAAC,CAAC,CAAC,IAAI,CACI;YACd,oBAAC,OAAO,OAAG;YACV,QAAQ,CACS,CACb,CACV,CAAA;AACH,CAAC;AACD,eAAe,QAAQ,CAAC,eAAe,CAAC,CAAA"}

package/esm/MultiLinearWiggleDisplay/components/SetColorDialog.js CHANGED Viewed

@@ -1,48 +1,30 @@
 import React, { useState } from 'react';
-import { Button, Dialog, DialogContent, DialogActions, DialogTitle, IconButton, Paper, } from '@mui/material';
+import { Button, DialogContent, DialogActions } from '@mui/material';
 import { makeStyles } from 'tss-react/mui';
 import { getStr, isUriLocation, measureGridWidth, useLocalStorage, } from '@jbrowse/core/util';
 import { DataGrid } from '@mui/x-data-grid';
-import Draggable from 'react-draggable';
 import clone from 'clone';
 // locals
+import DraggableDialog from './DraggableDialog';
 import ColorPicker, { ColorPopover } from '@jbrowse/core/ui/ColorPicker';
 import { UriLink } from '@jbrowse/core/BaseFeatureWidget/BaseFeatureDetail';
 import { moveUp, moveDown } from './util';
 // icons
-import CloseIcon from '@mui/icons-material/Close';
 import KeyboardDoubleArrowUpIcon from '@mui/icons-material/KeyboardDoubleArrowUp';
 import KeyboardDoubleArrowDownIcon from '@mui/icons-material/KeyboardDoubleArrowDown';
 import KeyboardArrowDownIcon from '@mui/icons-material/KeyboardArrowDown';
 import KeyboardArrowUpIcon from '@mui/icons-material/KeyboardArrowUp';
-const useStyles = makeStyles()(theme => ({
-    closeButton: {
-        position: 'absolute',
-        right: theme.spacing(1),
-        top: theme.spacing(1),
-        color: theme.palette.grey[500],
-    },
+const useStyles = makeStyles()({
     content: {
         minWidth: 800,
     },
-}));
-// draggable dialog demo https://mui.com/material-ui/react-dialog/#draggable-dialog
-function PaperComponent(props) {
-    return (React.createElement(Draggable, { handle: "#draggable-dialog-title", cancel: '[class*="MuiDialogContent-root"]' },
-        React.createElement(Paper, { ...props })));
-}
+});
 export default function SetColorDialog({ model, handleClose, }) {
     const { classes } = useStyles();
     const { sources } = model;
     const [currLayout, setCurrLayout] = useState(clone(sources || []));
     const [showTips, setShowTips] = useLocalStorage('multiwiggle-showTips', true);
-    return (React.createElement(Dialog, { PaperComponent: PaperComponent, open: true, onClose: handleClose, maxWidth: "xl", "aria-labelledby": "draggable-dialog-title" // this area is important for the draggable functionality
-     },
-        React.createElement(DialogTitle, { style: { cursor: 'move' }, id: "draggable-dialog-title" },
-            "Multi-wiggle color/arrangement editor",
-            ' ',
-            React.createElement(IconButton, { className: classes.closeButton, onClick: handleClose },
-                React.createElement(CloseIcon, null))),
+    return (React.createElement(DraggableDialog, { open: true, onClose: handleClose, maxWidth: "xl", title: 'Multi-wiggle color/arrangement editor' },
         React.createElement(DialogContent, { className: classes.content },
             React.createElement(Button, { variant: "contained", style: { float: 'right' }, onClick: () => setShowTips(!showTips) }, showTips ? 'Hide tips' : 'Show tips'),
             React.createElement("br", null),

package/esm/MultiLinearWiggleDisplay/components/SetColorDialog.js.map CHANGED Viewed

	@@ -1 +1 @@
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1	+ 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package/esm/MultiLinearWiggleDisplay/components/WiggleDisplayComponent.js CHANGED Viewed

@@ -37,7 +37,7 @@ const RectBg = (props) => {
 const ScoreLegend = observer(({ model }) => {
     const { ticks, scaleType } = model;
     const { width } = getContainingView(model);
-    const legend = `[${ticks.values[0]}-${ticks.values[1]}]` +
+    const legend = `[${ticks === null || ticks === void 0 ? void 0 : ticks.values[0]}-${ticks === null || ticks === void 0 ? void 0 : ticks.values[1]}]` +
         (scaleType === 'log' ? ' (log scale)' : '');
     const len = measureText(legend, 14);
     const padding = 25;

package/esm/MultiLinearWiggleDisplay/components/WiggleDisplayComponent.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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1	+ 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package/esm/MultiLinearWiggleDisplay/index.js CHANGED Viewed

@@ -7,6 +7,7 @@ export default (pluginManager) => {
         const configSchema = configSchemaFactory(pluginManager);
         return new DisplayType({
             name: 'MultiLinearWiggleDisplay',
+            displayName: 'Multi-wiggle display',
             configSchema,
             stateModel: modelFactory(pluginManager, configSchema),
             trackType: 'MultiQuantitativeTrack',

package/esm/MultiLinearWiggleDisplay/index.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- {"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/MultiLinearWiggleDisplay/index.ts"],"names":[],"mappings":"AACA,OAAO,WAAW,MAAM,iDAAiD,CAAA;AAEzE,OAAO,mBAAmB,MAAM,uBAAuB,CAAA;AACvD,OAAO,YAAY,MAAM,gBAAgB,CAAA;AACzC,OAAO,cAAc,MAAM,qCAAqC,CAAA;AAEhE,eAAe,CAAC,aAA4B,EAAE,EAAE;IAC9C,aAAa,CAAC,cAAc,CAAC,GAAG,EAAE;QAChC,MAAM,YAAY,GAAG,mBAAmB,CAAC,aAAa,CAAC,CAAA;QACvD,OAAO,IAAI,WAAW,CAAC;YACrB,IAAI,EAAE,0BAA0B;YAChC,YAAY;YACZ,UAAU,EAAE,YAAY,CAAC,aAAa,EAAE,YAAY,CAAC;YACrD,SAAS,EAAE,wBAAwB;YACnC,QAAQ,EAAE,kBAAkB;YAC5B,cAAc;SACf,CAAC,CAAA;IACJ,CAAC,CAAC,CAAA;AACJ,CAAC,CAAA"}
1	+ {"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/MultiLinearWiggleDisplay/index.ts"],"names":[],"mappings":"AACA,OAAO,WAAW,MAAM,iDAAiD,CAAA;AAEzE,OAAO,mBAAmB,MAAM,uBAAuB,CAAA;AACvD,OAAO,YAAY,MAAM,gBAAgB,CAAA;AACzC,OAAO,cAAc,MAAM,qCAAqC,CAAA;AAEhE,eAAe,CAAC,aAA4B,EAAE,EAAE;IAC9C,aAAa,CAAC,cAAc,CAAC,GAAG,EAAE;QAChC,MAAM,YAAY,GAAG,mBAAmB,CAAC,aAAa,CAAC,CAAA;QACvD,OAAO,IAAI,WAAW,CAAC;YACrB,IAAI,EAAE,0BAA0B;YAChC,WAAW,EAAE,sBAAsB;YACnC,YAAY;YACZ,UAAU,EAAE,YAAY,CAAC,aAAa,EAAE,YAAY,CAAC;YACrD,SAAS,EAAE,wBAAwB;YACnC,QAAQ,EAAE,kBAAkB;YAC5B,cAAc;SACf,CAAC,CAAA;IACJ,CAAC,CAAC,CAAA;AACJ,CAAC,CAAA"}

package/esm/MultiLinearWiggleDisplay/models/model.d.ts CHANGED Viewed

@@ -137,10 +137,10 @@ declare const stateModelFactory: (pluginManager: PluginManager, configSchema: An
     reload(): void;
 } & {
     currBpPerPx: number;
+    scrollTop: number;
     message: string;
     featureIdUnderMouse: string | undefined;
     contextMenuFeature: Feature | undefined;
-    scrollTop: number;
     estimatedRegionStatsP: Promise<import("@jbrowse/core/data_adapters/BaseAdapter").Stats> | undefined;
     estimatedRegionStats: import("@jbrowse/core/data_adapters/BaseAdapter").Stats | undefined;
 } & {
@@ -208,12 +208,11 @@ declare const stateModelFactory: (pluginManager: PluginManager, configSchema: An
         overrideHeight: number;
     }): Promise<JSX.Element>;
 } & {
-    statsReady: boolean;
     message: string | undefined;
     stats: {
         scoreMin: number;
         scoreMax: number;
-    };
+    } | undefined;
     statsRegion: string | undefined;
     statsFetchInProgress: AbortController | undefined;
     featureUnderMouseVolatile: Feature | undefined;
@@ -275,14 +274,14 @@ declare const stateModelFactory: (pluginManager: PluginManager, configSchema: An
 } & {
     readonly filled: boolean;
     readonly summaryScoreModeSetting: string;
-    readonly domain: number[];
+    readonly domain: number[] | undefined;
     readonly scaleOpts: {
         autoscaleType: string;
-        domain: number[];
+        domain: number[] | undefined;
         stats: {
             scoreMin: number;
             scoreMax: number;
-        };
+        } | undefined;
         scaleType: string;
         inverted: any;
     };
@@ -297,7 +296,7 @@ declare const stateModelFactory: (pluginManager: PluginManager, configSchema: An
         values: number[];
         format: (d: import("d3-scale").NumberValue) => string;
         position: import("d3-scale").ScaleLinear<number, number, never> | import("d3-scale").ScaleQuantize<number, never>;
-    };
+    } | undefined;
     readonly colors: string[];
     readonly adapterCapabilities: string[];
 } & {