@jbrowse/plugin-data-management 2.0.1 → 2.1.0

package/esm/AddTrackWidget/components/AddTrackWidget.js

@@ -1,139 +1,26 @@
-import React, { useState } from 'react';
-import { Alert, Button, Step, StepContent, StepLabel, Stepper, Typography, } from '@mui/material';
-import { makeStyles } from 'tss-react/mui';
-import { getSession, isElectron, supportedIndexingAdapters, } from '@jbrowse/core/util';
-import { getConf } from '@jbrowse/core/configuration';
+import React from 'react';
 import { observer } from 'mobx-react';
+import { FormControl, FormHelperText, Select, MenuItem } from '@mui/material';
+import { useLocalStorage } from '@jbrowse/core/util';
 import { getEnv } from 'mobx-state-tree';
-// locals
-import ConfirmTrack from './ConfirmTrack';
-import TrackSourceSelect from './TrackSourceSelect';
-const useStyles = makeStyles()(theme => ({
-    root: {
-        marginTop: theme.spacing(1),
-    },
-    stepper: {
-        backgroundColor: theme.palette.background.default,
-    },
-    button: {
-        marginTop: theme.spacing(1),
-        marginRight: theme.spacing(1),
-    },
-    actionsContainer: {
-        marginBottom: theme.spacing(2),
-    },
-    stepContent: {
-        margin: theme.spacing(1),
-    },
-    alertContainer: {
-        padding: `${theme.spacing(2)}px 0px ${theme.spacing(2)}px 0px`,
-    },
-}));
-const steps = ['Enter track data', 'Confirm track type'];
-function AddTrackWidget({ model }) {
-    const [activeStep, setActiveStep] = useState(0);
-    const { classes } = useStyles();
-    const session = getSession(model);
-    const { pluginManager } = getEnv(session);
-    const { rootModel } = pluginManager;
-    const { jobsManager } = rootModel;
-    const { assembly, trackAdapter, trackData, trackName, trackType, textIndexTrack, textIndexingConf, } = model;
-    const [trackErrorMessage, setTrackErrorMessage] = useState();
-    function getStepContent(step) {
-        switch (step) {
-            case 0:
-                return React.createElement(TrackSourceSelect, { model: model });
-            case 1:
-                return React.createElement(ConfirmTrack, { model: model });
-            default:
-                return React.createElement(Typography, null, "Unknown step");
-        }
-    }
-    async function handleNext() {
-        if (activeStep !== steps.length - 1) {
-            setActiveStep(activeStep + 1);
-            return;
-        }
-        const trackId = `${trackName
-            .toLowerCase()
-            .replace(/ /g, '_')}-${Date.now()}${session.adminMode ? '' : '-sessionTrack'}`;
-        const assemblyInstance = session.assemblyManager.get(assembly);
-        if (trackAdapter && trackAdapter.type !== 'UNKNOWN') {
-            // @ts-ignore
-            session.addTrackConf({
-                trackId,
-                type: trackType,
-                name: trackName,
-                assemblyNames: [assembly],
-                adapter: {
-                    ...trackAdapter,
-                    sequenceAdapter: getConf(assemblyInstance, ['sequence', 'adapter']),
-                },
-            });
-            const textSearchingDefault = {
-                attributes: ['Name', 'ID'],
-                exclude: ['CDS', 'exon'],
-            };
-            if (model.view) {
-                model.view.showTrack(trackId);
-                if (isElectron) {
-                    if (textIndexTrack && supportedIndexingAdapters(trackAdapter.type)) {
-                        const attr = textIndexingConf || textSearchingDefault;
-                        const indexName = trackName + '-index';
-                        const indexingParams = {
-                            ...attr,
-                            assemblies: [assembly],
-                            tracks: [trackId],
-                            indexType: 'perTrack',
-                            name: indexName,
-                            timestamp: new Date().toISOString(),
-                        };
-                        const newEntry = {
-                            indexingParams: indexingParams,
-                            name: indexName,
-                            cancelCallback: () => {
-                                jobsManager.abortJob();
-                            },
-                        };
-                        jobsManager.queueJob(newEntry);
-                    }
-                }
-            }
-            else {
-                session.notify('Open a new view, or use the track selector in an existing view, to view this track', 'info');
-            }
-            model.clearData();
-            // @ts-ignore
-            session.hideWidget(model);
-        }
-        else {
-            setTrackErrorMessage('Failed to add track.\nThe configuration of this file is not currently supported.');
-        }
-    }
-    function handleBack() {
-        setTrackErrorMessage(undefined);
-        setActiveStep(activeStep - 1);
-    }
-    function isNextDisabled() {
-        switch (activeStep) {
-            case 0:
-                return !trackData;
-            case 1:
-                return !(trackName && trackType && (trackAdapter === null || trackAdapter === void 0 ? void 0 : trackAdapter.type) && assembly);
-            default:
-                return true;
-        }
-    }
-    return (React.createElement("div", { className: classes.root },
-        React.createElement(Stepper, { className: classes.stepper, activeStep: activeStep, orientation: "vertical" }, steps.map((label, idx) => (React.createElement(Step, { key: label },
-            React.createElement(StepLabel, null, label),
-            React.createElement(StepContent, null,
-                getStepContent(idx),
-                React.createElement("div", { className: classes.actionsContainer },
-                    React.createElement(Button, { disabled: activeStep === 0, onClick: handleBack, className: classes.button }, "Back"),
-                    React.createElement(Button, { disabled: isNextDisabled(), variant: "contained", color: "primary", onClick: handleNext, className: classes.button, "data-testid": "addTrackNextButton" }, activeStep === steps.length - 1 ? 'Add' : 'Next')),
-                trackErrorMessage ? (React.createElement("div", { className: classes.alertContainer },
-                    React.createElement(Alert, { severity: "error" }, trackErrorMessage))) : null)))))));
+import DefaultAddTrackWorkflow from './DefaultAddTrackWorkflow';
+function AddTrackSelector({ model }) {
+    const [val, setVal] = useLocalStorage('trackSelector-choice', 'Default');
+    const { pluginManager } = getEnv(model);
+    const widgets = pluginManager.getElementTypesInGroup('add track workflow');
+    const ComponentMap = {
+        Default: DefaultAddTrackWorkflow,
+        ...Object.fromEntries(widgets.map(w => [w.name, w.ReactComponent])),
+    };
+    // make sure the selected value is in the list
+    const val2 = ComponentMap[val] ? val : 'Default';
+    const Component = ComponentMap[val2];
+    return (React.createElement(React.Fragment, null,
+        React.createElement(FormControl, null,
+            React.createElement(Select, { value: val2, onChange: event => setVal(event.target.value) }, Object.keys(ComponentMap).map(e => (React.createElement(MenuItem, { key: e, value: e }, e)))),
+            React.createElement(FormHelperText, null, "Type of add track workflow")),
+        React.createElement("br", null),
+        React.createElement(Component, { model: model })));
 }
-export default observer(AddTrackWidget);
+export default observer(AddTrackSelector);
 //# sourceMappingURL=AddTrackWidget.js.map

package/esm/AddTrackWidget/components/AddTrackWidget.js.map

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+{"version":3,"file":"AddTrackWidget.js","sourceRoot":"","sources":["../../../src/AddTrackWidget/components/AddTrackWidget.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,MAAM,OAAO,CAAA;AACzB,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AACrC,OAAO,EAAE,WAAW,EAAE,cAAc,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,eAAe,CAAA;AAE7E,OAAO,EAAE,eAAe,EAAE,MAAM,oBAAoB,CAAA;AACpD,OAAO,EAAE,MAAM,EAAE,MAAM,iBAAiB,CAAA;AAIxC,OAAO,uBAAuB,MAAM,2BAA2B,CAAA;AAE/D,SAAS,gBAAgB,CAAC,EAAE,KAAK,EAA4B;IAC3D,MAAM,CAAC,GAAG,EAAE,MAAM,CAAC,GAAG,eAAe,CAAC,sBAAsB,EAAE,SAAS,CAAC,CAAA;IACxE,MAAM,EAAE,aAAa,EAAE,GAAG,MAAM,CAAC,KAAK,CAAC,CAAA;IACvC,MAAM,OAAO,GAAG,aAAa,CAAC,sBAAsB,CAClD,oBAAoB,CACK,CAAA;IAC3B,MAAM,YAAY,GAAG;QACnB,OAAO,EAAE,uBAAuB;QAChC,GAAG,MAAM,CAAC,WAAW,CAAC,OAAO,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,IAAI,EAAE,CAAC,CAAC,cAAc,CAAC,CAAC,CAAC;KACX,CAAA;IAE1D,8CAA8C;IAC9C,MAAM,IAAI,GAAG,YAAY,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,SAAS,CAAA;IAChD,MAAM,SAAS,GAAG,YAAY,CAAC,IAAI,CAAC,CAAA;IACpC,OAAO,CACL;QACE,oBAAC,WAAW;YACV,oBAAC,MAAM,IAAC,KAAK,EAAE,IAAI,EAAE,QAAQ,EAAE,KAAK,CAAC,EAAE,CAAC,MAAM,CAAC,KAAK,CAAC,MAAM,CAAC,KAAK,CAAC,IAC/D,MAAM,CAAC,IAAI,CAAC,YAAY,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,CAAC,CAClC,oBAAC,QAAQ,IAAC,GAAG,EAAE,CAAC,EAAE,KAAK,EAAE,CAAC,IACvB,CAAC,CACO,CACZ,CAAC,CACK;YACT,oBAAC,cAAc,qCAA4C,CAC/C;QAEd,+BAAM;QACN,oBAAC,SAAS,IAAC,KAAK,EAAE,KAAK,GAAI,CAC1B,CACJ,CAAA;AACH,CAAC;AAED,eAAe,QAAQ,CAAC,gBAAgB,CAAC,CAAA"}

package/esm/AddTrackWidget/components/ConfirmTrack.js

@@ -141,13 +141,10 @@ const TextIndexingConfig = observer(({ model }) => {
 });
 const TrackAdapterSelector = observer(({ model }) => {
     const { classes } = useStyles();
-    const session = getSession(model);
     const { trackAdapter } = model;
-    // prettier-ignore
-    const adapters = getAdapterTypes(getEnv(session).pluginManager);
-    return (React.createElement(TextField, { className: classes.spacing, value: (trackAdapter === null || trackAdapter === void 0 ? void 0 : trackAdapter.type) !== 'UNKNOWN' ? trackAdapter === null || trackAdapter === void 0 ? void 0 : trackAdapter.type : '', label: "adapterType", helperText: "Select an adapter type", select: true, fullWidth: true, onChange: event => {
-            model.setAdapterHint(event.target.value);
-        }, SelectProps: {
+    const { pluginManager } = getEnv(model);
+    const adapters = getAdapterTypes(pluginManager);
+    return (React.createElement(TextField, { className: classes.spacing, value: (trackAdapter === null || trackAdapter === void 0 ? void 0 : trackAdapter.type) !== 'UNKNOWN' ? trackAdapter === null || trackAdapter === void 0 ? void 0 : trackAdapter.type : '', label: "adapterType", helperText: "Select an adapter type", select: true, fullWidth: true, onChange: event => model.setAdapterHint(event.target.value), SelectProps: {
             // @ts-ignore
             SelectDisplayProps: { 'data-testid': 'adapterTypeSelect' },
         } },
@@ -164,6 +161,8 @@ const TrackAdapterSelector = observer(({ model }) => {
                 ? (_b = elt.adapterMetadata) === null || _b === void 0 ? void 0 : _b.displayName
                 : elt.name));
         }),
+        // adapters with the 'adapterMetadata.category' property are categorized
+        // by the value of the property here
         categorizeAdapters(adapters.filter(elt => { var _a; return !((_a = elt.adapterMetadata) === null || _a === void 0 ? void 0 : _a.hiddenFromGUI); }))));
 });
 function UnknownAdapterPrompt({ model }) {

package/esm/AddTrackWidget/components/ConfirmTrack.js.map

@@ -1 +1 @@
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package/esm/AddTrackWidget/components/DefaultAddTrackWorkflow.d.ts

@@ -0,0 +1,7 @@
+/// <reference types="react" />
+import { AddTrackModel } from '../model';
+declare function AddTrackWorkflow({ model }: {
+    model: AddTrackModel;
+}): JSX.Element;
+declare const _default: typeof AddTrackWorkflow;
+export default _default;

package/esm/AddTrackWidget/components/DefaultAddTrackWorkflow.js

@@ -0,0 +1,134 @@
+import React, { useState } from 'react';
+import { Alert, Button, Step, StepContent, StepLabel, Stepper, Typography, } from '@mui/material';
+import { makeStyles } from 'tss-react/mui';
+import { getSession, isElectron, supportedIndexingAdapters, } from '@jbrowse/core/util';
+import { getConf } from '@jbrowse/core/configuration';
+import { observer } from 'mobx-react';
+import { getEnv } from 'mobx-state-tree';
+// locals
+import ConfirmTrack from './ConfirmTrack';
+import TrackSourceSelect from './TrackSourceSelect';
+const useStyles = makeStyles()(theme => ({
+    root: {
+        marginTop: theme.spacing(1),
+    },
+    stepper: {
+        backgroundColor: theme.palette.background.default,
+    },
+    button: {
+        marginTop: theme.spacing(1),
+        marginRight: theme.spacing(1),
+    },
+    actionsContainer: {
+        marginBottom: theme.spacing(2),
+    },
+    stepContent: {
+        margin: theme.spacing(1),
+    },
+    alertContainer: {
+        padding: `${theme.spacing(2)}px 0px ${theme.spacing(2)}px 0px`,
+    },
+}));
+const steps = ['Enter track data', 'Confirm track type'];
+function AddTrackWorkflow({ model }) {
+    const [activeStep, setActiveStep] = useState(0);
+    const { classes } = useStyles();
+    const { pluginManager } = getEnv(model);
+    const { rootModel } = pluginManager;
+    const { jobsManager } = rootModel;
+    const session = getSession(model);
+    const { assembly, trackAdapter, trackData, trackName, trackType, textIndexTrack, textIndexingConf, } = model;
+    const [trackErrorMessage, setTrackErrorMessage] = useState();
+    function getStepContent(step) {
+        switch (step) {
+            case 0:
+                return React.createElement(TrackSourceSelect, { model: model });
+            case 1:
+                return React.createElement(ConfirmTrack, { model: model });
+            default:
+                return React.createElement(Typography, null, "Unknown step");
+        }
+    }
+    async function handleNext() {
+        if (activeStep !== steps.length - 1) {
+            setActiveStep(activeStep + 1);
+            return;
+        }
+        const trackId = [
+            `${trackName.toLowerCase().replace(/ /g, '_')}-${Date.now()}`,
+            `${session.adminMode ? '' : '-sessionTrack'}`,
+        ].join('');
+        const assemblyInstance = session.assemblyManager.get(assembly);
+        if (trackAdapter && trackAdapter.type !== 'UNKNOWN') {
+            session.addTrackConf({
+                trackId,
+                type: trackType,
+                name: trackName,
+                assemblyNames: [assembly],
+                adapter: {
+                    ...trackAdapter,
+                    sequenceAdapter: getConf(assemblyInstance, ['sequence', 'adapter']),
+                },
+            });
+            if (model.view) {
+                model.view.showTrack(trackId);
+                if (isElectron &&
+                    textIndexTrack &&
+                    supportedIndexingAdapters(trackAdapter.type)) {
+                    const attr = textIndexingConf || {
+                        attributes: ['Name', 'ID'],
+                        exclude: ['CDS', 'exon'],
+                    };
+                    const indexName = trackName + '-index';
+                    const newEntry = {
+                        indexingParams: {
+                            ...attr,
+                            assemblies: [assembly],
+                            tracks: [trackId],
+                            indexType: 'perTrack',
+                            name: indexName,
+                            timestamp: new Date().toISOString(),
+                        },
+                        name: indexName,
+                        cancelCallback: () => jobsManager.abortJob(),
+                    };
+                    jobsManager.queueJob(newEntry);
+                }
+            }
+            else {
+                session.notify('Open a new view, or use the track selector in an existing view, to view this track', 'info');
+            }
+            model.clearData();
+            session.hideWidget(model);
+        }
+        else {
+            setTrackErrorMessage('Failed to add track.\nThe configuration of this file is not currently supported.');
+        }
+    }
+    function handleBack() {
+        setTrackErrorMessage(undefined);
+        setActiveStep(activeStep - 1);
+    }
+    function isNextDisabled() {
+        switch (activeStep) {
+            case 0:
+                return !trackData;
+            case 1:
+                return !(trackName && trackType && (trackAdapter === null || trackAdapter === void 0 ? void 0 : trackAdapter.type) && assembly);
+            default:
+                return true;
+        }
+    }
+    return (React.createElement("div", { className: classes.root },
+        React.createElement(Stepper, { className: classes.stepper, activeStep: activeStep, orientation: "vertical" }, steps.map((label, idx) => (React.createElement(Step, { key: label },
+            React.createElement(StepLabel, null, label),
+            React.createElement(StepContent, null,
+                getStepContent(idx),
+                React.createElement("div", { className: classes.actionsContainer },
+                    React.createElement(Button, { disabled: activeStep === 0, onClick: handleBack, className: classes.button }, "Back"),
+                    React.createElement(Button, { disabled: isNextDisabled(), variant: "contained", color: "primary", onClick: handleNext, className: classes.button, "data-testid": "addTrackNextButton" }, activeStep === steps.length - 1 ? 'Add' : 'Next')),
+                trackErrorMessage ? (React.createElement("div", { className: classes.alertContainer },
+                    React.createElement(Alert, { severity: "error" }, trackErrorMessage))) : null)))))));
+}
+export default observer(AddTrackWorkflow);
+//# sourceMappingURL=DefaultAddTrackWorkflow.js.map

package/esm/AddTrackWidget/components/DefaultAddTrackWorkflow.js.map

@@ -0,0 +1 @@
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package/esm/HierarchicalTrackSelectorWidget/components/Header.d.ts

@@ -0,0 +1,10 @@
+/// <reference types="react" />
+import { HierarchicalTrackSelectorModel } from '../model';
+declare function HierarchicalTrackSelectorHeader({ model, setHeaderHeight, setAssemblyIdx, assemblyIdx, }: {
+    model: HierarchicalTrackSelectorModel;
+    setHeaderHeight: (n: number) => void;
+    setAssemblyIdx: (n: number) => void;
+    assemblyIdx: number;
+}): JSX.Element;
+declare const _default: typeof HierarchicalTrackSelectorHeader;
+export default _default;

package/esm/HierarchicalTrackSelectorWidget/components/Header.js

@@ -0,0 +1,149 @@
+import React, { Suspense, lazy, useState } from 'react';
+import { makeStyles } from 'tss-react/mui';
+import { Badge, IconButton, InputAdornment, TextField } from '@mui/material';
+// icons
+import ClearIcon from '@mui/icons-material/Clear';
+import MenuIcon from '@mui/icons-material/Menu';
+import ShoppingCartIcon from '@mui/icons-material/ShoppingCart';
+import { Cable } from '@jbrowse/core/ui/Icons';
+// other
+import JBrowseMenu from '@jbrowse/core/ui/Menu';
+import { getSession, isSessionModelWithWidgets, isSessionModelWithConnections, isSessionWithAddTracks, } from '@jbrowse/core/util';
+import { readConfObject, } from '@jbrowse/core/configuration';
+import { observer } from 'mobx-react';
+import { getEnv } from 'mobx-state-tree';
+// lazy components
+const CloseConnectionDialog = lazy(() => import('./CloseConnectionDialog'));
+const DeleteConnectionDialog = lazy(() => import('./DeleteConnectionDialog'));
+const ManageConnectionsDialog = lazy(() => import('./ManageConnectionsDialog'));
+const ToggleConnectionsDialog = lazy(() => import('./ToggleConnectionsDialog'));
+const useStyles = makeStyles()(theme => ({
+    searchBox: {
+        margin: theme.spacing(2),
+    },
+    menuIcon: {
+        marginRight: theme.spacing(1),
+        marginBottom: 0,
+    },
+}));
+function HierarchicalTrackSelectorHeader({ model, setHeaderHeight, setAssemblyIdx, assemblyIdx, }) {
+    const { classes } = useStyles();
+    const session = getSession(model);
+    const [connectionEl, setConnectionEl] = useState();
+    const [selectionEl, setSelectionEl] = useState();
+    const [menuEl, setMenuEl] = useState();
+    const [modalInfo, setModalInfo] = useState();
+    const [deleteDlgDetails, setDeleteDlgDetails] = useState();
+    const [connectionManagerOpen, setConnectionManagerOpen] = useState(false);
+    const [connectionToggleOpen, setConnectionToggleOpen] = useState(false);
+    const { assemblyNames } = model;
+    const assemblyName = assemblyNames[assemblyIdx];
+    function breakConnection(connectionConf, deletingConnection) {
+        const name = readConfObject(connectionConf, 'name');
+        // @ts-ignore
+        const result = session.prepareToBreakConnection(connectionConf);
+        if (result) {
+            const [safelyBreakConnection, dereferenceTypeCount] = result;
+            if (Object.keys(dereferenceTypeCount).length > 0) {
+                setModalInfo({
+                    connectionConf,
+                    safelyBreakConnection,
+                    dereferenceTypeCount,
+                    name,
+                });
+            }
+            else {
+                safelyBreakConnection();
+            }
+        }
+        if (deletingConnection) {
+            setDeleteDlgDetails({ name, connectionConf });
+        }
+    }
+    const connectionMenuItems = [
+        {
+            label: 'Turn on/off connections...',
+            onClick: () => setConnectionToggleOpen(true),
+        },
+    ];
+    if (isSessionModelWithConnections(session)) {
+        connectionMenuItems.unshift({
+            label: 'Add connection',
+            onClick: () => {
+                if (isSessionModelWithWidgets(session)) {
+                    session.showWidget(session.addWidget('AddConnectionWidget', 'addConnectionWidget'));
+                }
+            },
+        });
+        connectionMenuItems.push({
+            label: 'Delete connections...',
+            onClick: () => setConnectionManagerOpen(true),
+        });
+    }
+    const assemblyMenuItems = assemblyNames.length > 1
+        ? [
+            {
+                label: 'Select assembly...',
+                subMenu: assemblyNames.map((name, idx) => ({
+                    label: name,
+                    onClick: () => setAssemblyIdx(idx),
+                })),
+            },
+        ]
+        : [];
+    const menuItems = [
+        {
+            label: 'Add track...',
+            onClick: () => {
+                if (isSessionModelWithWidgets(session)) {
+                    session.showWidget(session.addWidget('AddTrackWidget', 'addTrackWidget', {
+                        view: model.view.id,
+                    }));
+                }
+            },
+        },
+        ...assemblyMenuItems,
+    ];
+    const items = getEnv(model).pluginManager.evaluateExtensionPoint('TrackSelector-multiTrackMenuItems');
+    return (React.createElement("div", { ref: ref => setHeaderHeight((ref === null || ref === void 0 ? void 0 : ref.getBoundingClientRect().height) || 0), "data-testid": "hierarchical_track_selector" },
+        React.createElement("div", { style: { display: 'flex' } },
+            isSessionWithAddTracks(session) && (React.createElement(IconButton, { className: classes.menuIcon, onClick: event => setMenuEl(event.currentTarget) },
+                React.createElement(MenuIcon, null))),
+            session.makeConnection && (React.createElement(IconButton, { className: classes.menuIcon, onClick: event => setConnectionEl(event.currentTarget) },
+                React.createElement(Cable, null))),
+            model.selection.length ? (React.createElement(IconButton, { className: classes.menuIcon, onClick: event => setSelectionEl(event.currentTarget) },
+                React.createElement(Badge, { badgeContent: model.selection.length, color: "primary" },
+                    React.createElement(ShoppingCartIcon, null)))) : null,
+            React.createElement(TextField, { className: classes.searchBox, label: "Filter tracks", value: model.filterText, onChange: event => model.setFilterText(event.target.value), fullWidth: true, InputProps: {
+                    endAdornment: (React.createElement(InputAdornment, { position: "end" },
+                        React.createElement(IconButton, { color: "secondary", onClick: model.clearFilterText },
+                            React.createElement(ClearIcon, null)))),
+                } })),
+        React.createElement(JBrowseMenu, { anchorEl: connectionEl, open: Boolean(connectionEl), onMenuItemClick: (_, callback) => {
+                callback();
+                setConnectionEl(undefined);
+            }, onClose: () => setConnectionEl(undefined), menuItems: connectionMenuItems }),
+        React.createElement(JBrowseMenu, { anchorEl: menuEl, open: Boolean(menuEl), onMenuItemClick: (_, callback) => {
+                callback();
+                setMenuEl(undefined);
+            }, onClose: () => setMenuEl(undefined), menuItems: menuItems }),
+        React.createElement(JBrowseMenu, { anchorEl: selectionEl, open: Boolean(selectionEl), onMenuItemClick: (_, callback) => {
+                callback();
+                setSelectionEl(undefined);
+            }, onClose: () => setSelectionEl(undefined), menuItems: [
+                { label: 'Clear', onClick: () => model.clearSelection() },
+                ...items.map(item => ({
+                    ...item,
+                    ...('onClick' in item
+                        ? { onClick: () => item.onClick(model) }
+                        : {}),
+                })),
+            ] }),
+        React.createElement(Suspense, { fallback: React.createElement("div", null) },
+            modalInfo ? (React.createElement(CloseConnectionDialog, { modalInfo: modalInfo, setModalInfo: setModalInfo })) : null,
+            deleteDlgDetails ? (React.createElement(DeleteConnectionDialog, { handleClose: () => setDeleteDlgDetails(undefined), deleteDialogDetails: deleteDlgDetails, session: session })) : null,
+            connectionManagerOpen ? (React.createElement(ManageConnectionsDialog, { handleClose: () => setConnectionManagerOpen(false), breakConnection: breakConnection, session: session })) : null,
+            connectionToggleOpen ? (React.createElement(ToggleConnectionsDialog, { handleClose: () => setConnectionToggleOpen(false), session: session, breakConnection: breakConnection, assemblyName: assemblyName })) : null)));
+}
+export default observer(HierarchicalTrackSelectorHeader);
+//# sourceMappingURL=Header.js.map

package/esm/HierarchicalTrackSelectorWidget/components/Header.js.map

@@ -0,0 +1 @@
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