@jbrowse/plugin-data-management 2.0.1 → 2.1.0

package/dist/HierarchicalTrackSelectorWidget/components/Node.js

@@ -0,0 +1,207 @@
+"use strict";
+var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    var desc = Object.getOwnPropertyDescriptor(m, k);
+    if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
+      desc = { enumerable: true, get: function() { return m[k]; } };
+    }
+    Object.defineProperty(o, k2, desc);
+}) : (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    o[k2] = m[k];
+}));
+var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
+    Object.defineProperty(o, "default", { enumerable: true, value: v });
+}) : function(o, v) {
+    o["default"] = v;
+});
+var __importStar = (this && this.__importStar) || function (mod) {
+    if (mod && mod.__esModule) return mod;
+    var result = {};
+    if (mod != null) for (var k in mod) if (k !== "default" && Object.prototype.hasOwnProperty.call(mod, k)) __createBinding(result, mod, k);
+    __setModuleDefault(result, mod);
+    return result;
+};
+var __read = (this && this.__read) || function (o, n) {
+    var m = typeof Symbol === "function" && o[Symbol.iterator];
+    if (!m) return o;
+    var i = m.call(o), r, ar = [], e;
+    try {
+        while ((n === void 0 || n-- > 0) && !(r = i.next()).done) ar.push(r.value);
+    }
+    catch (error) { e = { error: error }; }
+    finally {
+        try {
+            if (r && !r.done && (m = i["return"])) m.call(i);
+        }
+        finally { if (e) throw e.error; }
+    }
+    return ar;
+};
+var __spreadArray = (this && this.__spreadArray) || function (to, from, pack) {
+    if (pack || arguments.length === 2) for (var i = 0, l = from.length, ar; i < l; i++) {
+        if (ar || !(i in from)) {
+            if (!ar) ar = Array.prototype.slice.call(from, 0, i);
+            ar[i] = from[i];
+        }
+    }
+    return to.concat(ar || Array.prototype.slice.call(from));
+};
+var __importDefault = (this && this.__importDefault) || function (mod) {
+    return (mod && mod.__esModule) ? mod : { "default": mod };
+};
+Object.defineProperty(exports, "__esModule", { value: true });
+var react_1 = __importStar(require("react"));
+var material_1 = require("@mui/material");
+var mui_1 = require("tss-react/mui");
+// icons
+var ArrowDropDown_1 = __importDefault(require("@mui/icons-material/ArrowDropDown"));
+var ArrowRight_1 = __importDefault(require("@mui/icons-material/ArrowRight"));
+var MoreHoriz_1 = __importDefault(require("@mui/icons-material/MoreHoriz"));
+var Menu_1 = __importDefault(require("@jbrowse/core/ui/Menu"));
+var util_1 = require("@jbrowse/core/util");
+var configuration_1 = require("@jbrowse/core/configuration");
+var util_2 = require("./util");
+var useStyles = (0, mui_1.makeStyles)()(function (theme) {
+    var _a, _b;
+    return ({
+        compactCheckbox: {
+            padding: 0,
+        },
+        checkboxLabel: {
+            marginRight: 0,
+            '&:hover': {
+                backgroundColor: '#eee',
+            },
+        },
+        contrastColor: {
+            color: theme.palette.secondary.contrastText,
+        },
+        // this accordionBase element's small padding is used to give a margin to
+        // accordionColor it a "margin" because the virtualized elements can't really
+        // use margin in a conventional way (it doesn't affect layout)
+        accordionBase: {
+            display: 'flex',
+        },
+        accordionCard: {
+            padding: 3,
+            cursor: 'pointer',
+            display: 'flex',
+        },
+        nestingLevelMarker: {
+            position: 'absolute',
+            borderLeft: '1.5px solid #555',
+        },
+        // accordionColor set's display:flex so that the child accordionText use
+        // vertically centered text
+        accordionColor: {
+            // @ts-ignore
+            background: (_a = theme.palette.tertiary) === null || _a === void 0 ? void 0 : _a.main,
+            // @ts-ignore
+            color: (_b = theme.palette.tertiary) === null || _b === void 0 ? void 0 : _b.contrastText,
+            width: '100%',
+            display: 'flex',
+            paddingLeft: 5,
+        },
+        // margin:auto 0 to center text vertically
+        accordionText: {
+            margin: 'auto 0',
+        },
+    });
+});
+function treeToMap(tree, map) {
+    if (map === void 0) { map = new Map(); }
+    if (tree.id && tree.children.length) {
+        map.set(tree.id, tree);
+    }
+    for (var i = 0; i < tree.children.length; i++) {
+        var node = tree.children[i];
+        treeToMap(node, map);
+    }
+    return map;
+}
+function isUnsupported(name) {
+    if (name === void 0) { name = ''; }
+    return name.endsWith('(Unsupported)') || name.endsWith('(Unknown)');
+}
+// An individual node in the track selector. Note: manually sets cursor:
+// pointer improves usability for what can be clicked
+function Node(props) {
+    var _a, _b;
+    var data = props.data, isOpen = props.isOpen, style = props.style, setOpen = props.setOpen;
+    var checked = data.checked, conf = data.conf, drawerPosition = data.drawerPosition, id = data.id, isLeaf = data.isLeaf, model = data.model, name = data.name, nestingLevel = data.nestingLevel, onChange = data.onChange, selected = data.selected, toggleCollapse = data.toggleCollapse, tree = data.tree;
+    var classes = useStyles().classes;
+    var width = 10;
+    var _c = __read((0, react_1.useState)(null), 2), menuEl = _c[0], setMenuEl = _c[1];
+    var _d = __read((0, react_1.useState)(), 2), info = _d[0], setInfo = _d[1];
+    var marginLeft = nestingLevel * width + (isLeaf ? width : 0);
+    var description = (conf && (0, configuration_1.readConfObject)(conf, ['description'])) || '';
+    return (react_1.default.createElement("div", { style: style, className: !isLeaf ? classes.accordionBase : undefined },
+        new Array(nestingLevel).fill(0).map(function (_, idx) { return (react_1.default.createElement("div", { key: "mark-".concat(idx), style: { left: idx * width + 4, height: style === null || style === void 0 ? void 0 : style.height }, className: classes.nestingLevelMarker })); }),
+        react_1.default.createElement("div", { className: !isLeaf ? classes.accordionCard : undefined, onClick: function () {
+                if (!menuEl) {
+                    toggleCollapse(id);
+                    setOpen(!isOpen);
+                }
+            }, style: {
+                marginLeft: marginLeft,
+                whiteSpace: 'nowrap',
+                width: '100%',
+            } },
+            react_1.default.createElement("div", { className: !isLeaf ? classes.accordionColor : undefined },
+                !isLeaf ? (react_1.default.createElement("div", { className: classes.accordionText },
+                    react_1.default.createElement(material_1.Typography, null,
+                        isOpen ? react_1.default.createElement(ArrowDropDown_1.default, null) : react_1.default.createElement(ArrowRight_1.default, null),
+                        name,
+                        react_1.default.createElement(material_1.IconButton, { onClick: function (event) {
+                                setMenuEl(event.currentTarget);
+                                event.stopPropagation();
+                            }, className: classes.contrastColor },
+                            react_1.default.createElement(MoreHoriz_1.default, null))))) : (react_1.default.createElement(react_1.default.Fragment, null,
+                    react_1.default.createElement(material_1.Tooltip, { title: description + (selected ? ' (in selection)' : ''), placement: drawerPosition === 'left' ? 'right' : 'left' },
+                        react_1.default.createElement(material_1.FormControlLabel, { className: classes.checkboxLabel, control: react_1.default.createElement(material_1.Checkbox, { className: classes.compactCheckbox, checked: checked, onChange: function () { return onChange(id); }, disabled: isUnsupported(name), inputProps: {
+                                    // @ts-ignore
+                                    'data-testid': "htsTrackEntry-".concat(id),
+                                } }), label: react_1.default.createElement("div", { style: {
+                                    background: selected ? '#cccc' : undefined,
+                                    padding: 1,
+                                } }, name) })),
+                    react_1.default.createElement(material_1.IconButton, { onClick: function (e) { return setInfo({ target: e.currentTarget, id: id, conf: conf }); }, style: { padding: 0 }, color: "secondary", "data-testid": "htsTrackEntryMenu-".concat(id) },
+                        react_1.default.createElement(MoreHoriz_1.default, null)))),
+                menuEl ? (react_1.default.createElement(Menu_1.default, { anchorEl: menuEl, menuItems: [
+                        {
+                            label: 'Add to selection',
+                            onClick: function () {
+                                return model.addToSelection((0, util_2.getAllChildren)(treeToMap(tree).get(id)));
+                            },
+                        },
+                        {
+                            label: 'Remove from selection',
+                            onClick: function () {
+                                return model.removeFromSelection((0, util_2.getAllChildren)(treeToMap(tree).get(id)));
+                            },
+                        },
+                    ], onMenuItemClick: function (_event, callback) {
+                        callback();
+                        setMenuEl(null);
+                    }, open: Boolean(menuEl), onClose: function () { return setMenuEl(null); } })) : null,
+                info ? (react_1.default.createElement(Menu_1.default, { anchorEl: info === null || info === void 0 ? void 0 : info.target, menuItems: __spreadArray(__spreadArray(__spreadArray([], __read((((_b = (_a = (0, util_1.getSession)(model)).getTrackActionMenuItems) === null || _b === void 0 ? void 0 : _b.call(_a, info.conf)) ||
+                        [])), false), [
+                        {
+                            label: 'Add to selection',
+                            onClick: function () { return model.addToSelection([info.conf]); },
+                        }
+                    ], false), __read((selected
+                        ? [
+                            {
+                                label: 'Remove from selection',
+                                onClick: function () { return model.removeFromSelection([info.conf]); },
+                            },
+                        ]
+                        : [])), false), onMenuItemClick: function (_event, callback) {
+                        callback();
+                        setInfo(undefined);
+                    }, open: Boolean(info), onClose: function () { return setInfo(undefined); } })) : null))));
+}
+exports.default = Node;
+//# sourceMappingURL=Node.js.map

package/dist/HierarchicalTrackSelectorWidget/components/Node.js.map

@@ -0,0 +1 @@
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package/dist/HierarchicalTrackSelectorWidget/components/util.d.ts

@@ -0,0 +1,3 @@
+import { AnyConfigurationModel } from '@jbrowse/core/configuration';
+import { TreeNode } from '../model';
+export declare function getAllChildren(subtree?: TreeNode): AnyConfigurationModel[];

package/dist/HierarchicalTrackSelectorWidget/components/util.js

@@ -0,0 +1,11 @@
+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.getAllChildren = void 0;
+function getAllChildren(subtree) {
+    // @ts-ignore
+    return ((subtree === null || subtree === void 0 ? void 0 : subtree.children.map(function (t) {
+        return t.children.length ? getAllChildren(t) : t.conf;
+    })) || []).flat(Infinity);
+}
+exports.getAllChildren = getAllChildren;
+//# sourceMappingURL=util.js.map

package/dist/HierarchicalTrackSelectorWidget/components/util.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"util.js","sourceRoot":"","sources":["../../../src/HierarchicalTrackSelectorWidget/components/util.ts"],"names":[],"mappings":";;;AAGA,SAAgB,cAAc,CAAC,OAAkB;IAC/C,aAAa;IACb,OAAO,CACL,CAAA,OAAO,aAAP,OAAO,uBAAP,OAAO,CAAE,QAAQ,CAAC,GAAG,CAAC,UAAA,CAAC;QACrB,OAAA,CAAC,CAAC,QAAQ,CAAC,MAAM,CAAC,CAAC,CAAC,cAAc,CAAC,CAAC,CAAC,CAAC,CAAC,CAAE,CAAC,CAAC,IAA8B;IAAzE,CAAyE,CAC1E,KAAI,EAAE,CACR,CAAC,IAAI,CAAC,QAAQ,CAAC,CAAA;AAClB,CAAC;AAPD,wCAOC"}

package/dist/HierarchicalTrackSelectorWidget/configSchema.d.ts

@@ -0,0 +1,2 @@
+declare const configSchema: import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
+export default configSchema;

package/dist/HierarchicalTrackSelectorWidget/configSchema.js

@@ -0,0 +1,6 @@
+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });
+var configuration_1 = require("@jbrowse/core/configuration");
+var configSchema = (0, configuration_1.ConfigurationSchema)('HierarchicalTrackSelectorWidget', {});
+exports.default = configSchema;
+//# sourceMappingURL=configSchema.js.map

package/dist/HierarchicalTrackSelectorWidget/configSchema.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"configSchema.js","sourceRoot":"","sources":["../../src/HierarchicalTrackSelectorWidget/configSchema.ts"],"names":[],"mappings":";;AAAA,6DAAiE;AACjE,IAAM,YAAY,GAAG,IAAA,mCAAmB,EAAC,iCAAiC,EAAE,EAAE,CAAC,CAAA;AAC/E,kBAAe,YAAY,CAAA"}

package/dist/HierarchicalTrackSelectorWidget/index.d.ts

@@ -1,2 +1,4 @@
-export { default as stateModelFactory } from './model';
-export declare const configSchema: import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
+import stateModelFactory, { HierarchicalTrackSelectorModel } from './model';
+import configSchema from './configSchema';
+export { stateModelFactory, configSchema };
+export type { HierarchicalTrackSelectorModel };

package/dist/HierarchicalTrackSelectorWidget/index.js

@@ -4,8 +4,8 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
 };
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.configSchema = exports.stateModelFactory = void 0;
-var configuration_1 = require("@jbrowse/core/configuration");
-var model_1 = require("./model");
-Object.defineProperty(exports, "stateModelFactory", { enumerable: true, get: function () { return __importDefault(model_1).default; } });
-exports.configSchema = (0, configuration_1.ConfigurationSchema)('HierarchicalTrackSelectorWidget', {});
+var model_1 = __importDefault(require("./model"));
+exports.stateModelFactory = model_1.default;
+var configSchema_1 = __importDefault(require("./configSchema"));
+exports.configSchema = configSchema_1.default;
 //# sourceMappingURL=index.js.map

package/dist/HierarchicalTrackSelectorWidget/index.js.map

@@ -1 +1 @@
-{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/HierarchicalTrackSelectorWidget/index.ts"],"names":[],"mappings":";;;;;;AAAA,6DAAiE;AAEjE,iCAAsD;AAA7C,2HAAA,OAAO,OAAqB;AACxB,QAAA,YAAY,GAAG,IAAA,mCAAmB,EAC7C,iCAAiC,EACjC,EAAE,CACH,CAAA"}
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/HierarchicalTrackSelectorWidget/index.ts"],"names":[],"mappings":";;;;;;AAAA,kDAA2E;AAGlE,4BAHF,eAAiB,CAGE;AAF1B,gEAAyC;AAEb,uBAFrB,sBAAY,CAEqB"}

package/dist/HierarchicalTrackSelectorWidget/model.d.ts

@@ -1,7 +1,6 @@
 import { Instance } from 'mobx-state-tree';
 import { AnyConfigurationModel } from '@jbrowse/core/configuration';
 import PluginManager from '@jbrowse/core/PluginManager';
-import { AbstractView } from 'react';
 export declare type TreeNode = {
     name: string;
     id: string;
@@ -20,7 +19,16 @@ export default function stateTreeFactory(pluginManager: PluginManager): import("
     filterText: import("mobx-state-tree").IType<string | undefined, string, string>;
     view: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IReferenceType<import("mobx-state-tree").IAnyType>>;
 }, {
-    setView(view: AbstractView): void;
+    selection: ({
+        [x: string]: any;
+    } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
+        setSubschema(slotName: string, data: unknown): any;
+    } & import("mobx-state-tree").IStateTreeNode<import("@jbrowse/core/configuration").AnyConfigurationSchemaType>)[];
+} & {
+    addToSelection(elt: AnyConfigurationModel[]): void;
+    removeFromSelection(elt: AnyConfigurationModel[]): void;
+    clearSelection(): void;
+    setView(view: unknown): void;
     toggleCategory(pathName: string): void;
     clearFilterText(): void;
     setFilterText(newText: string): void;

package/dist/HierarchicalTrackSelectorWidget/model.js

@@ -50,7 +50,7 @@ function passesFilter(filter, config) {
     var categories = (0, configuration_1.readConfObject)(config, 'category');
     var filterLower = filter.toLowerCase();
     return (getTrackName(config).toLowerCase().includes(filterLower) ||
-        (categories === null || categories === void 0 ? void 0 : categories.filter(function (c) { return c.toLowerCase().includes(filterLower); }).length));
+        !!(categories === null || categories === void 0 ? void 0 : categories.filter(function (c) { return c.toLowerCase().includes(filterLower); }).length));
 }
 function getTrackName(config) {
     if (!config.trackId) {
@@ -59,6 +59,26 @@ function getTrackName(config) {
     return ((0, configuration_1.readConfObject)(config, 'name') ||
         "Reference sequence (".concat((0, configuration_1.readConfObject)((0, mobx_state_tree_1.getParent)(config), 'name'), ")"));
 }
+function filterTracks(tracks, self, assemblyName) {
+    var assemblyManager = (0, util_1.getSession)(self).assemblyManager;
+    var pluginManager = (0, mobx_state_tree_1.getEnv)(self).pluginManager;
+    var assembly = assemblyManager.get(assemblyName);
+    if (!assembly) {
+        return [];
+    }
+    return tracks
+        .filter(function (c) {
+        var trackConfAssemblies = (0, configuration_1.readConfObject)(c, 'assemblyNames');
+        var allAliases = assembly.allAliases;
+        return hasAnyOverlap(allAliases, trackConfAssemblies);
+    })
+        .filter(function (c) {
+        var displayTypes = pluginManager.getViewType(self.view.type).displayTypes;
+        var compatDisplays = displayTypes.map(function (d) { return d.name; });
+        var trackDisplays = c.displays.map(function (d) { return d.type; });
+        return hasAnyOverlap(compatDisplays, trackDisplays);
+    });
+}
 function generateHierarchy(model, trackConfigurations, collapsed) {
     var hierarchy = { children: [] };
     var filterText = model.filterText, view = model.view;
@@ -118,7 +138,19 @@ function stateTreeFactory(pluginManager) {
         filterText: '',
         view: mobx_state_tree_1.types.safeReference(pluginManager.pluggableMstType('view', 'stateModel')),
     })
+        .volatile(function () { return ({
+        selection: [],
+    }); })
         .actions(function (self) { return ({
+        addToSelection: function (elt) {
+            self.selection = __spreadArray(__spreadArray([], __read(self.selection), false), __read(elt), false);
+        },
+        removeFromSelection: function (elt) {
+            self.selection = self.selection.filter(function (f) { return !elt.includes(f); });
+        },
+        clearSelection: function () {
+            self.selection = [];
+        },
         setView: function (view) {
             self.view = view;
         },
@@ -177,18 +209,7 @@ function stateTreeFactory(pluginManager) {
             var refseq = self.getRefSeqTrackConf(assemblyName);
             // filter out tracks that don't match the current assembly (check all
             // assembly aliases) and display types
-            return (refseq ? [refseq] : []).concat(__spreadArray([], __read(tracks
-                .filter(function (c) {
-                var trackConfAssemblies = (0, configuration_1.readConfObject)(c, 'assemblyNames');
-                var allAliases = assembly.allAliases;
-                return hasAnyOverlap(allAliases, trackConfAssemblies);
-            })
-                .filter(function (c) {
-                var displayTypes = pluginManager.getViewType(self.view.type).displayTypes;
-                var compatibleDisplays = displayTypes.map(function (d) { return d.name; });
-                var trackDisplays = c.displays.map(function (d) { return d.type; });
-                return hasAnyOverlap(compatibleDisplays, trackDisplays);
-            })), false));
+            return (refseq ? [refseq] : []).concat(__spreadArray([], __read(filterTracks(tracks, self, assemblyName)), false));
         },
         get assemblyNames() {
             var _a;
@@ -198,25 +219,8 @@ function stateTreeFactory(pluginManager) {
             if (!self.view) {
                 return [];
             }
-            var trackConfigurations = connection.tracks;
-            var assemblyManager = (0, util_1.getSession)(self).assemblyManager;
-            var assembly = assemblyManager.get(assemblyName);
-            if (!(assembly && assembly.initialized)) {
-                return [];
-            }
             // filter out tracks that don't match the current display types
-            return trackConfigurations
-                .filter(function (c) {
-                var trackConfAssemblies = (0, configuration_1.readConfObject)(c, 'assemblyNames');
-                var allAliases = assembly.allAliases;
-                return hasAnyOverlap(allAliases, trackConfAssemblies);
-            })
-                .filter(function (c) {
-                var displayTypes = pluginManager.getViewType(self.view.type).displayTypes;
-                var compatibleDisplays = displayTypes.map(function (d) { return d.name; });
-                var trackDisplays = c.displays.map(function (d) { return d.type; });
-                return hasAnyOverlap(compatibleDisplays, trackDisplays);
-            });
+            return filterTracks(connection.tracks, self, assemblyName);
         },
     }); })
         .views(function (self) { return ({

package/dist/HierarchicalTrackSelectorWidget/model.js.map

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+{"version":3,"file":"model.js","sourceRoot":"","sources":["../../src/HierarchicalTrackSelectorWidget/model.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;AAAA,mDAAoE;AACpE,6DAIoC;AACpC,2CAA+C;AAC/C,oDAAwD;AAGxD,SAAS,aAAa,CAAI,EAAY,EAAE,EAAY;IAA1B,mBAAA,EAAA,OAAY;IAAE,mBAAA,EAAA,OAAY;IAClD,OAAO,CAAC,CAAC,EAAE,CAAC,IAAI,CAAC,UAAA,KAAK,IAAI,OAAA,EAAE,CAAC,QAAQ,CAAC,KAAK,CAAC,EAAlB,CAAkB,CAAC,CAAA;AAC/C,CAAC;AAED,SAAS,YAAY,CAAC,MAAc,EAAE,MAA6B;IACjE,IAAM,UAAU,GAAG,IAAA,8BAAc,EAAC,MAAM,EAAE,UAAU,CAAyB,CAAA;IAC7E,IAAM,WAAW,GAAG,MAAM,CAAC,WAAW,EAAE,CAAA;IACxC,OAAO,CACL,YAAY,CAAC,MAAM,CAAC,CAAC,WAAW,EAAE,CAAC,QAAQ,CAAC,WAAW,CAAC;QACxD,CAAC,CAAC,CAAA,UAAU,aAAV,UAAU,uBAAV,UAAU,CAAE,MAAM,CAAC,UAAA,CAAC,IAAI,OAAA,CAAC,CAAC,WAAW,EAAE,CAAC,QAAQ,CAAC,WAAW,CAAC,EAArC,CAAqC,EAAE,MAAM,CAAA,CACxE,CAAA;AACH,CAAC;AAED,SAAS,YAAY,CAAC,MAA6B;IACjD,IAAI,CAAC,MAAM,CAAC,OAAO,EAAE;QACnB,MAAM,IAAI,KAAK,CAAC,aAAa,CAAC,CAAA;KAC/B;IACD,OAAO,CACL,IAAA,8BAAc,EAAC,MAAM,EAAE,MAAM,CAAC;QAC9B,8BAAuB,IAAA,8BAAc,EAAC,IAAA,2BAAS,EAAC,MAAM,CAAC,EAAE,MAAM,CAAC,MAAG,CACpE,CAAA;AACH,CAAC;AAWD,SAAS,YAAY,CACnB,MAA+B,EAC/B,IAAgC,EAChC,YAAoB;IAEZ,IAAA,eAAe,GAAK,IAAA,iBAAU,EAAC,IAAI,CAAC,gBAArB,CAAqB;IACpC,IAAA,aAAa,GAAK,IAAA,wBAAM,EAAC,IAAI,CAAC,cAAjB,CAAiB;IACtC,IAAM,QAAQ,GAAG,eAAe,CAAC,GAAG,CAAC,YAAY,CAAC,CAAA;IAElD,IAAI,CAAC,QAAQ,EAAE;QACb,OAAO,EAAE,CAAA;KACV;IACD,OAAO,MAAM;SACV,MAAM,CAAC,UAAA,CAAC;QACP,IAAM,mBAAmB,GAAG,IAAA,8BAAc,EAAC,CAAC,EAAE,eAAe,CAAC,CAAA;QACtD,IAAA,UAAU,GAAK,QAAQ,WAAb,CAAa;QAC/B,OAAO,aAAa,CAAC,UAAU,EAAE,mBAAmB,CAAC,CAAA;IACvD,CAAC,CAAC;SACD,MAAM,CAAC,UAAA,CAAC;QACC,IAAA,YAAY,GAAK,aAAa,CAAC,WAAW,CAAC,IAAI,CAAC,IAAI,CAAC,IAAI,CAAC,aAA9C,CAA8C;QAClE,IAAM,cAAc,GAAG,YAAY,CAAC,GAAG,CAAC,UAAC,CAAmB,IAAK,OAAA,CAAC,CAAC,IAAI,EAAN,CAAM,CAAC,CAAA;QACxE,IAAM,aAAa,GAAG,CAAC,CAAC,QAAQ,CAAC,GAAG,CAAC,UAAC,CAAmB,IAAK,OAAA,CAAC,CAAC,IAAI,EAAN,CAAM,CAAC,CAAA;QACrE,OAAO,aAAa,CAAC,cAAc,EAAE,aAAa,CAAC,CAAA;IACrD,CAAC,CAAC,CAAA;AACN,CAAC;AAED,SAAgB,iBAAiB,CAC/B,KAAqC,EACrC,mBAA4C,EAC5C,SAAwD;IAExD,IAAM,SAAS,GAAG,EAAE,QAAQ,EAAE,EAAgB,EAAc,CAAA;IACpD,IAAA,UAAU,GAAW,KAAK,WAAhB,EAAE,IAAI,GAAK,KAAK,KAAV,CAAU;IAElC,mBAAmB;SAChB,MAAM,CAAC,UAAA,IAAI,IAAI,OAAA,YAAY,CAAC,UAAU,EAAE,IAAI,CAAC,EAA9B,CAA8B,CAAC;SAC9C,OAAO,CAAC,UAAA,IAAI;QACX,iEAAiE;QACjE,IAAM,UAAU,4BAAO,CAAC,IAAA,8BAAc,EAAC,IAAI,EAAE,UAAU,CAAC,IAAI,EAAE,CAAC,SAAC,CAAA;QAEhE,uEAAuE;QACvE,kEAAkE;QAClE,0BAA0B;QAC1B,IAAI,IAAI,CAAC,OAAO,CAAC,QAAQ,CAAC,cAAc,CAAC,EAAE;YACzC,UAAU,CAAC,OAAO,CAAC,iBAAiB,CAAC,CAAA;SACtC;QAED,IAAI,SAAS,GAAG,SAAS,CAAA;gCAGhB,CAAC;YACR,IAAM,QAAQ,GAAG,UAAU,CAAC,CAAC,CAAC,CAAA;YAC9B,IAAM,GAAG,GAAG,SAAS,CAAC,QAAQ,CAAC,IAAI,CAAC,UAAA,CAAC,IAAI,OAAA,CAAC,CAAC,IAAI,KAAK,QAAQ,EAAnB,CAAmB,CAAC,CAAA;YAC7D,IAAM,EAAE,GAAG,UAAU,CAAC,KAAK,CAAC,CAAC,EAAE,CAAC,GAAG,CAAC,CAAC,CAAC,IAAI,CAAC,GAAG,CAAC,CAAA;YAC/C,IAAI,CAAC,GAAG,EAAE;gBACR,IAAM,CAAC,GAAG;oBACR,QAAQ,EAAE,EAAE;oBACZ,IAAI,EAAE,QAAQ;oBACd,EAAE,IAAA;oBACF,eAAe,EAAE,CAAC,SAAS,CAAC,GAAG,CAAC,EAAE,CAAC;iBACpC,CAAA;gBACD,SAAS,CAAC,QAAQ,CAAC,IAAI,CAAC,CAAC,CAAC,CAAA;gBAC1B,SAAS,GAAG,CAAC,CAAA;aACd;iBAAM;gBACL,SAAS,GAAG,GAAG,CAAA;aAChB;;QAhBH,wDAAwD;QACxD,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,UAAU,CAAC,MAAM,EAAE,CAAC,EAAE;oBAAjC,CAAC;SAgBT;QACD,IAAM,MAAM,GAAG,IAAI,CAAC,MAAoD,CAAA;QAExE,uEAAuE;QACvE,SAAS,CAAC,QAAQ,CAAC,MAAM,CACvB,SAAS,CAAC,QAAQ,CAAC,SAAS,CAAC,UAAA,GAAG,IAAI,OAAA,GAAG,CAAC,QAAQ,CAAC,MAAM,EAAnB,CAAmB,CAAC,EACxD,CAAC,EACD;YACE,EAAE,EAAE,IAAI,CAAC,OAAO;YAChB,IAAI,EAAE,YAAY,CAAC,IAAI,CAAC;YACxB,IAAI,MAAA;YACJ,OAAO,EAAE,CAAC,CAAC,MAAM,CAAC,IAAI,CAAC,UAAA,CAAC,IAAI,OAAA,CAAC,CAAC,aAAa,KAAK,IAAI,EAAxB,CAAwB,CAAC;YACrD,QAAQ,EAAE,EAAE;SACb,CACF,CAAA;IACH,CAAC,CAAC,CAAA;IAEJ,OAAO,SAAS,CAAC,QAAQ,CAAA;AAC3B,CAAC;AA1DD,8CA0DC;AAED,SAAwB,gBAAgB,CAAC,aAA4B;IACnE,OAAO,uBAAK;SACT,KAAK,CAAC,iCAAiC,EAAE;QACxC,EAAE,EAAE,eAAS;QACb,IAAI,EAAE,uBAAK,CAAC,OAAO,CAAC,iCAAiC,CAAC;QACtD,SAAS,EAAE,uBAAK,CAAC,GAAG,CAAC,uBAAK,CAAC,OAAO,CAAC;QACnC,UAAU,EAAE,EAAE;QACd,IAAI,EAAE,uBAAK,CAAC,aAAa,CACvB,aAAa,CAAC,gBAAgB,CAAC,MAAM,EAAE,YAAY,CAAC,CACrD;KACF,CAAC;SACD,QAAQ,CAAC,cAAM,OAAA,CAAC;QACf,SAAS,EAAE,EAA6B;KACzC,CAAC,EAFc,CAEd,CAAC;SACF,OAAO,CAAC,UAAA,IAAI,IAAI,OAAA,CAAC;QAChB,cAAc,EAAd,UAAe,GAA4B;YACzC,IAAI,CAAC,SAAS,0CAAO,IAAI,CAAC,SAAS,kBAAK,GAAG,SAAC,CAAA;QAC9C,CAAC;QACD,mBAAmB,EAAnB,UAAoB,GAA4B;YAC9C,IAAI,CAAC,SAAS,GAAG,IAAI,CAAC,SAAS,CAAC,MAAM,CAAC,UAAA,CAAC,IAAI,OAAA,CAAC,GAAG,CAAC,QAAQ,CAAC,CAAC,CAAC,EAAhB,CAAgB,CAAC,CAAA;QAC/D,CAAC;QACD,cAAc;YACZ,IAAI,CAAC,SAAS,GAAG,EAAE,CAAA;QACrB,CAAC;QACD,OAAO,EAAP,UAAQ,IAAa;YACnB,IAAI,CAAC,IAAI,GAAG,IAAI,CAAA;QAClB,CAAC;QACD,cAAc,EAAd,UAAe,QAAgB;YAC7B,IAAI,CAAC,SAAS,CAAC,GAAG,CAAC,QAAQ,EAAE,CAAC,IAAI,CAAC,SAAS,CAAC,GAAG,CAAC,QAAQ,CAAC,CAAC,CAAA;QAC7D,CAAC;QACD,eAAe;YACb,IAAI,CAAC,UAAU,GAAG,EAAE,CAAA;QACtB,CAAC;QACD,aAAa,EAAb,UAAc,OAAe;YAC3B,IAAI,CAAC,UAAU,GAAG,OAAO,CAAA;QAC3B,CAAC;KACF,CAAC,EAtBe,CAsBf,CAAC;SACF,KAAK,CAAC,UAAA,IAAI,IAAI,OAAA,CAAC;QACd,kBAAkB,EAAlB,UAAmB,YAAoB;;YAC7B,IAAA,eAAe,GAAK,IAAA,iBAAU,EAAC,IAAI,CAAC,gBAArB,CAAqB;YAC5C,IAAM,QAAQ,GAAG,eAAe,CAAC,GAAG,CAAC,YAAY,CAAC,CAAA;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package/dist/index.d.ts

@@ -1,6 +1,8 @@
 /// <reference types="react" />
 import Plugin from '@jbrowse/core/Plugin';
 import PluginManager from '@jbrowse/core/PluginManager';
+import { AddTrackModel } from './AddTrackWidget/model';
+import { HierarchicalTrackSelectorModel } from './HierarchicalTrackSelectorWidget';
 declare const SetDefaultSession: import("react").LazyExoticComponent<({ rootModel, onClose }: {
     rootModel?: unknown;
     onClose: () => void;
@@ -22,6 +24,7 @@ export default class extends Plugin {
         }) => JSX.Element | null>;
     };
     install(pluginManager: PluginManager): void;
-    configure(pluginManager: PluginManager): void;
+    configure(_pluginManager: PluginManager): void;
 }
 export { AssemblyManager, SetDefaultSession };
+export type { HierarchicalTrackSelectorModel, AddTrackModel };

package/dist/index.js

@@ -116,7 +116,7 @@ var default_1 = /** @class */ (function (_super) {
             });
         });
     };
-    default_1.prototype.configure = function (pluginManager) { };
+    default_1.prototype.configure = function (_pluginManager) { };
     return default_1;
 }(Plugin_1.default));
 exports.default = default_1;

package/dist/index.js.map

@@ -1 +1 @@
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package/esm/AddTrackWidget/components/AddTrackWidget.d.ts

@@ -1,7 +1,7 @@
 /// <reference types="react" />
 import { AddTrackModel } from '../model';
-declare function AddTrackWidget({ model }: {
+declare function AddTrackSelector({ model }: {
     model: AddTrackModel;
 }): JSX.Element;
-declare const _default: typeof AddTrackWidget;
+declare const _default: typeof AddTrackSelector;
 export default _default;