@jbrowse/plugin-data-management 1.7.0 → 1.7.4

package/dist/plugin-data-management.cjs.development.js

@@ -1,4856 +0,0 @@
-'use strict';
-
-Object.defineProperty(exports, '__esModule', { value: true });
-
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-
-var React = require('react');
-var React__default = _interopDefault(React);
-var ConnectionType = _interopDefault(require('@jbrowse/core/pluggableElementTypes/ConnectionType'));
-var WidgetType = _interopDefault(require('@jbrowse/core/pluggableElementTypes/WidgetType'));
-var Plugin = _interopDefault(require('@jbrowse/core/Plugin'));
-var models = require('@jbrowse/core/pluggableElementTypes/models');
-var configuration = require('@jbrowse/core/configuration');
-var util = require('@jbrowse/core/util');
-var mobxStateTree = require('mobx-state-tree');
-var io = require('@jbrowse/core/util/io');
-var tracks = require('@jbrowse/core/util/tracks');
-var mst = require('@jbrowse/core/util/types/mst');
-var mobxReact = require('mobx-react');
-var core = require('@material-ui/core');
-var ExpandMoreIcon = _interopDefault(require('@material-ui/icons/ExpandMore'));
-var ClearIcon = _interopDefault(require('@material-ui/icons/Clear'));
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-var CloseIcon = _interopDefault(require('@material-ui/icons/Close'));
-var LockIcon = _interopDefault(require('@material-ui/icons/Lock'));
-var types = require('@jbrowse/core/util/types');
-var PersonIcon = _interopDefault(require('@material-ui/icons/Person'));
-var AddIcon = _interopDefault(require('@material-ui/icons/Add'));
-var CheckIcon = _interopDefault(require('@material-ui/icons/Check'));
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-var IconButton = _interopDefault(require('@material-ui/core/IconButton'));
-var styles = require('@material-ui/core/styles');
-var ArrowBackIosIcon = _interopDefault(require('@material-ui/icons/ArrowBackIos'));
-var CreateIcon = _interopDefault(require('@material-ui/icons/Create'));
-var DeleteIcon = _interopDefault(require('@material-ui/icons/Delete'));
-var FileSelector = _interopDefault(require('@jbrowse/core/ui/FileSelector'));
-var pluginConfig = require('@jbrowse/plugin-config');
-var ArrowDropDownIcon = _interopDefault(require('@material-ui/icons/ArrowDropDown'));
-var ArrowRightIcon = _interopDefault(require('@material-ui/icons/ArrowRight'));
-var MenuIcon = _interopDefault(require('@material-ui/icons/Menu'));
-var MoreIcon = _interopDefault(require('@material-ui/icons/MoreHoriz'));
-var Icons = require('@jbrowse/core/ui/Icons');
-var AutoSizer = _interopDefault(require('react-virtualized-auto-sizer'));
-var JBrowseMenu = _interopDefault(require('@jbrowse/core/ui/Menu'));
-var reactVtree = require('react-vtree');
-var lab = require('@material-ui/lab');
-var ui = require('@jbrowse/core/ui');
-var Button = _interopDefault(require('@material-ui/core/Button'));
-var Step = _interopDefault(require('@material-ui/core/Step'));
-var StepContent = _interopDefault(require('@material-ui/core/StepContent'));
-var StepLabel = _interopDefault(require('@material-ui/core/StepLabel'));
-var Stepper = _interopDefault(require('@material-ui/core/Stepper'));
-var Typography = _interopDefault(require('@material-ui/core/Typography'));
-var MenuItem = _interopDefault(require('@material-ui/core/MenuItem'));
-var TextField = _interopDefault(require('@material-ui/core/TextField'));
-var OpenInNewIcon = _interopDefault(require('@material-ui/icons/OpenInNew'));
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-var ucscConfigSchema = /*#__PURE__*/configuration.ConfigurationSchema('UCSCTrackHubConnection', {
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-    type: 'fileLocation',
-    defaultValue: {
-      uri: 'http://mysite.com/path/to/hub.txt',
-      locationType: 'UriLocation'
-    },
-    description: 'location of the hub file (usually called hub.txt)'
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-  assemblyNames: {
-    type: 'stringArray',
-    defaultValue: [],
-    description: 'optional list of genomes to import from this track hub, if empty all genomes will be imported'
-  }
-}, {
-  baseConfiguration: models.baseConnectionConfig
-});
-
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-  var runtime = function (exports) {
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-            throw arg;
-          } // Be forgiving, per 25.3.3.3.3 of the spec:
-          // https://people.mozilla.org/~jorendorff/es6-draft.html#sec-generatorresume
-
-
-          return doneResult();
-        }
-
-        context.method = method;
-        context.arg = arg;
-
-        while (true) {
-          var delegate = context.delegate;
-
-          if (delegate) {
-            var delegateResult = maybeInvokeDelegate(delegate, context);
-
-            if (delegateResult) {
-              if (delegateResult === ContinueSentinel) continue;
-              return delegateResult;
-            }
-          }
-
-          if (context.method === "next") {
-            // Setting context._sent for legacy support of Babel's
-            // function.sent implementation.
-            context.sent = context._sent = context.arg;
-          } else if (context.method === "throw") {
-            if (state === GenStateSuspendedStart) {
-              state = GenStateCompleted;
-              throw context.arg;
-            }
-
-            context.dispatchException(context.arg);
-          } else if (context.method === "return") {
-            context.abrupt("return", context.arg);
-          }
-
-          state = GenStateExecuting;
-          var record = tryCatch(innerFn, self, context);
-
-          if (record.type === "normal") {
-            // If an exception is thrown from innerFn, we leave state ===
-            // GenStateExecuting and loop back for another invocation.
-            state = context.done ? GenStateCompleted : GenStateSuspendedYield;
-
-            if (record.arg === ContinueSentinel) {
-              continue;
-            }
-
-            return {
-              value: record.arg,
-              done: context.done
-            };
-          } else if (record.type === "throw") {
-            state = GenStateCompleted; // Dispatch the exception by looping back around to the
-            // context.dispatchException(context.arg) call above.
-
-            context.method = "throw";
-            context.arg = record.arg;
-          }
-        }
-      };
-    } // Call delegate.iterator[context.method](context.arg) and handle the
-    // result, either by returning a { value, done } result from the
-    // delegate iterator, or by modifying context.method and context.arg,
-    // setting context.delegate to null, and returning the ContinueSentinel.
-
-
-    function maybeInvokeDelegate(delegate, context) {
-      var method = delegate.iterator[context.method];
-
-      if (method === undefined$1) {
-        // A .throw or .return when the delegate iterator has no .throw
-        // method always terminates the yield* loop.
-        context.delegate = null;
-
-        if (context.method === "throw") {
-          // Note: ["return"] must be used for ES3 parsing compatibility.
-          if (delegate.iterator["return"]) {
-            // If the delegate iterator has a return method, give it a
-            // chance to clean up.
-            context.method = "return";
-            context.arg = undefined$1;
-            maybeInvokeDelegate(delegate, context);
-
-            if (context.method === "throw") {
-              // If maybeInvokeDelegate(context) changed context.method from
-              // "return" to "throw", let that override the TypeError below.
-              return ContinueSentinel;
-            }
-          }
-
-          context.method = "throw";
-          context.arg = new TypeError("The iterator does not provide a 'throw' method");
-        }
-
-        return ContinueSentinel;
-      }
-
-      var record = tryCatch(method, delegate.iterator, context.arg);
-
-      if (record.type === "throw") {
-        context.method = "throw";
-        context.arg = record.arg;
-        context.delegate = null;
-        return ContinueSentinel;
-      }
-
-      var info = record.arg;
-
-      if (!info) {
-        context.method = "throw";
-        context.arg = new TypeError("iterator result is not an object");
-        context.delegate = null;
-        return ContinueSentinel;
-      }
-
-      if (info.done) {
-        // Assign the result of the finished delegate to the temporary
-        // variable specified by delegate.resultName (see delegateYield).
-        context[delegate.resultName] = info.value; // Resume execution at the desired location (see delegateYield).
-
-        context.next = delegate.nextLoc; // If context.method was "throw" but the delegate handled the
-        // exception, let the outer generator proceed normally. If
-        // context.method was "next", forget context.arg since it has been
-        // "consumed" by the delegate iterator. If context.method was
-        // "return", allow the original .return call to continue in the
-        // outer generator.
-
-        if (context.method !== "return") {
-          context.method = "next";
-          context.arg = undefined$1;
-        }
-      } else {
-        // Re-yield the result returned by the delegate method.
-        return info;
-      } // The delegate iterator is finished, so forget it and continue with
-      // the outer generator.
-
-
-      context.delegate = null;
-      return ContinueSentinel;
-    } // Define Generator.prototype.{next,throw,return} in terms of the
-    // unified ._invoke helper method.
-
-
-    defineIteratorMethods(Gp);
-    define(Gp, toStringTagSymbol, "Generator"); // A Generator should always return itself as the iterator object when the
-    // @@iterator function is called on it. Some browsers' implementations of the
-    // iterator prototype chain incorrectly implement this, causing the Generator
-    // object to not be returned from this call. This ensures that doesn't happen.
-    // See https://github.com/facebook/regenerator/issues/274 for more details.
-
-    define(Gp, iteratorSymbol, function () {
-      return this;
-    });
-    define(Gp, "toString", function () {
-      return "[object Generator]";
-    });
-
-    function pushTryEntry(locs) {
-      var entry = {
-        tryLoc: locs[0]
-      };
-
-      if (1 in locs) {
-        entry.catchLoc = locs[1];
-      }
-
-      if (2 in locs) {
-        entry.finallyLoc = locs[2];
-        entry.afterLoc = locs[3];
-      }
-
-      this.tryEntries.push(entry);
-    }
-
-    function resetTryEntry(entry) {
-      var record = entry.completion || {};
-      record.type = "normal";
-      delete record.arg;
-      entry.completion = record;
-    }
-
-    function Context(tryLocsList) {
-      // The root entry object (effectively a try statement without a catch
-      // or a finally block) gives us a place to store values thrown from
-      // locations where there is no enclosing try statement.
-      this.tryEntries = [{
-        tryLoc: "root"
-      }];
-      tryLocsList.forEach(pushTryEntry, this);
-      this.reset(true);
-    }
-
-    exports.keys = function (object) {
-      var keys = [];
-
-      for (var key in object) {
-        keys.push(key);
-      }
-
-      keys.reverse(); // Rather than returning an object with a next method, we keep
-      // things simple and return the next function itself.
-
-      return function next() {
-        while (keys.length) {
-          var key = keys.pop();
-
-          if (key in object) {
-            next.value = key;
-            next.done = false;
-            return next;
-          }
-        } // To avoid creating an additional object, we just hang the .value
-        // and .done properties off the next function object itself. This
-        // also ensures that the minifier will not anonymize the function.
-
-
-        next.done = true;
-        return next;
-      };
-    };
-
-    function values(iterable) {
-      if (iterable) {
-        var iteratorMethod = iterable[iteratorSymbol];
-
-        if (iteratorMethod) {
-          return iteratorMethod.call(iterable);
-        }
-
-        if (typeof iterable.next === "function") {
-          return iterable;
-        }
-
-        if (!isNaN(iterable.length)) {
-          var i = -1,
-              next = function next() {
-            while (++i < iterable.length) {
-              if (hasOwn.call(iterable, i)) {
-                next.value = iterable[i];
-                next.done = false;
-                return next;
-              }
-            }
-
-            next.value = undefined$1;
-            next.done = true;
-            return next;
-          };
-
-          return next.next = next;
-        }
-      } // Return an iterator with no values.
-
-
-      return {
-        next: doneResult
-      };
-    }
-
-    exports.values = values;
-
-    function doneResult() {
-      return {
-        value: undefined$1,
-        done: true
-      };
-    }
-
-    Context.prototype = {
-      constructor: Context,
-      reset: function reset(skipTempReset) {
-        this.prev = 0;
-        this.next = 0; // Resetting context._sent for legacy support of Babel's
-        // function.sent implementation.
-
-        this.sent = this._sent = undefined$1;
-        this.done = false;
-        this.delegate = null;
-        this.method = "next";
-        this.arg = undefined$1;
-        this.tryEntries.forEach(resetTryEntry);
-
-        if (!skipTempReset) {
-          for (var name in this) {
-            // Not sure about the optimal order of these conditions:
-            if (name.charAt(0) === "t" && hasOwn.call(this, name) && !isNaN(+name.slice(1))) {
-              this[name] = undefined$1;
-            }
-          }
-        }
-      },
-      stop: function stop() {
-        this.done = true;
-        var rootEntry = this.tryEntries[0];
-        var rootRecord = rootEntry.completion;
-
-        if (rootRecord.type === "throw") {
-          throw rootRecord.arg;
-        }
-
-        return this.rval;
-      },
-      dispatchException: function dispatchException(exception) {
-        if (this.done) {
-          throw exception;
-        }
-
-        var context = this;
-
-        function handle(loc, caught) {
-          record.type = "throw";
-          record.arg = exception;
-          context.next = loc;
-
-          if (caught) {
-            // If the dispatched exception was caught by a catch block,
-            // then let that catch block handle the exception normally.
-            context.method = "next";
-            context.arg = undefined$1;
-          }
-
-          return !!caught;
-        }
-
-        for (var i = this.tryEntries.length - 1; i >= 0; --i) {
-          var entry = this.tryEntries[i];
-          var record = entry.completion;
-
-          if (entry.tryLoc === "root") {
-            // Exception thrown outside of any try block that could handle
-            // it, so set the completion value of the entire function to
-            // throw the exception.
-            return handle("end");
-          }
-
-          if (entry.tryLoc <= this.prev) {
-            var hasCatch = hasOwn.call(entry, "catchLoc");
-            var hasFinally = hasOwn.call(entry, "finallyLoc");
-
-            if (hasCatch && hasFinally) {
-              if (this.prev < entry.catchLoc) {
-                return handle(entry.catchLoc, true);
-              } else if (this.prev < entry.finallyLoc) {
-                return handle(entry.finallyLoc);
-              }
-            } else if (hasCatch) {
-              if (this.prev < entry.catchLoc) {
-                return handle(entry.catchLoc, true);
-              }
-            } else if (hasFinally) {
-              if (this.prev < entry.finallyLoc) {
-                return handle(entry.finallyLoc);
-              }
-            } else {
-              throw new Error("try statement without catch or finally");
-            }
-          }
-        }
-      },
-      abrupt: function abrupt(type, arg) {
-        for (var i = this.tryEntries.length - 1; i >= 0; --i) {
-          var entry = this.tryEntries[i];
-
-          if (entry.tryLoc <= this.prev && hasOwn.call(entry, "finallyLoc") && this.prev < entry.finallyLoc) {
-            var finallyEntry = entry;
-            break;
-          }
-        }
-
-        if (finallyEntry && (type === "break" || type === "continue") && finallyEntry.tryLoc <= arg && arg <= finallyEntry.finallyLoc) {
-          // Ignore the finally entry if control is not jumping to a
-          // location outside the try/catch block.
-          finallyEntry = null;
-        }
-
-        var record = finallyEntry ? finallyEntry.completion : {};
-        record.type = type;
-        record.arg = arg;
-
-        if (finallyEntry) {
-          this.method = "next";
-          this.next = finallyEntry.finallyLoc;
-          return ContinueSentinel;
-        }
-
-        return this.complete(record);
-      },
-      complete: function complete(record, afterLoc) {
-        if (record.type === "throw") {
-          throw record.arg;
-        }
-
-        if (record.type === "break" || record.type === "continue") {
-          this.next = record.arg;
-        } else if (record.type === "return") {
-          this.rval = this.arg = record.arg;
-          this.method = "return";
-          this.next = "end";
-        } else if (record.type === "normal" && afterLoc) {
-          this.next = afterLoc;
-        }
-
-        return ContinueSentinel;
-      },
-      finish: function finish(finallyLoc) {
-        for (var i = this.tryEntries.length - 1; i >= 0; --i) {
-          var entry = this.tryEntries[i];
-
-          if (entry.finallyLoc === finallyLoc) {
-            this.complete(entry.completion, entry.afterLoc);
-            resetTryEntry(entry);
-            return ContinueSentinel;
-          }
-        }
-      },
-      "catch": function _catch(tryLoc) {
-        for (var i = this.tryEntries.length - 1; i >= 0; --i) {
-          var entry = this.tryEntries[i];
-
-          if (entry.tryLoc === tryLoc) {
-            var record = entry.completion;
-
-            if (record.type === "throw") {
-              var thrown = record.arg;
-              resetTryEntry(entry);
-            }
-
-            return thrown;
-          }
-        } // The context.catch method must only be called with a location
-        // argument that corresponds to a known catch block.
-
-
-        throw new Error("illegal catch attempt");
-      },
-      delegateYield: function delegateYield(iterable, resultName, nextLoc) {
-        this.delegate = {
-          iterator: values(iterable),
-          resultName: resultName,
-          nextLoc: nextLoc
-        };
-
-        if (this.method === "next") {
-          // Deliberately forget the last sent value so that we don't
-          // accidentally pass it on to the delegate.
-          this.arg = undefined$1;
-        }
-
-        return ContinueSentinel;
-      }
-    }; // Regardless of whether this script is executing as a CommonJS module
-    // or not, return the runtime object so that we can declare the variable
-    // regeneratorRuntime in the outer scope, which allows this module to be
-    // injected easily by `bin/regenerator --include-runtime script.js`.
-
-    return exports;
-  }( // If this script is executing as a CommonJS module, use module.exports
-  // as the regeneratorRuntime namespace. Otherwise create a new empty
-  // object. Either way, the resulting object will be used to initialize
-  // the regeneratorRuntime variable at the top of this file.
-   module.exports );
-
-  try {
-    regeneratorRuntime = runtime;
-  } catch (accidentalStrictMode) {
-    // This module should not be running in strict mode, so the above
-    // assignment should always work unless something is misconfigured. Just
-    // in case runtime.js accidentally runs in strict mode, in modern engines
-    // we can explicitly access globalThis. In older engines we can escape
-    // strict mode using a global Function call. This could conceivably fail
-    // if a Content Security Policy forbids using Function, but in that case
-    // the proper solution is to fix the accidental strict mode problem. If
-    // you've misconfigured your bundler to force strict mode and applied a
-    // CSP to forbid Function, and you're not willing to fix either of those
-    // problems, please detail your unique predicament in a GitHub issue.
-    if (typeof globalThis === "object") {
-      globalThis.regeneratorRuntime = runtime;
-    } else {
-      Function("r", "regeneratorRuntime = r")(runtime);
-    }
-  }
-});
-
-function fetchHubFile(_x) {
-  return _fetchHubFile.apply(this, arguments);
-}
-
-function _fetchHubFile() {
-  _fetchHubFile = _asyncToGenerator( /*#__PURE__*/runtime_1.mark(function _callee(hubFileLocation) {
-    var hubFileText, _yield$import, HubFile;
-
-    return runtime_1.wrap(function _callee$(_context) {
-      while (1) {
-        switch (_context.prev = _context.next) {
-          case 0:
-            _context.prev = 0;
-            _context.next = 3;
-            return io.openLocation(hubFileLocation).readFile('utf8');
-
-          case 3:
-            hubFileText = _context.sent;
-            _context.next = 6;
-            return new Promise(function (resolve) { resolve(_interopNamespace(require('@gmod/ucsc-hub'))); });
-
-          case 6:
-            _yield$import = _context.sent;
-            HubFile = _yield$import.HubFile;
-            return _context.abrupt("return", new HubFile(hubFileText));
-
-          case 11:
-            _context.prev = 11;
-            _context.t0 = _context["catch"](0);
-            throw new Error("Not a valid hub.txt file, got error: '".concat(_context.t0, "'"));
-
-          case 14:
-          case "end":
-            return _context.stop();
-        }
-      }
-    }, _callee, null, [[0, 11]]);
-  }));
-  return _fetchHubFile.apply(this, arguments);
-}
-
-function fetchGenomesFile(_x2) {
-  return _fetchGenomesFile.apply(this, arguments);
-}
-
-function _fetchGenomesFile() {
-  _fetchGenomesFile = _asyncToGenerator( /*#__PURE__*/runtime_1.mark(function _callee2(genomesFileLocation) {
-    var genomesFileText, _yield$import2, GenomesFile;
-
-    return runtime_1.wrap(function _callee2$(_context2) {
-      while (1) {
-        switch (_context2.prev = _context2.next) {
-          case 0:
-            _context2.next = 2;
-            return io.openLocation(genomesFileLocation).readFile('utf8');
-
-          case 2:
-            genomesFileText = _context2.sent;
-            _context2.next = 5;
-            return new Promise(function (resolve) { resolve(_interopNamespace(require('@gmod/ucsc-hub'))); });
-
-          case 5:
-            _yield$import2 = _context2.sent;
-            GenomesFile = _yield$import2.GenomesFile;
-            return _context2.abrupt("return", new GenomesFile(genomesFileText));
-
-          case 8:
-          case "end":
-            return _context2.stop();
-        }
-      }
-    }, _callee2);
-  }));
-  return _fetchGenomesFile.apply(this, arguments);
-}
-
-function fetchTrackDbFile(_x3) {
-  return _fetchTrackDbFile.apply(this, arguments);
-}
-
-function _fetchTrackDbFile() {
-  _fetchTrackDbFile = _asyncToGenerator( /*#__PURE__*/runtime_1.mark(function _callee3(trackDbFileLocation) {
-    var text, _yield$import3, TrackDbFile;
-
-    return runtime_1.wrap(function _callee3$(_context3) {
-      while (1) {
-        switch (_context3.prev = _context3.next) {
-          case 0:
-            _context3.next = 2;
-            return io.openLocation(trackDbFileLocation).readFile('utf8');
-
-          case 2:
-            text = _context3.sent;
-            _context3.next = 5;
-            return new Promise(function (resolve) { resolve(_interopNamespace(require('@gmod/ucsc-hub'))); });
-
-          case 5:
-            _yield$import3 = _context3.sent;
-            TrackDbFile = _yield$import3.TrackDbFile;
-            return _context3.abrupt("return", new TrackDbFile(text));
-
-          case 8:
-          case "end":
-            return _context3.stop();
-        }
-      }
-    }, _callee3);
-  }));
-  return _fetchTrackDbFile.apply(this, arguments);
-}
-
-function generateTracks(trackDb, trackDbFileLocation, assemblyName, sequenceAdapter) {
-  var tracks = [];
-  trackDb.forEach(function (track, trackName) {
-    var trackKeys = Array.from(track.keys());
-    var parentTrackKeys = ['superTrack', 'compositeTrack', 'container', 'view'];
-
-    if (trackKeys.some(function (key) {
-      return parentTrackKeys.includes(key);
-    })) {
-      return;
-    }
-
-    var parentTracks = [];
-    var currentTrackName = trackName;
-
-    do {
-      currentTrackName = trackDb.get(currentTrackName).get('parent');
-
-      if (currentTrackName) {
-
-        var _currentTrackName$spl = currentTrackName.split(' ');
-
-        var _currentTrackName$spl2 = _slicedToArray(_currentTrackName$spl, 1);
-
-        currentTrackName = _currentTrackName$spl2[0];
-        parentTracks.push(trackDb.get(currentTrackName));
-      }
-    } while (currentTrackName);
-
-    parentTracks.reverse();
-    var categories = parentTracks.map(function (parentTrack) {
-      return parentTrack.get('shortLabel');
-    });
-    var res = makeTrackConfig(track, categories, trackDbFileLocation, trackDb, sequenceAdapter);
-    res.trackId = "ucsc-trackhub-".concat(util.objectHash(res));
-    res.assemblyNames = [assemblyName];
-    tracks.push(res);
-  });
-  return tracks;
-}
-
-function makeTrackConfig(track, categories, trackDbFileLocation, trackDb, sequenceAdapter) {
-  var trackType = track.get('type');
-
-  if (!trackType) {
-    trackType = trackDb.get(track.get('parent')).get('type');
-  }
-
-  var baseTrackType = trackType.split(' ')[0];
-
-  if (baseTrackType === 'bam' && track.get('bigDataUrl').toLowerCase().endsWith('cram')) {
-    baseTrackType = 'cram';
-  }
-
-  var bigDataLocation;
-
-  if (trackDbFileLocation.uri) {
-    bigDataLocation = {
-      uri: new URL(track.get('bigDataUrl'), trackDbFileLocation.uri).href,
-      locationType: 'UriLocation'
-    };
-  } else {
-    bigDataLocation = {
-      localPath: track.get('bigDataUrl'),
-      locationType: 'LocalPathLocation'
-    };
-  }
-
-  var bigDataIndexLocation;
-
-  switch (baseTrackType) {
-    case 'bam':
-      if (trackDbFileLocation.uri) {
-        bigDataIndexLocation = track.get('bigDataIndex') ? {
-          uri: new URL(track.get('bigDataIndex'), trackDbFileLocation.uri).href,
-          locationType: 'UriLocation'
-        } : {
-          uri: new URL("".concat(track.get('bigDataUrl'), ".bai"), trackDbFileLocation.uri).href,
-          locationType: 'UriLocation'
-        };
-      } else {
-        bigDataIndexLocation = track.get('bigDataIndex') ? {
-          localPath: track.get('bigDataIndex'),
-          locationType: 'LocalPathLocation'
-        } : {
-          localPath: "".concat(track.get('bigDataUrl'), ".bai"),
-          locationType: 'LocalPathLocation'
-        };
-      }
-
-      return {
-        type: 'AlignmentsTrack',
-        name: track.get('shortLabel'),
-        description: track.get('longLabel'),
-        category: categories,
-        adapter: {
-          type: 'BamAdapter',
-          bamLocation: bigDataLocation,
-          index: {
-            location: bigDataIndexLocation
-          }
-        }
-      };
-
-    case 'bed':
-      return tracks.generateUnsupportedTrackConf(track.get('shortLabel'), baseTrackType, categories);
-
-    case 'bed5FloatScore':
-      return tracks.generateUnsupportedTrackConf(track.get('shortLabel'), baseTrackType, categories);
-
-    case 'bedGraph':
-      return tracks.generateUnsupportedTrackConf(track.get('shortLabel'), baseTrackType, categories);
-
-    case 'bedRnaElements':
-      return tracks.generateUnsupportedTrackConf(track.get('shortLabel'), baseTrackType, categories);
-
-    case 'bigBarChart':
-      return {
-        type: 'FeatureTrack',
-        name: track.get('shortLabel'),
-        description: track.get('longLabel'),
-        category: categories,
-        adapter: {
-          type: 'BigBedAdapter',
-          bigBedLocation: bigDataLocation
-        },
-        renderer: {
-          type: 'SvgFeatureRenderer'
-        }
-      };
-
-    case 'bigBed':
-      return {
-        type: 'FeatureTrack',
-        name: track.get('shortLabel'),
-        description: track.get('longLabel'),
-        category: categories,
-        adapter: {
-          type: 'BigBedAdapter',
-          bigBedLocation: bigDataLocation
-        }
-      };
-
-    case 'bigGenePred':
-      return {
-        type: 'FeatureTrack',
-        name: track.get('shortLabel'),
-        description: track.get('longLabel'),
-        category: categories,
-        adapter: {
-          type: 'BigBedAdapter',
-          bigBedLocation: bigDataLocation
-        }
-      };
-
-    case 'bigChain':
-      return {
-        type: 'FeatureTrack',
-        name: track.get('shortLabel'),
-        description: track.get('longLabel'),
-        category: categories,
-        adapter: {
-          type: 'BigBedAdapter',
-          bigBedLocation: bigDataLocation
-        },
-        renderer: {
-          type: 'SvgFeatureRenderer'
-        }
-      };
-
-    case 'bigInteract':
-      return {
-        type: 'FeatureTrack',
-        name: track.get('shortLabel'),
-        description: track.get('longLabel'),
-        category: categories,
-        adapter: {
-          type: 'BigBedAdapter',
-          bigBedLocation: bigDataLocation
-        },
-        renderer: {
-          type: 'SvgFeatureRenderer'
-        }
-      };
-
-    case 'bigMaf':
-      return {
-        type: 'FeatureTrack',
-        name: track.get('shortLabel'),
-        description: track.get('longLabel'),
-        category: categories,
-        adapter: {
-          type: 'BigBedAdapter',
-          bigBedLocation: bigDataLocation
-        },
-        renderer: {
-          type: 'SvgFeatureRenderer'
-        }
-      };
-
-    case 'bigPsl':
-      return {
-        type: 'FeatureTrack',
-        name: track.get('shortLabel'),
-        description: track.get('longLabel'),
-        category: categories,
-        adapter: {
-          type: 'BigBedAdapter',
-          bigBedLocation: bigDataLocation
-        },
-        renderer: {
-          type: 'SvgFeatureRenderer'
-        }
-      };
-
-    case 'bigWig':
-      return {
-        type: 'QuantitativeTrack',
-        name: track.get('shortLabel'),
-        description: track.get('longLabel'),
-        category: categories,
-        adapter: {
-          type: 'BigWigAdapter',
-          bigWigLocation: bigDataLocation
-        }
-      };
-
-    case 'broadPeak':
-      return tracks.generateUnsupportedTrackConf(track.get('shortLabel'), baseTrackType, categories);
-
-    case 'coloredExon':
-      return tracks.generateUnsupportedTrackConf(track.get('shortLabel'), baseTrackType, categories);
-
-    case 'cram':
-      if (trackDbFileLocation.uri) {
-        bigDataIndexLocation = track.get('bigDataIndex') ? {
-          uri: new URL(track.get('bigDataIndex'), trackDbFileLocation.uri).href,
-          locationType: 'UriLocation'
-        } : {
-          uri: new URL("".concat(track.get('bigDataUrl'), ".crai"), trackDbFileLocation.uri).href,
-          locationType: 'UriLocation'
-        };
-      } else {
-        bigDataIndexLocation = track.get('bigDataIndex') ? {
-          localPath: track.get('bigDataIndex'),
-          locationType: 'LocalPathLocation'
-        } : {
-          localPath: "".concat(track.get('bigDataUrl'), ".crai"),
-          locationType: 'LocalPathLocation'
-        };
-      }
-
-      return {
-        type: 'AlignmentsTrack',
-        name: track.get('shortLabel'),
-        description: track.get('longLabel'),
-        category: categories,
-        adapter: {
-          type: 'CramAdapter',
-          cramLocation: bigDataLocation,
-          craiLocation: bigDataIndexLocation,
-          sequenceAdapter: sequenceAdapter
-        }
-      };
-
-    case 'gvf':
-      return tracks.generateUnsupportedTrackConf(track.get('shortLabel'), baseTrackType, categories);
-
-    case 'ld2':
-      return tracks.generateUnsupportedTrackConf(track.get('shortLabel'), baseTrackType, categories);
-
-    case 'narrowPeak':
-      return tracks.generateUnsupportedTrackConf(track.get('shortLabel'), baseTrackType, categories);
-
-    case 'bigNarrowPeak':
-      return {
-        type: 'FeatureTrack',
-        name: track.get('shortLabel'),
-        description: track.get('longLabel'),
-        category: categories,
-        adapter: {
-          type: 'BigBedAdapter',
-          bigBedLocation: bigDataLocation
-        }
-      };
-
-    case 'peptideMapping':
-      return tracks.generateUnsupportedTrackConf(track.get('shortLabel'), baseTrackType, categories);
-
-    case 'vcfTabix':
-      if (trackDbFileLocation.uri) {
-        bigDataIndexLocation = track.get('bigDataIndex') ? {
-          uri: new URL(track.get('bigDataIndex'), trackDbFileLocation.uri).href,
-          locationType: 'UriLocation'
-        } : {
-          uri: new URL("".concat(track.get('bigDataUrl'), ".tbi"), trackDbFileLocation.uri).href,
-          locationType: 'UriLocation'
-        };
-      } else {
-        bigDataIndexLocation = track.get('bigDataIndex') ? {
-          localPath: track.get('bigDataIndex'),
-          locationType: 'LocalPathLocation'
-        } : {
-          localPath: "".concat(track.get('bigDataUrl'), ".tbi"),
-          locationType: 'LocalPathLocation'
-        };
-      }
-
-      return {
-        type: 'VariantTrack',
-        name: track.get('shortLabel'),
-        description: track.get('longLabel'),
-        category: categories,
-        adapter: {
-          type: 'VcfTabixAdapter',
-          vcfGzLocation: bigDataLocation,
-          index: {
-            location: bigDataIndexLocation
-          }
-        }
-      };
-
-    case 'wig':
-      return tracks.generateUnsupportedTrackConf(track.get('shortLabel'), baseTrackType, categories);
-
-    case 'wigMaf':
-      return tracks.generateUnsupportedTrackConf(track.get('shortLabel'), baseTrackType, categories);
-
-    case 'hic':
-      return {
-        type: 'HicTrack',
-        name: track.get('shortLabel'),
-        description: track.get('longLabel'),
-        category: categories,
-        adapter: {
-          type: 'HicAdapter',
-          hicLocation: bigDataLocation
-        }
-      };
-
-    case 'halSnake':
-      return tracks.generateUnsupportedTrackConf(track.get('shortLabel'), baseTrackType, categories);
-
-    default:
-      return tracks.generateUnknownTrackConf(track.get('shortLabel'), baseTrackType, categories);
-  }
-}
-
-function UCSCTrackHubConnection(pluginManager) {
-  return mobxStateTree.types.compose('UCSCTrackHubConnection', models.BaseConnectionModelFactory(pluginManager), mobxStateTree.types.model({
-    configuration: configuration.ConfigurationReference(ucscConfigSchema),
-    type: mobxStateTree.types.literal('UCSCTrackHubConnection')
-  }).actions(function (self) {
-    return {
-      connect: function connect() {
-        var connectionName = configuration.getConf(self, 'name');
-        var hubFileLocation = configuration.getConf(self, 'hubTxtLocation');
-        var session = util.getSession(self);
-        fetchHubFile(hubFileLocation).then(function (hubFile) {
-          var genomesFileLocation = hubFileLocation.uri ? {
-            uri: new URL(hubFile.get('genomesFile'), hubFileLocation.uri).href,
-            locationType: 'UriLocation'
-          } : {
-            localPath: hubFile.get('genomesFile'),
-            locationType: 'LocalPathLocation'
-          };
-          return Promise.all([hubFile, fetchGenomesFile(genomesFileLocation)]);
-        }).then(function (_ref) {
-          var _ref2 = _slicedToArray(_ref, 2),
-              hubFile = _ref2[0],
-              genomesFile = _ref2[1];
-
-          var trackDbData = [];
-
-          var _iterator = _createForOfIteratorHelper(genomesFile),
-              _step;
-
-          try {
-            var _loop = function _loop() {
-              var _step$value = _slicedToArray(_step.value, 2),
-                  genomeName = _step$value[0],
-                  genome = _step$value[1];
-
-              var assemblyNames = configuration.getConf(self, 'assemblyNames');
-
-              if (assemblyNames.length > 0 && !assemblyNames.includes(genomeName)) {
-                return "break";
-              }
-
-              var assemblyConf = session.assemblies.find(function (assembly) {
-                return configuration.readConfObject(assembly, 'name') === genomeName;
-              });
-
-              if (!assemblyConf) {
-                throw new Error("Cannot find assembly for \"".concat(genomeName, "\" from the genomes file for connection \"").concat(connectionName, "\""));
-              }
-
-              var trackDbFileLocation = hubFileLocation.uri ? {
-                uri: new URL(genome.get('trackDb'), new URL(hubFile.get('genomesFile'), hubFileLocation.uri)).href,
-                locationType: 'UriLocation'
-              } : {
-                localPath: genome.get('trackDb'),
-                locationType: 'LocalPathLocation'
-              };
-              trackDbData.push(Promise.all([trackDbFileLocation, fetchTrackDbFile(trackDbFileLocation), genomeName, assemblyConf]));
-            };
-
-            for (_iterator.s(); !(_step = _iterator.n()).done;) {
-              var _ret = _loop();
-
-              if (_ret === "break") break;
-            }
-          } catch (err) {
-            _iterator.e(err);
-          } finally {
-            _iterator.f();
-          }
-
-          return Promise.all([].concat(trackDbData));
-        }).then(function (trackDbData) {
-          var _iterator2 = _createForOfIteratorHelper(trackDbData),
-              _step2;
-
-          try {
-            for (_iterator2.s(); !(_step2 = _iterator2.n()).done;) {
-              var _step2$value = _slicedToArray(_step2.value, 4),
-                  trackDbFileLocation = _step2$value[0],
-                  trackDbFile = _step2$value[1],
-                  genomeName = _step2$value[2],
-                  assemblyConf = _step2$value[3];
-
-              var sequenceAdapter = configuration.readConfObject(assemblyConf, ['sequence', 'adapter']);
-              var tracks = generateTracks(trackDbFile, trackDbFileLocation, genomeName, sequenceAdapter);
-              self.addTrackConfs(tracks);
-            }
-          } catch (err) {
-            _iterator2.e(err);
-          } finally {
-            _iterator2.f();
-          }
-        })["catch"](function (error) {
-          console.error(error);
-          session.notify("There was a problem connecting to the UCSC Track Hub \"".concat(self.name, "\". Please make sure you have entered a valid hub.txt file. The error that was thrown is: \"").concat(error, "\""), 'error');
-          session.breakConnection(self.configuration);
-        });
-      }
-    };
-  }));
-}
-
-function isAbsoluteUrl() {
-  var url = arguments.length > 0 && arguments[0] !== undefined ? arguments[0] : '';
-
-  try {
-    new URL(url);
-    return true;
-  } catch (error) {
-    return url.startsWith('/');
-  }
-}
-
-function f(pluginManager) {
-  return mobxStateTree.types.model('AddTrackModel', {
-    id: mst.ElementId,
-    type: mobxStateTree.types.literal('AddTrackWidget'),
-    view: mobxStateTree.types.safeReference(pluginManager.pluggableMstType('view', 'stateModel'))
-  })["volatile"](function () {
-    return {
-      trackSource: 'fromFile',
-      trackData: undefined,
-      indexTrackData: undefined,
-      // alts
-      altAssemblyName: '',
-      altTrackName: '',
-      altTrackType: '',
-      adapterHint: ''
-    };
-  }).actions(function (self) {
-    return {
-      setAdapterHint: function setAdapterHint(obj) {
-        self.adapterHint = obj;
-      },
-      setTrackSource: function setTrackSource(str) {
-        self.trackSource = str;
-      },
-      setTrackData: function setTrackData(obj) {
-        self.trackData = obj;
-      },
-      setIndexTrackData: function setIndexTrackData(obj) {
-        self.indexTrackData = obj;
-      },
-      setAssembly: function setAssembly(str) {
-        self.altAssemblyName = str;
-      },
-      setTrackName: function setTrackName(str) {
-        self.altTrackName = str;
-      },
-      setTrackType: function setTrackType(str) {
-        self.altTrackType = str;
-      },
-      clearData: function clearData() {
-        self.trackSource = '';
-        self.altTrackName = '';
-        self.altTrackType = '';
-        self.altAssemblyName = '';
-        self.adapterHint = '';
-        self.indexTrackData = undefined;
-        self.trackData = undefined;
-      }
-    };
-  }).views(function (self) {
-    return {
-      get trackAdapter() {
-        var trackData = self.trackData,
-            indexTrackData = self.indexTrackData,
-            adapterHint = self.adapterHint;
-        return trackData ? tracks.guessAdapter(trackData, indexTrackData, adapterHint, self) : undefined;
-      },
-
-      get trackName() {
-        return self.altTrackName || (self.trackData ? tracks.getFileName(self.trackData) : '');
-      },
-
-      get isFtp() {
-        var _index$uri, _track$uri;
-
-        var track = self.trackData,
-            index = self.indexTrackData;
-        return !!( // @ts-ignore
-        index !== null && index !== void 0 && (_index$uri = index.uri) !== null && _index$uri !== void 0 && _index$uri.startsWith('ftp://') || track !== null && track !== void 0 && (_track$uri = track.uri) !== null && _track$uri !== void 0 && _track$uri.startsWith('ftp://'));
-      },
-
-      get isRelativeTrackUrl() {
-        var _self$trackData;
-
-        // @ts-ignore
-        var uri = (_self$trackData = self.trackData) === null || _self$trackData === void 0 ? void 0 : _self$trackData.uri;
-        return uri ? !isAbsoluteUrl(uri) : false;
-      },
-
-      get isRelativeIndexUrl() {
-        var _self$indexTrackData;
-
-        // @ts-ignore
-        var uri = (_self$indexTrackData = self.indexTrackData) === null || _self$indexTrackData === void 0 ? void 0 : _self$indexTrackData.uri;
-        return uri ? !isAbsoluteUrl(uri) : false;
-      },
-
-      get isRelativeUrl() {
-        return this.isRelativeIndexUrl || this.isRelativeTrackUrl;
-      },
-
-      get trackHttp() {
-        var _self$trackData2, _self$trackData2$uri;
-
-        // @ts-ignore
-        return (_self$trackData2 = self.trackData) === null || _self$trackData2 === void 0 ? void 0 : (_self$trackData2$uri = _self$trackData2.uri) === null || _self$trackData2$uri === void 0 ? void 0 : _self$trackData2$uri.startsWith('http://');
-      },
-
-      get indexHttp() {
-        var _self$indexTrackData2, _self$indexTrackData3;
-
-        // @ts-ignore
-        return (_self$indexTrackData2 = self.indexTrackData) === null || _self$indexTrackData2 === void 0 ? void 0 : (_self$indexTrackData3 = _self$indexTrackData2.uri) === null || _self$indexTrackData3 === void 0 ? void 0 : _self$indexTrackData3.startsWith('http://');
-      },
-
-      get wrongProtocol() {
-        return window.location.protocol === 'https:' && (this.trackHttp || this.indexHttp);
-      },
-
-      get unsupported() {
-        var _this$trackAdapter;
-
-        return ((_this$trackAdapter = this.trackAdapter) === null || _this$trackAdapter === void 0 ? void 0 : _this$trackAdapter.type) === tracks.UNSUPPORTED;
-      },
-
-      get assembly() {
-        var _self$view$assemblyNa;
-
-        return self.altAssemblyName || ((_self$view$assemblyNa = self.view.assemblyNames) === null || _self$view$assemblyNa === void 0 ? void 0 : _self$view$assemblyNa[0]);
-      },
-
-      get trackType() {
-        return self.altTrackType || (this.trackAdapter ? tracks.guessTrackType(this.trackAdapter.type, self) : '');
-      }
-
-    };
-  }).views(function (self) {
-    return {
-      get warningMessage() {
-        if (self.isFtp) {
-          return "Warning: JBrowse cannot access files using the ftp protocol";
-        } else if (self.isRelativeUrl) {
-          return "Warning: one or more of your files do not provide the protocol e.g.\n          https://, please provide an absolute URL unless you are sure a\n          relative URL is intended.";
-        } else if (self.wrongProtocol) {
-          return "Warning: You entered a http:// resources but we cannot access HTTP\n          resources from JBrowse when it is running on https. Please use an\n          https URL for your track, or access the JBrowse app from the http\n          protocol";
-        }
-
-        return '';
-      }
-
-    };
-  });
-}
-
-var configSchema = /*#__PURE__*/configuration.ConfigurationSchema('AddTrackWidget', {});
-
-var AddConnectionStateModel = /*#__PURE__*/mobxStateTree.types.model('AddConnectionModel', {
-  id: mst.ElementId,
-  type: /*#__PURE__*/mobxStateTree.types.literal('AddConnectionWidget')
-});
-
-var configSchema$1 = /*#__PURE__*/configuration.ConfigurationSchema('AddConnectionWidget', {});
-
-var hasAnyOverlap = function hasAnyOverlap() {
-  var a1 = arguments.length > 0 && arguments[0] !== undefined ? arguments[0] : [];
-  var a2 = arguments.length > 1 && arguments[1] !== undefined ? arguments[1] : [];
-  return !!a1.find(function (value) {
-    return a2.includes(value);
-  });
-};
-
-function passesFilter(filter, config) {
-  var name = getTrackName(config);
-  var categories = configuration.readConfObject(config, 'category') || [];
-  var filterLower = filter.toLowerCase();
-  return !!name.toLowerCase().includes(filterLower) || categories.filter(function (cat) {
-    return !!cat.toLowerCase().includes(filterLower);
-  }).length;
-}
-
-function getTrackName(config) {
-  if (!config.trackId) {
-    throw new Error('not a track');
-  }
-
-  return configuration.readConfObject(config, 'name') || "Reference sequence (".concat(configuration.readConfObject(mobxStateTree.getParent(config), 'name'), ")");
-}
-
-function generateHierarchy(model, trackConfigurations, collapsed) {
-  var hierarchy = {
-    children: []
-  };
-  var filterText = model.filterText,
-      view = model.view;
-  trackConfigurations.filter(function (trackConf) {
-    return passesFilter(filterText, trackConf);
-  }).forEach(function (trackConf) {
-    // copy the categories since this array can be mutated downstream
-    var categories = _toConsumableArray(configuration.readConfObject(trackConf, 'category') || []); // silly thing where if trackId ends with sessionTrack, then push it to
-    // a category that starts with a space to force sort to the top...
-    // double whammy hackyness
-
-
-    if (trackConf.trackId.endsWith('sessionTrack')) {
-      categories.unshift(' Session tracks');
-    }
-
-    var currLevel = hierarchy; // find existing category to put track into or create it
-
-    var _loop = function _loop(i) {
-      var category = categories[i];
-      var ret = currLevel.children.find(function (c) {
-        return c.name === category;
-      });
-      var id = categories.slice(0, i + 1).join(',');
-
-      if (!ret) {
-        var n = {
-          children: [],
-          name: category,
-          id: id,
-          isOpenByDefault: !collapsed.get(id)
-        };
-        currLevel.children.push(n);
-        currLevel = n;
-      } else {
-        currLevel = ret;
-      }
-    };
-
-    for (var i = 0; i < categories.length; i++) {
-      _loop(i);
-    } // using splice here tries to group leaf nodes above hierarchical nodes
-
-
-    currLevel.children.splice(currLevel.children.findIndex(function (elt) {
-      return elt.children.length;
-    }), 0, {
-      id: trackConf.trackId,
-      name: getTrackName(trackConf),
-      conf: trackConf,
-      checked: !!view.tracks.find(function (f) {
-        return f.configuration === trackConf;
-      }),
-      children: []
-    });
-  });
-  return hierarchy.children;
-}
-var HierarchicalTrackSelectorStateModelFactory = (function (pluginManager) {
-  return mobxStateTree.types.model('HierarchicalTrackSelectorWidget', {
-    id: mst.ElementId,
-    type: mobxStateTree.types.literal('HierarchicalTrackSelectorWidget'),
-    collapsed: mobxStateTree.types.map(mobxStateTree.types["boolean"]),
-    filterText: '',
-    view: mobxStateTree.types.safeReference(pluginManager.pluggableMstType('view', 'stateModel'))
-  }).actions(function (self) {
-    return {
-      setView: function setView(view) {
-        self.view = view;
-      },
-      toggleCategory: function toggleCategory(pathName) {
-        self.collapsed.set(pathName, !self.collapsed.get(pathName));
-      },
-      clearFilterText: function clearFilterText() {
-        self.filterText = '';
-      },
-      setFilterText: function setFilterText(newText) {
-        self.filterText = newText;
-      }
-    };
-  }).views(function (self) {
-    return {
-      getRefSeqTrackConf: function getRefSeqTrackConf(assemblyName) {
-        var _getSession = util.getSession(self),
-            assemblyManager = _getSession.assemblyManager;
-
-        var assembly = assemblyManager.get(assemblyName);
-        var trackConf = assembly === null || assembly === void 0 ? void 0 : assembly.configuration.sequence;
-        var viewType = pluginManager.getViewType(self.view.type);
-
-        if (trackConf) {
-          var _iterator = _createForOfIteratorHelper(trackConf.displays),
-              _step;
-
-          try {
-            var _loop2 = function _loop2() {
-              var display = _step.value;
-
-              if (viewType.displayTypes.find(function (displayType) {
-                return displayType.name === display.type;
-              })) {
-                return {
-                  v: trackConf
-                };
-              }
-            };
-
-            for (_iterator.s(); !(_step = _iterator.n()).done;) {
-              var _ret = _loop2();
-
-              if (_typeof(_ret) === "object") return _ret.v;
-            }
-          } catch (err) {
-            _iterator.e(err);
-          } finally {
-            _iterator.f();
-          }
-        }
-
-        return undefined;
-      },
-      trackConfigurations: function trackConfigurations(assemblyName) {
-        if (!self.view) {
-          return [];
-        }
-
-        var session = util.getSession(self);
-        var trackConfigurations = session.tracks,
-            assemblyManager = session.assemblyManager;
-        var assembly = assemblyManager.get(assemblyName);
-
-        if (!assembly) {
-          return [];
-        }
-
-        var refseq = self.getRefSeqTrackConf(assemblyName); // filter out tracks that don't match the current assembly (check all
-        // assembly aliases) and display types
-
-        return (refseq ? [refseq] : []).concat(_toConsumableArray(trackConfigurations.filter(function (conf) {
-          var trackConfAssemblies = configuration.readConfObject(conf, 'assemblyNames');
-          var allAliases = assembly.allAliases;
-          return hasAnyOverlap(allAliases, trackConfAssemblies);
-        }).filter(function (conf) {
-          var _pluginManager$getVie = pluginManager.getViewType(self.view.type),
-              displayTypes = _pluginManager$getVie.displayTypes;
-
-          var compatibleDisplays = displayTypes.map(function (display) {
-            return display.name;
-          });
-          var trackDisplays = conf.displays.map(function (display) {
-            return display.type;
-          });
-          return hasAnyOverlap(compatibleDisplays, trackDisplays);
-        })));
-      },
-
-      get assemblyNames() {
-        return self.view ? self.view.assemblyNames : [];
-      },
-
-      connectionTrackConfigurations: function connectionTrackConfigurations(assemblyName, connection) {
-        if (!self.view) {
-          return [];
-        }
-
-        var trackConfigurations = connection.tracks;
-        var session = util.getSession(self);
-        var assemblyManager = session.assemblyManager;
-        var assembly = assemblyManager.get(assemblyName);
-
-        if (!(assembly && assembly.initialized)) {
-          return [];
-        } // filter out tracks that don't match the current display types
-
-
-        return trackConfigurations.filter(function (conf) {
-          var trackConfAssemblies = configuration.readConfObject(conf, 'assemblyNames');
-          var allAliases = assembly.allAliases;
-          return hasAnyOverlap(allAliases, trackConfAssemblies);
-        }).filter(function (conf) {
-          var _pluginManager$getVie2 = pluginManager.getViewType(self.view.type),
-              displayTypes = _pluginManager$getVie2.displayTypes;
-
-          var compatibleDisplays = displayTypes.map(function (display) {
-            return display.name;
-          });
-          var trackDisplays = conf.displays.map(function (display) {
-            return display.type;
-          });
-          return hasAnyOverlap(compatibleDisplays, trackDisplays);
-        });
-      },
-      hierarchy: function hierarchy(assemblyName) {
-        var _this = this;
-
-        var hier = generateHierarchy(self, self.trackConfigurations(assemblyName), self.collapsed);
-        var session = util.getSession(self);
-        var conns = session.connectionInstances.filter(function (conn) {
-          var configAssemblyNames = configuration.readConfObject(conn.configuration, 'assemblyNames');
-
-          if (configAssemblyNames.length === 0) {
-            return true;
-          }
-
-          return configAssemblyNames.includes(assemblyName);
-        }).map(function (conn, index) {
-          var c = session.connections[index];
-          return {
-            id: c.connectionId,
-            name: configuration.readConfObject(c, 'name'),
-            children: _this.connectionHierarchy(assemblyName, conn),
-            state: {
-              expanded: true
-            }
-          };
-        });
-        return {
-          name: 'Root',
-          id: 'Root',
-          children: [{
-            name: 'Tracks',
-            id: 'Tracks',
-            children: hier
-          }].concat(_toConsumableArray(conns))
-        };
-      },
-      connectionHierarchy: function connectionHierarchy(assemblyName, connection) {
-        return generateHierarchy(self, self.connectionTrackConfigurations(assemblyName, connection), self.collapsed);
-      },
-      // This recursively gets tracks from lower paths
-      allTracksInCategoryPath: function allTracksInCategoryPath(path, connection, assemblyName) {
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-var configSchema$2 = /*#__PURE__*/configuration.ConfigurationSchema('HierarchicalTrackSelectorWidget', {});
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-      right: 0,
-      top: 0
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-  var classes = useStyles();
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-    title: "This plugin was installed by an administrator, you cannot remove it."
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-function PluginDialog(_ref) {
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-  var classes = useStyles();
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-function InstalledPlugin(_ref2) {
-  var plugin = _ref2.plugin,
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-
-  var _useState = React.useState(),
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-  var session = util.getSession(model);
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-    return pluginManager.pluginMetadata[plugin.name].url === p.url;
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-
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-var InstalledPlugin$1 = /*#__PURE__*/mobxReact.observer(InstalledPlugin);
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-function InstalledPluginsList(_ref) {
-  var pluginManager = _ref.pluginManager,
-      model = _ref.model;
-  var plugins = pluginManager.plugins;
-  var corePlugins = plugins.filter(function (p) {
-    var _pluginManager$plugin;
-
-    return (_pluginManager$plugin = pluginManager.pluginMetadata[p.name]) === null || _pluginManager$plugin === void 0 ? void 0 : _pluginManager$plugin.isCore;
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-  });
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-    return plugin.name.toLowerCase().includes(model.filterText.toLowerCase());
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-var InstalledPluginsList$1 = /*#__PURE__*/mobxReact.observer(InstalledPluginsList);
-
-var useStyles$1 = /*#__PURE__*/core.makeStyles(function () {
-  return {
-    card: {
-      margin: '1em'
-    },
-    icon: {
-      marginLeft: '0.5em',
-      marginRight: '0.5em'
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-    bold: {
-      fontWeight: 600
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-    dataField: {
-      display: 'flex',
-      alignItems: 'center',
-      margin: '0.4em 0em'
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-function PluginCard(_ref) {
-  var plugin = _ref.plugin,
-      model = _ref.model,
-      adminMode = _ref.adminMode;
-  var classes = useStyles$1();
-  var session = util.getSession(model);
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-  var _getEnv = mobxStateTree.getEnv(model),
-      pluginManager = _getEnv.pluginManager;
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-  var isInstalled = Boolean(pluginManager.runtimePluginDefinitions.find(function (pluginDefinition) {
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-  var _useState = React.useState(false),
-      _useState2 = _slicedToArray(_useState, 2),
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-  var jbrowse = rootModel.jbrowse;
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-    key: plugin.name,
-    className: classes.card
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-    className: classes.dataField
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-    className: classes.dataField
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-        session.addSessionPlugin(plugin);
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-
-      setTempDisabled(true);
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-}
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-var PluginCard$1 = /*#__PURE__*/mobxReact.observer(PluginCard);
-
-var useStyles$2 = /*#__PURE__*/core.makeStyles(function (theme) {
-  return {
-    closeButton: {
-      position: 'absolute',
-      right: theme.spacing(1),
-      top: theme.spacing(1)
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-    dialogContent: {
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-    expandOpen: {
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-function CustomPluginForm(_ref) {
-  var open = _ref.open,
-      onClose = _ref.onClose,
-      model = _ref.model;
-  var classes = useStyles$2();
-
-  var _useState = React.useState(''),
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-
-  var _useState3 = React.useState(''),
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-
-  var _useState5 = React.useState(''),
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-      esmPluginUrl = _useState6[0],
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-
-  var _useState7 = React.useState(''),
-      _useState8 = _slicedToArray(_useState7, 2),
-      cjsPluginUrl = _useState8[0],
-      setCJSPluginUrl = _useState8[1];
-
-  var _useState9 = React.useState(false),
-      _useState10 = _slicedToArray(_useState9, 2),
-      advancedOptionsOpen = _useState10[0],
-      setAdvancedOptionsOpen = _useState10[1];
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-  function handleChange(event) {
-    var _event$target = event.target,
-        name = _event$target.name,
-        value = _event$target.value;
-
-    if (name === 'umdName') {
-      setUMDPluginName(value);
-    }
-
-    if (name === 'umdUrl') {
-      setUMDPluginUrl(value);
-    }
-
-    if (name === 'esmUrl') {
-      setESMPluginUrl(value);
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-
-    if (name === 'cjsUrl') {
-      setCJSPluginUrl(value);
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-
-  function handleOpenAdvancedOptions() {
-    setAdvancedOptionsOpen(!advancedOptionsOpen);
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-  var rootModel = mobxStateTree.getRoot(model);
-  var jbrowse = rootModel.jbrowse;
-  var ready = Boolean(umdPluginName && umdPluginUrl || esmPluginUrl || cjsPluginUrl);
-
-  function handleSubmit() {
-    if (!ready) {
-      return;
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-    var pluginDefinition = {};
-
-    if (umdPluginName && umdPluginUrl) {
-      pluginDefinition.name = umdPluginName;
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-    }
-
-    if (esmPluginUrl) {
-      pluginDefinition.esmUrl = esmPluginUrl;
-    }
-
-    if (cjsPluginUrl) {
-      pluginDefinition.cjsUrl = cjsPluginUrl;
-    }
-
-    jbrowse.addPlugin(pluginDefinition);
-  }
-
-  function handleClose() {
-    setUMDPluginName('');
-    setUMDPluginUrl('');
-    setESMPluginUrl('');
-    setCJSPluginUrl('');
-    onClose();
-  }
-
-  return /*#__PURE__*/React__default.createElement(core.Dialog, {
-    open: open,
-    onClose: handleClose
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-    size: "medium",
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-    onClick: function onClick() {
-      return onClose();
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-    onSubmit: handleSubmit
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-    className: classes.dialogContent
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-    id: "umd-name-input",
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-    label: "Plugin name",
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-    value: umdPluginName,
-    onChange: handleChange
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-    onChange: handleChange
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-    onClick: handleOpenAdvancedOptions
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-    className: clsx(classes.expand, _defineProperty({}, classes.expandOpen, advancedOptionsOpen)),
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-    "aria-label": "show more"
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-    "in": advancedOptionsOpen
-  }, /*#__PURE__*/React__default.createElement("div", {
-    className: classes.dialogContent
-  }, /*#__PURE__*/React__default.createElement(core.DialogContentText, null, "The above fields assume that the plugin is built in UMD format. If your plugin is in another format, or you have additional builds you want to add (such as a CJS build for using NodeJS APIs in desktop), you can enter the URLs for those builds below."), /*#__PURE__*/React__default.createElement(core.TextField, {
-    id: "esm-url-input",
-    name: "esmUrl",
-    label: "ESM build URL",
-    variant: "outlined",
-    value: esmPluginUrl,
-    onChange: handleChange
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-    id: "cjs-url-input",
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-    label: "CJS build URL",
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-    value: cjsPluginUrl,
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-    variant: "contained",
-    onClick: handleClose
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-    variant: "contained",
-    color: "primary",
-    onClick: handleSubmit,
-    disabled: !ready
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-var CustomPluginForm$1 = /*#__PURE__*/mobxReact.observer(CustomPluginForm);
-
-var useStyles$3 = /*#__PURE__*/core.makeStyles(function (theme) {
-  return {
-    root: {
-      margin: theme.spacing(1)
-    },
-    expandIcon: {
-      color: '#fff'
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-    adminBadge: {
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-      // this is the quaternary color in JB2 palette
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-      padding: '1em',
-      display: 'flex',
-      alignContent: 'center'
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-    customPluginButton: {
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-function PluginStoreWidget(_ref) {
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-
-  var _useState = React.useState(),
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-      pluginArray = _useState2[0],
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-  var _useState5 = React.useState(false),
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-  var _getSession = util.getSession(model),
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-  var _getEnv = mobxStateTree.getEnv(model),
-      pluginManager = _getEnv.pluginManager;
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-  React.useEffect(function () {
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-            case 7:
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-            case 9:
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-              _context.next = 19;
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-    model: model
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-    value: model.filterText,
-    onChange: function onChange(event) {
-      return model.setFilterText(event.target.value);
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-    fullWidth: true,
-    InputProps: {
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-    variant: "h5"
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-    style: {
-      margin: '1em'
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-    model: model
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-    defaultExpanded: true
-  }, /*#__PURE__*/React__default.createElement(core.AccordionSummary, {
-    expandIcon: /*#__PURE__*/React__default.createElement(ExpandMoreIcon, {
-      className: classes.expandIcon
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-  }, /*#__PURE__*/React__default.createElement(core.Typography, {
-    variant: "h5"
-  }, "Available plugins")), error ? /*#__PURE__*/React__default.createElement(core.Typography, {
-    color: "error"
-  }, "".concat(error)) : pluginArray ? pluginArray.filter(function (plugin) {
-    // If pugin only has cjsUrl, don't display outside desktop
-    if (!util.isElectron && !(plugin.esmUrl || plugin.url || plugin.umdUrl)) {
-      return false;
-    }
-
-    return plugin.name.toLowerCase().includes(model.filterText.toLowerCase());
-  }).map(function (plugin) {
-    return /*#__PURE__*/React__default.createElement(PluginCard$1, {
-      key: plugin.name,
-      plugin: plugin,
-      model: model,
-      adminMode: !!adminMode
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-
-var PluginStoreWidget$1 = /*#__PURE__*/mobxReact.observer(PluginStoreWidget);
-
-var PluginStoreWidget$2 = {
-  __proto__: null,
-  'default': PluginStoreWidget$1
-};
-
-function f$1(pluginManager) {
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-    return {
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-        self.filterText = newText;
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-var configSchema$3 = /*#__PURE__*/configuration.ConfigurationSchema('PluginStoreWidget', {});
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-var SetDefaultSession = /*#__PURE__*/React.lazy(function () {
-  return Promise.resolve().then(function () { return index; });
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-var AssemblyManager = /*#__PURE__*/React.lazy(function () {
-  return Promise.resolve().then(function () { return index$1; });
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-var _default = /*#__PURE__*/function (_Plugin) {
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-  var _super = /*#__PURE__*/_createSuper(_default);
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-  function _default() {
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-    _classCallCheck(this, _default);
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-    _this = _super.apply(this, arguments);
-    _this.name = 'DataManagementPlugin';
-    _this.exports = {
-      AssemblyManager: AssemblyManager,
-      SetDefaultSession: SetDefaultSession
-    };
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-  }
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-  _createClass(_default, [{
-    key: "install",
-    value: function install(pluginManager) {
-      pluginManager.addConnectionType(function () {
-        return new ConnectionType({
-          name: 'UCSCTrackHubConnection',
-          configSchema: ucscConfigSchema,
-          stateModel: UCSCTrackHubConnection(pluginManager),
-          displayName: 'UCSC Track Hub',
-          description: 'A track or assembly hub in the Track Hub format',
-          url: '//genome.ucsc.edu/goldenPath/help/hgTrackHubHelp.html#Intro'
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-        return new WidgetType({
-          name: 'HierarchicalTrackSelectorWidget',
-          heading: 'Available tracks',
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-            return Promise.resolve().then(function () { return HierarchicalTrackSelector$1; });
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-          heading: 'Add a track',
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-            return Promise.resolve().then(function () { return AddTrackWidget$2; });
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-        return new WidgetType({
-          name: 'AddConnectionWidget',
-          heading: 'Add a connection',
-          configSchema: configSchema$1,
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-          ReactComponent: /*#__PURE__*/React.lazy(function () {
-            return Promise.resolve().then(function () { return AddConnectionWidget$2; });
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-        return new WidgetType({
-          name: 'PluginStoreWidget',
-          heading: 'Plugin store',
-          configSchema: configSchema$3,
-          stateModel: f$1(pluginManager),
-          ReactComponent: /*#__PURE__*/React.lazy(function () {
-            return Promise.resolve().then(function () { return PluginStoreWidget$2; });
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-    key: "configure",
-    value: function configure(pluginManager) {}
-  }]);
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-  return _default;
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-function canSetDefaultSession(obj) {
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-var SetDefaultSession$1 = /*#__PURE__*/mobxReact.observer(function (_ref) {
-  var rootModel = _ref.rootModel,
-      onClose = _ref.onClose;
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-
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-  function removeAssembly(name) {
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-    var name = configuration.readConfObject(assembly, 'name');
-    var displayName = configuration.readConfObject(assembly, 'displayName');
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-      className: classes.buttonCell
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-      "data-testid": "".concat(name, "-edit"),
-      className: classes.button,
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-        setIsAssemblyBeingEdited(true);
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-      color: "primary"
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-      "data-testid": "".concat(name, "-delete"),
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-      margin: "".concat(theme.spacing(1), "px auto"),
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-      marginTop: '1em',
-      justifyContent: 'center'
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-      flex: 'auto',
-      margin: "".concat(theme.spacing(1), "px auto"),
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-  var adapterSelection = _ref.adapterSelection,
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-      adapterTypes = _ref.adapterTypes;
-  return /*#__PURE__*/React__default.createElement(core.TextField, {
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-      setGziLocation = _ref2.setGziLocation,
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-      setTwoBitLocation = _ref2.setTwoBitLocation,
-      chromSizesLocation = _ref2.chromSizesLocation,
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-      container: true,
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-      item: true
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-      name: "gziLocation",
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-      spacing: 2
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-      item: true
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-  return null;
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-var blank = {
-  uri: ''
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-      setFormOpen = _ref3.setFormOpen;
-  var classes = useStyles$5();
-  var adapterTypes = ['IndexedFastaAdapter', 'BgzipFastaAdapter', 'TwoBitAdapter'];
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-  var _useState = React.useState(''),
-      _useState2 = _slicedToArray(_useState, 2),
-      assemblyName = _useState2[0],
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-  var _useState3 = React.useState(''),
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-      _useState8 = _slicedToArray(_useState7, 2),
-      fastaLocation = _useState8[0],
-      setFastaLocation = _useState8[1];
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-  var _useState9 = React.useState(blank),
-      _useState10 = _slicedToArray(_useState9, 2),
-      faiLocation = _useState10[0],
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-  var _useState11 = React.useState(blank),
-      _useState12 = _slicedToArray(_useState11, 2),
-      gziLocation = _useState12[0],
-      setGziLocation = _useState12[1];
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-  var _useState13 = React.useState(blank),
-      _useState14 = _slicedToArray(_useState13, 2),
-      twoBitLocation = _useState14[0],
-      setTwoBitLocation = _useState14[1];
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-  var _useState15 = React.useState(blank),
-      _useState16 = _slicedToArray(_useState15, 2),
-      chromSizesLocation = _useState16[0],
-      setChromSizesLocation = _useState16[1];
-
-  function createAssembly() {
-    if (assemblyName === '') {
-      rootModel.session.notify("Can't create an assembly without a name");
-    } else {
-      setFormOpen(false);
-      var newAssembly;
-
-      if (adapterSelection === 'IndexedFastaAdapter') {
-        newAssembly = {
-          name: assemblyName,
-          displayName: assemblyDisplayName,
-          sequence: {
-            adapter: {
-              type: 'IndexedFastaAdapter',
-              fastaLocation: fastaLocation,
-              faiLocation: faiLocation
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-          }
-        };
-      } else if (adapterSelection === 'BgzipFastaAdapter') {
-        newAssembly = {
-          name: assemblyName,
-          displayName: assemblyDisplayName,
-          sequence: {
-            adapter: {
-              type: 'BgzipFastaAdapter',
-              fastaLocation: fastaLocation,
-              faiLocation: faiLocation,
-              gziLocation: gziLocation
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-        newAssembly = {
-          name: assemblyName,
-          displayName: assemblyDisplayName,
-          sequence: {
-            adapter: {
-              type: 'TwoBitAdapter',
-              twoBitLocation: twoBitLocation,
-              chromSizesLocation: chromSizesLocation
-            }
-          }
-        };
-      }
-
-      rootModel.jbrowse.addAssemblyConf(newAssembly);
-      rootModel.session.notify("Successfully added ".concat(assemblyName, " assembly to JBrowse 2"), 'success');
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-
-  return /*#__PURE__*/React__default.createElement("div", {
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-  }, /*#__PURE__*/React__default.createElement(core.Paper, {
-    className: classes.paper
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-    id: "assembly-name",
-    inputProps: {
-      'data-testid': 'assembly-name'
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-    label: "Assembly name",
-    helperText: "The assembly name e.g. hg38",
-    variant: "outlined",
-    value: assemblyName,
-    onChange: function onChange(event) {
-      return setAssemblyName(event.target.value);
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-    id: "assembly-name",
-    inputProps: {
-      'data-testid': 'assembly-display-name'
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-    label: "Assembly display name",
-    helperText: 'A human readable display name for the assembly e.g. "Homo sapiens (hg38)"',
-    variant: "outlined",
-    value: assemblyDisplayName,
-    onChange: function onChange(event) {
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-    adapterSelection: adapterSelection,
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-    setFaiLocation: setFaiLocation,
-    gziLocation: gziLocation,
-    setGziLocation: setGziLocation,
-    twoBitLocation: twoBitLocation,
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-    onClick: createAssembly
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-var AssemblyEditor = /*#__PURE__*/mobxReact.observer(function (_ref) {
-  var assembly = _ref.assembly;
-  return /*#__PURE__*/React__default.createElement(pluginConfig.ConfigurationEditor, {
-    model: {
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-var useStyles$6 = /*#__PURE__*/styles.makeStyles(function (theme) {
-  return {
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-      color: '#fff',
-      backgroundColor: theme.palette.primary.main,
-      textAlign: 'center'
-    },
-    dialogContent: {
-      width: '100%'
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-      position: 'absolute',
-      left: theme.spacing(4),
-      top: theme.spacing(4)
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-    closeButton: {
-      position: 'absolute',
-      right: theme.spacing(1),
-      top: theme.spacing(1),
-      color: theme.palette.grey[500]
-    }
-  };
-});
-var AssemblyManager$1 = /*#__PURE__*/mobxReact.observer(function (_ref) {
-  var rootModel = _ref.rootModel,
-      _onClose = _ref.onClose;
-  var classes = useStyles$6();
-
-  var _useState = React.useState(false),
-      _useState2 = _slicedToArray(_useState, 2),
-      isFormOpen = _useState2[0],
-      setFormOpen = _useState2[1];
-
-  var _useState3 = React.useState(false),
-      _useState4 = _slicedToArray(_useState3, 2),
-      isAssemblyBeingEdited = _useState4[0],
-      setIsAssemblyBeingEdited = _useState4[1];
-
-  var _useState5 = React.useState(),
-      _useState6 = _slicedToArray(_useState5, 2),
-      assemblyBeingEdited = _useState6[0],
-      setAssemblyBeingEdited = _useState6[1];
-
-  var showAssemblyTable = !isFormOpen && !isAssemblyBeingEdited;
-  return /*#__PURE__*/React__default.createElement(core.Dialog, {
-    open: true,
-    onClose: function onClose() {
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-    className: classes.titleBox
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-    "aria-label": "back",
-    className: classes.backButton,
-    onClick: function onClick() {
-      return setFormOpen(false);
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-  }, /*#__PURE__*/React__default.createElement(ArrowBackIosIcon, null)), "Add new assembly") : null, isAssemblyBeingEdited ? /*#__PURE__*/React__default.createElement(React__default.Fragment, null, /*#__PURE__*/React__default.createElement(core.IconButton, {
-    "aria-label": "back",
-    className: classes.backButton,
-    onClick: function onClick() {
-      return setIsAssemblyBeingEdited(false);
-    }
-  }, /*#__PURE__*/React__default.createElement(ArrowBackIosIcon, null)), returnAssemblyName(assemblyBeingEdited)) : null, /*#__PURE__*/React__default.createElement(core.IconButton, {
-    "aria-label": "close",
-    className: classes.closeButton,
-    onClick: function onClick() {
-      return _onClose(false);
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-  }, /*#__PURE__*/React__default.createElement(CloseIcon, null))), /*#__PURE__*/React__default.createElement(core.DialogContent, null, /*#__PURE__*/React__default.createElement("div", {
-    className: classes.dialogContent
-  }, showAssemblyTable ? /*#__PURE__*/React__default.createElement(AssemblyTable, {
-    rootModel: rootModel,
-    setIsAssemblyBeingEdited: setIsAssemblyBeingEdited,
-    setAssemblyBeingEdited: setAssemblyBeingEdited
-  }) : null, isAssemblyBeingEdited ? /*#__PURE__*/React__default.createElement(AssemblyEditor, {
-    assembly: assemblyBeingEdited
-  }) : null, isFormOpen ? /*#__PURE__*/React__default.createElement(AssemblyAddForm, {
-    rootModel: rootModel,
-    setFormOpen: setFormOpen
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-    color: "secondary",
-    variant: "contained",
-    onClick: function onClick() {
-      return _onClose(false);
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-  }, "Close"), /*#__PURE__*/React__default.createElement(core.Button, {
-    variant: "contained",
-    color: "secondary",
-    startIcon: /*#__PURE__*/React__default.createElement(AddIcon, null),
-    onClick: function onClick() {
-      return setFormOpen(true);
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-}); // eslint-disable-next-line @typescript-eslint/no-explicit-any
-
-function returnAssemblyName(assembly) {
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-    return assembly.name;
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-
-  return null;
-}
-
-
-
-var index$1 = {
-  __proto__: null,
-  'default': AssemblyManager$1
-};
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-var CloseConnectionDialog = /*#__PURE__*/React.lazy(function () {
-  return Promise.resolve().then(function () { return CloseConnectionDialog$3; });
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-var DeleteConnectionDialog = /*#__PURE__*/React.lazy(function () {
-  return Promise.resolve().then(function () { return DeleteConnectionDialog$3; });
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-  return Promise.resolve().then(function () { return ManageConnectionsDialog$2; });
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-var ToggleConnectionsDialog = /*#__PURE__*/React.lazy(function () {
-  return Promise.resolve().then(function () { return ToggleConnectionsDialog$2; });
-});
-var useStyles$7 = /*#__PURE__*/core.makeStyles(function (theme) {
-  var _theme$palette$tertia, _theme$palette$tertia2;
-
-  return {
-    searchBox: {
-      margin: theme.spacing(2)
-    },
-    menuIcon: {
-      marginRight: theme.spacing(1),
-      marginBottom: 0
-    },
-    fab: {
-      position: 'absolute',
-      bottom: theme.spacing(6),
-      right: theme.spacing(6)
-    },
-    compactCheckbox: {
-      padding: 0
-    },
-    checkboxLabel: {
-      marginRight: 0,
-      '&:hover': {
-        backgroundColor: '#eee'
-      }
-    },
-    // this accordionBase element's small padding is used to give a margin to
-    // accordionColor it a "margin" because the virtualized elements can't really
-    // use margin in a conventional way (it doesn't affect layout)
-    accordionBase: {
-      display: 'flex'
-    },
-    accordionCard: {
-      padding: 3,
-      cursor: 'pointer',
-      display: 'flex'
-    },
-    nestingLevelMarker: {
-      position: 'absolute',
-      borderLeft: '1.5px solid #555'
-    },
-    // accordionColor set's display:flex so that the child accordionText use
-    // vertically centered text
-    accordionColor: {
-      background: (_theme$palette$tertia = theme.palette.tertiary) === null || _theme$palette$tertia === void 0 ? void 0 : _theme$palette$tertia.main,
-      color: (_theme$palette$tertia2 = theme.palette.tertiary) === null || _theme$palette$tertia2 === void 0 ? void 0 : _theme$palette$tertia2.contrastText,
-      width: '100%',
-      display: 'flex',
-      paddingLeft: 5
-    },
-    // margin:auto 0 to center text vertically
-    accordionText: {
-      margin: 'auto 0'
-    }
-  };
-}); // An individual node in the track selector. Note: manually sets cursor:
-// pointer improves usability for what can be clicked
-
-var Node = function Node(props) {
-  var data = props.data,
-      isOpen = props.isOpen,
-      style = props.style,
-      setOpen = props.setOpen;
-  var isLeaf = data.isLeaf,
-      nestingLevel = data.nestingLevel,
-      checked = data.checked,
-      id = data.id,
-      name = data.name,
-      _onChange = data.onChange,
-      toggleCollapse = data.toggleCollapse,
-      conf = data.conf,
-      onMoreInfo = data.onMoreInfo,
-      drawerPosition = data.drawerPosition;
-  var classes = useStyles$7();
-  var width = 10;
-  var marginLeft = nestingLevel * width + (isLeaf ? width : 0);
-  var unsupported = name && (name.endsWith('(Unsupported)') || name.endsWith('(Unknown)'));
-  var description = conf && configuration.readConfObject(conf, ['description']) || '';
-  return /*#__PURE__*/React__default.createElement("div", {
-    style: style,
-    className: !isLeaf ? classes.accordionBase : undefined
-  }, new Array(nestingLevel).fill(0).map(function (_, idx) {
-    return /*#__PURE__*/React__default.createElement("div", {
-      key: "mark-".concat(idx),
-      style: {
-        left: idx * width + 4,
-        height: style.height
-      },
-      className: classes.nestingLevelMarker
-    });
-  }), /*#__PURE__*/React__default.createElement("div", {
-    className: !isLeaf ? classes.accordionCard : undefined,
-    onClick: function onClick() {
-      toggleCollapse(id);
-      setOpen(!isOpen);
-    },
-    style: {
-      marginLeft: marginLeft,
-      whiteSpace: 'nowrap',
-      width: '100%'
-    }
-  }, /*#__PURE__*/React__default.createElement("div", {
-    className: !isLeaf ? classes.accordionColor : undefined
-  }, !isLeaf ? /*#__PURE__*/React__default.createElement("div", {
-    className: classes.accordionText
-  }, /*#__PURE__*/React__default.createElement(core.Typography, null, isOpen ? /*#__PURE__*/React__default.createElement(ArrowDropDownIcon, null) : /*#__PURE__*/React__default.createElement(ArrowRightIcon, null), name)) : /*#__PURE__*/React__default.createElement(React__default.Fragment, null, /*#__PURE__*/React__default.createElement(core.Tooltip, {
-    title: description,
-    placement: drawerPosition === 'left' ? 'right' : 'left'
-  }, /*#__PURE__*/React__default.createElement(core.FormControlLabel, {
-    className: classes.checkboxLabel,
-    control: /*#__PURE__*/React__default.createElement(core.Checkbox, {
-      className: classes.compactCheckbox,
-      checked: checked,
-      onChange: function onChange() {
-        return _onChange(id);
-      },
-      color: "primary",
-      disabled: unsupported,
-      inputProps: {
-        'data-testid': "htsTrackEntry-".concat(id)
-      }
-    }),
-    label: name
-  })), /*#__PURE__*/React__default.createElement(core.IconButton, {
-    onClick: function onClick(e) {
-      return onMoreInfo({
-        target: e.currentTarget,
-        id: id,
-        conf: conf
-      });
-    },
-    color: "secondary",
-    "data-testid": "htsTrackEntryMenu-".concat(id)
-  }, /*#__PURE__*/React__default.createElement(MoreIcon, null))))));
-};
-
-var getNodeData = function getNodeData(node, nestingLevel, extra) {
-  var isLeaf = !!node.conf;
-  return {
-    data: _objectSpread2(_objectSpread2({
-      defaultHeight: isLeaf ? 22 : 40,
-      isLeaf: isLeaf,
-      isOpenByDefault: true,
-      nestingLevel: nestingLevel
-    }, node), extra),
-    nestingLevel: nestingLevel,
-    node: node
-  };
-}; // this is the main tree component for the hierarchical track selector in note:
-// in jbrowse-web the toolbar is position="sticky" which means the autosizer
-// includes the height of the toolbar, so we subtract the given offsets
-
-
-var HierarchicalTree = /*#__PURE__*/mobxReact.observer(function (_ref) {
-  var _session$getTrackActi;
-
-  var height = _ref.height,
-      tree = _ref.tree,
-      model = _ref.model;
-  var filterText = model.filterText,
-      view = model.view;
-  var treeRef = React.useRef(null);
-
-  var _useState = React.useState(),
-      _useState2 = _slicedToArray(_useState, 2),
-      info = _useState2[0],
-      setMoreInfo = _useState2[1];
-
-  var session = util.getSession(model);
-  var drawerPosition = session.drawerPosition;
-  var extra = React.useMemo(function () {
-    return {
-      onChange: function onChange(trackId) {
-        return view.toggleTrack(trackId);
-      },
-      toggleCollapse: function toggleCollapse(pathName) {
-        return model.toggleCategory(pathName);
-      },
-      onMoreInfo: setMoreInfo,
-      drawerPosition: drawerPosition
-    };
-  }, [view, model, drawerPosition]);
-  var treeWalker = React.useCallback( /*#__PURE__*/runtime_1.mark(function treeWalker() {
-    var i, parentMeta, _i, curr;
-
-    return runtime_1.wrap(function treeWalker$(_context) {
-      while (1) {
-        switch (_context.prev = _context.next) {
-          case 0:
-            i = 0;
-
-          case 1:
-            if (!(i < tree.children.length)) {
-              _context.next = 7;
-              break;
-            }
-
-            _context.next = 4;
-            return getNodeData(tree.children[i], 0, extra);
-
-          case 4:
-            i++;
-            _context.next = 1;
-            break;
-
-          case 7:
-
-            _context.next = 10;
-            return;
-
-          case 10:
-            parentMeta = _context.sent;
-            _i = 0;
-
-          case 12:
-            if (!(_i < parentMeta.node.children.length)) {
-              _context.next = 19;
-              break;
-            }
-
-            curr = parentMeta.node.children[_i];
-            _context.next = 16;
-            return getNodeData(curr, parentMeta.nestingLevel + 1, extra);
-
-          case 16:
-            _i++;
-            _context.next = 12;
-            break;
-
-          case 19:
-            _context.next = 7;
-            break;
-
-          case 21:
-          case "end":
-            return _context.stop();
-        }
-      }
-    }, treeWalker);
-  }), [tree, extra]);
-  var conf = info === null || info === void 0 ? void 0 : info.conf;
-  var menuItems = conf && ((_session$getTrackActi = session.getTrackActionMenuItems) === null || _session$getTrackActi === void 0 ? void 0 : _session$getTrackActi.call(session, conf)) || [];
-  React.useEffect(function () {
-    treeRef.current.recomputeTree({
-      refreshNodes: true,
-      useDefaultHeight: true
-    });
-  }, [tree, filterText]);
-  return /*#__PURE__*/React__default.createElement(React__default.Fragment, null, /*#__PURE__*/React__default.createElement(reactVtree.VariableSizeTree, {
-    ref: treeRef,
-    treeWalker: treeWalker,
-    height: height
-  }, Node), /*#__PURE__*/React__default.createElement(JBrowseMenu, {
-    anchorEl: info === null || info === void 0 ? void 0 : info.target,
-    menuItems: menuItems,
-    onMenuItemClick: function onMenuItemClick(_event, callback) {
-      callback();
-      setMoreInfo(undefined);
-    },
-    open: Boolean(info),
-    onClose: function onClose() {
-      return setMoreInfo(undefined);
-    }
-  }));
-}); // Don't use autosizer in jest and instead hardcode a height, otherwise fails
-// jest tests
-
-var AutoSizedHierarchicalTree = function AutoSizedHierarchicalTree(_ref2) {
-  var tree = _ref2.tree,
-      model = _ref2.model,
-      offset = _ref2.offset;
-  return typeof jest === 'undefined' ? /*#__PURE__*/React__default.createElement(AutoSizer, {
-    disableWidth: true
-  }, function (_ref3) {
-    var height = _ref3.height;
-    return /*#__PURE__*/React__default.createElement(HierarchicalTree, {
-      height: height - offset,
-      model: model,
-      tree: tree
-    });
-  }) : /*#__PURE__*/React__default.createElement(HierarchicalTree, {
-    height: 9000,
-    model: model,
-    tree: tree
-  });
-};
-
-var Wrapper = function Wrapper(_ref4) {
-  var overrideDimensions = _ref4.overrideDimensions,
-      children = _ref4.children;
-  return overrideDimensions ? /*#__PURE__*/React__default.createElement("div", {
-    style: _objectSpread2({}, overrideDimensions)
-  }, children) : /*#__PURE__*/React__default.createElement(React__default.Fragment, null, children);
-};
-
-var HierarchicalTrackSelectorContainer = /*#__PURE__*/mobxReact.observer(function (_ref5) {
-  var model = _ref5.model,
-      toolbarHeight = _ref5.toolbarHeight,
-      overrideDimensions = _ref5.overrideDimensions;
-  var classes = useStyles$7();
-  var session = util.getSession(model);
-
-  var _useState3 = React.useState(null),
-      _useState4 = _slicedToArray(_useState3, 2),
-      anchorEl = _useState4[0],
-      setAnchorEl = _useState4[1];
-
-  function handleFabClose() {
-    setAnchorEl(null);
-  }
-
-  return /*#__PURE__*/React__default.createElement(Wrapper, {
-    overrideDimensions: overrideDimensions
-  }, /*#__PURE__*/React__default.createElement(HierarchicalTrackSelector, {
-    model: model,
-    toolbarHeight: toolbarHeight,
-    overrideDimensions: overrideDimensions
-  }), session.addConnectionConf || session.addTrackConf ? /*#__PURE__*/React__default.createElement(React__default.Fragment, null, /*#__PURE__*/React__default.createElement(core.Fab, {
-    color: "secondary",
-    className: classes.fab,
-    onClick: function onClick(event) {
-      setAnchorEl(event.currentTarget);
-    }
-  }, /*#__PURE__*/React__default.createElement(AddIcon, null)), /*#__PURE__*/React__default.createElement(core.Menu, {
-    anchorEl: anchorEl,
-    open: Boolean(anchorEl),
-    onClose: function onClose() {
-      return setAnchorEl(null);
-    }
-  }, session.addConnectionConf ? /*#__PURE__*/React__default.createElement(core.MenuItem, {
-    onClick: function onClick() {
-      handleFabClose();
-      var widget = session.addWidget('AddConnectionWidget', 'addConnectionWidget');
-      session.showWidget(widget);
-    }
-  }, "Add connection") : null, session.addTrackConf ? /*#__PURE__*/React__default.createElement(core.MenuItem, {
-    onClick: function onClick() {
-      handleFabClose();
-      var widget = session.addWidget('AddTrackWidget', 'addTrackWidget', {
-        view: model.view.id
-      });
-      session.showWidget(widget);
-    }
-  }, "Add track") : null)) : null);
-});
-var HierarchicalTrackSelectorHeader = /*#__PURE__*/mobxReact.observer(function (_ref6) {
-  var model = _ref6.model,
-      setHeaderHeight = _ref6.setHeaderHeight,
-      setAssemblyIdx = _ref6.setAssemblyIdx,
-      assemblyIdx = _ref6.assemblyIdx;
-  var classes = useStyles$7();
-  var session = util.getSession(model);
-
-  var _useState5 = React.useState(),
-      _useState6 = _slicedToArray(_useState5, 2),
-      connectionAnchorEl = _useState6[0],
-      setConnectionAnchorEl = _useState6[1];
-
-  var _useState7 = React.useState(),
-      _useState8 = _slicedToArray(_useState7, 2),
-      menuAnchorEl = _useState8[0],
-      setMenuAnchorEl = _useState8[1];
-
-  var _useState9 = React.useState(),
-      _useState10 = _slicedToArray(_useState9, 2),
-      modalInfo = _useState10[0],
-      setModalInfo = _useState10[1];
-
-  var _useState11 = React.useState(),
-      _useState12 = _slicedToArray(_useState11, 2),
-      deleteDialogDetails = _useState12[0],
-      setDeleteDialogDetails = _useState12[1];
-
-  var _useState13 = React.useState(false),
-      _useState14 = _slicedToArray(_useState13, 2),
-      connectionManagerOpen = _useState14[0],
-      setConnectionManagerOpen = _useState14[1];
-
-  var _useState15 = React.useState(false),
-      _useState16 = _slicedToArray(_useState15, 2),
-      connectionToggleOpen = _useState16[0],
-      setConnectionToggleOpen = _useState16[1];
-
-  var assemblyNames = model.assemblyNames;
-  var assemblyName = assemblyNames[assemblyIdx];
-
-  function breakConnection(connectionConf, deletingConnection) {
-    var name = configuration.readConfObject(connectionConf, 'name');
-    var result = session.prepareToBreakConnection(connectionConf);
-
-    if (result) {
-      var _result = _slicedToArray(result, 2),
-          safelyBreakConnection = _result[0],
-          dereferenceTypeCount = _result[1];
-
-      if (Object.keys(dereferenceTypeCount).length > 0) {
-        setModalInfo({
-          connectionConf: connectionConf,
-          safelyBreakConnection: safelyBreakConnection,
-          dereferenceTypeCount: dereferenceTypeCount,
-          name: name
-        });
-      } else {
-        safelyBreakConnection();
-      }
-    }
-
-    if (deletingConnection) {
-      setDeleteDialogDetails({
-        name: name,
-        connectionConf: connectionConf
-      });
-    }
-  }
-
-  var connectionMenuItems = [{
-    label: 'Turn on/off connections...',
-    onClick: function onClick() {
-      return setConnectionToggleOpen(true);
-    }
-  }];
-
-  if (session.addConnectionConf) {
-    connectionMenuItems.unshift({
-      label: 'Add connection',
-      onClick: function onClick() {
-        session.showWidget(session.addWidget('AddConnectionWidget', 'addConnectionWidget'));
-      }
-    });
-    connectionMenuItems.push({
-      label: 'Delete connections...',
-      onClick: function onClick() {
-        return setConnectionManagerOpen(true);
-      }
-    });
-  }
-
-  var assemblyMenuItems = assemblyNames.length > 1 ? [{
-    label: 'Select assembly...',
-    subMenu: assemblyNames.map(function (name, idx) {
-      return {
-        label: name,
-        onClick: function onClick() {
-          setAssemblyIdx(idx);
-        }
-      };
-    })
-  }] : [];
-  var menuItems = [{
-    label: 'Add track...',
-    onClick: function onClick() {
-      session.showWidget(session.addWidget('AddTrackWidget', 'addTrackWidget', {
-        view: model.view.id
-      }));
-    }
-  }].concat(assemblyMenuItems);
-  return /*#__PURE__*/React__default.createElement("div", {
-    ref: function ref(_ref7) {
-      return setHeaderHeight((_ref7 === null || _ref7 === void 0 ? void 0 : _ref7.getBoundingClientRect().height) || 0);
-    },
-    "data-testid": "hierarchical_track_selector"
-  }, /*#__PURE__*/React__default.createElement("div", {
-    style: {
-      display: 'flex'
-    }
-  }, session.addTrackConf && /*#__PURE__*/React__default.createElement(core.IconButton, {
-    className: classes.menuIcon,
-    onClick: function onClick(event) {
-      setMenuAnchorEl(event.currentTarget);
-    }
-  }, /*#__PURE__*/React__default.createElement(MenuIcon, null)), session.makeConnection && /*#__PURE__*/React__default.createElement(core.IconButton, {
-    className: classes.menuIcon,
-    onClick: function onClick(event) {
-      setConnectionAnchorEl(event.currentTarget);
-    }
-  }, /*#__PURE__*/React__default.createElement(Icons.Cable, null)), /*#__PURE__*/React__default.createElement(core.TextField, {
-    className: classes.searchBox,
-    label: "Filter tracks",
-    value: model.filterText,
-    onChange: function onChange(event) {
-      return model.setFilterText(event.target.value);
-    },
-    fullWidth: true,
-    InputProps: {
-      endAdornment: /*#__PURE__*/React__default.createElement(core.InputAdornment, {
-        position: "end"
-      }, /*#__PURE__*/React__default.createElement(core.IconButton, {
-        color: "secondary",
-        onClick: model.clearFilterText
-      }, /*#__PURE__*/React__default.createElement(ClearIcon, null)))
-    }
-  })), /*#__PURE__*/React__default.createElement(JBrowseMenu, {
-    anchorEl: connectionAnchorEl,
-    open: Boolean(connectionAnchorEl),
-    onMenuItemClick: function onMenuItemClick(_, callback) {
-      callback();
-      setConnectionAnchorEl(undefined);
-    },
-    onClose: function onClose() {
-      return setConnectionAnchorEl(undefined);
-    },
-    menuItems: connectionMenuItems
-  }), /*#__PURE__*/React__default.createElement(JBrowseMenu, {
-    anchorEl: menuAnchorEl,
-    open: Boolean(menuAnchorEl),
-    onMenuItemClick: function onMenuItemClick(_, callback) {
-      callback();
-      setMenuAnchorEl(undefined);
-    },
-    onClose: function onClose() {
-      return setMenuAnchorEl(undefined);
-    },
-    menuItems: menuItems
-  }), /*#__PURE__*/React__default.createElement(React.Suspense, {
-    fallback: /*#__PURE__*/React__default.createElement("div", null)
-  }, modalInfo ? /*#__PURE__*/React__default.createElement(CloseConnectionDialog, {
-    modalInfo: modalInfo,
-    setModalInfo: setModalInfo,
-    session: session
-  }) : deleteDialogDetails ? /*#__PURE__*/React__default.createElement(DeleteConnectionDialog, {
-    handleClose: function handleClose() {
-      return setDeleteDialogDetails(undefined);
-    },
-    deleteDialogDetails: deleteDialogDetails,
-    session: session
-  }) : null, connectionManagerOpen ? /*#__PURE__*/React__default.createElement(ManageConnectionsDialog, {
-    handleClose: function handleClose() {
-      return setConnectionManagerOpen(false);
-    },
-    breakConnection: breakConnection,
-    session: session
-  }) : null, connectionToggleOpen ? /*#__PURE__*/React__default.createElement(ToggleConnectionsDialog, {
-    handleClose: function handleClose() {
-      return setConnectionToggleOpen(false);
-    },
-    session: session,
-    breakConnection: breakConnection,
-    assemblyName: assemblyName
-  }) : null));
-});
-var HierarchicalTrackSelector = /*#__PURE__*/mobxReact.observer(function (_ref8) {
-  var model = _ref8.model,
-      _ref8$toolbarHeight = _ref8.toolbarHeight,
-      toolbarHeight = _ref8$toolbarHeight === void 0 ? 0 : _ref8$toolbarHeight;
-
-  var _useState17 = React.useState(0),
-      _useState18 = _slicedToArray(_useState17, 2),
-      assemblyIdx = _useState18[0],
-      setAssemblyIdx = _useState18[1];
-
-  var _useState19 = React.useState(0),
-      _useState20 = _slicedToArray(_useState19, 2),
-      headerHeight = _useState20[0],
-      setHeaderHeight = _useState20[1];
-
-  var assemblyNames = model.assemblyNames;
-  var assemblyName = assemblyNames[assemblyIdx];
-  return assemblyName ? /*#__PURE__*/React__default.createElement(React__default.Fragment, null, /*#__PURE__*/React__default.createElement(HierarchicalTrackSelectorHeader, {
-    model: model,
-    setHeaderHeight: setHeaderHeight,
-    setAssemblyIdx: setAssemblyIdx,
-    assemblyIdx: assemblyIdx
-  }), /*#__PURE__*/React__default.createElement(AutoSizedHierarchicalTree, {
-    tree: model.hierarchy(assemblyName),
-    model: model,
-    offset: toolbarHeight + headerHeight
-  })) : null;
-});
-
-var HierarchicalTrackSelector$1 = {
-  __proto__: null,
-  'default': HierarchicalTrackSelectorContainer
-};
-
-var useStyles$8 = /*#__PURE__*/core.makeStyles(function (theme) {
-  return {
-    spacing: {
-      marginBottom: theme.spacing(3)
-    }
-  };
-});
-
-function StatusMessage(_ref) {
-  var _trackAdapter$subadap;
-
-  var trackAdapter = _ref.trackAdapter,
-      trackType = _ref.trackType;
-  var classes = useStyles$8();
-  return trackAdapter.type === 'SNPCoverageAdapter' ? /*#__PURE__*/React__default.createElement(core.Typography, {
-    className: classes.spacing
-  }, "Selected ", /*#__PURE__*/React__default.createElement("code", null, trackType), ". Using adapter", ' ', /*#__PURE__*/React__default.createElement("code", null, trackAdapter.type), " with subadapter", ' ', /*#__PURE__*/React__default.createElement("code", null, (_trackAdapter$subadap = trackAdapter.subadapter) === null || _trackAdapter$subadap === void 0 ? void 0 : _trackAdapter$subadap.type), ". Please enter a track name and, if necessary, update the track type.") : /*#__PURE__*/React__default.createElement(core.Typography, {
-    className: classes.spacing
-  }, "Using adapter ", /*#__PURE__*/React__default.createElement("code", null, trackAdapter.type), " and guessing track type", ' ', /*#__PURE__*/React__default.createElement("code", null, trackType), ". Please enter a track name and, if necessary, update the track type.");
-}
-/**
- * categorizeAdapters takes a list of adapters and sorts their menu item elements under an appropriate ListSubheader
- *  element. In this way, adapters that are from external plugins can have headers that differentiate them from the
- *  out-of-the-box plugins.
- * @param adaptersList - a list of adapters found in the PluginManager
- * @returns a series of JSX elements that are ListSubheaders followed by the adapters
- *   found under that subheader
- */
-
-
-function categorizeAdapters(adaptersList) {
-  var currentCategory = ''; // eslint-disable-next-line @typescript-eslint/no-explicit-any
-
-  var items = [];
-  adaptersList.forEach(function (adapter) {
-    var _adapter$adapterMetad;
-
-    if ((_adapter$adapterMetad = adapter.adapterMetadata) !== null && _adapter$adapterMetad !== void 0 && _adapter$adapterMetad.category) {
-      var _adapter$adapterMetad2, _adapter$adapterMetad7, _adapter$adapterMetad8;
-
-      if (currentCategory !== ((_adapter$adapterMetad2 = adapter.adapterMetadata) === null || _adapter$adapterMetad2 === void 0 ? void 0 : _adapter$adapterMetad2.category)) {
-        var _adapter$adapterMetad3, _adapter$adapterMetad4, _adapter$adapterMetad5, _adapter$adapterMetad6;
-
-        currentCategory = (_adapter$adapterMetad3 = adapter.adapterMetadata) === null || _adapter$adapterMetad3 === void 0 ? void 0 : _adapter$adapterMetad3.category;
-        items.push( /*#__PURE__*/React__default.createElement(core.ListSubheader, {
-          key: (_adapter$adapterMetad4 = adapter.adapterMetadata) === null || _adapter$adapterMetad4 === void 0 ? void 0 : _adapter$adapterMetad4.category,
-          value: (_adapter$adapterMetad5 = adapter.adapterMetadata) === null || _adapter$adapterMetad5 === void 0 ? void 0 : _adapter$adapterMetad5.category
-        }, (_adapter$adapterMetad6 = adapter.adapterMetadata) === null || _adapter$adapterMetad6 === void 0 ? void 0 : _adapter$adapterMetad6.category));
-      }
-
-      items.push( /*#__PURE__*/React__default.createElement(core.MenuItem, {
-        key: adapter.name,
-        value: adapter.name
-      }, (_adapter$adapterMetad7 = adapter.adapterMetadata) !== null && _adapter$adapterMetad7 !== void 0 && _adapter$adapterMetad7.displayName ? (_adapter$adapterMetad8 = adapter.adapterMetadata) === null || _adapter$adapterMetad8 === void 0 ? void 0 : _adapter$adapterMetad8.displayName : adapter.name));
-    }
-  });
-  return items;
-}
-
-function getAdapterTypes(pluginManager) {
-  return pluginManager.getElementTypesInGroup('adapter');
-}
-
-function getTrackTypes(pluginManager) {
-  return pluginManager.getElementTypesInGroup('track');
-}
-
-var TrackAdapterSelector = /*#__PURE__*/mobxReact.observer(function (_ref2) {
-  var model = _ref2.model;
-  var classes = useStyles$8();
-  var session = util.getSession(model);
-  var trackAdapter = model.trackAdapter; // prettier-ignore
-
-  var adapters = getAdapterTypes(mobxStateTree.getEnv(session).pluginManager);
-  return /*#__PURE__*/React__default.createElement(core.TextField, {
-    className: classes.spacing,
-    value: (trackAdapter === null || trackAdapter === void 0 ? void 0 : trackAdapter.type) !== 'UNKNOWN' ? trackAdapter === null || trackAdapter === void 0 ? void 0 : trackAdapter.type : '',
-    label: "adapterType",
-    helperText: "Select an adapter type",
-    select: true,
-    fullWidth: true,
-    onChange: function onChange(event) {
-      model.setAdapterHint(event.target.value);
-    },
-    SelectProps: {
-      // @ts-ignore
-      SelectDisplayProps: {
-        'data-testid': 'adapterTypeSelect'
-      }
-    }
-  }, adapters // Excludes any adapter with the 'adapterMetadata.hiddenFromGUI' property, and anything with the 'adapterMetadata.category' property
-  .filter(function (elt) {
-    var _elt$adapterMetadata, _elt$adapterMetadata2;
-
-    return !((_elt$adapterMetadata = elt.adapterMetadata) !== null && _elt$adapterMetadata !== void 0 && _elt$adapterMetadata.hiddenFromGUI) && !((_elt$adapterMetadata2 = elt.adapterMetadata) !== null && _elt$adapterMetadata2 !== void 0 && _elt$adapterMetadata2.category);
-  }).map(function (elt) {
-    var _elt$adapterMetadata3, _elt$adapterMetadata4;
-
-    return /*#__PURE__*/React__default.createElement(core.MenuItem, {
-      key: elt.name,
-      value: elt.name
-    }, (_elt$adapterMetadata3 = elt.adapterMetadata) !== null && _elt$adapterMetadata3 !== void 0 && _elt$adapterMetadata3.displayName ? (_elt$adapterMetadata4 = elt.adapterMetadata) === null || _elt$adapterMetadata4 === void 0 ? void 0 : _elt$adapterMetadata4.displayName : elt.name);
-  }), categorizeAdapters(adapters.filter(function (elt) {
-    var _elt$adapterMetadata5;
-
-    return !((_elt$adapterMetadata5 = elt.adapterMetadata) !== null && _elt$adapterMetadata5 !== void 0 && _elt$adapterMetadata5.hiddenFromGUI);
-  })));
-});
-
-function UnknownAdapterPrompt(_ref3) {
-  var model = _ref3.model;
-  var classes = useStyles$8();
-  return /*#__PURE__*/React__default.createElement(React__default.Fragment, null, /*#__PURE__*/React__default.createElement(core.Typography, {
-    className: classes.spacing
-  }, "JBrowse was not able to guess the adapter type for this data, but it may be in the list below. If not, you can", ' ', /*#__PURE__*/React__default.createElement(core.Link, {
-    href: "https://github.com/GMOD/jbrowse-components/releases",
-    target: "_blank",
-    rel: "noopener noreferrer"
-  }, "check for new releases"), ' ', "of JBrowse to see if they support this data type or", ' ', /*#__PURE__*/React__default.createElement(core.Link, {
-    href: "https://github.com/GMOD/jbrowse-components/issues/new",
-    target: "_blank",
-    rel: "noopener noreferrer"
-  }, "file an issue"), ' ', "and add a feature request for this data type."), /*#__PURE__*/React__default.createElement(TrackAdapterSelector, {
-    model: model
-  }));
-}
-
-var TrackTypeSelector = /*#__PURE__*/mobxReact.observer(function (_ref4) {
-  var model = _ref4.model;
-  var classes = useStyles$8();
-  var session = util.getSession(model);
-  var trackType = model.trackType;
-  var trackTypes = getTrackTypes(mobxStateTree.getEnv(session).pluginManager);
-  return /*#__PURE__*/React__default.createElement(core.TextField, {
-    className: classes.spacing,
-    value: trackType,
-    label: "trackType",
-    helperText: "Select a track type",
-    select: true,
-    fullWidth: true,
-    onChange: function onChange(event) {
-      model.setTrackType(event.target.value);
-    },
-    SelectProps: {
-      // @ts-ignore
-      SelectDisplayProps: {
-        'data-testid': 'trackTypeSelect'
-      }
-    }
-  }, trackTypes.map(function (_ref5) {
-    var name = _ref5.name;
-    return /*#__PURE__*/React__default.createElement(core.MenuItem, {
-      key: name,
-      value: name
-    }, name);
-  }));
-});
-var TrackAssemblySelector = /*#__PURE__*/mobxReact.observer(function (_ref6) {
-  var model = _ref6.model;
-  var session = util.getSession(model);
-  var assembly = model.assembly;
-  return /*#__PURE__*/React__default.createElement(core.TextField, {
-    value: assembly,
-    label: "assemblyName",
-    helperText: "Assembly to which the track will be added",
-    select: true,
-    fullWidth: true,
-    onChange: function onChange(event) {
-      return model.setAssembly(event.target.value);
-    },
-    SelectProps: {
-      // @ts-ignore
-      SelectDisplayProps: {
-        'data-testid': 'assemblyNameSelect'
-      }
-    }
-  }, session.assemblies.map(function (conf) {
-    return configuration.readConfObject(conf, 'name');
-  }).map(function (name) {
-    return /*#__PURE__*/React__default.createElement(core.MenuItem, {
-      key: name,
-      value: name
-    }, name);
-  }));
-});
-
-function ConfirmTrack(_ref7) {
-  var model = _ref7.model;
-  var classes = useStyles$8();
-  var trackName = model.trackName,
-      trackAdapter = model.trackAdapter,
-      trackType = model.trackType,
-      warningMessage = model.warningMessage,
-      adapterHint = model.adapterHint;
-
-  if (model.unsupported) {
-    return /*#__PURE__*/React__default.createElement(core.Typography, {
-      className: classes.spacing
-    }, "This version of JBrowse cannot display data of this type. It is possible, however, that there is a newer version that can display them. You can", ' ', /*#__PURE__*/React__default.createElement(core.Link, {
-      href: "https://github.com/GMOD/jbrowse-components/releases",
-      target: "_blank",
-      rel: "noopener noreferrer"
-    }, "check for new releases"), ' ', "of JBrowse or", ' ', /*#__PURE__*/React__default.createElement(core.Link, {
-      href: "https://github.com/GMOD/jbrowse-components/issues/new",
-      target: "_blank",
-      rel: "noopener noreferrer"
-    }, "file an issue"), ' ', "and add a feature request for this data type.");
-  }
-
-  if ((trackAdapter === null || trackAdapter === void 0 ? void 0 : trackAdapter.type) === tracks.UNKNOWN) {
-    return /*#__PURE__*/React__default.createElement(UnknownAdapterPrompt, {
-      model: model
-    });
-  }
-
-  if (adapterHint === '' && trackAdapter) {
-    model.setAdapterHint(trackAdapter.type);
-  }
-
-  if (!(trackAdapter !== null && trackAdapter !== void 0 && trackAdapter.type)) {
-    return /*#__PURE__*/React__default.createElement(core.Typography, null, "Could not recognize this data type.");
-  }
-
-  return /*#__PURE__*/React__default.createElement("div", null, trackAdapter ? /*#__PURE__*/React__default.createElement(StatusMessage, {
-    trackAdapter: trackAdapter,
-    trackType: trackType
-  }) : null, warningMessage ? /*#__PURE__*/React__default.createElement(core.Typography, {
-    style: {
-      color: 'orange'
-    }
-  }, warningMessage) : null, /*#__PURE__*/React__default.createElement(core.TextField, {
-    className: classes.spacing,
-    label: "trackName",
-    helperText: "A name for this track",
-    fullWidth: true,
-    value: trackName,
-    onChange: function onChange(event) {
-      return model.setTrackName(event.target.value);
-    },
-    inputProps: {
-      'data-testid': 'trackNameInput'
-    }
-  }), /*#__PURE__*/React__default.createElement(TrackAdapterSelector, {
-    model: model
-  }), /*#__PURE__*/React__default.createElement(TrackTypeSelector, {
-    model: model
-  }), /*#__PURE__*/React__default.createElement(TrackAssemblySelector, {
-    model: model
-  }));
-}
-
-var ConfirmTrack$1 = /*#__PURE__*/mobxReact.observer(ConfirmTrack);
-
-var useStyles$9 = /*#__PURE__*/core.makeStyles(function (theme) {
-  return {
-    paper: {
-      display: 'flex',
-      flexDirection: 'column',
-      padding: theme.spacing(1)
-    },
-    spacer: {
-      height: theme.spacing(8)
-    }
-  };
-});
-
-function TrackSourceSelect(_ref) {
-  var model = _ref.model;
-  var classes = useStyles$9();
-  var rootModel = mobxStateTree.getRoot(model);
-  return /*#__PURE__*/React__default.createElement(core.Paper, {
-    className: classes.paper
-  }, /*#__PURE__*/React__default.createElement(ui.FileSelector, {
-    name: "Main file",
-    description: "",
-    location: model.trackData,
-    setLocation: model.setTrackData,
-    setName: model.setTrackName,
-    rootModel: rootModel
-  }), /*#__PURE__*/React__default.createElement("div", {
-    className: classes.spacer
-  }), /*#__PURE__*/React__default.createElement(ui.FileSelector, {
-    name: "Index file",
-    description: "(Optional) The URL of the index file is automatically inferred from the URL of the main file if it is not supplied.",
-    location: model.indexTrackData,
-    setLocation: model.setIndexTrackData,
-    setName: model.setTrackName,
-    rootModel: rootModel
-  }));
-}
-
-var TrackSourceSelect$1 = /*#__PURE__*/mobxReact.observer(TrackSourceSelect);
-
-var useStyles$a = /*#__PURE__*/core.makeStyles(function (theme) {
-  return {
-    root: {
-      marginTop: theme.spacing(1)
-    },
-    stepper: {
-      backgroundColor: theme.palette.background["default"]
-    },
-    button: {
-      marginTop: theme.spacing(1),
-      marginRight: theme.spacing(1)
-    },
-    actionsContainer: {
-      marginBottom: theme.spacing(2)
-    },
-    stepContent: {
-      margin: theme.spacing(1)
-    },
-    alertContainer: {
-      padding: "".concat(theme.spacing(2), "px 0px ").concat(theme.spacing(2), "px 0px")
-    }
-  };
-});
-var steps = ['Enter track data', 'Confirm track type'];
-
-function AddTrackWidget(_ref) {
-  var model = _ref.model;
-
-  var _useState = React.useState(0),
-      _useState2 = _slicedToArray(_useState, 2),
-      activeStep = _useState2[0],
-      setActiveStep = _useState2[1];
-
-  var classes = useStyles$a();
-  var session = util.getSession(model);
-  var assembly = model.assembly,
-      trackAdapter = model.trackAdapter,
-      trackData = model.trackData,
-      trackName = model.trackName,
-      trackType = model.trackType;
-
-  var _useState3 = React.useState(),
-      _useState4 = _slicedToArray(_useState3, 2),
-      trackErrorMessage = _useState4[0],
-      setTrackErrorMessage = _useState4[1];
-
-  function getStepContent(step) {
-    switch (step) {
-      case 0:
-        return /*#__PURE__*/React__default.createElement(TrackSourceSelect$1, {
-          model: model
-        });
-
-      case 1:
-        return /*#__PURE__*/React__default.createElement(ConfirmTrack$1, {
-          model: model
-        });
-
-      default:
-        return /*#__PURE__*/React__default.createElement(core.Typography, null, "Unknown step");
-    }
-  }
-
-  function handleNext() {
-    return _handleNext.apply(this, arguments);
-  }
-
-  function _handleNext() {
-    _handleNext = _asyncToGenerator( /*#__PURE__*/runtime_1.mark(function _callee() {
-      var trackId, assemblyInstance;
-      return runtime_1.wrap(function _callee$(_context) {
-        while (1) {
-          switch (_context.prev = _context.next) {
-            case 0:
-              if (!(activeStep !== steps.length - 1)) {
-                _context.next = 3;
-                break;
-              }
-
-              setActiveStep(activeStep + 1);
-              return _context.abrupt("return");
-
-            case 3:
-              trackId = "".concat(trackName.toLowerCase().replace(/ /g, '_'), "-").concat(Date.now()).concat(session.adminMode ? '' : '-sessionTrack');
-              assemblyInstance = session.assemblyManager.get(assembly);
-
-              if (trackAdapter && trackAdapter.type !== 'UNKNOWN') {
-                // @ts-ignore
-                session.addTrackConf({
-                  trackId: trackId,
-                  type: trackType,
-                  name: trackName,
-                  assemblyNames: [assembly],
-                  adapter: _objectSpread2(_objectSpread2({}, trackAdapter), {}, {
-                    sequenceAdapter: configuration.getConf(assemblyInstance, ['sequence', 'adapter'])
-                  })
-                });
-
-                if (model.view) {
-                  model.view.showTrack(trackId);
-                } else {
-                  session.notify('Open a new view, or use the track selector in an existing view, to view this track', 'info');
-                }
-
-                model.clearData(); // @ts-ignore
-
-                session.hideWidget(model);
-              } else {
-                setTrackErrorMessage('Failed to add track.\nThe configuration of this file is not currently supported.');
-              }
-
-            case 6:
-            case "end":
-              return _context.stop();
-          }
-        }
-      }, _callee);
-    }));
-    return _handleNext.apply(this, arguments);
-  }
-
-  function handleBack() {
-    setTrackErrorMessage(undefined);
-    setActiveStep(activeStep - 1);
-  }
-
-  function isNextDisabled() {
-    switch (activeStep) {
-      case 0:
-        return !trackData;
-
-      case 1:
-        return !(trackName && trackType && trackAdapter !== null && trackAdapter !== void 0 && trackAdapter.type && assembly);
-
-      default:
-        return true;
-    }
-  }
-
-  return /*#__PURE__*/React__default.createElement("div", {
-    className: classes.root
-  }, /*#__PURE__*/React__default.createElement(core.Stepper, {
-    className: classes.stepper,
-    activeStep: activeStep,
-    orientation: "vertical"
-  }, steps.map(function (label, idx) {
-    return /*#__PURE__*/React__default.createElement(core.Step, {
-      key: label
-    }, /*#__PURE__*/React__default.createElement(core.StepLabel, null, label), /*#__PURE__*/React__default.createElement(core.StepContent, null, getStepContent(idx), /*#__PURE__*/React__default.createElement("div", {
-      className: classes.actionsContainer
-    }, /*#__PURE__*/React__default.createElement(core.Button, {
-      disabled: activeStep === 0,
-      onClick: handleBack,
-      className: classes.button
-    }, "Back"), /*#__PURE__*/React__default.createElement(core.Button, {
-      disabled: isNextDisabled(),
-      variant: "contained",
-      color: "primary",
-      onClick: handleNext,
-      className: classes.button,
-      "data-testid": "addTrackNextButton"
-    }, activeStep === steps.length - 1 ? 'Add' : 'Next')), trackErrorMessage ? /*#__PURE__*/React__default.createElement("div", {
-      className: classes.alertContainer
-    }, /*#__PURE__*/React__default.createElement(lab.Alert, {
-      severity: "error"
-    }, trackErrorMessage)) : null));
-  })));
-}
-
-var AddTrackWidget$1 = /*#__PURE__*/mobxReact.observer(AddTrackWidget);
-
-var AddTrackWidget$2 = {
-  __proto__: null,
-  'default': AddTrackWidget$1
-};
-
-var ConfigureConnection = /*#__PURE__*/mobxReact.observer(function (props) {
-  var connectionType = props.connectionType,
-      model = props.model,
-      setModelReady = props.setModelReady;
-  var ConfigEditorComponent = connectionType.configEditorComponent || pluginConfig.ConfigurationEditor;
-  return /*#__PURE__*/React__default.createElement(React.Suspense, {
-    fallback: /*#__PURE__*/React__default.createElement("div", null, "Loading...")
-  }, /*#__PURE__*/React__default.createElement(ConfigEditorComponent, {
-    model: {
-      target: model
-    },
-    setModelReady: setModelReady
-  }));
-});
-
-function ConnectionTypeSelect(props) {
-  var connectionTypeChoices = props.connectionTypeChoices,
-      connectionType = props.connectionType,
-      setConnectionType = props.setConnectionType;
-  React.useEffect(function () {
-    if (!connectionType.name) {
-      setConnectionType(connectionTypeChoices[0]);
-    }
-  });
-
-  function handleChange(event) {
-    setConnectionType(connectionTypeChoices.find(function (connectionTypeChoice) {
-      return connectionTypeChoice.name === event.target.value;
-    }));
-  }
-
-  if (!connectionType.name) {
-    return null;
-  }
-
-  return /*#__PURE__*/React__default.createElement("form", {
-    autoComplete: "off"
-  }, /*#__PURE__*/React__default.createElement(TextField, {
-    value: connectionType.name,
-    label: "connectionType",
-    helperText: connectionType.description ? /*#__PURE__*/React__default.createElement(React__default.Fragment, null, connectionType.description, connectionType.url ? /*#__PURE__*/React__default.createElement(IconButton, {
-      href: connectionType.url,
-      rel: "noopener noreferrer",
-      target: "_blank",
-      color: "secondary"
-    }, /*#__PURE__*/React__default.createElement(OpenInNewIcon, null)) : null) : null,
-    select: true,
-    fullWidth: true,
-    onChange: handleChange,
-    variant: "outlined"
-  }, connectionTypeChoices.map(function (connectionTypeChoice) {
-    return /*#__PURE__*/React__default.createElement(MenuItem, {
-      key: connectionTypeChoice.name,
-      value: connectionTypeChoice.name
-    }, connectionTypeChoice.displayName || connectionTypeChoice.name);
-  })));
-}
-
-var useStyles$b = /*#__PURE__*/styles.makeStyles(function (theme) {
-  return {
-    root: {
-      marginTop: theme.spacing(1)
-    },
-    stepper: {
-      backgroundColor: theme.palette.background["default"]
-    },
-    button: {
-      marginTop: theme.spacing(1),
-      marginRight: theme.spacing(1)
-    },
-    actionsContainer: {
-      marginBottom: theme.spacing(2)
-    }
-  };
-});
-var steps$1 = ['Select a Connection Type', 'Configure Connection'];
-
-function AddConnectionWidget(_ref) {
-  var model = _ref.model;
-
-  var _useState = React.useState({}),
-      _useState2 = _slicedToArray(_useState, 2),
-      connectionType = _useState2[0],
-      setConnectionType = _useState2[1];
-
-  var _useState3 = React.useState({}),
-      _useState4 = _slicedToArray(_useState3, 2),
-      configModel = _useState4[0],
-      setConfigModel = _useState4[1];
-
-  var _useState5 = React.useState(true),
-      _useState6 = _slicedToArray(_useState5, 2),
-      configModelReady = _useState6[0],
-      setConfigModelReady = _useState6[1];
-
-  var _useState7 = React.useState(0),
-      _useState8 = _slicedToArray(_useState7, 2),
-      activeStep = _useState8[0],
-      setActiveStep = _useState8[1];
-
-  var classes = useStyles$b();
-  var session = util.getSession(model);
-
-  var _getEnv = mobxStateTree.getEnv(session),
-      pluginManager = _getEnv.pluginManager;
-
-  function handleSetConnectionType(newConnectionType) {
-    setConnectionType(newConnectionType);
-    setConfigModel(newConnectionType.configSchema.create({
-      connectionId: "".concat(newConnectionType.name, "-").concat(Date.now())
-    }, mobxStateTree.getEnv(model)));
-  }
-
-  function stepContent() {
-    switch (activeStep) {
-      case 0:
-        return /*#__PURE__*/React__default.createElement(ConnectionTypeSelect, {
-          connectionTypeChoices: pluginManager.getElementTypesInGroup('connection'),
-          connectionType: connectionType,
-          setConnectionType: handleSetConnectionType
-        });
-
-      case 1:
-        return /*#__PURE__*/React__default.createElement(ConfigureConnection, {
-          connectionType: connectionType,
-          model: configModel,
-          setModelReady: setConfigModelReady
-        });
-
-      default:
-        return /*#__PURE__*/React__default.createElement(Typography, null, "Unknown step");
-    }
-  }
-
-  function handleNext() {
-    if (activeStep === steps$1.length - 1) {
-      handleFinish();
-    } else {
-      setActiveStep(activeStep + 1);
-    }
-  }
-
-  function handleBack() {
-    setActiveStep(activeStep - 1);
-  }
-
-  function handleFinish() {
-    var connectionConf = session.addConnectionConf(configModel);
-    session.makeConnection(connectionConf);
-    session.hideWidget(model);
-  }
-
-  function checkNextEnabled() {
-    if (activeStep === 0 && connectionType.name || activeStep === 1 && configModel && configModelReady) {
-      return true;
-    }
-
-    return false;
-  }
-
-  return /*#__PURE__*/React__default.createElement("div", {
-    className: classes.root
-  }, /*#__PURE__*/React__default.createElement(Stepper, {
-    className: classes.stepper,
-    activeStep: activeStep,
-    orientation: "vertical"
-  }, steps$1.map(function (label) {
-    return /*#__PURE__*/React__default.createElement(Step, {
-      key: label
-    }, /*#__PURE__*/React__default.createElement(StepLabel, null, label), /*#__PURE__*/React__default.createElement(StepContent, null, stepContent(), /*#__PURE__*/React__default.createElement("div", {
-      className: classes.actionsContainer
-    }, /*#__PURE__*/React__default.createElement(Button, {
-      disabled: activeStep === 0,
-      onClick: handleBack,
-      className: classes.button
-    }, "Back"), /*#__PURE__*/React__default.createElement(Button, {
-      disabled: !checkNextEnabled(),
-      variant: "contained",
-      color: "primary",
-      onClick: handleNext,
-      className: classes.button,
-      "data-testid": "addConnectionNext"
-    }, activeStep === steps$1.length - 1 ? 'Connect' : 'Next'))));
-  })));
-}
-
-AddConnectionWidget.propTypes = {
-  model: mobxReact.PropTypes.observableObject.isRequired
-};
-var AddConnectionWidget$1 = /*#__PURE__*/mobxReact.observer(AddConnectionWidget);
-
-var AddConnectionWidget$2 = {
-  __proto__: null,
-  'default': AddConnectionWidget$1
-};
-
-function CloseConnectionDialog$1(_ref) {
-  var _ref$modalInfo = _ref.modalInfo,
-      modalInfo = _ref$modalInfo === void 0 ? {} : _ref$modalInfo,
-      setModalInfo = _ref.setModalInfo;
-  var name = modalInfo.name,
-      dereferenceTypeCount = modalInfo.dereferenceTypeCount,
-      safelyBreakConnection = modalInfo.safelyBreakConnection;
-  return /*#__PURE__*/React__default.createElement(core.Dialog, {
-    open: true
-  }, /*#__PURE__*/React__default.createElement(core.DialogTitle, null, "Close connection \"", name, "\""), /*#__PURE__*/React__default.createElement(core.DialogContent, null, dereferenceTypeCount ? /*#__PURE__*/React__default.createElement(React__default.Fragment, null, /*#__PURE__*/React__default.createElement(core.DialogContentText, null, "Closing this connection will close:"), /*#__PURE__*/React__default.createElement(core.List, null, Object.entries(dereferenceTypeCount).map(function (_ref2) {
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-    color: "primary"
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-    variant: "contained",
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-      setModalInfo();
-    } : function () {},
-    color: "primary"
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-var CloseConnectionDialog$2 = /*#__PURE__*/mobxReact.observer(CloseConnectionDialog$1);
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-var CloseConnectionDialog$3 = {
-  __proto__: null,
-  'default': CloseConnectionDialog$2
-};
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-function DeleteConnectionDialog$1(_ref) {
-  var deleteDialogDetails = _ref.deleteDialogDetails,
-      session = _ref.session,
-      handleClose = _ref.handleClose;
-  var connectionConf = deleteDialogDetails.connectionConf,
-      name = deleteDialogDetails.name;
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-    open: true
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-    onClick: function onClick() {
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-    color: "primary",
-    onClick: function onClick() {
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-
-        (_session$deleteConnec = session.deleteConnection) === null || _session$deleteConnec === void 0 ? void 0 : _session$deleteConnec.call(session, connectionConf);
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-var DeleteConnectionDialog$2 = /*#__PURE__*/mobxReact.observer(DeleteConnectionDialog$1);
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-var DeleteConnectionDialog$3 = {
-  __proto__: null,
-  'default': DeleteConnectionDialog$2
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-var useStyles$c = /*#__PURE__*/core.makeStyles(function (theme) {
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-    closeButton: {
-      position: 'absolute',
-      right: theme.spacing(1),
-      top: theme.spacing(1),
-      color: theme.palette.grey[500]
-    },
-    connectionContainer: {
-      margin: theme.spacing(4),
-      width: 500
-    }
-  };
-});
-
-function ManageConnectionsDlg(_ref) {
-  var session = _ref.session,
-      handleClose = _ref.handleClose,
-      breakConnection = _ref.breakConnection;
-  var classes = useStyles$c();
-  var adminMode = session.adminMode,
-      connections = session.connections,
-      sessionConnections = session.sessionConnections;
-  return /*#__PURE__*/React__default.createElement(core.Dialog, {
-    open: true,
-    onClose: handleClose,
-    maxWidth: "lg"
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-    className: classes.connectionContainer
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-    var name = configuration.readConfObject(conf, 'name');
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-      key: "conn-".concat(name)
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-      color: "error"
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-      title: "Unable to delete connection in config file as non-admin user"
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-      color: "disabled"
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-    onClick: function onClick() {
-      return handleClose();
-    },
-    variant: "contained",
-    color: "primary"
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-var ManageConnectionsDialog$1 = /*#__PURE__*/mobxReact.observer(ManageConnectionsDlg);
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-var ManageConnectionsDialog$2 = {
-  __proto__: null,
-  'default': ManageConnectionsDialog$1
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-var useStyles$d = /*#__PURE__*/core.makeStyles(function (theme) {
-  return {
-    closeButton: {
-      position: 'absolute',
-      right: theme.spacing(1),
-      top: theme.spacing(1),
-      color: theme.palette.grey[500]
-    },
-    connectionContainer: {
-      width: 500,
-      margin: theme.spacing(4)
-    }
-  };
-});
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-function ToggleConnectionDialog(_ref) {
-  var session = _ref.session,
-      handleClose = _ref.handleClose,
-      assemblyName = _ref.assemblyName,
-      breakConnection = _ref.breakConnection;
-  var classes = useStyles$d();
-  var connections = session.connections,
-      connectionInstances = session.connectionInstances;
-  var assemblySpecificConnections = connections.filter(function (c) {
-    var configAssemblyNames = configuration.readConfObject(c, 'assemblyNames');
-
-    if (configAssemblyNames.length === 0) {
-      return true;
-    }
-
-    return configAssemblyNames.includes(assemblyName);
-  });
-  return /*#__PURE__*/React__default.createElement(core.Dialog, {
-    open: true,
-    onClose: handleClose,
-    maxWidth: "lg"
-  }, /*#__PURE__*/React__default.createElement(core.DialogTitle, null, "Turn on/off connections", /*#__PURE__*/React__default.createElement(core.IconButton, {
-    className: classes.closeButton,
-    onClick: function onClick() {
-      return handleClose();
-    }
-  }, /*#__PURE__*/React__default.createElement(CloseIcon, null))), /*#__PURE__*/React__default.createElement(core.DialogContent, null, /*#__PURE__*/React__default.createElement(core.Typography, null, "Use the checkbox to turn on/off connections"), /*#__PURE__*/React__default.createElement("div", {
-    className: classes.connectionContainer
-  }, assemblySpecificConnections.map(function (conf) {
-    var name = configuration.readConfObject(conf, 'name');
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-      key: conf.connectionId
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-      control: /*#__PURE__*/React__default.createElement(core.Checkbox, {
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-        onChange: function onChange() {
-          if (connectionInstances !== null && connectionInstances !== void 0 && connectionInstances.find(function (conn) {
-            return conn.name === configuration.readConfObject(conf, 'name');
-          })) {
-            breakConnection(conf);
-          } else {
-            var _session$makeConnecti;
-
-            (_session$makeConnecti = session.makeConnection) === null || _session$makeConnecti === void 0 ? void 0 : _session$makeConnecti.call(session, conf);
-          }
-        },
-        color: "primary"
-      }),
-      label: name
-    }));
-  }), !assemblySpecificConnections.length ? /*#__PURE__*/React__default.createElement(core.Typography, null, "No connections found for ", assemblyName) : null)), /*#__PURE__*/React__default.createElement(core.DialogActions, null, /*#__PURE__*/React__default.createElement(core.Button, {
-    onClick: function onClick() {
-      return handleClose();
-    },
-    variant: "contained",
-    color: "primary"
-  }, "Close")));
-}
-
-var ToggleConnectionsDialog$1 = /*#__PURE__*/mobxReact.observer(ToggleConnectionDialog);
-
-var ToggleConnectionsDialog$2 = {
-  __proto__: null,
-  'default': ToggleConnectionsDialog$1
-};
-
-exports.AssemblyManager = AssemblyManager;
-exports.SetDefaultSession = SetDefaultSession;
-exports.default = _default;
-//# sourceMappingURL=plugin-data-management.cjs.development.js.map