npm - @jbrowse/plugin-wiggle - Versions diffs - 2.2.1 → 2.3.0 - Mend

@jbrowse/plugin-wiggle 2.2.1 → 2.3.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Files changed (109) hide show

package/dist/BigWigAdapter/index.js CHANGED Viewed

@@ -31,6 +31,7 @@ const configSchema_1 = __importDefault(require("./configSchema"));
 exports.default = (pluginManager) => {
     pluginManager.addAdapterType(() => new AdapterType_1.default({
         name: 'BigWigAdapter',
+        displayName: 'BigWig adapter',
         configSchema: configSchema_1.default,
         adapterCapabilities: [
             'hasResolution',

package/dist/BigWigAdapter/index.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- {"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/BigWigAdapter/index.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;AACA,kGAAyE;AACzE,kEAAyC;AAEzC,kBAAe,CAAC,aAA4B,EAAE,EAAE;IAC9C,aAAa,CAAC,cAAc,CAC1B,GAAG,EAAE,CACH,IAAI,qBAAW,CAAC;QACd,IAAI,EAAE,eAAe;QACrB,YAAY,EAAZ,sBAAY;QACZ,mBAAmB,EAAE;YACnB,eAAe;YACf,eAAe;YACf,gBAAgB;SACjB;QACD,eAAe,EAAE,GAAG,EAAE,CAAC,kDAAO,iBAAiB,IAAE,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,OAAO,CAAC;KACtE,CAAC,CACL,CAAA;AACH,CAAC,CAAA"}
1	+ {"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/BigWigAdapter/index.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;AACA,kGAAyE;AACzE,kEAAyC;AAEzC,kBAAe,CAAC,aAA4B,EAAE,EAAE;IAC9C,aAAa,CAAC,cAAc,CAC1B,GAAG,EAAE,CACH,IAAI,qBAAW,CAAC;QACd,IAAI,EAAE,eAAe;QACrB,WAAW,EAAE,gBAAgB;QAC7B,YAAY,EAAZ,sBAAY;QACZ,mBAAmB,EAAE;YACnB,eAAe;YACf,eAAe;YACf,gBAAgB;SACjB;QACD,eAAe,EAAE,GAAG,EAAE,CAAC,kDAAO,iBAAiB,IAAE,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,OAAO,CAAC;KACtE,CAAC,CACL,CAAA;AACH,CAAC,CAAA"}

package/dist/LinearWiggleDisplay/components/SetColorDialog.js CHANGED Viewed

@@ -22,33 +22,17 @@ var __importStar = (this && this.__importStar) || function (mod) {
     __setModuleDefault(result, mod);
     return result;
 };
-var __importDefault = (this && this.__importDefault) || function (mod) {
-    return (mod && mod.__esModule) ? mod : { "default": mod };
-};
 Object.defineProperty(exports, "__esModule", { value: true });
 const react_1 = __importStar(require("react"));
 const mobx_react_1 = require("mobx-react");
 const material_1 = require("@mui/material");
-const mui_1 = require("tss-react/mui");
-const Close_1 = __importDefault(require("@mui/icons-material/Close"));
+const ui_1 = require("@jbrowse/core/ui");
 const ColorPicker_1 = require("@jbrowse/core/ui/ColorPicker");
-const useStyles = (0, mui_1.makeStyles)()(theme => ({
-    closeButton: {
-        position: 'absolute',
-        right: theme.spacing(1),
-        top: theme.spacing(1),
-        color: theme.palette.grey[500],
-    },
-}));
 function SetColorDialog({ model, handleClose, }) {
-    const { classes } = useStyles();
     const [posneg, setPosNeg] = (0, react_1.useState)(false);
-    return (react_1.default.createElement(material_1.Dialog, { open: true, onClose: handleClose },
-        react_1.default.createElement(material_1.DialogTitle, null,
-            "Select either an overall color, or the positive/negative colors. Note that density renderers only work properly with positive/negative colors",
-            react_1.default.createElement(material_1.IconButton, { "aria-label": "close", className: classes.closeButton, onClick: handleClose },
-                react_1.default.createElement(Close_1.default, null))),
+    return (react_1.default.createElement(ui_1.Dialog, { open: true, onClose: handleClose, title: "Set color" },
         react_1.default.createElement(material_1.DialogContent, null,
+            react_1.default.createElement(material_1.Typography, null, "Select either an overall color, or the positive/negative colors. Note that density renderers only work properly with positive/negative colors"),
             react_1.default.createElement(material_1.FormControlLabel, { checked: !posneg, onClick: () => setPosNeg(false), control: react_1.default.createElement(material_1.Radio, null), label: 'Overall color' }),
             react_1.default.createElement(material_1.FormControlLabel, { checked: posneg, onClick: () => setPosNeg(true), control: react_1.default.createElement(material_1.Radio, null), label: 'Positive/negative color' }),
             posneg ? (react_1.default.createElement(react_1.default.Fragment, null,

package/dist/LinearWiggleDisplay/components/SetColorDialog.js.map CHANGED Viewed

	@@ -1 +1 @@
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1	+ {"version":3,"file":"SetColorDialog.js","sourceRoot":"","sources":["../../../src/LinearWiggleDisplay/components/SetColorDialog.tsx"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;AAAA,+CAAuC;AACvC,2CAAqC;AACrC,4CAOsB;AACtB,yCAAyC;AACzC,8DAA0D;AAE1D,SAAS,cAAc,CAAC,EACtB,KAAK,EACL,WAAW,GAWZ;IACC,MAAM,CAAC,MAAM,EAAE,SAAS,CAAC,GAAG,IAAA,gBAAQ,EAAC,KAAK,CAAC,CAAA;IAE3C,OAAO,CACL,8BAAC,WAAM,IAAC,IAAI,QAAC,OAAO,EAAE,WAAW,EAAE,KAAK,EAAC,WAAW;QAClD,8BAAC,wBAAa;YACZ,8BAAC,qBAAU,wJAIE;YACb,8BAAC,2BAAgB,IACf,OAAO,EAAE,CAAC,MAAM,EAChB,OAAO,EAAE,GAAG,EAAE,CAAC,SAAS,CAAC,KAAK,CAAC,EAC/B,OAAO,EAAE,8BAAC,gBAAK,OAAG,EAClB,KAAK,EAAE,eAAe,GACtB;YACF,8BAAC,2BAAgB,IACf,OAAO,EAAE,MAAM,EACf,OAAO,EAAE,GAAG,EAAE,CAAC,SAAS,CAAC,IAAI,CAAC,EAC9B,OAAO,EAAE,8BAAC,gBAAK,OAAG,EAClB,KAAK,EAAE,yBAAyB,GAChC;YAED,MAAM,CAAC,CAAC,CAAC,CACR;gBACE,8BAAC,qBAAU,yBAA4B;gBACvC,8BAAC,yBAAW,IACV,KAAK,EAAE,KAAK,CAAC,QAAQ,IAAI,OAAO,EAChC,QAAQ,EAAE,KAAK,CAAC,EAAE;wBAChB,KAAK,CAAC,WAAW,CAAC,KAAK,CAAC,CAAA;wBACxB,KAAK,CAAC,QAAQ,CAAC,SAAS,CAAC,CAAA;oBAC3B,CAAC,GACD;gBACF,8BAAC,qBAAU,yBAA4B;gBAEvC,8BAAC,yBAAW,IACV,KAAK,EAAE,KAAK,CAAC,QAAQ,IAAI,OAAO,EAChC,QAAQ,EAAE,KAAK,CAAC,EAAE;wBAChB,KAAK,CAAC,WAAW,CAAC,KAAK,CAAC,CAAA;wBACxB,KAAK,CAAC,QAAQ,CAAC,SAAS,CAAC,CAAA;oBAC3B,CAAC,GACD,CACD,CACJ,CAAC,CAAC,CAAC,CACF;gBACE,8BAAC,qBAAU,wBAA2B;gBACtC,8BAAC,yBAAW,IACV,KAAK,EAAE,KAAK,CAAC,KAAK,IAAI,OAAO,EAC7B,QAAQ,EAAE,KAAK,CAAC,EAAE,CAAC,KAAK,CAAC,QAAQ,CAAC,KAAK,CAAC,GACxC,CACD,CACJ,CACa;QAChB,8BAAC,wBAAa;YACZ,8BAAC,iBAAM,IACL,OAAO,EAAE,GAAG,EAAE;oBACZ,KAAK,CAAC,WAAW,CAAC,SAAS,CAAC,CAAA;oBAC5B,KAAK,CAAC,WAAW,CAAC,SAAS,CAAC,CAAA;oBAC5B,KAAK,CAAC,QAAQ,CAAC,SAAS,CAAC,CAAA;gBAC3B,CAAC,EACD,KAAK,EAAC,WAAW,EACjB,OAAO,EAAC,WAAW,sBAGZ;YAET,8BAAC,iBAAM,IACL,OAAO,EAAC,WAAW,EACnB,KAAK,EAAC,SAAS,EACf,IAAI,EAAC,QAAQ,EACb,OAAO,EAAE,GAAG,EAAE,CAAC,WAAW,EAAE,aAGrB,CACK,CACT,CACV,CAAA;AACH,CAAC;AAED,kBAAe,IAAA,qBAAQ,EAAC,cAAc,CAAC,CAAA"}

package/dist/LinearWiggleDisplay/components/WiggleDisplayComponent.js CHANGED Viewed

@@ -5,10 +5,10 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.YScaleBar = void 0;
 const react_1 = __importDefault(require("react"));
+const mobx_react_1 = require("mobx-react");
 const util_1 = require("@jbrowse/core/util");
 const configuration_1 = require("@jbrowse/core/configuration");
 const plugin_linear_genome_view_1 = require("@jbrowse/plugin-linear-genome-view");
-const mobx_react_1 = require("mobx-react");
 const YScaleBar_1 = __importDefault(require("./YScaleBar"));
 exports.YScaleBar = YScaleBar_1.default;
 const LinearWiggleDisplay = (0, mobx_react_1.observer)((props) => {

package/dist/LinearWiggleDisplay/components/WiggleDisplayComponent.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- {"version":3,"file":"WiggleDisplayComponent.js","sourceRoot":"","sources":["../../../src/LinearWiggleDisplay/components/WiggleDisplayComponent.tsx"],"names":[],"mappings":";;;;;;AAAA,kDAAyB;AACzB,6CAI2B;AAC3B,+DAAqD;AACrD,kFAG2C;~~AAC3C~~,~~2CAAqC;AAErC,~~4DAAmC;AAqC1B,oBArCF,mBAAS,CAqCE;AAjClB,MAAM,mBAAmB,GAAG,IAAA,qBAAQ,EAAC,CAAC,KAAoC,EAAE,EAAE;IAC5E,MAAM,EAAE,KAAK,EAAE,GAAG,KAAK,CAAA;IACvB,MAAM,EAAE,KAAK,EAAE,MAAM,EAAE,aAAa,EAAE,GAAG,KAAK,CAAA;IAE9C,MAAM,EAAE,WAAW,EAAE,GAAG,IAAA,wBAAiB,EAAC,KAAK,CAAQ,CAAA;IACvD,MAAM,KAAK,GAAG,IAAA,yBAAkB,EAAC,KAAK,CAAC,CAAA;IACvC,MAAM,IAAI,GACR,WAAW,KAAK,aAAa;QAC3B,CAAC,CAAC,IAAA,kBAAW,EAAC,IAAA,uBAAO,EAAC,KAAK,EAAE,MAAM,CAAC,EAAE,IAAI,CAAC,GAAG,GAAG;QACjD,CAAC,CAAC,EAAE,CAAA;IACR,OAAO,CACL;QACE,8BAAC,sDAA0B,OAAK,KAAK,GAAI;QACxC,KAAK,IAAI,aAAa,CAAC,CAAC,CAAC,CACxB,uCACE,KAAK,EAAE;gBACL,QAAQ,EAAE,UAAU;gBACpB,GAAG,EAAE,CAAC;gBACN,IAAI;gBACJ,aAAa,EAAE,MAAM;gBACrB,MAAM;gBACN,KAAK,EAAE,EAAE;aACV;YAED,8BAAC,mBAAS,IAAC,KAAK,EAAE,KAAK,GAAI,CACvB,CACP,CAAC,CAAC,CAAC,IAAI,CACJ,CACP,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,kBAAe,mBAAmB,CAAA"}
1	+ {"version":3,"file":"WiggleDisplayComponent.js","sourceRoot":"","sources":["../../../src/LinearWiggleDisplay/components/WiggleDisplayComponent.tsx"],"names":[],"mappings":";;;;;;AAAA,kDAAyB;AACzB,2CAAqC;AACrC,6CAI2B;AAC3B,+DAAqD;AACrD,kFAG2C;AAI3C,4DAAmC;AAqC1B,oBArCF,mBAAS,CAqCE;AAjClB,MAAM,mBAAmB,GAAG,IAAA,qBAAQ,EAAC,CAAC,KAAoC,EAAE,EAAE;IAC5E,MAAM,EAAE,KAAK,EAAE,GAAG,KAAK,CAAA;IACvB,MAAM,EAAE,KAAK,EAAE,MAAM,EAAE,aAAa,EAAE,GAAG,KAAK,CAAA;IAE9C,MAAM,EAAE,WAAW,EAAE,GAAG,IAAA,wBAAiB,EAAC,KAAK,CAAQ,CAAA;IACvD,MAAM,KAAK,GAAG,IAAA,yBAAkB,EAAC,KAAK,CAAC,CAAA;IACvC,MAAM,IAAI,GACR,WAAW,KAAK,aAAa;QAC3B,CAAC,CAAC,IAAA,kBAAW,EAAC,IAAA,uBAAO,EAAC,KAAK,EAAE,MAAM,CAAC,EAAE,IAAI,CAAC,GAAG,GAAG;QACjD,CAAC,CAAC,EAAE,CAAA;IACR,OAAO,CACL;QACE,8BAAC,sDAA0B,OAAK,KAAK,GAAI;QACxC,KAAK,IAAI,aAAa,CAAC,CAAC,CAAC,CACxB,uCACE,KAAK,EAAE;gBACL,QAAQ,EAAE,UAAU;gBACpB,GAAG,EAAE,CAAC;gBACN,IAAI;gBACJ,aAAa,EAAE,MAAM;gBACrB,MAAM;gBACN,KAAK,EAAE,EAAE;aACV;YAED,8BAAC,mBAAS,IAAC,KAAK,EAAE,KAAK,GAAI,CACvB,CACP,CAAC,CAAC,CAAC,IAAI,CACJ,CACP,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,kBAAe,mBAAmB,CAAA"}

package/dist/LinearWiggleDisplay/index.js CHANGED Viewed

@@ -18,6 +18,7 @@ exports.default = (pluginManager) => {
         const stateModel = (0, model_1.default)(pluginManager, configSchema);
         return new DisplayType_1.default({
             name: 'LinearWiggleDisplay',
+            displayName: 'Wiggle display',
             configSchema,
             stateModel,
             trackType: 'QuantitativeTrack',

package/dist/LinearWiggleDisplay/index.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- {"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/LinearWiggleDisplay/index.ts"],"names":[],"mappings":";;;;;;AACA,kGAAyE;AAEzE,yEAAuD;AACvD,2DAAyC;~~AAmBhB~~,~~uBAnBlB~~,eAAY,~~CAmBkB~~;~~AAlBrC~~,iGAAgE;~~AAkBvD~~,~~yBAlBF~~,gCAAc,~~CAkBE~~;~~AAjBvB~~,mEAA0C;~~AAiBH~~,~~kBAjBhC~~,iBAAO,~~CAiBgC~~;~~AAf9C~~,kBAAe,CAAC,aAA4B,EAAE,EAAE;IAC9C,aAAa,CAAC,cAAc,CAAC,GAAG,EAAE;QAChC,MAAM,YAAY,GAAG,IAAA,sBAAmB,EAAC,aAAa,CAAC,CAAA;QACvD,MAAM,UAAU,GAAG,IAAA,eAAY,EAAC,aAAa,EAAE,YAAY,CAAC,CAAA;QAC5D,OAAO,IAAI,qBAAW,CAAC;YACrB,IAAI,EAAE,qBAAqB;YAC3B,YAAY;YACZ,UAAU;YACV,SAAS,EAAE,mBAAmB;YAC9B,QAAQ,EAAE,kBAAkB;YAC5B,cAAc,EAAd,gCAAc;SACf,CAAC,CAAA;IACJ,CAAC,CAAC,CAAA;AACJ,CAAC,CAAA"}
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package/dist/LinearWiggleDisplay/models/model.d.ts CHANGED Viewed

@@ -12,7 +12,9 @@ declare function stateModelFactory(pluginManager: PluginManager, configSchema: A
     type: import("mobx-state-tree").ISimpleType<string>;
     rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
 } & {
-    height: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<number>, [undefined]>;
+    height: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<number>, [undefined]>; /**
+     * #property
+     */
     blockState: import("mobx-state-tree").IMapType<import("mobx-state-tree").IModelType<{
         key: import("mobx-state-tree").ISimpleType<string>;
         region: import("mobx-state-tree").IModelType<{
@@ -39,7 +41,9 @@ declare function stateModelFactory(pluginManager: PluginManager, configSchema: A
         status: string;
         error: unknown;
         message: string | undefined;
-        maxHeightReached: boolean;
+        maxHeightReached: boolean; /**
+         * #property
+         */
         ReactComponent: ({ model, }: {
             model: any; /**
              * #property
@@ -160,6 +164,9 @@ declare function stateModelFactory(pluginManager: PluginManager, configSchema: A
             type: string;
             rpcDriverName: string | undefined;
         } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
+            /**
+             * #property
+             */
             rendererTypeName: string;
             error: unknown;
         } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
@@ -174,23 +181,23 @@ declare function stateModelFactory(pluginManager: PluginManager, configSchema: A
     readonly adapterConfig: any;
     readonly parentTrack: any;
     renderProps(): any;
-    readonly rendererType: import("@jbrowse/core/pluggableElementTypes").RendererType;
+    readonly rendererType: import("@jbrowse/core/pluggableElementTypes").RendererType; /**
+     * #action
+     */
     readonly DisplayMessageComponent: React.FC<any> | undefined;
     trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
     readonly viewMenuActions: import("@jbrowse/core/ui").MenuItem[];
     regionCannotBeRendered(): undefined;
 } & {
-    setError(error?: unknown): void; /**
-     * #action
-     */
+    setError(error?: unknown): void;
     setRpcDriverName(rpcDriverName: string): void;
     reload(): void;
 } & {
     currBpPerPx: number;
+    scrollTop: number;
     message: string;
     featureIdUnderMouse: string | undefined;
     contextMenuFeature: Feature | undefined;
-    scrollTop: number;
     estimatedRegionStatsP: Promise<import("@jbrowse/core/data_adapters/BaseAdapter").Stats> | undefined;
     estimatedRegionStats: import("@jbrowse/core/data_adapters/BaseAdapter").Stats | undefined;
 } & {
@@ -209,11 +216,11 @@ declare function stateModelFactory(pluginManager: PluginManager, configSchema: A
     searchFeatureByID(id: string): [number, number, number, number] | undefined;
     readonly currentBytesRequested: number;
     readonly currentFeatureScreenDensity: number;
-    readonly maxFeatureScreenDensity: any; /**
+    readonly maxFeatureScreenDensity: any;
+    readonly estimatedStatsReady: boolean;
+    readonly maxAllowableBytes: number; /**
      * #getter
      */
-    readonly estimatedStatsReady: boolean;
-    readonly maxAllowableBytes: number;
 } & {
     setMessage(message: string): void;
     afterAttach(): void;
@@ -236,7 +243,9 @@ declare function stateModelFactory(pluginManager: PluginManager, configSchema: A
     clearFeatureSelection(): void;
     setFeatureIdUnderMouse(feature: string | undefined): void;
     reload(): void;
-    setContextMenuFeature(feature?: Feature | undefined): void;
+    setContextMenuFeature(feature?: Feature | undefined): void; /**
+     * #method
+     */
 } & {
     readonly regionTooLarge: boolean;
     readonly regionTooLargeReason: string;
@@ -260,12 +269,11 @@ declare function stateModelFactory(pluginManager: PluginManager, configSchema: A
         overrideHeight: number;
     }): Promise<JSX.Element>;
 } & {
-    statsReady: boolean;
     message: string | undefined;
     stats: {
         scoreMin: number;
         scoreMax: number;
-    };
+    } | undefined;
     statsFetchInProgress: AbortController | undefined;
 } & {
     /**
@@ -397,7 +405,7 @@ declare function stateModelFactory(pluginManager: PluginManager, configSchema: A
     /**
      * #getter
      */
-    readonly domain: number[];
+    readonly domain: number[] | undefined;
     /**
      * #getter
      */
@@ -406,11 +414,11 @@ declare function stateModelFactory(pluginManager: PluginManager, configSchema: A
      * #getter
      */
     readonly scaleOpts: {
-        domain: number[];
+        domain: number[] | undefined;
         stats: {
             scoreMin: number;
             scoreMax: number;
-        };
+        } | undefined;
         autoscaleType: any;
         scaleType: any;
         inverted: any;
@@ -436,7 +444,7 @@ declare function stateModelFactory(pluginManager: PluginManager, configSchema: A
         values: number[];
         format: (d: import("d3-scale").NumberValue) => string;
         position: import("d3-scale").ScaleLinear<number, number, never> | import("d3-scale").ScaleQuantize<number, never>;
-    };
+    } | undefined;
     /**
      * #getter
      */

package/dist/LinearWiggleDisplay/models/model.js CHANGED Viewed

@@ -36,7 +36,7 @@ const react_d3_axis_mod_1 = require("react-d3-axis-mod");
 const util_2 = require("../../util");
 const Tooltip_1 = __importDefault(require("../components/Tooltip"));
 const WiggleDisplayComponent_1 = require("../components/WiggleDisplayComponent");
-const SetMinMaxDlg = (0, react_1.lazy)(() => Promise.resolve().then(() => __importStar(require('../components/SetMinMaxDialog'))));
+const SetMinMaxDlg = (0, react_1.lazy)(() => Promise.resolve().then(() => __importStar(require('../../shared/SetMinMaxDialog'))));
 const SetColorDlg = (0, react_1.lazy)(() => Promise.resolve().then(() => __importStar(require('../components/SetColorDialog'))));
 // using a map because it preserves order
 const rendererTypes = new Map([
@@ -116,9 +116,8 @@ function stateModelFactory(pluginManager, configSchema) {
         }), {}),
     }))
         .volatile(() => ({
-        statsReady: false,
         message: undefined,
-        stats: { scoreMin: 0, scoreMax: 50 },
+        stats: undefined,
         statsFetchInProgress: undefined,
     }))
         .actions(self => ({
@@ -128,11 +127,13 @@ function stateModelFactory(pluginManager, configSchema) {
         updateStats(stats) {
             const { scoreMin, scoreMax } = stats;
             const EPSILON = 0.000001;
-            if (Math.abs(self.stats.scoreMax - scoreMax) > EPSILON ||
+            if (!self.stats) {
+                self.stats = { scoreMin, scoreMax };
+            }
+            else if (Math.abs(self.stats.scoreMax - scoreMax) > EPSILON ||
                 Math.abs(self.stats.scoreMin - scoreMin) > EPSILON) {
                 self.stats = { scoreMin, scoreMax };
             }
-            self.statsReady = true;
         },
         /**
          * #action
@@ -359,6 +360,9 @@ function stateModelFactory(pluginManager, configSchema) {
              */
             get domain() {
                 const { stats, scaleType, minScore, maxScore } = self;
+                if (!stats) {
+                    return undefined;
+                }
                 const ret = (0, util_2.getNiceDomain)({
                     domain: [stats.scoreMin, stats.scoreMax],
                     bounds: [minScore, maxScore],
@@ -424,6 +428,9 @@ function stateModelFactory(pluginManager, configSchema) {
             const minimalTicks = (0, configuration_1.getConf)(self, 'minimalTicks');
             const inverted = (0, configuration_1.getConf)(self, 'inverted');
             const range = [height - util_2.YSCALEBAR_LABEL_OFFSET, util_2.YSCALEBAR_LABEL_OFFSET];
+            if (!domain) {
+                return undefined;
+            }
             const scale = (0, util_2.getScale)({
                 scaleType,
                 domain,
@@ -454,7 +461,7 @@ function stateModelFactory(pluginManager, configSchema) {
                 const { filters, ticks, height, resolution, scaleOpts } = self;
                 return {
                     ...superProps,
-                    notReady: superProps.notReady || !self.statsReady,
+                    notReady: superProps.notReady || !self.stats,
                     rpcDriverName: self.rpcDriverName,
                     displayModel: self,
                     config: self.rendererConfig,
@@ -642,7 +649,7 @@ function stateModelFactory(pluginManager, configSchema) {
              * #action
              */
             async renderSvg(opts) {
-                await (0, mobx_1.when)(() => self.statsReady && !!self.regionCannotBeRenderedText);
+                await (0, mobx_1.when)(() => !!self.stats && !!self.regionCannotBeRenderedText);
                 const { needsScalebar, stats } = self;
                 const { offsetPx } = (0, util_1.getContainingView)(self);
                 return (react_1.default.createElement(react_1.default.Fragment, null,

package/dist/LinearWiggleDisplay/models/model.js.map CHANGED Viewed

	@@ -1 +1 @@
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package/dist/MultiLinearWiggleDisplay/components/DraggableDialog.d.ts ADDED Viewed

@@ -0,0 +1,7 @@
+/// <reference types="react" />
+import { DialogProps } from '@mui/material';
+declare function DraggableDialog(props: DialogProps & {
+    title: string;
+}): JSX.Element;
+declare const _default: typeof DraggableDialog;
+export default _default;

package/dist/MultiLinearWiggleDisplay/components/DraggableDialog.js ADDED Viewed

@@ -0,0 +1,43 @@
+"use strict";
+var __importDefault = (this && this.__importDefault) || function (mod) {
+    return (mod && mod.__esModule) ? mod : { "default": mod };
+};
+Object.defineProperty(exports, "__esModule", { value: true });
+const react_1 = __importDefault(require("react"));
+const material_1 = require("@mui/material");
+const mobx_react_1 = require("mobx-react");
+const mui_1 = require("tss-react/mui");
+const react_draggable_1 = __importDefault(require("react-draggable"));
+// icons
+const Close_1 = __importDefault(require("@mui/icons-material/Close"));
+const useStyles = (0, mui_1.makeStyles)()(theme => ({
+    closeButton: {
+        position: 'absolute',
+        right: theme.spacing(1),
+        top: theme.spacing(1),
+        color: theme.palette.grey[500],
+    },
+}));
+// draggable dialog demo https://mui.com/material-ui/react-dialog/#draggable-dialog
+function PaperComponent(props) {
+    return (react_1.default.createElement(react_draggable_1.default, { handle: "#draggable-dialog-title", cancel: '[class*="MuiDialogContent-root"]' },
+        react_1.default.createElement(material_1.Paper, { ...props })));
+}
+function DraggableDialog(props) {
+    const { classes } = useStyles();
+    const { title, children, onClose } = props;
+    return (react_1.default.createElement(material_1.Dialog, { ...props, PaperComponent: PaperComponent, "aria-labelledby": "draggable-dialog-title" // this area is important for the draggable functionality
+     },
+        react_1.default.createElement(material_1.ScopedCssBaseline, null,
+            react_1.default.createElement(material_1.DialogTitle, { style: { cursor: 'move' }, id: "draggable-dialog-title" },
+                title,
+                onClose ? (react_1.default.createElement(material_1.IconButton, { className: classes.closeButton, onClick: () => {
+                        // @ts-ignore
+                        onClose();
+                    } },
+                    react_1.default.createElement(Close_1.default, null))) : null),
+            react_1.default.createElement(material_1.Divider, null),
+            children)));
+}
+exports.default = (0, mobx_react_1.observer)(DraggableDialog);
+//# sourceMappingURL=DraggableDialog.js.map

package/dist/MultiLinearWiggleDisplay/components/DraggableDialog.js.map ADDED Viewed

@@ -0,0 +1 @@

+ {"version":3,"file":"DraggableDialog.js","sourceRoot":"","sources":["../../../src/MultiLinearWiggleDisplay/components/DraggableDialog.tsx"],"names":[],"mappings":";;;;;AAAA,kDAAyB;AACzB,4CASsB;AACtB,2CAAqC;AACrC,uCAA0C;AAC1C,sEAAuC;AAEvC,QAAQ;AACR,sEAAiD;AAEjD,MAAM,SAAS,GAAG,IAAA,gBAAU,GAAE,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;IACvC,WAAW,EAAE;QACX,QAAQ,EAAE,UAAU;QACpB,KAAK,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;QACvB,GAAG,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;QACrB,KAAK,EAAE,KAAK,CAAC,OAAO,CAAC,IAAI,CAAC,GAAG,CAAC;KAC/B;CACF,CAAC,CAAC,CAAA;AAEH,mFAAmF;AACnF,SAAS,cAAc,CAAC,KAAiB;IACvC,OAAO,CACL,8BAAC,yBAAS,IACR,MAAM,EAAC,yBAAyB,EAChC,MAAM,EAAE,kCAAkC;QAE1C,8BAAC,gBAAK,OAAK,KAAK,GAAI,CACV,CACb,CAAA;AACH,CAAC;AAED,SAAS,eAAe,CAAC,KAAsC;IAC7D,MAAM,EAAE,OAAO,EAAE,GAAG,SAAS,EAAE,CAAA;IAC/B,MAAM,EAAE,KAAK,EAAE,QAAQ,EAAE,OAAO,EAAE,GAAG,KAAK,CAAA;IAE1C,OAAO,CACL,8BAAC,iBAAM,OACD,KAAK,EACT,cAAc,EAAE,cAAc,qBACd,wBAAwB,CAAC,yDAAyD;;QAElG,8BAAC,4BAAiB;YAChB,8BAAC,sBAAW,IAAC,KAAK,EAAE,EAAE,MAAM,EAAE,MAAM,EAAE,EAAE,EAAE,EAAC,wBAAwB;gBAChE,KAAK;gBACL,OAAO,CAAC,CAAC,CAAC,CACT,8BAAC,qBAAU,IACT,SAAS,EAAE,OAAO,CAAC,WAAW,EAC9B,OAAO,EAAE,GAAG,EAAE;wBACZ,aAAa;wBACb,OAAO,EAAE,CAAA;oBACX,CAAC;oBAED,8BAAC,eAAS,OAAG,CACF,CACd,CAAC,CAAC,CAAC,IAAI,CACI;YACd,8BAAC,kBAAO,OAAG;YACV,QAAQ,CACS,CACb,CACV,CAAA;AACH,CAAC;AACD,kBAAe,IAAA,qBAAQ,EAAC,eAAe,CAAC,CAAA"}

package/dist/MultiLinearWiggleDisplay/components/SetColorDialog.js CHANGED Viewed

@@ -31,46 +31,28 @@ const material_1 = require("@mui/material");
 const mui_1 = require("tss-react/mui");
 const util_1 = require("@jbrowse/core/util");
 const x_data_grid_1 = require("@mui/x-data-grid");
-const react_draggable_1 = __importDefault(require("react-draggable"));
 const clone_1 = __importDefault(require("clone"));
 // locals
+const DraggableDialog_1 = __importDefault(require("./DraggableDialog"));
 const ColorPicker_1 = __importStar(require("@jbrowse/core/ui/ColorPicker"));
 const BaseFeatureDetail_1 = require("@jbrowse/core/BaseFeatureWidget/BaseFeatureDetail");
 const util_2 = require("./util");
 // icons
-const Close_1 = __importDefault(require("@mui/icons-material/Close"));
 const KeyboardDoubleArrowUp_1 = __importDefault(require("@mui/icons-material/KeyboardDoubleArrowUp"));
 const KeyboardDoubleArrowDown_1 = __importDefault(require("@mui/icons-material/KeyboardDoubleArrowDown"));
 const KeyboardArrowDown_1 = __importDefault(require("@mui/icons-material/KeyboardArrowDown"));
 const KeyboardArrowUp_1 = __importDefault(require("@mui/icons-material/KeyboardArrowUp"));
-const useStyles = (0, mui_1.makeStyles)()(theme => ({
-    closeButton: {
-        position: 'absolute',
-        right: theme.spacing(1),
-        top: theme.spacing(1),
-        color: theme.palette.grey[500],
-    },
+const useStyles = (0, mui_1.makeStyles)()({
     content: {
         minWidth: 800,
     },
-}));
-// draggable dialog demo https://mui.com/material-ui/react-dialog/#draggable-dialog
-function PaperComponent(props) {
-    return (react_1.default.createElement(react_draggable_1.default, { handle: "#draggable-dialog-title", cancel: '[class*="MuiDialogContent-root"]' },
-        react_1.default.createElement(material_1.Paper, { ...props })));
-}
+});
 function SetColorDialog({ model, handleClose, }) {
     const { classes } = useStyles();
     const { sources } = model;
     const [currLayout, setCurrLayout] = (0, react_1.useState)((0, clone_1.default)(sources || []));
     const [showTips, setShowTips] = (0, util_1.useLocalStorage)('multiwiggle-showTips', true);
-    return (react_1.default.createElement(material_1.Dialog, { PaperComponent: PaperComponent, open: true, onClose: handleClose, maxWidth: "xl", "aria-labelledby": "draggable-dialog-title" // this area is important for the draggable functionality
-     },
-        react_1.default.createElement(material_1.DialogTitle, { style: { cursor: 'move' }, id: "draggable-dialog-title" },
-            "Multi-wiggle color/arrangement editor",
-            ' ',
-            react_1.default.createElement(material_1.IconButton, { className: classes.closeButton, onClick: handleClose },
-                react_1.default.createElement(Close_1.default, null))),
+    return (react_1.default.createElement(DraggableDialog_1.default, { open: true, onClose: handleClose, maxWidth: "xl", title: 'Multi-wiggle color/arrangement editor' },
         react_1.default.createElement(material_1.DialogContent, { className: classes.content },
             react_1.default.createElement(material_1.Button, { variant: "contained", style: { float: 'right' }, onClick: () => setShowTips(!showTips) }, showTips ? 'Hide tips' : 'Show tips'),
             react_1.default.createElement("br", null),

package/dist/MultiLinearWiggleDisplay/components/SetColorDialog.js.map CHANGED Viewed

	@@ -1 +1 @@
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1	+ 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package/dist/MultiLinearWiggleDisplay/components/WiggleDisplayComponent.js CHANGED Viewed

@@ -44,7 +44,7 @@ const RectBg = (props) => {
 const ScoreLegend = (0, mobx_react_1.observer)(({ model }) => {
     const { ticks, scaleType } = model;
     const { width } = (0, util_1.getContainingView)(model);
-    const legend = `[${ticks.values[0]}-${ticks.values[1]}]` +
+    const legend = `[${ticks === null || ticks === void 0 ? void 0 : ticks.values[0]}-${ticks === null || ticks === void 0 ? void 0 : ticks.values[1]}]` +
         (scaleType === 'log' ? ' (log scale)' : '');
     const len = (0, util_1.measureText)(legend, 14);
     const padding = 25;

package/dist/MultiLinearWiggleDisplay/components/WiggleDisplayComponent.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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1	+ 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package/dist/MultiLinearWiggleDisplay/index.js CHANGED Viewed

@@ -12,6 +12,7 @@ exports.default = (pluginManager) => {
         const configSchema = (0, configSchema_1.default)(pluginManager);
         return new DisplayType_1.default({
             name: 'MultiLinearWiggleDisplay',
+            displayName: 'Multi-wiggle display',
             configSchema,
             stateModel: (0, model_1.default)(pluginManager, configSchema),
             trackType: 'MultiQuantitativeTrack',

package/dist/MultiLinearWiggleDisplay/index.js.map CHANGED Viewed

	@@ -1 +1 @@
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