@jbrowse/plugin-linear-genome-view 2.2.1 → 2.3.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/BaseLinearDisplay/components/BaseLinearDisplay.d.ts +2 -1
- package/dist/BaseLinearDisplay/components/BaseLinearDisplay.js +4 -2
- package/dist/BaseLinearDisplay/components/BaseLinearDisplay.js.map +1 -1
- package/dist/BaseLinearDisplay/components/Block.d.ts +1 -1
- package/dist/BaseLinearDisplay/components/Block.js +1 -1
- package/dist/BaseLinearDisplay/components/Block.js.map +1 -1
- package/dist/BaseLinearDisplay/components/BlockMsg.js +3 -2
- package/dist/BaseLinearDisplay/components/BlockMsg.js.map +1 -1
- package/dist/BaseLinearDisplay/components/LinearBlocks.d.ts +1 -1
- package/dist/BaseLinearDisplay/components/LinearBlocks.js +2 -2
- package/dist/BaseLinearDisplay/components/LinearBlocks.js.map +1 -1
- package/dist/BaseLinearDisplay/{models → components}/TooLargeMessage.d.ts +0 -0
- package/dist/BaseLinearDisplay/{models → components}/TooLargeMessage.js +0 -0
- package/dist/BaseLinearDisplay/components/TooLargeMessage.js.map +1 -0
- package/dist/BaseLinearDisplay/index.d.ts +2 -2
- package/dist/BaseLinearDisplay/index.js +4 -3
- package/dist/BaseLinearDisplay/index.js.map +1 -1
- package/dist/BaseLinearDisplay/models/BaseLinearDisplayModel.d.ts +6 -14
- package/dist/BaseLinearDisplay/models/BaseLinearDisplayModel.js +3 -5
- package/dist/BaseLinearDisplay/models/BaseLinearDisplayModel.js.map +1 -1
- package/dist/BaseLinearDisplay/models/configSchema.d.ts +2 -0
- package/dist/BaseLinearDisplay/models/{baseLinearDisplayConfigSchema.js → configSchema.js} +5 -5
- package/dist/BaseLinearDisplay/models/configSchema.js.map +1 -0
- package/dist/BaseLinearDisplay/models/serverSideRenderedBlock.js +1 -1
- package/dist/BaseLinearDisplay/models/serverSideRenderedBlock.js.map +1 -1
- package/dist/BaseLinearDisplay/models/util.d.ts +18 -0
- package/dist/BaseLinearDisplay/models/util.js +18 -0
- package/dist/BaseLinearDisplay/models/util.js.map +1 -0
- package/dist/FeatureTrack/index.d.ts +1 -1
- package/dist/FeatureTrack/index.js +5 -4
- package/dist/FeatureTrack/index.js.map +1 -1
- package/dist/LaunchLinearGenomeView/index.d.ts +3 -0
- package/dist/LaunchLinearGenomeView/index.js +44 -0
- package/dist/LaunchLinearGenomeView/index.js.map +1 -0
- package/dist/LinearBareDisplay/index.d.ts +6 -2
- package/dist/LinearBareDisplay/index.js +18 -2
- package/dist/LinearBareDisplay/index.js.map +1 -1
- package/dist/LinearBareDisplay/model.d.ts +1 -1
- package/dist/LinearBasicDisplay/components/SetMaxHeight.js +2 -15
- package/dist/LinearBasicDisplay/components/SetMaxHeight.js.map +1 -1
- package/dist/LinearBasicDisplay/index.d.ts +6 -2
- package/dist/LinearBasicDisplay/index.js +21 -4
- package/dist/LinearBasicDisplay/index.js.map +1 -1
- package/dist/LinearBasicDisplay/model.d.ts +17 -13
- package/dist/LinearBasicDisplay/model.js +2 -1
- package/dist/LinearBasicDisplay/model.js.map +1 -1
- package/dist/LinearGenomeView/components/ExportSvgDialog.js +1 -19
- package/dist/LinearGenomeView/components/ExportSvgDialog.js.map +1 -1
- package/dist/LinearGenomeView/components/GetSequenceDialog.js +7 -18
- package/dist/LinearGenomeView/components/GetSequenceDialog.js.map +1 -1
- package/dist/LinearGenomeView/components/Header.js +2 -2
- package/dist/LinearGenomeView/components/HelpDialog.js +2 -17
- package/dist/LinearGenomeView/components/HelpDialog.js.map +1 -1
- package/dist/LinearGenomeView/components/ImportForm.js +15 -10
- package/dist/LinearGenomeView/components/ImportForm.js.map +1 -1
- package/dist/LinearGenomeView/components/LinearGenomeViewSvg.js +6 -7
- package/dist/LinearGenomeView/components/LinearGenomeViewSvg.js.map +1 -1
- package/{esm/LinearGenomeView/components/OverviewRubberBand.d.ts → dist/LinearGenomeView/components/OverviewRubberband.d.ts} +2 -2
- package/dist/LinearGenomeView/components/{OverviewRubberBand.js → OverviewRubberband.js} +27 -79
- package/dist/LinearGenomeView/components/OverviewRubberband.js.map +1 -0
- package/dist/LinearGenomeView/components/{OverviewScaleBar.d.ts → OverviewScalebar.d.ts} +2 -2
- package/dist/LinearGenomeView/components/{OverviewScaleBar.js → OverviewScalebar.js} +25 -24
- package/dist/LinearGenomeView/components/OverviewScalebar.js.map +1 -0
- package/dist/LinearGenomeView/components/RefNameAutocomplete.js +1 -1
- package/dist/LinearGenomeView/components/RefNameAutocomplete.js.map +1 -1
- package/dist/LinearGenomeView/components/{RubberBand.d.ts → Rubberband.d.ts} +2 -2
- package/dist/LinearGenomeView/components/Rubberband.js +57 -0
- package/dist/LinearGenomeView/components/Rubberband.js.map +1 -0
- package/dist/LinearGenomeView/components/RubberbandSpan.d.ts +14 -0
- package/dist/LinearGenomeView/components/RubberbandSpan.js +90 -0
- package/dist/LinearGenomeView/components/RubberbandSpan.js.map +1 -0
- package/dist/LinearGenomeView/components/Ruler.d.ts +2 -18
- package/dist/LinearGenomeView/components/Ruler.js +9 -25
- package/dist/LinearGenomeView/components/Ruler.js.map +1 -1
- package/dist/LinearGenomeView/components/{ScaleBar.d.ts → Scalebar.d.ts} +2 -2
- package/dist/LinearGenomeView/components/{ScaleBar.js → Scalebar.js} +11 -11
- package/dist/LinearGenomeView/components/{ScaleBar.js.map → Scalebar.js.map} +1 -1
- package/dist/LinearGenomeView/components/SearchBox.js +10 -6
- package/dist/LinearGenomeView/components/SearchBox.js.map +1 -1
- package/dist/LinearGenomeView/components/SearchResultsDialog.js +17 -31
- package/dist/LinearGenomeView/components/SearchResultsDialog.js.map +1 -1
- package/dist/LinearGenomeView/components/SequenceSearchDialog.js +4 -19
- package/dist/LinearGenomeView/components/SequenceSearchDialog.js.map +1 -1
- package/dist/LinearGenomeView/components/TrackContainer.js +2 -2
- package/dist/LinearGenomeView/components/TrackContainer.js.map +1 -1
- package/dist/LinearGenomeView/components/TracksContainer.js +21 -118
- package/dist/LinearGenomeView/components/TracksContainer.js.map +1 -1
- package/dist/LinearGenomeView/components/VerticalGuide.d.ts +9 -0
- package/dist/LinearGenomeView/components/VerticalGuide.js +29 -0
- package/dist/LinearGenomeView/components/VerticalGuide.js.map +1 -0
- package/dist/LinearGenomeView/components/hooks.d.ts +65 -0
- package/dist/LinearGenomeView/components/hooks.js +264 -0
- package/dist/LinearGenomeView/components/hooks.js.map +1 -0
- package/dist/LinearGenomeView/components/util.d.ts +5 -2
- package/dist/LinearGenomeView/components/util.js +7 -6
- package/dist/LinearGenomeView/components/util.js.map +1 -1
- package/dist/LinearGenomeView/index.d.ts +3 -534
- package/dist/LinearGenomeView/index.js +12 -1327
- package/dist/LinearGenomeView/index.js.map +1 -1
- package/dist/LinearGenomeView/model.d.ts +535 -0
- package/dist/LinearGenomeView/model.js +1357 -0
- package/dist/LinearGenomeView/model.js.map +1 -0
- package/dist/index.d.ts +6 -6
- package/dist/index.js +12 -73
- package/dist/index.js.map +1 -1
- package/esm/BaseLinearDisplay/components/BaseLinearDisplay.d.ts +2 -1
- package/esm/BaseLinearDisplay/components/BaseLinearDisplay.js +3 -2
- package/esm/BaseLinearDisplay/components/BaseLinearDisplay.js.map +1 -1
- package/esm/BaseLinearDisplay/components/Block.d.ts +1 -1
- package/esm/BaseLinearDisplay/components/Block.js +1 -1
- package/esm/BaseLinearDisplay/components/Block.js.map +1 -1
- package/esm/BaseLinearDisplay/components/BlockMsg.js +3 -2
- package/esm/BaseLinearDisplay/components/BlockMsg.js.map +1 -1
- package/esm/BaseLinearDisplay/components/LinearBlocks.d.ts +1 -1
- package/esm/BaseLinearDisplay/components/LinearBlocks.js +2 -2
- package/esm/BaseLinearDisplay/components/LinearBlocks.js.map +1 -1
- package/esm/BaseLinearDisplay/{models → components}/TooLargeMessage.d.ts +0 -0
- package/esm/BaseLinearDisplay/{models → components}/TooLargeMessage.js +0 -0
- package/esm/BaseLinearDisplay/components/TooLargeMessage.js.map +1 -0
- package/esm/BaseLinearDisplay/index.d.ts +2 -2
- package/esm/BaseLinearDisplay/index.js +2 -2
- package/esm/BaseLinearDisplay/index.js.map +1 -1
- package/esm/BaseLinearDisplay/models/BaseLinearDisplayModel.d.ts +6 -14
- package/esm/BaseLinearDisplay/models/BaseLinearDisplayModel.js +3 -5
- package/esm/BaseLinearDisplay/models/BaseLinearDisplayModel.js.map +1 -1
- package/esm/BaseLinearDisplay/models/configSchema.d.ts +2 -0
- package/esm/BaseLinearDisplay/models/{baseLinearDisplayConfigSchema.js → configSchema.js} +5 -4
- package/esm/BaseLinearDisplay/models/configSchema.js.map +1 -0
- package/esm/BaseLinearDisplay/models/serverSideRenderedBlock.js +1 -1
- package/esm/BaseLinearDisplay/models/serverSideRenderedBlock.js.map +1 -1
- package/esm/BaseLinearDisplay/models/util.d.ts +18 -0
- package/esm/BaseLinearDisplay/models/util.js +14 -0
- package/esm/BaseLinearDisplay/models/util.js.map +1 -0
- package/esm/FeatureTrack/index.d.ts +1 -1
- package/esm/FeatureTrack/index.js +5 -4
- package/esm/FeatureTrack/index.js.map +1 -1
- package/esm/LaunchLinearGenomeView/index.d.ts +3 -0
- package/esm/LaunchLinearGenomeView/index.js +42 -0
- package/esm/LaunchLinearGenomeView/index.js.map +1 -0
- package/esm/LinearBareDisplay/index.d.ts +6 -2
- package/esm/LinearBareDisplay/index.js +19 -2
- package/esm/LinearBareDisplay/index.js.map +1 -1
- package/esm/LinearBareDisplay/model.d.ts +1 -1
- package/esm/LinearBasicDisplay/components/SetMaxHeight.js +3 -13
- package/esm/LinearBasicDisplay/components/SetMaxHeight.js.map +1 -1
- package/esm/LinearBasicDisplay/index.d.ts +6 -2
- package/esm/LinearBasicDisplay/index.js +20 -2
- package/esm/LinearBasicDisplay/index.js.map +1 -1
- package/esm/LinearBasicDisplay/model.d.ts +17 -13
- package/esm/LinearBasicDisplay/model.js +2 -1
- package/esm/LinearBasicDisplay/model.js.map +1 -1
- package/esm/LinearGenomeView/components/ExportSvgDialog.js +3 -18
- package/esm/LinearGenomeView/components/ExportSvgDialog.js.map +1 -1
- package/esm/LinearGenomeView/components/GetSequenceDialog.js +8 -19
- package/esm/LinearGenomeView/components/GetSequenceDialog.js.map +1 -1
- package/esm/LinearGenomeView/components/Header.js +2 -2
- package/esm/LinearGenomeView/components/HelpDialog.js +3 -18
- package/esm/LinearGenomeView/components/HelpDialog.js.map +1 -1
- package/esm/LinearGenomeView/components/ImportForm.js +15 -10
- package/esm/LinearGenomeView/components/ImportForm.js.map +1 -1
- package/esm/LinearGenomeView/components/LinearGenomeViewSvg.js +4 -5
- package/esm/LinearGenomeView/components/LinearGenomeViewSvg.js.map +1 -1
- package/{dist/LinearGenomeView/components/OverviewRubberBand.d.ts → esm/LinearGenomeView/components/OverviewRubberband.d.ts} +2 -2
- package/esm/LinearGenomeView/components/{OverviewRubberBand.js → OverviewRubberband.js} +25 -80
- package/esm/LinearGenomeView/components/OverviewRubberband.js.map +1 -0
- package/esm/LinearGenomeView/components/{OverviewScaleBar.d.ts → OverviewScalebar.d.ts} +2 -2
- package/esm/LinearGenomeView/components/{OverviewScaleBar.js → OverviewScalebar.js} +25 -24
- package/esm/LinearGenomeView/components/OverviewScalebar.js.map +1 -0
- package/esm/LinearGenomeView/components/RefNameAutocomplete.js +1 -1
- package/esm/LinearGenomeView/components/RefNameAutocomplete.js.map +1 -1
- package/esm/LinearGenomeView/components/{RubberBand.d.ts → Rubberband.d.ts} +2 -2
- package/esm/LinearGenomeView/components/Rubberband.js +29 -0
- package/esm/LinearGenomeView/components/Rubberband.js.map +1 -0
- package/esm/LinearGenomeView/components/RubberbandSpan.d.ts +14 -0
- package/esm/LinearGenomeView/components/RubberbandSpan.js +65 -0
- package/esm/LinearGenomeView/components/RubberbandSpan.js.map +1 -0
- package/esm/LinearGenomeView/components/Ruler.d.ts +2 -18
- package/esm/LinearGenomeView/components/Ruler.js +6 -22
- package/esm/LinearGenomeView/components/Ruler.js.map +1 -1
- package/esm/LinearGenomeView/components/{ScaleBar.d.ts → Scalebar.d.ts} +2 -2
- package/esm/LinearGenomeView/components/{ScaleBar.js → Scalebar.js} +11 -11
- package/esm/LinearGenomeView/components/{ScaleBar.js.map → Scalebar.js.map} +1 -1
- package/esm/LinearGenomeView/components/SearchBox.js +10 -6
- package/esm/LinearGenomeView/components/SearchBox.js.map +1 -1
- package/esm/LinearGenomeView/components/SearchResultsDialog.js +18 -32
- package/esm/LinearGenomeView/components/SearchResultsDialog.js.map +1 -1
- package/esm/LinearGenomeView/components/SequenceSearchDialog.js +5 -17
- package/esm/LinearGenomeView/components/SequenceSearchDialog.js.map +1 -1
- package/esm/LinearGenomeView/components/TrackContainer.js +2 -2
- package/esm/LinearGenomeView/components/TrackContainer.js.map +1 -1
- package/esm/LinearGenomeView/components/TracksContainer.js +22 -119
- package/esm/LinearGenomeView/components/TracksContainer.js.map +1 -1
- package/esm/LinearGenomeView/components/VerticalGuide.d.ts +9 -0
- package/esm/LinearGenomeView/components/VerticalGuide.js +24 -0
- package/esm/LinearGenomeView/components/VerticalGuide.js.map +1 -0
- package/esm/LinearGenomeView/components/hooks.d.ts +65 -0
- package/esm/LinearGenomeView/components/hooks.js +255 -0
- package/esm/LinearGenomeView/components/hooks.js.map +1 -0
- package/esm/LinearGenomeView/components/util.d.ts +5 -2
- package/esm/LinearGenomeView/components/util.js +4 -3
- package/esm/LinearGenomeView/components/util.js.map +1 -1
- package/esm/LinearGenomeView/index.d.ts +3 -534
- package/esm/LinearGenomeView/index.js +10 -1318
- package/esm/LinearGenomeView/index.js.map +1 -1
- package/esm/LinearGenomeView/model.d.ts +535 -0
- package/esm/LinearGenomeView/model.js +1322 -0
- package/esm/LinearGenomeView/model.js.map +1 -0
- package/esm/index.d.ts +6 -6
- package/esm/index.js +12 -74
- package/esm/index.js.map +1 -1
- package/package.json +5 -6
- package/src/BaseLinearDisplay/components/BaseLinearDisplay.tsx +86 -84
- package/src/BaseLinearDisplay/components/Block.tsx +15 -11
- package/src/BaseLinearDisplay/components/BlockMsg.tsx +9 -9
- package/src/BaseLinearDisplay/components/LinearBlocks.tsx +62 -58
- package/src/BaseLinearDisplay/{models → components}/TooLargeMessage.tsx +0 -0
- package/src/BaseLinearDisplay/index.ts +2 -1
- package/src/BaseLinearDisplay/models/BaseLinearDisplayModel.tsx +4 -3
- package/src/BaseLinearDisplay/models/{baseLinearDisplayConfigSchema.ts → configSchema.ts} +5 -3
- package/src/BaseLinearDisplay/models/serverSideRenderedBlock.ts +1 -1
- package/src/BaseLinearDisplay/models/util.ts +24 -0
- package/src/FeatureTrack/index.ts +5 -8
- package/src/LaunchLinearGenomeView/index.ts +66 -0
- package/src/LinearBareDisplay/index.ts +23 -2
- package/src/LinearBasicDisplay/components/SetMaxHeight.tsx +3 -28
- package/src/LinearBasicDisplay/index.ts +24 -2
- package/src/LinearBasicDisplay/model.ts +2 -1
- package/src/LinearGenomeView/README.md +2 -1
- package/src/LinearGenomeView/components/ExportSvgDialog.tsx +2 -23
- package/src/LinearGenomeView/components/GetSequenceDialog.tsx +13 -31
- package/src/LinearGenomeView/components/Header.tsx +3 -3
- package/src/LinearGenomeView/components/HelpDialog.tsx +8 -34
- package/src/LinearGenomeView/components/ImportForm.tsx +13 -9
- package/src/LinearGenomeView/components/LinearGenomeView.test.tsx +132 -134
- package/src/LinearGenomeView/components/LinearGenomeViewSvg.tsx +4 -5
- package/src/LinearGenomeView/components/{OverviewRubberBand.tsx → OverviewRubberband.tsx} +32 -114
- package/src/LinearGenomeView/components/{OverviewScaleBar.tsx → OverviewScalebar.tsx} +26 -25
- package/src/LinearGenomeView/components/RefNameAutocomplete.tsx +2 -1
- package/src/LinearGenomeView/components/Rubberband.tsx +89 -0
- package/src/LinearGenomeView/components/RubberbandSpan.tsx +116 -0
- package/src/LinearGenomeView/components/Ruler.tsx +11 -28
- package/src/LinearGenomeView/components/{ScaleBar.test.tsx → Scalebar.test.tsx} +5 -5
- package/src/LinearGenomeView/components/{ScaleBar.tsx → Scalebar.tsx} +11 -11
- package/src/LinearGenomeView/components/SearchBox.tsx +8 -6
- package/src/LinearGenomeView/components/SearchResultsDialog.tsx +17 -44
- package/src/LinearGenomeView/components/SequenceSearchDialog.tsx +4 -30
- package/src/LinearGenomeView/components/TrackContainer.tsx +4 -2
- package/src/LinearGenomeView/components/TracksContainer.tsx +59 -136
- package/src/LinearGenomeView/components/VerticalGuide.tsx +37 -0
- package/src/LinearGenomeView/components/__snapshots__/LinearGenomeView.test.tsx.snap +39 -44
- package/src/LinearGenomeView/components/hooks.ts +300 -0
- package/src/LinearGenomeView/components/util.ts +8 -11
- package/src/LinearGenomeView/index.test.ts +6 -7
- package/src/LinearGenomeView/index.ts +18 -0
- package/src/LinearGenomeView/{index.tsx → model.ts} +7 -4
- package/src/index.ts +16 -108
- package/dist/BaseLinearDisplay/models/TooLargeMessage.js.map +0 -1
- package/dist/BaseLinearDisplay/models/baseLinearDisplayConfigSchema.d.ts +0 -1
- package/dist/BaseLinearDisplay/models/baseLinearDisplayConfigSchema.js.map +0 -1
- package/dist/LinearGenomeView/components/OverviewRubberBand.js.map +0 -1
- package/dist/LinearGenomeView/components/OverviewScaleBar.js.map +0 -1
- package/dist/LinearGenomeView/components/RubberBand.js +0 -221
- package/dist/LinearGenomeView/components/RubberBand.js.map +0 -1
- package/esm/BaseLinearDisplay/models/TooLargeMessage.js.map +0 -1
- package/esm/BaseLinearDisplay/models/baseLinearDisplayConfigSchema.d.ts +0 -1
- package/esm/BaseLinearDisplay/models/baseLinearDisplayConfigSchema.js.map +0 -1
- package/esm/LinearGenomeView/components/OverviewRubberBand.js.map +0 -1
- package/esm/LinearGenomeView/components/OverviewScaleBar.js.map +0 -1
- package/esm/LinearGenomeView/components/RubberBand.js +0 -196
- package/esm/LinearGenomeView/components/RubberBand.js.map +0 -1
- package/src/LinearGenomeView/components/RubberBand.tsx +0 -308
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{"version":3,"file":"GetSequenceDialog.js","sourceRoot":"","sources":["../../../src/LinearGenomeView/components/GetSequenceDialog.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,SAAS,EAAE,OAAO,EAAE,QAAQ,EAAE,MAAM,OAAO,CAAA;AAC3D,OAAO,EAAE,UAAU,EAAE,MAAM,eAAe,CAAA;AAC1C,OAAO,EACL,MAAM,EACN,gBAAgB,EAChB,SAAS,EACT,
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1
|
+
{"version":3,"file":"GetSequenceDialog.js","sourceRoot":"","sources":["../../../src/LinearGenomeView/components/GetSequenceDialog.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,SAAS,EAAE,OAAO,EAAE,QAAQ,EAAE,MAAM,OAAO,CAAA;AAC3D,OAAO,EAAE,UAAU,EAAE,MAAM,eAAe,CAAA;AAC1C,OAAO,EACL,MAAM,EACN,gBAAgB,EAChB,SAAS,EACT,aAAa,EACb,aAAa,EACb,SAAS,EACT,UAAU,GACX,MAAM,eAAe,CAAA;AACtB,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AACrC,OAAO,EAAE,MAAM,EAAE,MAAM,YAAY,CAAA;AACnC,OAAO,EAAE,OAAO,EAAE,MAAM,6BAA6B,CAAA;AACrD,OAAO,IAAI,MAAM,mBAAmB,CAAA;AACpC,OAAO,EAAE,MAAM,EAAE,MAAM,kBAAkB,CAAA;AACzC,OAAO,EAAE,UAAU,EAAmB,MAAM,oBAAoB,CAAA;AAChE,OAAO,EAAE,cAAc,EAAE,MAAM,uCAAuC,CAAA;AAEtE,QAAQ;AACR,OAAO,EAAE,WAAW,IAAI,eAAe,EAAE,MAAM,wBAAwB,CAAA;AACvE,OAAO,UAAU,MAAM,4BAA4B,CAAA;AAKnD,MAAM,SAAS,GAAG,UAAU,EAAE,CAAC;IAC7B,aAAa,EAAE;QACb,KAAK,EAAE,MAAM;KACd;IACD,YAAY,EAAE;QACZ,UAAU,EAAE,aAAa;KAC1B;CACF,CAAC,CAAA;AAIF;;GAEG;AACH,KAAK,UAAU,aAAa,CAC1B,KAAU,EACV,OAAiB,EACjB,MAAoB;IAEpB,MAAM,OAAO,GAAG,UAAU,CAAC,KAAK,CAAC,CAAA;IACjC,MAAM,EAAE,UAAU,EAAE,WAAW,EAAE,GAAG,KAAK,CAAA;IAEzC,IAAI,CAAC,UAAU,IAAI,CAAC,WAAW,EAAE;QAC/B,MAAM,IAAI,KAAK,CAAC,sCAAsC,CAAC,CAAA;KACxD;IAED,IAAI,UAAU,CAAC,YAAY,KAAK,WAAW,CAAC,YAAY,EAAE;QACxD,MAAM,IAAI,KAAK,CAAC,sDAAsD,CAAC,CAAA;KACxE;IACD,MAAM,EAAE,UAAU,EAAE,eAAe,EAAE,GAAG,OAAO,CAAA;IAC/C,MAAM,YAAY,GAAG,UAAU,CAAC,YAAY,IAAI,WAAW,CAAC,YAAY,IAAI,EAAE,CAAA;IAC9E,MAAM,QAAQ,GAAG,eAAe,CAAC,GAAG,CAAC,YAAY,CAAC,CAAA;IAClD,IAAI,CAAC,QAAQ,EAAE;QACb,MAAM,IAAI,KAAK,CAAC,YAAY,YAAY,YAAY,CAAC,CAAA;KACtD;IACD,MAAM,aAAa,GAAG,OAAO,CAAC,QAAQ,EAAE,CAAC,UAAU,EAAE,SAAS,CAAC,CAAC,CAAA;IAEhE,MAAM,SAAS,GAAG,aAAa,CAAA;IAC/B,OAAO,UAAU,CAAC,IAAI,CAAC,SAAS,EAAE,iBAAiB,EAAE;QACnD,aAAa;QACb,OAAO;QACP,SAAS;QACT,MAAM;KACP,CAAuB,CAAA;AAC1B,CAAC;AAED,SAAS,cAAc,CAAC,EACtB,KAAK,EACL,WAAW,GAIZ;IACC,MAAM,EAAE,OAAO,EAAE,GAAG,SAAS,EAAE,CAAA;IAC/B,MAAM,OAAO,GAAG,UAAU,CAAC,KAAK,CAAC,CAAA;IACjC,MAAM,CAAC,KAAK,EAAE,QAAQ,CAAC,GAAG,QAAQ,EAAW,CAAA;IAC7C,MAAM,CAAC,QAAQ,EAAE,WAAW,CAAC,GAAG,QAAQ,EAAU,CAAA;IAClD,MAAM,OAAO,GAAG,OAAO,CAAC,QAAQ,KAAK,SAAS,CAAC,CAAA;IAC/C,MAAM,EAAE,UAAU,EAAE,WAAW,EAAE,GAAG,KAAK,CAAA;IAEzC,sCAAsC;IACtC,0EAA0E;IAC1E,yEAAyE;IACzE,MAAM,eAAe,GAAG,OAAO,CAC7B,GAAG,EAAE,CAAC,KAAK,CAAC,kBAAkB,CAAC,UAAU,EAAE,WAAW,CAAC,EACvD,CAAC,KAAK,EAAE,UAAU,EAAE,WAAW,CAAC,CACjC,CAAA;IAED,SAAS,CAAC,GAAG,EAAE;QACb,IAAI,MAAM,GAAG,IAAI,CAAA;QACjB,MAAM,UAAU,GAAG,IAAI,eAAe,EAAE,CAGvC;QAAA,CAAC,KAAK,IAAI,EAAE;YACX,IAAI;gBACF,IAAI,eAAe,CAAC,MAAM,GAAG,CAAC,EAAE;oBAC9B,MAAM,MAAM,GAAG,MAAM,aAAa,CAChC,KAAK,EACL,eAAe,EACf,UAAU,CAAC,MAAM,CAClB,CAAA;oBACD,IAAI,MAAM,EAAE;wBACV,WAAW,CACT,cAAc,CACZ,MAAM;6BACH,MAAM,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC;6BAChB,GAAG,CAAC,KAAK,CAAC,EAAE;4BACX,MAAM,QAAQ,GAAG,KAAK,CAAC,GAAG,CAAC,KAAK,CAAC,CAAA;4BACjC,MAAM,YAAY,GAAG,KAAK,CAAC,GAAG,CAAC,SAAS,CAAC,CAAA;4BACzC,MAAM,UAAU,GAAG,KAAK,CAAC,GAAG,CAAC,OAAO,CAAC,GAAG,CAAC,CAAA;4BACzC,MAAM,QAAQ,GAAG,KAAK,CAAC,GAAG,CAAC,KAAK,CAAC,CAAA;4BACjC,MAAM,cAAc,GAAG,GAAG,YAAY,IAAI,UAAU,IAAI,QAAQ,EAAE,CAAA;4BAClE,IAAI,CAAA,QAAQ,aAAR,QAAQ,uBAAR,QAAQ,CAAE,MAAM,MAAK,QAAQ,GAAG,UAAU,GAAG,CAAC,EAAE;gCAClD,MAAM,IAAI,KAAK,CACb,GAAG,cAAc,aAAa,QAAQ,CAAC,MAAM,CAAC,cAAc,EAAE,oCAAoC,CAChG,QAAQ,GAAG,UAAU,CACtB,CAAC,cAAc,EAAE,EAAE,CACrB,CAAA;6BACF;4BACD,OAAO,EAAE,MAAM,EAAE,cAAc,EAAE,GAAG,EAAE,QAAQ,EAAE,CAAA;wBAClD,CAAC,CAAC,CACL,CACF,CAAA;qBACF;iBACF;qBAAM;oBACL,MAAM,IAAI,KAAK,CAAC,kCAAkC,CAAC,CAAA;iBACpD;aACF;YAAC,OAAO,CAAC,EAAE;gBACV,OAAO,CAAC,KAAK,CAAC,CAAC,CAAC,CAAA;gBAChB,IAAI,MAAM,EAAE;oBACV,QAAQ,CAAC,CAAC,CAAC,CAAA;iBACZ;aACF;QACH,CAAC,CAAC,EAAE,CAAA;QAEJ,OAAO,GAAG,EAAE;YACV,UAAU,CAAC,KAAK,EAAE,CAAA;YAClB,MAAM,GAAG,KAAK,CAAA;QAChB,CAAC,CAAA;IACH,CAAC,EAAE,CAAC,KAAK,EAAE,OAAO,EAAE,eAAe,EAAE,WAAW,CAAC,CAAC,CAAA;IAElD,MAAM,gBAAgB,GAAG,QAAQ,CAAC,CAAC,CAAC,QAAQ,CAAC,MAAM,GAAG,OAAS,CAAC,CAAC,CAAC,KAAK,CAAA;IAEvE,OAAO,CACL,oBAAC,MAAM,IACL,QAAQ,EAAC,IAAI,EACb,IAAI,QACJ,OAAO,EAAE,GAAG,EAAE;YACZ,WAAW,EAAE,CAAA;YACb,KAAK,CAAC,UAAU,CAAC,SAAS,EAAE,SAAS,CAAC,CAAA;QACxC,CAAC,EACD,KAAK,EAAC,oBAAoB;QAE1B,oBAAC,aAAa;YACX,KAAK,CAAC,CAAC,CAAC,oBAAC,UAAU,IAAC,KAAK,EAAC,OAAO,IAAE,GAAG,KAAK,EAAE,CAAc,CAAC,CAAC,CAAC,IAAI;YAClE,OAAO,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC,CACnB,oBAAC,SAAS;;gBAER,oBAAC,gBAAgB,IACf,KAAK,EAAE;wBACL,UAAU,EAAE,EAAE;qBACf,EACD,IAAI,EAAE,EAAE,EACR,aAAa,SACb,CACQ,CACb,CAAC,CAAC,CAAC,IAAI;YACR,oBAAC,SAAS,mBACI,qBAAqB,EACjC,OAAO,EAAC,UAAU,EAClB,SAAS,QACT,OAAO,EAAE,CAAC,EACV,QAAQ,EAAE,gBAAgB,EAC1B,SAAS,EAAE,OAAO,CAAC,aAAa,EAChC,SAAS,QACT,KAAK,EACH,gBAAgB;oBACd,CAAC,CAAC,wEAAwE;oBAC1E,CAAC,CAAC,QAAQ,EAEd,UAAU,EAAE;oBACV,QAAQ,EAAE,IAAI;oBACd,OAAO,EAAE;wBACP,KAAK,EAAE,OAAO,CAAC,YAAY;qBAC5B;iBACF,GACD,CACY;QAChB,oBAAC,aAAa;YACZ,oBAAC,MAAM,IACL,OAAO,EAAE,GAAG,EAAE;oBACZ,IAAI,CAAC,QAAQ,IAAI,EAAE,CAAC,CAAA;oBACpB,OAAO,CAAC,MAAM,CAAC,qBAAqB,EAAE,SAAS,CAAC,CAAA;gBAClD,CAAC,EACD,QAAQ,EAAE,OAAO,IAAI,CAAC,CAAC,KAAK,IAAI,gBAAgB,EAChD,KAAK,EAAC,SAAS,EACf,SAAS,EAAE,oBAAC,eAAe,OAAG,wBAGvB;YACT,oBAAC,MAAM,IACL,OAAO,EAAE,GAAG,EAAE;oBACZ,MAAM,YAAY,GAAG,IAAI,IAAI,CAAC,CAAC,QAAQ,IAAI,EAAE,CAAC,EAAE;wBAC9C,IAAI,EAAE,4BAA4B;qBACnC,CAAC,CAAA;oBACF,MAAM,CAAC,YAAY,EAAE,oBAAoB,CAAC,CAAA;gBAC5C,CAAC,EACD,QAAQ,EAAE,OAAO,IAAI,CAAC,CAAC,KAAK,EAC5B,KAAK,EAAC,SAAS,EACf,SAAS,EAAE,oBAAC,UAAU,OAAG,qBAGlB;YACT,oBAAC,MAAM,IAAC,OAAO,EAAE,WAAW,EAAE,OAAO,EAAC,WAAW,YAExC,CACK,CACT,CACV,CAAA;AACH,CAAC;AAED,eAAe,QAAQ,CAAC,cAAc,CAAC,CAAA"}
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@@ -9,7 +9,7 @@ import ArrowForwardIcon from '@mui/icons-material/ArrowForward';
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import ArrowBackIcon from '@mui/icons-material/ArrowBack';
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// locals
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import { WIDGET_HEIGHT, SPACING, HEADER_BAR_HEIGHT, } from '..';
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import
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import OverviewScalebar from './OverviewScalebar';
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import ZoomControls from './ZoomControls';
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import SearchBox from './SearchBox';
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const useStyles = makeStyles()(theme => ({
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React.createElement("div", { className: classes.spacer })));
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const LinearGenomeViewHeader = observer(({ model }) => {
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return !model.hideHeader ? (model.hideHeaderOverview ? (React.createElement(Controls, { model: model })) : (React.createElement(
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return !model.hideHeader ? (model.hideHeaderOverview ? (React.createElement(Controls, { model: model })) : (React.createElement(OverviewScalebar, { model: model },
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React.createElement(Controls, { model: model })))) : null;
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export default LinearGenomeViewHeader;
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import React from 'react';
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import { Button,
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import {
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import CloseIcon from '@mui/icons-material/Close';
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const useStyles = makeStyles()(theme => ({
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closeButton: {
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position: 'absolute',
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right: theme.spacing(1),
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color: theme.palette.grey[500],
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}));
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import { Button, DialogActions, DialogContent, Divider } from '@mui/material';
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import { Dialog } from '@jbrowse/core/ui';
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return (React.createElement(Dialog, { open: true, maxWidth: "xl", onClose: handleClose },
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"Using the search box",
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handleClose ? (React.createElement(IconButton, { className: classes.closeButton, onClick: () => handleClose() },
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React.createElement(CloseIcon, null))) : null),
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React.createElement(Divider, null),
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return (React.createElement(Dialog, { open: true, maxWidth: "xl", onClose: handleClose, title: "Using the search box" },
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React.createElement(DialogContent, null,
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React.createElement("h3", null, "Searching"),
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@@ -1 +1 @@
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1
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-
{"version":3,"file":"HelpDialog.js","sourceRoot":"","sources":["../../../src/LinearGenomeView/components/HelpDialog.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,MAAM,OAAO,CAAA;AACzB,OAAO,
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+
{"version":3,"file":"HelpDialog.js","sourceRoot":"","sources":["../../../src/LinearGenomeView/components/HelpDialog.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,MAAM,OAAO,CAAA;AACzB,OAAO,EAAE,MAAM,EAAE,aAAa,EAAE,aAAa,EAAE,OAAO,EAAE,MAAM,eAAe,CAAA;AAC7E,OAAO,EAAE,MAAM,EAAE,MAAM,kBAAkB,CAAA;AAEzC,MAAM,CAAC,OAAO,UAAU,UAAU,CAAC,EACjC,WAAW,GAGZ;IACC,OAAO,CACL,oBAAC,MAAM,IACL,IAAI,QACJ,QAAQ,EAAC,IAAI,EACb,OAAO,EAAE,WAAW,EACpB,KAAK,EAAC,sBAAsB;QAE5B,oBAAC,aAAa;YACZ,4CAAkB;YAClB;gBACE,qIAGK;gBACL;;oBAEM,mDAA2B;;oBAAI,kDAA0B;wKAI1D,CACF;YACL,mDAAyB;YACzB;gBACE;oBACE,yCAAiB;6DACd;gBACL;oBACE,yCAAiB;+CACd;gBACL;oBACE,gEAAwC;mFAErC;gBACL;oBACE,0DAAkC;0EAE/B;gBACL;oBACE,mDAA2B;8DACxB;gBACL;oBACE,+DAAuC;0FAEpC;gBACL;oBACE,iDAAyB;sEAEtB,CACF,CACS;QAChB,oBAAC,OAAO,OAAG;QACX,oBAAC,aAAa;YACZ,oBAAC,MAAM,IAAC,OAAO,EAAE,GAAG,EAAE,CAAC,WAAW,EAAE,EAAE,KAAK,EAAC,SAAS,YAE5C,CACK,CACT,CACV,CAAA;AACH,CAAC"}
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@@ -45,11 +45,11 @@ const ImportForm = observer(({ model }) => {
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useEffect(() => {
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setValue(r0);
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}, [r0, selectedAsm]);
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function navToOption(option) {
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async function navToOption(option) {
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@@ -61,16 +61,20 @@ const ImportForm = observer(({ model }) => {
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// 3) else assume it's a locstring and navigate to it
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var _a;
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try {
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if ((option === null || option === void 0 ? void 0 : option.getDisplayString()) === input && option.hasLocation()) {
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navToOption(option);
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await navToOption(option);
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}
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else if ((_a = option === null || option === void 0 ? void 0 : option.results) === null || _a === void 0 ? void 0 : _a.length) {
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model.setSearchResults(option.results, option.getLabel());
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else {
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const [ref, rest] = splitLast(input, ':');
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const allRefs = (assembly === null || assembly === void 0 ? void 0 : assembly.allRefNamesWithLowerCase) || [];
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if (allRefs.includes(input) ||
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(allRefs.includes(ref) && !Number.isNaN(parseInt(rest, 10)))) {
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model.navToLocString(input, selectedAsm);
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await model.navToLocString(input, selectedAsm);
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}
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else {
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const results = await fetchResults({
|
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@@ -85,10 +89,10 @@ const ImportForm = observer(({ model }) => {
|
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model.setSearchResults(results, input.toLowerCase());
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}
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else if (results.length === 1) {
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navToOption(results[0]);
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await navToOption(results[0]);
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}
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else {
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model.navToLocString(input, selectedAsm);
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await model.navToLocString(input, selectedAsm);
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|
}
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}
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}
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@@ -103,11 +107,12 @@ const ImportForm = observer(({ model }) => {
|
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return (React.createElement("div", { className: classes.container },
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displayError ? React.createElement(ErrorMessage, { error: displayError }) : null,
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|
React.createElement(Container, { className: classes.importFormContainer },
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React.createElement("form", { onSubmit: event => {
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React.createElement("form", { onSubmit: async (event) => {
|
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|
event.preventDefault();
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|
model.setError(undefined);
|
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|
if (value) {
|
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|
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// has it's own error handling
|
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|
+
await handleSelectedRegion(value);
|
|
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116
|
}
|
|
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117
|
} },
|
|
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118
|
React.createElement(Grid, { container: true, spacing: 1, justifyContent: "center", alignItems: "center" },
|
|
@@ -116,7 +121,7 @@ const ImportForm = observer(({ model }) => {
|
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116
121
|
React.createElement(AssemblySelector, { onChange: val => {
|
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117
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|
setSelectedAsm(val);
|
|
118
123
|
setValue('');
|
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119
|
-
}, session: session, selected: selectedAsm }))),
|
|
124
|
+
}, localStorageKey: "lgv", session: session, selected: selectedAsm }))),
|
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|
React.createElement(Grid, { item: true }, selectedAsm ? (assemblyError ? (React.createElement(CloseIcon, { style: { color: 'red' } })) : value ? (React.createElement(FormControl, null,
|
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|
React.createElement(RefNameAutocomplete, { fetchResults: queryString => fetchResults({
|
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127
|
queryString,
|
|
@@ -125,7 +130,7 @@ const ImportForm = observer(({ model }) => {
|
|
|
125
130
|
rankSearchResults,
|
|
126
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|
searchScope,
|
|
127
132
|
}), model: model, assemblyName: assemblyError ? undefined : selectedAsm, value: value,
|
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// note: minWidth 270
|
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|
+
// note: minWidth 270 accommodates full width of helperText
|
|
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|
minWidth: 270, onChange: str => setValue(str), onSelect: val => setOption(val), TextFieldProps: {
|
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|
variant: 'outlined',
|
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|
helperText: 'Enter sequence name, feature name, or location',
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"ImportForm.js","sourceRoot":"","sources":["../../../src/LinearGenomeView/components/ImportForm.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,QAAQ,EAAE,SAAS,EAAE,IAAI,EAAE,MAAM,OAAO,CAAA;AACxD,OAAO,EAAE,UAAU,EAAE,MAAM,eAAe,CAAA;AAC1C,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AACrC,OAAO,EAAE,UAAU,EAAE,MAAM,oBAAoB,CAAA;AAC/C,OAAO,EACL,MAAM,EACN,gBAAgB,EAChB,WAAW,EACX,SAAS,EACT,IAAI,GACL,MAAM,eAAe,CAAA;AACtB,OAAO,EAAE,YAAY,EAAE,gBAAgB,EAAE,MAAM,kBAAkB,CAAA;AAGjE,QAAQ;AACR,OAAO,SAAS,MAAM,2BAA2B,CAAA;AAEjD,SAAS;AACT,OAAO,mBAAmB,MAAM,uBAAuB,CAAA;AACvD,OAAO,EAAE,YAAY,EAAE,SAAS,EAAE,MAAM,QAAQ,CAAA;AAEhD,MAAM,mBAAmB,GAAG,IAAI,CAAC,GAAG,EAAE,CAAC,MAAM,CAAC,uBAAuB,CAAC,CAAC,CAAA;AAEvE,MAAM,SAAS,GAAG,UAAU,EAAE,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;IACvC,mBAAmB,EAAE;QACnB,OAAO,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;KAC1B;IACD,MAAM,EAAE;QACN,MAAM,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;KACzB;IACD,SAAS,EAAE;QACT,OAAO,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;KAC1B;CACF,CAAC,CAAC,CAAA;AAIH,MAAM,UAAU,GAAG,QAAQ,CAAC,CAAC,EAAE,KAAK,EAAkB,EAAE,EAAE;;IACxD,MAAM,EAAE,OAAO,EAAE,GAAG,SAAS,EAAE,CAAA;IAC/B,MAAM,OAAO,GAAG,UAAU,CAAC,KAAK,CAAC,CAAA;IACjC,MAAM,EAAE,aAAa,EAAE,eAAe,EAAE,iBAAiB,EAAE,GAAG,OAAO,CAAA;IACrE,MAAM,EAAE,iBAAiB,EAAE,uBAAuB,EAAE,KAAK,EAAE,GAAG,KAAK,CAAA;IACnE,MAAM,CAAC,WAAW,EAAE,cAAc,CAAC,GAAG,QAAQ,CAAC,aAAa,CAAC,CAAC,CAAC,CAAC,CAAA;IAChE,MAAM,CAAC,MAAM,EAAE,SAAS,CAAC,GAAG,QAAQ,EAAc,CAAA;IAElD,MAAM,WAAW,GAAG,KAAK,CAAC,WAAW,CAAC,WAAW,CAAC,CAAA;IAElD,MAAM,QAAQ,GAAG,eAAe,CAAC,GAAG,CAAC,WAAW,CAAC,CAAA;IACjD,MAAM,aAAa,GAAG,aAAa,CAAC,MAAM;QACxC,CAAC,CAAC,QAAQ,aAAR,QAAQ,uBAAR,QAAQ,CAAE,KAAK;QACjB,CAAC,CAAC,0BAA0B,CAAA;IAC9B,MAAM,OAAO,GAAG,CAAA,QAAQ,aAAR,QAAQ,uBAAR,QAAQ,CAAE,OAAO,KAAI,EAAE,CAAA;IACvC,MAAM,YAAY,GAAG,aAAa,IAAI,KAAK,CAAA;IAC3C,MAAM,CAAC,KAAK,EAAE,QAAQ,CAAC,GAAG,QAAQ,CAAC,EAAE,CAAC,CAAA;IACtC,MAAM,EAAE,GAAG,MAAA,OAAO,CAAC,CAAC,CAAC,0CAAE,OAAO,CAAA;IAE9B,kFAAkF;IAClF,sFAAsF;IACtF,sFAAsF;IACtF,yDAAyD;IACzD,SAAS,CAAC,GAAG,EAAE;QACb,QAAQ,CAAC,EAAE,CAAC,CAAA;IACd,CAAC,EAAE,CAAC,EAAE,EAAE,WAAW,CAAC,CAAC,CAAA;IAErB,
|
|
1
|
+
{"version":3,"file":"ImportForm.js","sourceRoot":"","sources":["../../../src/LinearGenomeView/components/ImportForm.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,QAAQ,EAAE,SAAS,EAAE,IAAI,EAAE,MAAM,OAAO,CAAA;AACxD,OAAO,EAAE,UAAU,EAAE,MAAM,eAAe,CAAA;AAC1C,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AACrC,OAAO,EAAE,UAAU,EAAE,MAAM,oBAAoB,CAAA;AAC/C,OAAO,EACL,MAAM,EACN,gBAAgB,EAChB,WAAW,EACX,SAAS,EACT,IAAI,GACL,MAAM,eAAe,CAAA;AACtB,OAAO,EAAE,YAAY,EAAE,gBAAgB,EAAE,MAAM,kBAAkB,CAAA;AAGjE,QAAQ;AACR,OAAO,SAAS,MAAM,2BAA2B,CAAA;AAEjD,SAAS;AACT,OAAO,mBAAmB,MAAM,uBAAuB,CAAA;AACvD,OAAO,EAAE,YAAY,EAAE,SAAS,EAAE,MAAM,QAAQ,CAAA;AAEhD,MAAM,mBAAmB,GAAG,IAAI,CAAC,GAAG,EAAE,CAAC,MAAM,CAAC,uBAAuB,CAAC,CAAC,CAAA;AAEvE,MAAM,SAAS,GAAG,UAAU,EAAE,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;IACvC,mBAAmB,EAAE;QACnB,OAAO,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;KAC1B;IACD,MAAM,EAAE;QACN,MAAM,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;KACzB;IACD,SAAS,EAAE;QACT,OAAO,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;KAC1B;CACF,CAAC,CAAC,CAAA;AAIH,MAAM,UAAU,GAAG,QAAQ,CAAC,CAAC,EAAE,KAAK,EAAkB,EAAE,EAAE;;IACxD,MAAM,EAAE,OAAO,EAAE,GAAG,SAAS,EAAE,CAAA;IAC/B,MAAM,OAAO,GAAG,UAAU,CAAC,KAAK,CAAC,CAAA;IACjC,MAAM,EAAE,aAAa,EAAE,eAAe,EAAE,iBAAiB,EAAE,GAAG,OAAO,CAAA;IACrE,MAAM,EAAE,iBAAiB,EAAE,uBAAuB,EAAE,KAAK,EAAE,GAAG,KAAK,CAAA;IACnE,MAAM,CAAC,WAAW,EAAE,cAAc,CAAC,GAAG,QAAQ,CAAC,aAAa,CAAC,CAAC,CAAC,CAAC,CAAA;IAChE,MAAM,CAAC,MAAM,EAAE,SAAS,CAAC,GAAG,QAAQ,EAAc,CAAA;IAElD,MAAM,WAAW,GAAG,KAAK,CAAC,WAAW,CAAC,WAAW,CAAC,CAAA;IAElD,MAAM,QAAQ,GAAG,eAAe,CAAC,GAAG,CAAC,WAAW,CAAC,CAAA;IACjD,MAAM,aAAa,GAAG,aAAa,CAAC,MAAM;QACxC,CAAC,CAAC,QAAQ,aAAR,QAAQ,uBAAR,QAAQ,CAAE,KAAK;QACjB,CAAC,CAAC,0BAA0B,CAAA;IAC9B,MAAM,OAAO,GAAG,CAAA,QAAQ,aAAR,QAAQ,uBAAR,QAAQ,CAAE,OAAO,KAAI,EAAE,CAAA;IACvC,MAAM,YAAY,GAAG,aAAa,IAAI,KAAK,CAAA;IAC3C,MAAM,CAAC,KAAK,EAAE,QAAQ,CAAC,GAAG,QAAQ,CAAC,EAAE,CAAC,CAAA;IACtC,MAAM,EAAE,GAAG,MAAA,OAAO,CAAC,CAAC,CAAC,0CAAE,OAAO,CAAA;IAE9B,kFAAkF;IAClF,sFAAsF;IACtF,sFAAsF;IACtF,yDAAyD;IACzD,SAAS,CAAC,GAAG,EAAE;QACb,QAAQ,CAAC,EAAE,CAAC,CAAA;IACd,CAAC,EAAE,CAAC,EAAE,EAAE,WAAW,CAAC,CAAC,CAAA;IAErB,KAAK,UAAU,WAAW,CAAC,MAAkB;QAC3C,MAAM,QAAQ,GAAG,MAAM,CAAC,WAAW,EAAE,CAAA;QACrC,MAAM,OAAO,GAAG,MAAM,CAAC,UAAU,EAAE,CAAA;QACnC,IAAI,QAAQ,EAAE;YACZ,MAAM,KAAK,CAAC,cAAc,CAAC,QAAQ,EAAE,WAAW,CAAC,CAAA;YACjD,IAAI,OAAO,EAAE;gBACX,KAAK,CAAC,SAAS,CAAC,OAAO,CAAC,CAAA;aACzB;SACF;IACH,CAAC;IAED,4EAA4E;IAC5E,oBAAoB;IACpB,8CAA8C;IAC9C,4CAA4C;IAC5C,qDAAqD;IACrD,KAAK,UAAU,oBAAoB,CAAC,KAAa;;QAC/C,IAAI;YACF,IAAI,CAAA,MAAM,aAAN,MAAM,uBAAN,MAAM,CAAE,gBAAgB,EAAE,MAAK,KAAK,IAAI,MAAM,CAAC,WAAW,EAAE,EAAE;gBAChE,MAAM,WAAW,CAAC,MAAM,CAAC,CAAA;aAC1B;iBAAM,IAAI,MAAA,MAAM,aAAN,MAAM,uBAAN,MAAM,CAAE,OAAO,0CAAE,MAAM,EAAE;gBAClC,KAAK,CAAC,gBAAgB,CAAC,MAAM,CAAC,OAAO,EAAE,MAAM,CAAC,QAAQ,EAAE,CAAC,CAAA;aAC1D;iBAAM;gBACL,MAAM,CAAC,GAAG,EAAE,IAAI,CAAC,GAAG,SAAS,CAAC,KAAK,EAAE,GAAG,CAAC,CAAA;gBACzC,MAAM,OAAO,GAAG,CAAA,QAAQ,aAAR,QAAQ,uBAAR,QAAQ,CAAE,wBAAwB,KAAI,EAAE,CAAA;gBACxD,IACE,OAAO,CAAC,QAAQ,CAAC,KAAK,CAAC;oBACvB,CAAC,OAAO,CAAC,QAAQ,CAAC,GAAG,CAAC,IAAI,CAAC,MAAM,CAAC,KAAK,CAAC,QAAQ,CAAC,IAAI,EAAE,EAAE,CAAC,CAAC,CAAC,EAC5D;oBACA,MAAM,KAAK,CAAC,cAAc,CAAC,KAAK,EAAE,WAAW,CAAC,CAAA;iBAC/C;qBAAM;oBACL,MAAM,OAAO,GAAG,MAAM,YAAY,CAAC;wBACjC,WAAW,EAAE,KAAK;wBAClB,UAAU,EAAE,OAAO;wBACnB,WAAW;wBACX,iBAAiB;wBACjB,iBAAiB;wBACjB,QAAQ;qBACT,CAAC,CAAA;oBAEF,IAAI,OAAO,CAAC,MAAM,GAAG,CAAC,EAAE;wBACtB,KAAK,CAAC,gBAAgB,CAAC,OAAO,EAAE,KAAK,CAAC,WAAW,EAAE,CAAC,CAAA;qBACrD;yBAAM,IAAI,OAAO,CAAC,MAAM,KAAK,CAAC,EAAE;wBAC/B,MAAM,WAAW,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC,CAAA;qBAC9B;yBAAM;wBACL,MAAM,KAAK,CAAC,cAAc,CAAC,KAAK,EAAE,WAAW,CAAC,CAAA;qBAC/C;iBACF;aACF;SACF;QAAC,OAAO,CAAC,EAAE;YACV,OAAO,CAAC,KAAK,CAAC,CAAC,CAAC,CAAA;YAChB,OAAO,CAAC,MAAM,CAAC,GAAG,CAAC,EAAE,EAAE,SAAS,CAAC,CAAA;SAClC;IACH,CAAC;IAED,wBAAwB;IACxB,4EAA4E;IAC5E,OAAO,CACL,6BAAK,SAAS,EAAE,OAAO,CAAC,SAAS;QAC9B,YAAY,CAAC,CAAC,CAAC,oBAAC,YAAY,IAAC,KAAK,EAAE,YAAY,GAAI,CAAC,CAAC,CAAC,IAAI;QAC5D,oBAAC,SAAS,IAAC,SAAS,EAAE,OAAO,CAAC,mBAAmB;YAC/C,8BACE,QAAQ,EAAE,KAAK,EAAC,KAAK,EAAC,EAAE;oBACtB,KAAK,CAAC,cAAc,EAAE,CAAA;oBACtB,KAAK,CAAC,QAAQ,CAAC,SAAS,CAAC,CAAA;oBACzB,IAAI,KAAK,EAAE;wBACT,8BAA8B;wBAC9B,MAAM,oBAAoB,CAAC,KAAK,CAAC,CAAA;qBAClC;gBACH,CAAC;gBAED,oBAAC,IAAI,IACH,SAAS,QACT,OAAO,EAAE,CAAC,EACV,cAAc,EAAC,QAAQ,EACvB,UAAU,EAAC,QAAQ;oBAEnB,oBAAC,IAAI,IAAC,IAAI;wBACR,oBAAC,WAAW;4BACV,oBAAC,gBAAgB,IACf,QAAQ,EAAE,GAAG,CAAC,EAAE;oCACd,cAAc,CAAC,GAAG,CAAC,CAAA;oCACnB,QAAQ,CAAC,EAAE,CAAC,CAAA;gCACd,CAAC,EACD,eAAe,EAAC,KAAK,EACrB,OAAO,EAAE,OAAO,EAChB,QAAQ,EAAE,WAAW,GACrB,CACU,CACT;oBACP,oBAAC,IAAI,IAAC,IAAI,UACP,WAAW,CAAC,CAAC,CAAC,CACb,aAAa,CAAC,CAAC,CAAC,CACd,oBAAC,SAAS,IAAC,KAAK,EAAE,EAAE,KAAK,EAAE,KAAK,EAAE,GAAI,CACvC,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,CACV,oBAAC,WAAW;wBACV,oBAAC,mBAAmB,IAClB,YAAY,EAAE,WAAW,CAAC,EAAE,CAC1B,YAAY,CAAC;gCACX,WAAW;gCACX,QAAQ;gCACR,iBAAiB;gCACjB,iBAAiB;gCACjB,WAAW;6BACZ,CAAC,EAEJ,KAAK,EAAE,KAAK,EACZ,YAAY,EAAE,aAAa,CAAC,CAAC,CAAC,SAAS,CAAC,CAAC,CAAC,WAAW,EACrD,KAAK,EAAE,KAAK;4BACZ,2DAA2D;4BAC3D,QAAQ,EAAE,GAAG,EACb,QAAQ,EAAE,GAAG,CAAC,EAAE,CAAC,QAAQ,CAAC,GAAG,CAAC,EAC9B,QAAQ,EAAE,GAAG,CAAC,EAAE,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@@ -8,8 +8,8 @@ import Base1DView from '@jbrowse/core/util/Base1DViewModel';
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8
8
|
// locals
|
|
9
9
|
import Ruler from './Ruler';
|
|
10
10
|
import { HEADER_OVERVIEW_HEIGHT, } from '..';
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11
|
-
import { Polygon, Cytobands } from './
|
|
12
|
-
function
|
|
11
|
+
import { Polygon, Cytobands } from './OverviewScalebar';
|
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12
|
+
function Scalebar({ model, fontSize }) {
|
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13
13
|
const { offsetPx, dynamicBlocks: { totalWidthPxWithoutBorders: totalWidthPx, totalBp }, } = model;
|
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14
14
|
const displayBp = getBpDisplayStr(totalBp);
|
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15
15
|
const x0 = Math.max(-offsetPx, 0);
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@@ -82,7 +82,7 @@ const SVGHeader = ({ model }) => {
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82
82
|
React.createElement("g", { transform: `translate(0,${HEADER_OVERVIEW_HEIGHT})` },
|
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83
83
|
React.createElement(Polygon, { overview: overview, model: model, useOffset: false })))) : null,
|
|
84
84
|
React.createElement("g", { transform: `translate(0 ${fontSize + cytobandHeight})` },
|
|
85
|
-
React.createElement(
|
|
85
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+
React.createElement(Scalebar, { model: model, fontSize: fontSize })),
|
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86
86
|
React.createElement("g", { transform: `translate(0 ${rulerHeight + cytobandHeight})` },
|
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87
87
|
React.createElement(SVGRuler, { model: model, fontSize: fontSize, width: width }))));
|
|
88
88
|
};
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@@ -121,8 +121,7 @@ export async function renderToSvg(model, opts) {
|
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|
121
121
|
const displayResults = await Promise.all(tracks.map(async (track) => {
|
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122
122
|
const display = track.displays[0];
|
|
123
123
|
await when(() => (display.ready !== undefined ? display.ready : true));
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124
|
-
|
|
125
|
-
return { track, result };
|
|
124
|
+
return { track, result: await display.renderSvg(opts) };
|
|
126
125
|
}));
|
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127
126
|
// the xlink namespace is used for rendering <image> tag
|
|
128
127
|
return renderToStaticMarkup(React.createElement(Wrapper, null,
|
|
@@ -1 +1 @@
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|
|
1
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-
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+
{"version":3,"file":"LinearGenomeViewSvg.js","sourceRoot":"","sources":["../../../src/LinearGenomeView/components/LinearGenomeViewSvg.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,MAAM,OAAO,CAAA;AACzB,OAAO,EAAE,oBAAoB,EAAE,MAAM,kBAAkB,CAAA;AACvD,OAAO,EAAE,IAAI,EAAE,MAAM,MAAM,CAAA;AAC3B,OAAO,EAAE,SAAS,EAAE,MAAM,iBAAiB,CAAA;AAC3C,OAAO,EAAE,OAAO,EAAE,cAAc,EAAE,MAAM,6BAA6B,CAAA;AACrE,OAAO,EAAE,UAAU,EAAE,eAAe,EAAE,MAAM,oBAAoB,CAAA;AAEhE,OAAO,UAAU,MAAM,oCAAoC,CAAA;AAE3D,SAAS;AACT,OAAO,KAAK,MAAM,SAAS,CAAA;AAC3B,OAAO,EAGL,sBAAsB,GACvB,MAAM,IAAI,CAAA;AACX,OAAO,EAAE,OAAO,EAAE,SAAS,EAAE,MAAM,oBAAoB,CAAA;AAIvD,SAAS,QAAQ,CAAC,EAAE,KAAK,EAAE,QAAQ,EAAoC;IACrE,MAAM,EACJ,QAAQ,EACR,aAAa,EAAE,EAAE,0BAA0B,EAAE,YAAY,EAAE,OAAO,EAAE,GACrE,GAAG,KAAK,CAAA;IACT,MAAM,SAAS,GAAG,eAAe,CAAC,OAAO,CAAC,CAAA;IAC1C,MAAM,EAAE,GAAG,IAAI,CAAC,GAAG,CAAC,CAAC,QAAQ,EAAE,CAAC,CAAC,CAAA;IACjC,MAAM,EAAE,GAAG,EAAE,GAAG,YAAY,CAAA;IAC5B,OAAO,CACL;QACE,8BAAM,EAAE,EAAE,EAAE,EAAE,EAAE,EAAE,EAAE,EAAE,EAAE,EAAE,EAAE,EAAE,EAAE,EAAE,EAAE,EAAE,MAAM,EAAC,OAAO,GAAG;QACvD,8BAAM,EAAE,EAAE,EAAE,EAAE,EAAE,EAAE,EAAE,EAAE,EAAE,EAAE,CAAC,EAAE,EAAE,EAAE,EAAE,EAAE,MAAM,EAAC,OAAO,GAAG;QACtD,8BAAM,EAAE,EAAE,EAAE,EAAE,EAAE,EAAE,EAAE,EAAE,EAAE,EAAE,CAAC,EAAE,EAAE,EAAE,EAAE,EAAE,MAAM,EAAC,OAAO,GAAG;QACtD,8BACE,CAAC,EAAE,EAAE,GAAG,CAAC,EAAE,GAAG,EAAE,CAAC,GAAG,CAAC,EACrB,CAAC,EAAE,QAAQ,GAAG,CAAC,EACf,UAAU,EAAC,QAAQ,EACnB,QAAQ,EAAE,QAAQ,IAEjB,SAAS,CACL,CACN,CACJ,CAAA;AACH,CAAC;AAED,SAAS,QAAQ,CAAC,EAChB,KAAK,EACL,QAAQ,EACR,KAAK,GAKN;IACC,MAAM,EACJ,aAAa,EAAE,EAAE,aAAa,EAAE,EAChC,QAAQ,EAAE,YAAY,EACtB,OAAO,GACR,GAAG,KAAK,CAAA;IACT,MAAM,WAAW,GAAG,aAAa,CAAC,MAAM,GAAG,CAAC,CAAA;IAC5C,OAAO,CACL;QACE;YACE,kCAAU,EAAE,EAAC,YAAY;gBACvB,8BAAM,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,KAAK,EAAE,KAAK,EAAE,MAAM,EAAE,EAAE,GAAI,CACrC,CACN;QACN,aAAa,CAAC,GAAG,CAAC,KAAK,CAAC,EAAE;YACzB,MAAM,EAAE,GAAG,EAAE,KAAK,EAAE,GAAG,EAAE,QAAQ,EAAE,QAAQ,EAAE,OAAO,EAAE,GAAG,KAAK,CAAA;YAC9D,MAAM,UAAU,GAAG,QAAQ,GAAG,YAAY,CAAA;YAC1C,OAAO,CACL,2BAAG,GAAG,EAAE,GAAG,GAAG,EAAE,EAAE,SAAS,EAAE,aAAa,UAAU,KAAK;gBACvD,8BAAM,CAAC,EAAE,UAAU,GAAG,OAAO,EAAE,CAAC,EAAE,QAAQ,EAAE,QAAQ,EAAE,QAAQ,IAC3D,OAAO,CACH;gBACN,WAAW,CAAC,CAAC,CAAC,CACb,2BAAG,SAAS,EAAC,iBAAiB,EAAC,QAAQ,EAAC,kBAAkB;oBACxD,oBAAC,KAAK,IACJ,KAAK,EAAE,KAAK,EACZ,GAAG,EAAE,GAAG,EACR,OAAO,EAAE,OAAO,EAChB,QAAQ,EAAE,QAAQ,GAClB,CACA,CACL,CAAC,CAAC,CAAC,CACF,8BACE,WAAW,EAAE,CAAC,EACd,MAAM,EAAC,OAAO,EACd,EAAE,EAAE,KAAK,GAAG,OAAO,EACnB,EAAE,EAAE,GAAG,GAAG,OAAO,EACjB,EAAE,EAAE,EAAE,EACN,EAAE,EAAE,EAAE,GACN,CACH,CACC,CACL,CAAA;QACH,CAAC,CAAC,CACD,CACJ,CAAA;AACH,CAAC;AAED,MAAM,QAAQ,GAAG,EAAE,CAAA;AACnB,MAAM,WAAW,GAAG,EAAE,CAAA;AACtB,MAAM,UAAU,GAAG,QAAQ,GAAG,CAAC,CAAA;AAC/B,MAAM,aAAa,GAAG,EAAE,CAAA;AACxB,MAAM,YAAY,GAAG,UAAU,GAAG,EAAE,CAAA;AACpC,MAAM,sBAAsB,GAAG,GAAG,CAAA;AASlC,MAAM,WAAW,GAAG,CAAC,MAAe,EAAE,EAAE;IACtC,OAAO,MAAM,CAAC,MAAM,CAAC,CAAC,KAAK,EAAE,KAAK,EAAE,EAAE;QACpC,MAAM,OAAO,GAAG,KAAK,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAA;QACjC,OAAO,KAAK,GAAG,OAAO,CAAC,MAAM,GAAG,aAAa,GAAG,UAAU,CAAA;IAC5D,CAAC,EAAE,CAAC,CAAC,CAAA;AACP,CAAC,CAAA;AAED,yCAAyC;AACzC,MAAM,SAAS,GAAG,CAAC,EAAE,KAAK,EAAkB,EAAE,EAAE;IAC9C,MAAM,EAAE,KAAK,EAAE,aAAa,EAAE,aAAa,EAAE,gBAAgB,EAAE,GAAG,KAAK,CAAA;IACvE,MAAM,EAAE,eAAe,EAAE,GAAG,UAAU,CAAC,KAAK,CAAC,CAAA;IAC7C,MAAM,YAAY,GAAG,aAAa,CAAC,MAAM,GAAG,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,aAAa,CAAC,CAAC,CAAC,CAAA;IACrE,MAAM,QAAQ,GAAG,eAAe,CAAC,GAAG,CAAC,YAAY,CAAC,CAAA;IAElD,MAAM,QAAQ,GAAG,UAAU,CAAC,MAAM,CAAC;QACjC,gBAAgB,EAAE,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,SAAS,CAAC,gBAAgB,CAAC,CAAC;QAC9D,uBAAuB,EAAE,CAAC;QAC1B,iBAAiB,EAAE,KAAK,CAAC,iBAAiB;KAC3C,CAAC,CAAA;IACF,MAAM,cAAc,GAAG,KAAK,CAAC,aAAa,CAAC,aAAa,CAAA;IAExD,QAAQ,CAAC,gBAAgB,CAAC,KAAK,CAAC,CAAA;IAChC,QAAQ,CAAC,cAAc,EAAE,CAAA;IACzB,MAAM,KAAK,GAAG,QAAQ,CAAC,aAAa,CAAC,aAAa,CAAC,CAAC,CAAC,CAAA;IAErD,MAAM,KAAK,GAAG,cAAc,CAAC,CAAC,CAAC,CAAA;IAC/B,MAAM,eAAe,GACnB,QAAQ,CAAC,MAAM,CAAC;QACd,GAAG,KAAK;QACR,KAAK,EAAE,KAAK,CAAC,QAAQ,CAAC,CAAC,CAAC,KAAK,CAAC,GAAG,CAAC,CAAC,CAAC,KAAK,CAAC,KAAK;KAChD,CAAC,IAAI,CAAC,CAAA;IAET,MAAM,IAAI,GAAG,cAAc,CAAC,cAAc,CAAC,MAAM,GAAG,CAAC,CAAC,CAAA;IACtD,MAAM,cAAc,GAClB,QAAQ,CAAC,MAAM,CAAC;QACd,GAAG,IAAI;QACP,KAAK,EAAE,IAAI,CAAC,QAAQ,CAAC,CAAC,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC,IAAI,CAAC,GAAG;KAC7C,CAAC,IAAI,CAAC,CAAA;IAET,MAAM,cAAc,GAAG,aAAa,CAAC,CAAC,CAAC,sBAAsB,CAAC,CAAC,CAAC,CAAC,CAAA;IAEjE,OAAO,CACL,2BAAG,EAAE,EAAC,QAAQ;QACZ,8BAAM,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,QAAQ,EAAE,QAAQ,EAAE,QAAQ,IACxC,YAAY,CACR;QAEN,aAAa,CAAC,CAAC,CAAC,CACf,2BAAG,SAAS,EAAE,eAAe,WAAW,GAAG;YACzC,oBAAC,SAAS,IAAC,QAAQ,EAAE,QAAQ,EAAE,QAAQ,EAAE,QAAQ,EAAE,KAAK,EAAE,KAAK,GAAI;YACnE,8BACE,MAAM,EAAC,KAAK,EACZ,IAAI,EAAC,kBAAkB,EACvB,KAAK,EAAE,IAAI,CAAC,GAAG,CAAC,cAAc,GAAG,eAAe,EAAE,GAAG,CAAC,EACtD,MAAM,EAAE,sBAAsB,GAAG,CAAC,EAClC,CAAC,EAAE,eAAe,EAClB,CAAC,EAAE,GAAG,GACN;YACF,2BAAG,SAAS,EAAE,eAAe,sBAAsB,GAAG;gBACpD,oBAAC,OAAO,IAAC,QAAQ,EAAE,QAAQ,EAAE,KAAK,EAAE,KAAK,EAAE,SAAS,EAAE,KAAK,GAAI,CAC7D,CACF,CACL,CAAC,CAAC,CAAC,IAAI;QAER,2BAAG,SAAS,EAAE,eAAe,QAAQ,GAAG,cAAc,GAAG;YACvD,oBAAC,QAAQ,IAAC,KAAK,EAAE,KAAK,EAAE,QAAQ,EAAE,QAAQ,GAAI,CAC5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import { Base1DViewModel } from '@jbrowse/core/util/Base1DViewModel';
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type LGV = LinearGenomeViewModel;
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declare function
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declare function OverviewRubberband({ model, overview, ControlComponent, }: {
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declare const _default: typeof OverviewRubberband;
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export default _default;
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import React, { useRef, useEffect, useState } from 'react';
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import {
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import { Tooltip } from '@mui/material';
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import { makeStyles } from 'tss-react/mui';
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import { getSession, stringify } from '@jbrowse/core/util';
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import { observer } from 'mobx-react';
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};
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import RubberbandSpan from './RubberbandSpan';
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import { getRelativeX } from './util';
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const useStyles = makeStyles()({
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rubberbandControl: {
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cursor: 'crosshair',
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width: '100%',
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minHeight: 8,
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guide: {
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pointerEvents: 'none',
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height: '100%',
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});
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const HoverTooltip = observer(({ model, open, guideX, overview, }) => {
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var _a;
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@@ -58,21 +34,19 @@ const HoverTooltip = observer(({ model, open, guideX, overview, }) => {
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left: guideX,
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} })));
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function
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function OverviewRubberband({ model, overview, ControlComponent = React.createElement("div", null), }) {
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const { cytobandOffset } = model;
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const [startX, setStartX] = useState();
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const [currentX, setCurrentX] = useState();
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const [guideX, setGuideX] = useState();
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const controlsRef = useRef(null);
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const rubberBandRef = useRef(null);
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const { classes } = useStyles();
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const mouseDragging = startX !== undefined;
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useEffect(() => {
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function globalMouseMove(event) {
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setCurrentX(relativeX);
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setCurrentX(getRelativeX(event, ref));
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}
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}
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function globalMouseUp() {
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@@ -122,14 +96,10 @@ function OverviewRubberBand({ model, overview, ControlComponent = React.createEl
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function mouseDown(event) {
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event.preventDefault();
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event.stopPropagation();
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setStartX(event.clientX - controlsRef.current.getBoundingClientRect().left);
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}
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+
setStartX(getRelativeX(event, controlsRef.current));
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}
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function mouseMove(event) {
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|
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React.createElement(Typography, null, rightBpOffset ? stringify(rightBpOffset) : '')))) : null,
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|
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|
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} }),
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React.createElement("div", { "data-testid": "rubberBand_controls", className: classes.rubberBandControl, role: "presentation", ref: controlsRef, onMouseDown: mouseDown, onMouseOut: mouseOut, onMouseMove: mouseMove }, ControlComponent)));
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leftBpOffset && rightBpOffset ? (React.createElement(RubberbandSpan, { leftBpOffset: leftBpOffset, rightBpOffset: rightBpOffset, width: width, left: left })) : null,
|
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React.createElement("div", { "data-testid": "rubberband_controls", className: classes.rubberbandControl, role: "presentation", ref: controlsRef, onMouseDown: mouseDown, onMouseOut: mouseOut, onMouseMove: mouseMove }, ControlComponent)));
|
|
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|
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|
|
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|
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export default observer(
|
|
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|
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//# sourceMappingURL=
|
|
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|
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export default observer(OverviewRubberband);
|
|
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|
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//# sourceMappingURL=OverviewRubberband.js.map
|
|
@@ -0,0 +1 @@
|
|
|
1
|
+
{"version":3,"file":"OverviewRubberband.js","sourceRoot":"","sources":["../../../src/LinearGenomeView/components/OverviewRubberband.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,MAAM,EAAE,SAAS,EAAE,QAAQ,EAAE,MAAM,OAAO,CAAA;AAC1D,OAAO,EAAE,OAAO,EAAE,MAAM,eAAe,CAAA;AACvC,OAAO,EAAE,UAAU,EAAE,MAAM,eAAe,CAAA;AAC1C,OAAO,EAAE,UAAU,EAAE,SAAS,EAAE,MAAM,oBAAoB,CAAA;AAC1D,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AAGrC,OAAO,cAAc,MAAM,kBAAkB,CAAA;AAC7C,OAAO,EAAE,YAAY,EAAE,MAAM,QAAQ,CAAA;AAIrC,MAAM,SAAS,GAAG,UAAU,EAAE,CAAC;IAC7B,iBAAiB,EAAE;QACjB,MAAM,EAAE,WAAW;QACnB,KAAK,EAAE,MAAM;QACb,SAAS,EAAE,CAAC;KACb;IACD,KAAK,EAAE;QACL,aAAa,EAAE,MAAM;QACrB,MAAM,EAAE,MAAM;QACd,KAAK,EAAE,CAAC;QACR,QAAQ,EAAE,UAAU;QACpB,MAAM,EAAE,EAAE;KACX;CACF,CAAC,CAAA;AAEF,MAAM,YAAY,GAAG,QAAQ,CAC3B,CAAC,EACC,KAAK,EACL,IAAI,EACJ,MAAM,EACN,QAAQ,GAMT,EAAE,EAAE;;IACH,MAAM,EAAE,OAAO,EAAE,GAAG,SAAS,EAAE,CAAA;IAC/B,MAAM,EAAE,cAAc,EAAE,GAAG,KAAK,CAAA;IAChC,MAAM,EAAE,eAAe,EAAE,GAAG,UAAU,CAAC,KAAK,CAAC,CAAA;IAE7C,MAAM,EAAE,GAAG,QAAQ,CAAC,MAAM,CAAC,MAAM,GAAG,cAAc,CAAC,CAAA;IACnD,MAAM,QAAQ,GAAG,eAAe,CAAC,GAAG,CAAC,EAAE,CAAC,YAAY,CAAC,CAAA;IACrD,MAAM,QAAQ,GAAG,MAAA,QAAQ,aAAR,QAAQ,uBAAR,QAAQ,CAAE,SAAS,0CAAE,IAAI,CACxC,CAAC,CAAC,EAAE,CACF,EAAE,CAAC,KAAK,GAAG,CAAC,CAAC,GAAG,CAAC,OAAO,CAAC;QACzB,EAAE,CAAC,KAAK,GAAG,CAAC,CAAC,GAAG,CAAC,KAAK,CAAC;QACvB,EAAE,CAAC,OAAO,KAAK,QAAQ,CAAC,mBAAmB,CAAC,CAAC,CAAC,GAAG,CAAC,SAAS,CAAC,CAAC,CAChE,CAAA;IAED,OAAO,CACL,oBAAC,OAAO,IACN,IAAI,EAAE,IAAI,EACV,SAAS,EAAC,KAAK,EACf,KAAK,EAAE,CAAC,SAAS,CAAC,EAAE,CAAC,EAAE,QAAQ,aAAR,QAAQ,uBAAR,QAAQ,CAAE,GAAG,CAAC,MAAM,CAAC,CAAC,CAAC,IAAI,CAAC,GAAG,CAAC,EACvD,KAAK;QAEL,6BACE,SAAS,EAAE,OAAO,CAAC,KAAK,EACxB,KAAK,EAAE;gBACL,IAAI,EAAE,MAAM;aACb,GACD,CACM,CACX,CAAA;AACH,CAAC,CACF,CAAA;AAED,SAAS,kBAAkB,CAAC,EAC1B,KAAK,EACL,QAAQ,EACR,gBAAgB,GAAG,gCAAO,GAK3B;IACC,MAAM,EAAE,cAAc,EAAE,GAAG,KAAK,CAAA;IAChC,MAAM,CAAC,MAAM,EAAE,SAAS,CAAC,GAAG,QAAQ,EAAU,CAAA;IAC9C,MAAM,CAAC,QAAQ,EAAE,WAAW,CAAC,GAAG,QAAQ,EAAU,CAAA;IAClD,MAAM,CAAC,MAAM,EAAE,SAAS,CAAC,GAAG,QAAQ,EAAU,CAAA;IAC9C,MAAM,WAAW,GAAG,MAAM,CAAiB,IAAI,CAAC,CAAA;IAChD,MAAM,EAAE,OAAO,EAAE,GAAG,SAAS,EAAE,CAAA;IAC/B,MAAM,aAAa,GAAG,MAAM,KAAK,SAAS,CAAA;IAE1C,SAAS,CAAC,GAAG,EAAE;QACb,SAAS,eAAe,CAAC,KAAiB;YACxC,MAAM,GAAG,GAAG,WAAW,CAAC,OAAO,CAAA;YAC/B,IAAI,GAAG,IAAI,aAAa,EAAE;gBACxB,WAAW,CAAC,YAAY,CAAC,KAAK,EAAE,GAAG,CAAC,CAAC,CAAA;aACtC;QACH,CAAC;QAED,SAAS,aAAa;YACpB,iBAAiB;YACjB,IAAI,MAAM,KAAK,SAAS,IAAI,QAAQ,KAAK,SAAS,EAAE;gBAClD,IAAI,IAAI,CAAC,GAAG,CAAC,QAAQ,GAAG,MAAM,CAAC,GAAG,CAAC,EAAE;oBACnC,MAAM,IAAI,GAAG,IAAI,CAAC,GAAG,CAAC,MAAM,EAAE,QAAQ,CAAC,CAAA;oBACvC,MAAM,KAAK,GAAG,IAAI,CAAC,GAAG,CAAC,MAAM,EAAE,QAAQ,CAAC,CAAA;oBACxC,KAAK,CAAC,MAAM,CACV,QAAQ,CAAC,MAAM,CAAC,IAAI,GAAG,cAAc,CAAC,EACtC,QAAQ,CAAC,MAAM,CAAC,KAAK,GAAG,cAAc,CAAC,CACxC,CAAA;iBACF;aACF;YAED,eAAe;YACf,IAAI,MAAM,KAAK,SAAS,IAAI,QAAQ,KAAK,SAAS,EAAE;gBAClD,MAAM,KAAK,GAAG,QAAQ,CAAC,MAAM,CAAC,MAAM,GAAG,cAAc,CAAC,CAAA;gBACtD,IAAI,CAAC,KAAK,CAAC,OAAO,EAAE;oBAClB,UAAU,CAAC,KAAK,CAAC,CAAC,MAAM,CAAC,0BAA0B,CAAC,CAAA;oBACpD,OAAO,CAAC,KAAK,CAAC,0BAA0B,EAAE,KAAK,CAAC,CAAA;iBACjD;qBAAM;oBACL,KAAK,CAAC,QAAQ,CAAC,IAAI,CAAC,KAAK,CAAC,KAAK,CAAC,KAAK,CAAC,EAAE,KAAK,CAAC,OAAO,EAAE,KAAK,CAAC,KAAK,CAAC,CAAA;iBACpE;aACF;YACD,SAAS,CAAC,SAAS,CAAC,CAAA;YACpB,WAAW,CAAC,SAAS,CAAC,CAAA;YAEtB,IAAI,MAAM,KAAK,SAAS,EAAE;gBACxB,SAAS,CAAC,SAAS,CAAC,CAAA;aACrB;QACH,CAAC;QAED,SAAS,aAAa,CAAC,KAAoB;YACzC,IAAI,KAAK,CAAC,GAAG,KAAK,QAAQ,EAAE;gBAC1B,SAAS,CAAC,SAAS,CAAC,CAAA;gBACpB,WAAW,CAAC,SAAS,CAAC,CAAA;aACvB;QACH,CAAC;QAED,IAAI,aAAa,EAAE;YACjB,MAAM,CAAC,gBAAgB,CAAC,WAAW,EAAE,eAAe,EAAE,IAAI,CAAC,CAAA;YAC3D,MAAM,CAAC,gBAAgB,CAAC,SAAS,EAAE,aAAa,EAAE,IAAI,CAAC,CAAA;YACvD,MAAM,CAAC,gBAAgB,CAAC,SAAS,EAAE,aAAa,EAAE,IAAI,CAAC,CAAA;YACvD,OAAO,GAAG,EAAE;gBACV,MAAM,CAAC,mBAAmB,CAAC,WAAW,EAAE,eAAe,EAAE,IAAI,CAAC,CAAA;gBAC9D,MAAM,CAAC,mBAAmB,CAAC,SAAS,EAAE,aAAa,EAAE,IAAI,CAAC,CAAA;gBAC1D,MAAM,CAAC,mBAAmB,CAAC,SAAS,EAAE,aAAa,EAAE,IAAI,CAAC,CAAA;YAC5D,CAAC,CAAA;SACF;QACD,OAAO,GAAG,EAAE,GAAE,CAAC,CAAA;IACjB,CAAC,EAAE,CAAC,aAAa,EAAE,QAAQ,EAAE,MAAM,EAAE,KAAK,EAAE,QAAQ,EAAE,cAAc,CAAC,CAAC,CAAA;IAEtE,SAAS,SAAS,CAAC,KAAuC;QACxD,KAAK,CAAC,cAAc,EAAE,CAAA;QACtB,KAAK,CAAC,eAAe,EAAE,CAAA;QACvB,SAAS,CAAC,YAAY,CAAC,KAAK,EAAE,WAAW,CAAC,OAAO,CAAC,CAAC,CAAA;IACrD,CAAC;IAED,SAAS,SAAS,CAAC,KAAuC;QACxD,SAAS,CAAC,YAAY,CAAC,KAAK,EAAE,WAAW,CAAC,OAAO,CAAC,CAAC,CAAA;IACrD,CAAC;IAED,SAAS,QAAQ;QACf,SAAS,CAAC,SAAS,CAAC,CAAA;IACtB,CAAC;IAED,IAAI,MAAM,KAAK,SAAS,EAAE;QACxB,OAAO,CACL,6BAAK,KAAK,EAAE,EAAE,QAAQ,EAAE,UAAU,EAAE;YACjC,MAAM,KAAK,SAAS,CAAC,CAAC,CAAC,CACtB,oBAAC,YAAY,IACX,KAAK,EAAE,KAAK,EACZ,IAAI,EAAE,CAAC,aAAa,EACpB,QAAQ,EAAE,QAAQ,EAClB,MAAM,EAAE,MAAM,GACd,CACH,CAAC,CAAC,CAAC,IAAI;YACR,6BACE,SAAS,EAAE,OAAO,CAAC,iBAAiB,EACpC,IAAI,EAAC,cAAc,EACnB,GAAG,EAAE,WAAW,EAChB,WAAW,EAAE,SAAS,EACtB,UAAU,EAAE,QAAQ,EACpB,WAAW,EAAE,SAAS,IAErB,gBAAgB,CACb,CACF,CACP,CAAA;KACF;IAED,IAAI,IAAI,GAAG,MAAM,IAAI,CAAC,CAAA;IACtB,IAAI,KAAK,GAAG,CAAC,CAAA;IACb,IAAI,MAAM,KAAK,SAAS,IAAI,QAAQ,KAAK,SAAS,EAAE;QAClD,IAAI,GAAG,QAAQ,GAAG,MAAM,CAAC,CAAC,CAAC,QAAQ,CAAC,CAAC,CAAC,MAAM,CAAA;QAC5C,KAAK,GAAG,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|
|
@@ -122,10 +122,10 @@ declare const Cytobands: ({ overview, block, assembly, }: {
|
|
|
122
122
|
}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>) | undefined;
|
|
123
123
|
block: ContentBlock;
|
|
124
124
|
}) => JSX.Element;
|
|
125
|
-
declare function
|
|
125
|
+
declare function OverviewScalebar({ model, children, }: {
|
|
126
126
|
model: LGV;
|
|
127
127
|
children: React.ReactNode;
|
|
128
128
|
}): JSX.Element;
|
|
129
|
-
declare const _default: typeof
|
|
129
|
+
declare const _default: typeof OverviewScalebar;
|
|
130
130
|
export default _default;
|
|
131
131
|
export { Cytobands, Polygon };
|